F337209

General Info

Members Datasets Scaffolds Average Seq Length
224 102 448 211

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_12412_c1|nmdc:mga05p37_12412_c1_7864_8562
Length 232
Sequence MHIAIRRFTDPIKKEKDMLRSKCIAWPATIGVLIVLGLSNPLEGQVGQSGGLVNPDLASEKELLALPHMNATMVKSIMEQRPFSSISDFHALLSKYLNKEQVAEVYGKAFVQLNLNTAAESEILLIPGVGKRMLHEFQEYRPYKSLAQFRKEIGKYVDQKEVARLEQYVFVPINLNTSVDEDILTIPGMGKRMLREFKEYRPYKNIEQFRKEIGKYVDKKEVARLERYVTLN

Samples

Sample ID Description Type Environment
1 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 3300005277 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 v2 (version 2) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
57 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
58 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
59 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
62 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
63 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
64 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
65 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
66 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
67 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
71 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
72 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
73 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
74 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
75 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
83 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
84 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
85 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
86 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
87 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
88 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
89 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
90 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
96 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
97 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
98 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
99 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
100 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
101 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
102 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.45
Nodule 0
Rhizoplane 0
Rhizosphere 99.55
Stem 0
Stem Tuber 0
Unclassified 39.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga05p37_12412_c1 3300050507 Bacteria 10173
2 SwRhRL3b_contig_2841241 2162886006 Unclassified 1329
3 Ga0065716_1004588 3300005277 Unclassified 987
4 Ga0065715_10468711 3300005293 Bacteria 808
5 Ga0065707_10090607 3300005295 Bacteria 4106
6 Ga0070680_100029914 3300005336 Unclassified 4373
7 Ga0070680_100689502 3300005336 Unclassified 879
8 Ga0070687_100238430 3300005343 Bacteria 1123
9 Ga0070668_100525564 3300005347 Bacteria 1027
10 Ga0070669_100010719 3300005353 Bacteria 6504
11 Ga0070674_100175542 3300005356 Unclassified 1637
12 Ga0070659_100941162 3300005366 Unclassified 756
13 Ga0070701_10105558 3300005438 Bacteria 1567
14 Ga0070705_100441876 3300005440 Unclassified 974
15 Ga0070700_100416733 3300005441 Bacteria 1014
16 Ga0070681_10550783 3300005458 Bacteria 1067
17 Ga0070698_100013775 3300005471 Bacteria 8559
18 Ga0070698_100037721 3300005471 Bacteria 4982
19 Ga0070699_100057862 3300005518 Unclassified 3357
20 Ga0070679_100072901 3300005530 Unclassified 3426
21 Ga0070697_100078728 3300005536 Unclassified 2713
22 Ga0070697_100146548 3300005536 Unclassified 1988
23 Ga0070696_100025940 3300005546 Unclassified 3986
24 Ga0070696_100076790 3300005546 Unclassified 2359
25 Ga0070704_100207644 3300005549 Bacteria 1585
26 Ga0070704_100682162 3300005549 Unclassified 910
27 Ga0068859_100401384 3300005617 Bacteria 1467
28 Ga0068859_100557233 3300005617 Bacteria 1240
29 Ga0068860_100258848 3300005843 Unclassified 1696
30 Ga0081455_10012675 3300005937 Bacteria 8390
31 Ga0075428_100072506 3300006844 Bacteria 3762
32 Ga0075428_100219184 3300006844 Bacteria 2055
33 Ga0075428_100347028 3300006844 Bacteria 1593
34 Ga0075428_100433235 3300006844 Unclassified 1409
35 Ga0075428_101052783 3300006844 Unclassified 860
36 Ga0075430_100021347 3300006846 Bacteria 5504
37 Ga0075430_100046236 3300006846 Bacteria 3676
38 Ga0075430_100049023 3300006846 Bacteria 3565
39 Ga0075430_100117390 3300006846 Unclassified 2218
40 Ga0075430_100202281 3300006846 Bacteria 1649
41 Ga0075430_100241752 3300006846 Unclassified 1496
42 Ga0075430_100278258 3300006846 Unclassified 1385
43 Ga0075430_100317059 3300006846 Bacteria 1289
44 Ga0075430_100376304 3300006846 Unclassified 1172
45 Ga0075430_100585954 3300006846 Bacteria 920
46 Ga0075431_100008938 3300006847 Bacteria 10039
47 Ga0075431_100020394 3300006847 Bacteria 6773
48 Ga0075431_100062093 3300006847 Unclassified 3856
49 Ga0075431_100124877 3300006847 Unclassified 2656
50 Ga0075431_100179649 3300006847 Bacteria 2172
51 Ga0075431_100257501 3300006847 Unclassified 1772
52 Ga0075431_100259150 3300006847 Unclassified 1765
53 Ga0075431_100526482 3300006847 Unclassified 1171
54 Ga0075431_100708865 3300006847 Bacteria 984
55 Ga0075431_100799449 3300006847 Unclassified 916
56 Ga0075431_100881781 3300006847 Unclassified 865
57 Ga0075433_10231400 3300006852 Bacteria 1641
58 Ga0075433_10340823 3300006852 Bacteria 1325
59 Ga0075434_100120793 3300006871 Unclassified 2636
60 Ga0075434_100731073 3300006871 Unclassified 1007
61 Ga0075429_100006477 3300006880 Bacteria 10142
62 Ga0075429_100070418 3300006880 Bacteria 3045
63 Ga0075429_100289474 3300006880 Unclassified 1434
64 Ga0075436_100035348 3300006914 Bacteria 3448
65 Ga0097620_100401343 3300006931 Bacteria 1467
66 Ga0097620_100557263 3300006931 Bacteria 1240
67 Ga0111539_10026939 3300009094 Bacteria 7022
68 Ga0111539_10149465 3300009094 Unclassified 2734
69 Ga0111539_10269745 3300009094 Bacteria 1981
70 Ga0111539_10905626 3300009094 Unclassified 1026
71 Ga0111539_11346919 3300009094 Bacteria 828
72 Ga0114129_10004078 3300009147 Bacteria 20633
73 Ga0114129_10011563 3300009147 Bacteria 12569
74 Ga0114129_10040699 3300009147 Bacteria 6550
75 Ga0114129_10213081 3300009147 Bacteria 2610
76 Ga0114129_10234494 3300009147 Bacteria 2470
77 Ga0114129_10293647 3300009147 Bacteria 2168
78 Ga0114129_10478048 3300009147 Unclassified 1631
79 Ga0114129_11511498 3300009147 Bacteria 825
80 Ga0114129_11701188 3300009147 Unclassified 770
81 Ga0157378_10036962 3300013297 Bacteria 4323
82 Ga0157378_10093236 3300013297 Unclassified 2741
83 Ga0163162_10024194 3300013306 Bacteria 5993
84 Ga0157380_10104581 3300014326 Bacteria 2365
85 Ga0157380_10120261 3300014326 Bacteria 2224
86 Ga0157380_11159755 3300014326 Bacteria 814
87 Ga0163161_10263262 3300017792 Unclassified 1347
88 Ga0207707_10006298 3300025912 Bacteria 10363
89 Ga0207660_10890569 3300025917 Unclassified 726
90 Ga0207652_10011372 3300025921 Bacteria 7172
91 Ga0207681_10013183 3300025923 Bacteria 5111
92 Ga0207644_10241995 3300025931 Bacteria 1437
93 Ga0207686_10018823 3300025934 Bacteria 3916
94 Ga0207670_10315580 3300025936 Bacteria 1228
95 Ga0207668_10400792 3300025972 Unclassified 1160
96 Ga0207708_10294643 3300026075 Bacteria 1318
97 Ga0210000_1033853 3300027462 Unclassified 803
98 Ga0209995_1018990 3300027471 Unclassified 1135
99 Ga0209983_1034023 3300027665 Unclassified 1091
100 Ga0209966_1025744 3300027695 Unclassified 1169
101 Ga0209974_10007614 3300027876 Unclassified 3729
102 Ga0207428_10247169 3300027907 Unclassified 1331
103 Ga0268265_11126902 3300028380 Unclassified 780
104 Ga0268264_10350698 3300028381 Unclassified 1405
105 Ga0307408_100033968 3300031548 Bacteria 3568
106 Ga0307408_100073449 3300031548 Bacteria 2535
107 Ga0307405_10226325 3300031731 Bacteria 1376
108 Ga0307405_10504982 3300031731 Bacteria 970
109 Ga0307410_10430829 3300031852 Bacteria 1072
110 Ga0307410_10555876 3300031852 Bacteria 952
111 Ga0307410_10764480 3300031852 Bacteria 819
112 Ga0307412_10285453 3300031911 Bacteria 1298
113 Ga0307412_10610524 3300031911 Unclassified 925
114 Ga0307416_100023231 3300032002 Bacteria 4495
115 Ga0307416_100655441 3300032002 Unclassified 1135
116 Ga0307416_101167641 3300032002 Unclassified 875
117 Ga0307414_10914573 3300032004 Bacteria 805
118 Ga0373945_0030487 3300035116 Bacteria 1902
119 Ga0373931_0009155 3300035691 Bacteria 4728
120 Ga0373931_0065613 3300035691 Bacteria 1968
121 Ga0373925_0344917 3300037068 Bacteria 1208
122 Ga0439441_094857 3300042001 Unclassified 663
123 Ga0439434_0066401 3300042435 Unclassified 1132
124 Ga0439435_0004265 3300042436 Bacteria 3063
125 Ga0439435_0088576 3300042436 Unclassified 938
126 Ga0453684_0388792 3300044712 Bacteria 1565
127 Ga0451576_0188634 3300045051 Bacteria 2153
128 Ga0495603_0050588 3300046455 Bacteria 2471
129 Ga0495580_0413173 3300046472 Unclassified 909
130 Ga0495585_0343852 3300046492 Bacteria 726
131 Ga0495586_0106683 3300046535 Bacteria 1558
132 Ga0495658_0369224 3300046683 Bacteria 913
133 Ga0501039_0061309 3300049575 Unclassified 2913
134 Ga0501039_0122775 3300049575 Bacteria 2036
135 Ga0501039_0200786 3300049575 Unclassified 1568
136 Ga0501039_0516510 3300049575 Bacteria 938
137 Ga0501040_0031248 3300049576 Unclassified 3597
138 Ga0501040_0072162 3300049576 Bacteria 2384
139 Ga0501041_0027044 3300049577 Unclassified 3455
140 Ga0501041_0188119 3300049577 Bacteria 1293
141 Ga0501042_0011951 3300049578 Bacteria 5867
142 Ga0501042_0387451 3300049578 Unclassified 1012
143 Ga0501043_0418778 3300049579 Bacteria 1010
144 Ga0501046_0039161 3300049580 Unclassified 3798
145 Ga0501046_0074628 3300049580 Bacteria 2631
146 Ga0501048_0034505 3300049582 Unclassified 3649
147 Ga0501048_0118812 3300049582 Unclassified 1868
148 Ga0501071_0120084 3300049587 Bacteria 1948
149 Ga0501071_0158705 3300049587 Bacteria 1690
150 Ga0501072_0038515 3300049588 Bacteria 3752
151 Ga0501075_0000810 3300049591 Bacteria 19574
152 Ga0501075_0073344 3300049591 Bacteria 2589
153 Ga0501075_0258163 3300049591 Unclassified 1328
154 Ga0501075_0359349 3300049591 Bacteria 1110
155 Ga0501076_0002819 3300049592 Bacteria 12025
156 Ga0501076_0098847 3300049592 Unclassified 2351
157 Ga0501076_0166943 3300049592 Unclassified 1794
158 Ga0501076_0260180 3300049592 Unclassified 1421
159 Ga0501076_0404953 3300049592 Bacteria 1122
160 Ga0501077_0013295 3300049593 Bacteria 5161
161 Ga0501077_0024237 3300049593 Unclassified 3852
162 Ga0501077_0062090 3300049593 Bacteria 2371
163 Ga0501077_0064688 3300049593 Bacteria 2320
164 Ga0501077_0455979 3300049593 Unclassified 819
165 Ga0501079_0002615 3300049741 Bacteria 13087
166 Ga0501079_0162025 3300049741 Bacteria 1744
167 Ga0501081_0041959 3300049743 Unclassified 3135
168 Ga0501081_0515469 3300049743 Unclassified 892
169 Ga0501045_0018264 3300049824 Bacteria 4987
170 Ga0501045_0041600 3300049824 Unclassified 3343
171 nmdc:mga00v17_400481_c1 3300050491 Unclassified 892
172 nmdc:mga05p37_1257975_c1 3300050507 Unclassified 759
173 nmdc:mga05p37_15012_c1 3300050507 Bacteria 9298
174 nmdc:mga05p37_44263_c1 3300050507 Bacteria 5477
175 nmdc:mga05p37_590301_c1 3300050507 Bacteria 1256
176 nmdc:mga05p37_89775_c1 3300050507 Bacteria 1838
177 nmdc:mga05p37_94789_c1 3300050507 Bacteria 3677
178 nmdc:mga05p37_991784_c1 3300050507 Bacteria 893
179 nmdc:mga05p37_991973_c1 3300050507 Unclassified 893
180 nmdc:mga09592_1020918_c1 3300050508 Unclassified 691
181 nmdc:mga09592_19066_c1 3300050508 Bacteria 5629
182 nmdc:mga09592_428810_c1 3300050508 Bacteria 1142
183 nmdc:mga09592_737940_c1 3300050508 Unclassified 836
184 nmdc:mga09592_860469_c1 3300050508 Unclassified 764
185 nmdc:mga0qj67_127920_c1 3300050509 Bacteria 2056
186 nmdc:mga0qj67_147274_c1 3300050509 Bacteria 1909
187 nmdc:mga0qj67_2638_c1 3300050509 Bacteria 12847
188 nmdc:mga0qj67_418481_c1 3300050509 Unclassified 1080
189 nmdc:mga0qj67_431882_c1 3300050509 Bacteria 1062
190 nmdc:mga0qj67_505640_c1 3300050509 Bacteria 971
191 nmdc:mga0qj67_679563_c1 3300050509 Unclassified 820
192 nmdc:mga0qj67_7017_c1 3300050509 Bacteria 5640
193 nmdc:mga0qj67_8532_c1 3300050509 Bacteria 7604
194 nmdc:mga06r32_156519_c1 3300050510 Unclassified 2260
195 nmdc:mga06r32_191258_c1 3300050510 Bacteria 2034
196 nmdc:mga06r32_4714_c1 3300050510 Bacteria 12259
197 nmdc:mga06r32_74974_c1 3300050510 Unclassified 3281
198 nmdc:mga06r32_754412_c1 3300050510 Unclassified 936
199 nmdc:mga06r32_77431_c1 3300050510 Bacteria 3231
200 nmdc:mga06r32_900149_c1 3300050510 Unclassified 841
201 nmdc:mga06r32_975206_c1 3300050510 Unclassified 801
202 nmdc:mga08y16_105510_c1 3300050511 Bacteria 2933
203 nmdc:mga08y16_52629_c1 3300050511 Bacteria 4259
204 nmdc:mga08y16_571104_c1 3300050511 Bacteria 1143
205 nmdc:mga08y16_686866_c1 3300050511 Unclassified 1025
206 nmdc:mga0n895_116254_c1 3300050512 Unclassified 2693
207 nmdc:mga0n895_535008_c1 3300050512 Bacteria 1178
208 nmdc:mga08x19_2106_c1 3300050514 Bacteria 12161
209 nmdc:mga0a205_358647_c1 3300050515 Unclassified 1325
210 nmdc:mga0a205_386666_c1 3300050515 Bacteria 1264
211 nmdc:mga0a205_785513_c1 3300050515 Bacteria 800
212 Ga0501084_0024016 3300054114 Bacteria 5085
213 Ga0501084_0065324 3300054114 Bacteria 3044
214 Ga0501084_0767951 3300054114 Bacteria 812
215 Ga0501084_0905580 3300054114 Bacteria 742
216 Ga0501084_1105358 3300054114 Unclassified 665
217 Ga0590071_059593 3300059421 Bacteria 932
218 Ga0590077_004592 3300059426 Bacteria 2831
219 Ga0501082_0025846 3300060353 Bacteria 5061
220 Ga0501082_0420670 3300060353 Bacteria 1167
221 Ga0501082_0434962 3300060353 Bacteria 1146
222 Ga0530510_0023302 3300061734 Bacteria 4410
223 Ga0530510_0027562 3300061734 Unclassified 4070
224 Ga0530510_0850563 3300061734 Bacteria 697
225 nmdc:mga05p37_12412_c1
226 SwRhRL3b_contig_2841241
227 Ga0065716_1004588
228 Ga0065715_10468711
229 Ga0065707_10090607
230 Ga0070680_100029914
231 Ga0070680_100689502
232 Ga0070687_100238430
233 Ga0070668_100525564
234 Ga0070669_100010719
235 Ga0070674_100175542
236 Ga0070659_100941162
237 Ga0070701_10105558
238 Ga0070705_100441876
239 Ga0070700_100416733
240 Ga0070681_10550783
241 Ga0070698_100013775
242 Ga0070698_100037721
243 Ga0070699_100057862
244 Ga0070679_100072901
245 Ga0070697_100078728
246 Ga0070697_100146548
247 Ga0070696_100025940
248 Ga0070696_100076790
249 Ga0070704_100207644
250 Ga0070704_100682162
251 Ga0068859_100401384
252 Ga0068859_100557233
253 Ga0068860_100258848
254 Ga0081455_10012675
255 Ga0075428_100072506
256 Ga0075428_100219184
257 Ga0075428_100347028
258 Ga0075428_100433235
259 Ga0075428_101052783
260 Ga0075430_100021347
261 Ga0075430_100046236
262 Ga0075430_100049023
263 Ga0075430_100117390
264 Ga0075430_100202281
265 Ga0075430_100241752
266 Ga0075430_100278258
267 Ga0075430_100317059
268 Ga0075430_100376304
269 Ga0075430_100585954
270 Ga0075431_100008938
271 Ga0075431_100020394
272 Ga0075431_100062093
273 Ga0075431_100124877
274 Ga0075431_100179649
275 Ga0075431_100257501
276 Ga0075431_100259150
277 Ga0075431_100526482
278 Ga0075431_100708865
279 Ga0075431_100799449
280 Ga0075431_100881781
281 Ga0075433_10231400
282 Ga0075433_10340823
283 Ga0075434_100120793
284 Ga0075434_100731073
285 Ga0075429_100006477
286 Ga0075429_100070418
287 Ga0075429_100289474
288 Ga0075436_100035348
289 Ga0097620_100401343
290 Ga0097620_100557263
291 Ga0111539_10026939
292 Ga0111539_10149465
293 Ga0111539_10269745
294 Ga0111539_10905626
295 Ga0111539_11346919
296 Ga0114129_10004078
297 Ga0114129_10011563
298 Ga0114129_10040699
299 Ga0114129_10213081
300 Ga0114129_10234494
301 Ga0114129_10293647
302 Ga0114129_10478048
303 Ga0114129_11511498
304 Ga0114129_11701188
305 Ga0157378_10036962
306 Ga0157378_10093236
307 Ga0163162_10024194
308 Ga0157380_10104581
309 Ga0157380_10120261
310 Ga0157380_11159755
311 Ga0163161_10263262
312 Ga0207707_10006298
313 Ga0207660_10890569
314 Ga0207652_10011372
315 Ga0207681_10013183
316 Ga0207644_10241995
317 Ga0207686_10018823
318 Ga0207670_10315580
319 Ga0207668_10400792
320 Ga0207708_10294643
321 Ga0210000_1033853
322 Ga0209995_1018990
323 Ga0209983_1034023
324 Ga0209966_1025744
325 Ga0209974_10007614
326 Ga0207428_10247169
327 Ga0268265_11126902
328 Ga0268264_10350698
329 Ga0307408_100033968
330 Ga0307408_100073449
331 Ga0307405_10226325
332 Ga0307405_10504982
333 Ga0307410_10430829
334 Ga0307410_10555876
335 Ga0307410_10764480
336 Ga0307412_10285453
337 Ga0307412_10610524
338 Ga0307416_100023231
339 Ga0307416_100655441
340 Ga0307416_101167641
341 Ga0307414_10914573
342 Ga0373945_0030487
343 Ga0373931_0009155
344 Ga0373931_0065613
345 Ga0373925_0344917
346 Ga0439441_094857
347 Ga0439434_0066401
348 Ga0439435_0004265
349 Ga0439435_0088576
350 Ga0453684_0388792
351 Ga0451576_0188634
352 Ga0495603_0050588
353 Ga0495580_0413173
354 Ga0495585_0343852
355 Ga0495586_0106683
356 Ga0495658_0369224
357 Ga0501039_0061309
358 Ga0501039_0122775
359 Ga0501039_0200786
360 Ga0501039_0516510
361 Ga0501040_0031248
362 Ga0501040_0072162
363 Ga0501041_0027044
364 Ga0501041_0188119
365 Ga0501042_0011951
366 Ga0501042_0387451
367 Ga0501043_0418778
368 Ga0501046_0039161
369 Ga0501046_0074628
370 Ga0501048_0034505
371 Ga0501048_0118812
372 Ga0501071_0120084
373 Ga0501071_0158705
374 Ga0501072_0038515
375 Ga0501075_0000810
376 Ga0501075_0073344
377 Ga0501075_0258163
378 Ga0501075_0359349
379 Ga0501076_0002819
380 Ga0501076_0098847
381 Ga0501076_0166943
382 Ga0501076_0260180
383 Ga0501076_0404953
384 Ga0501077_0013295
385 Ga0501077_0024237
386 Ga0501077_0062090
387 Ga0501077_0064688
388 Ga0501077_0455979
389 Ga0501079_0002615
390 Ga0501079_0162025
391 Ga0501081_0041959
392 Ga0501081_0515469
393 Ga0501045_0018264
394 Ga0501045_0041600
395 nmdc:mga00v17_400481_c1
396 nmdc:mga05p37_1257975_c1
397 nmdc:mga05p37_15012_c1
398 nmdc:mga05p37_44263_c1
399 nmdc:mga05p37_590301_c1
400 nmdc:mga05p37_89775_c1
401 nmdc:mga05p37_94789_c1
402 nmdc:mga05p37_991784_c1
403 nmdc:mga05p37_991973_c1
404 nmdc:mga09592_1020918_c1
405 nmdc:mga09592_19066_c1
406 nmdc:mga09592_428810_c1
407 nmdc:mga09592_737940_c1
408 nmdc:mga09592_860469_c1
409 nmdc:mga0qj67_127920_c1
410 nmdc:mga0qj67_147274_c1
411 nmdc:mga0qj67_2638_c1
412 nmdc:mga0qj67_418481_c1
413 nmdc:mga0qj67_431882_c1
414 nmdc:mga0qj67_505640_c1
415 nmdc:mga0qj67_679563_c1
416 nmdc:mga0qj67_7017_c1
417 nmdc:mga0qj67_8532_c1
418 nmdc:mga06r32_156519_c1
419 nmdc:mga06r32_191258_c1
420 nmdc:mga06r32_4714_c1
421 nmdc:mga06r32_74974_c1
422 nmdc:mga06r32_754412_c1
423 nmdc:mga06r32_77431_c1
424 nmdc:mga06r32_900149_c1
425 nmdc:mga06r32_975206_c1
426 nmdc:mga08y16_105510_c1
427 nmdc:mga08y16_52629_c1
428 nmdc:mga08y16_571104_c1
429 nmdc:mga08y16_686866_c1
430 nmdc:mga0n895_116254_c1
431 nmdc:mga0n895_535008_c1
432 nmdc:mga08x19_2106_c1
433 nmdc:mga0a205_358647_c1
434 nmdc:mga0a205_386666_c1
435 nmdc:mga0a205_785513_c1
436 Ga0501084_0024016
437 Ga0501084_0065324
438 Ga0501084_0767951
439 Ga0501084_0905580
440 Ga0501084_1105358
441 Ga0590071_059593
442 Ga0590077_004592
443 Ga0501082_0025846
444 Ga0501082_0420670
445 Ga0501082_0434962
446 Ga0530510_0023302
447 Ga0530510_0027562
448 Ga0530510_0850563

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
8j5k-assembly1.cif.gz_u structural insights into photosystem ii supercomplex and trimeric fcp antennae of a centric diatom cyclotella meneghiniana 0.7742 144 202
8dss-assembly1.cif.gz_B x-ray crystal structure of geobacillus stearothermophilus comea 0.7635 144 204
8iwh-assembly1.cif.gz_u structure and characteristics of a photosystem ii supercomplex containing monomeric lhcx and dimeric fcpii antennae from the diatom thalassiosira pseudonana 0.7617 144 204
2duy-assembly1.cif.gz_A crystal structure of competence protein comea-related protein from thermus thermophilus hb8 0.76 29 92
2duy-assembly1.cif.gz_A crystal structure of competence protein comea-related protein from thermus thermophilus hb8 0.7204 29 92
ID Description Score Start End Superfamily
af_Q6TEQ0_116_189_1.10.150.280 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;AF1531-like domain 0.7828 143 204 1.10.150.280
af_Q7L9B9_134_199_1.10.150.280 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;AF1531-like domain 0.7687 144 201 1.10.150.280
3a0hu01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Photosystem II 12 kDa extrinsic protein 0.7356 144 204 1.10.150.320
3arcU01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Photosystem II 12 kDa extrinsic protein 0.7332 144 204 1.10.150.320
af_Q7L9B9_134_199_1.10.150.280 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;AF1531-like domain 0.6817 144 201 1.10.150.280
ID Description Score Start End GO Terms
AF-A0A7V9TNJ0-F1-model_v4 Helix-hairpin-helix domain-containing protein 0.995 143 204
AF-A0A7W1E8F2-F1-model_v4 Helix-hairpin-helix domain-containing protein 0.9891 143 204
AF-A0A7W1JRK9-F1-model_v4 Helix-hairpin-helix domain-containing protein 0.9785 143 204
AF-A0A7X3WEV7-F1-model_v4 Helix-hairpin-helix domain-containing protein 0.9356 29 204
AF-A0A7V8XRT6-F1-model_v4 Helix-hairpin-helix domain-containing protein 0.9237 41 204

Map