F335181

General Info

Members Datasets Scaffolds Average Seq Length
223 162 446 419

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10000013|Ga0070658_10000013226
Length 432
Sequence MNVLLLGSGGREHALAWKLAQSPLLAKLFAAPGNPGIAEHAQIVALDAADHRAVVDFCRRHAIELVVIGPEAPLVDGLADNLRATGFAVFGPNKAAAQLEGSKGYTKDLCARYGIPTARYCRASDRLAAEAALEDFPLPVVIKADGLAAGKGVIIAATPEEAQAALGEMFDGGFGGAGEAVVIEEFLEGEEASFFALTDGMTVLPFGNAQDHKRVGDGDTGPNTGGMGAYSPAAIVTPEVAQRVMREIVVPTVRAQAERGAPYSGILYAGLMLTAEGPKLIEYNVRFGDPECQVLMMRLEGDLLPLMLATARGRLAEAEAPRFAKDAALTVVMAANGYPGTPERGGAIAGIAEAEAEGASVFHAGTILEDGRLVANGGRVLAVTARGASVAEARERAYAALDRIDFPSGFCRRDIGWREIARARAGQRGVSS

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
5 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
56 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
60 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
98 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
99 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
100 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
107 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
108 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
109 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
110 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
111 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
112 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
113 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
114 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
115 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
116 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
117 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
118 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
119 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
120 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
121 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
124 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
134 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
135 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
147 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
148 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
151 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
152 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
153 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
154 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
155 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
158 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
159 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
160 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
161 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
162 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.31
Metatranscriptomes 0.45
Isolates 2.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13
Nodule 0
Rhizoplane 0.45
Rhizosphere 80.72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10000013 3300005327 Bacteria 267776
2 JGI24749J21850_1000119 3300002076 Bacteria 13219
3 JGI24751J29686_10000280 3300002459 Bacteria 19840
4 Ga0055528_1021329 3300003790 Bacteria 2060
5 Ga0055530_10000064 3300003791 Bacteria 94475
6 Ga0055531_10000073 3300003794 Bacteria 109510
7 Ga0065165_1001302 3300005262 Bacteria 27888
8 Ga0065165_1003514 3300005262 Bacteria 10872
9 Ga0065165_1018465 3300005262 Bacteria 2523
10 Ga0065707_10085948 3300005295 Bacteria 5773
11 Ga0070670_100000024 3300005331 Bacteria 189811
12 Ga0070670_100000125 3300005331 Bacteria 71778
13 Ga0070670_100013117 3300005331 Bacteria 7099
14 Ga0070677_10003943 3300005333 Bacteria 4817
15 Ga0068869_100203902 3300005334 Bacteria 1561
16 Ga0070660_100000461 3300005339 Bacteria 27029
17 Ga0070660_100001346 3300005339 Bacteria 16694
18 Ga0070692_10019890 3300005345 Bacteria 3246
19 Ga0070668_100000001 3300005347 Bacteria 275905
20 Ga0070668_100044593 3300005347 Bacteria 3402
21 Ga0070669_100000047 3300005353 Bacteria 118892
22 Ga0070671_100000334 3300005355 Bacteria 32339
23 Ga0070659_100008118 3300005366 Bacteria 7657
24 Ga0070667_100000006 3300005367 Bacteria 336732
25 Ga0070667_100000205 3300005367 Bacteria 69657
26 Ga0070667_100000319 3300005367 Bacteria 53623
27 Ga0070667_100039636 3300005367 Bacteria 3949
28 Ga0070710_10036550 3300005437 Bacteria 2686
29 Ga0070681_10077727 3300005458 Bacteria 3276
30 Ga0070698_100311588 3300005471 Bacteria 1505
31 Ga0068853_100066190 3300005539 Bacteria 3138
32 Ga0070686_100001235 3300005544 Bacteria 14534
33 Ga0070696_100036491 3300005546 Bacteria 3389
34 Ga0070665_100000497 3300005548 Bacteria 56270
35 Ga0068852_100120746 3300005616 Bacteria 2399
36 Ga0068859_100002070 3300005617 Bacteria 20476
37 Ga0068859_100002663 3300005617 Bacteria 18123
38 Ga0068864_100000036 3300005618 Bacteria 189811
39 Ga0068864_100000098 3300005618 Bacteria 85661
40 Ga0068863_100000127 3300005841 Bacteria 80572
41 Ga0068863_100030640 3300005841 Bacteria 5136
42 Ga0068863_100036645 3300005841 Bacteria 4672
43 Ga0068863_100051025 3300005841 Bacteria 3921
44 Ga0068858_100000986 3300005842 Bacteria 29374
45 Ga0068860_100000120 3300005843 Bacteria 125823
46 Ga0068860_100000376 3300005843 Bacteria 58490
47 Ga0068860_100063705 3300005843 Bacteria 3501
48 Ga0068862_100000033 3300005844 Bacteria 176515
49 Ga0068862_100000133 3300005844 Bacteria 86113
50 Ga0068862_100005121 3300005844 Bacteria 11017
51 Ga0081539_10008266 3300005985 Bacteria 9136
52 Ga0075370_10076842 3300006353 Bacteria 1915
53 Ga0075428_100096653 3300006844 Bacteria 3220
54 Ga0075431_100032547 3300006847 Bacteria 5373
55 Ga0075433_10080803 3300006852 Bacteria 2866
56 Ga0075434_100029028 3300006871 Bacteria 5439
57 Ga0075429_100023860 3300006880 Bacteria 5308
58 Ga0097620_100002070 3300006931 Bacteria 20476
59 Ga0097620_100002663 3300006931 Bacteria 18123
60 Ga0075435_100111093 3300007076 Bacteria 2280
61 Ga0105251_10002009 3300009011 Bacteria 16530
62 Ga0105245_10001555 3300009098 Bacteria 20823
63 Ga0105247_10009869 3300009101 Bacteria 5783
64 Ga0114129_10165378 3300009147 Bacteria 3020
65 Ga0105243_10121729 3300009148 Bacteria 2201
66 Ga0105248_10000016 3300009177 Bacteria 308151
67 Ga0105248_10000091 3300009177 Bacteria 101191
68 Ga0105238_10198702 3300009551 Bacteria 1980
69 Ga0105249_10000116 3300009553 Bacteria 108394
70 Ga0157371_10055311 3300013102 Bacteria 2816
71 Ga0157369_10005411 3300013105 Bacteria 14863
72 Ga0163162_10111065 3300013306 Bacteria 2839
73 Ga0157380_10000209 3300014326 Bacteria 34445
74 Ga0157379_10075082 3300014968 Bacteria 3026
75 Ga0157379_10112585 3300014968 Bacteria 2446
76 Ga0163161_10085327 3300017792 Bacteria 2329
77 Ga0206353_11398560 3300020082 Bacteria 7197
78 Ga0213873_10000014 3300021358 Bacteria 139420
79 Ga0213876_10000020 3300021384 Bacteria 268316
80 Ga0213876_10000583 3300021384 Bacteria 27186
81 Ga0213876_10000822 3300021384 Bacteria 20968
82 Ga0207425_1007322 3300025245 Bacteria 2924
83 Ga0209565_1000007 3300025263 Bacteria 784361
84 Ga0209673_1016362 3300025273 Bacteria 2777
85 Ga0209675_1001749 3300025291 Bacteria 11928
86 Ga0209564_1011827 3300025295 Bacteria 3870
87 Ga0209050_1000010 3300025298 Bacteria 980454
88 Ga0209050_1015670 3300025298 Bacteria 3162
89 Ga0209256_1000008 3300025299 Bacteria 975723
90 Ga0209257_1000027 3300025304 Bacteria 703541
91 Ga0209257_1002589 3300025304 Bacteria 17568
92 Ga0207713_1005092 3300025735 Bacteria 8340
93 Ga0207682_10002192 3300025893 Bacteria 8821
94 Ga0207710_10021220 3300025900 Bacteria 2781
95 Ga0207705_10000002 3300025909 Bacteria 2046852
96 Ga0207707_10002028 3300025912 Bacteria 18381
97 Ga0207707_10015292 3300025912 Bacteria 6681
98 Ga0207660_10000623 3300025917 Bacteria 23878
99 Ga0207660_10028140 3300025917 Bacteria 3843
100 Ga0207657_10003515 3300025919 Bacteria 16738
101 Ga0207657_10010863 3300025919 Bacteria 9056
102 Ga0207649_10000027 3300025920 Bacteria 161926
103 Ga0207652_10000003 3300025921 Bacteria 502441
104 Ga0207681_10000014 3300025923 Bacteria 353422
105 Ga0207650_10000015 3300025925 Bacteria 369173
106 Ga0207650_10001633 3300025925 Bacteria 15964
107 Ga0207650_10026665 3300025925 Bacteria 4125
108 Ga0207687_10000289 3300025927 Bacteria 34612
109 Ga0207644_10000330 3300025931 Bacteria 30791
110 Ga0207690_10005161 3300025932 Bacteria 7707
111 Ga0207709_10054037 3300025935 Bacteria 2474
112 Ga0207711_10000022 3300025941 Bacteria 340441
113 Ga0207711_10000724 3300025941 Bacteria 32484
114 Ga0207711_10001481 3300025941 Bacteria 21836
115 Ga0207689_10053350 3300025942 Bacteria 3331
116 Ga0207712_10000310 3300025961 Bacteria 44589
117 Ga0207668_10000043 3300025972 Bacteria 103738
118 Ga0207668_10030066 3300025972 Bacteria 3567
119 Ga0207658_10000010 3300025986 Bacteria 240224
120 Ga0207658_10000109 3300025986 Bacteria 89979
121 Ga0207658_10000143 3300025986 Bacteria 74612
122 Ga0207658_10026331 3300025986 Bacteria 4077
123 Ga0207703_10005176 3300026035 Bacteria 10543
124 Ga0207641_10000022 3300026088 Bacteria 279334
125 Ga0207641_10000919 3300026088 Bacteria 30374
126 Ga0207641_10026277 3300026088 Bacteria 4804
127 Ga0207641_10034480 3300026088 Bacteria 4211
128 Ga0207676_10000021 3300026095 Bacteria 296572
129 Ga0207676_10000209 3300026095 Bacteria 50724
130 Ga0207675_100000041 3300026118 Bacteria 90476
131 Ga0207675_100002138 3300026118 Bacteria 19611
132 Ga0209983_1003223 3300027665 Bacteria 3499
133 Ga0209971_1005018 3300027682 Bacteria 3143
134 Ga0209974_10001558 3300027876 Bacteria 8333
135 Ga0268266_10000294 3300028379 Bacteria 81573
136 Ga0268265_10000013 3300028380 Bacteria 341536
137 Ga0268265_10000090 3300028380 Bacteria 116514
138 Ga0268265_10003636 3300028380 Bacteria 10999
139 Ga0268264_10000070 3300028381 Bacteria 268524
140 Ga0268264_10000144 3300028381 Bacteria 168841
141 Ga0268264_10048990 3300028381 Bacteria 3514
142 Ga0307513_10169972 3300031456 Bacteria 2059
143 Ga0265313_10008300 3300031595 Bacteria 6923
144 Ga0307508_10000437 3300031616 Bacteria 49724
145 Ga0265314_10009377 3300031711 Bacteria 8271
146 Ga0307412_10153742 3300031911 Bacteria 1701
147 Ga0307416_100122337 3300032002 Bacteria 2322
148 Ga0395905_0091394 3300037471 Bacteria 2854
149 Ga0395901_0115615 3300038443 Bacteria 2818
150 Ga0436365_0507260 3300039437 Bacteria 27248
151 Ga0436365_0603127 3300039437 Bacteria 14569
152 Ga0436365_1447172 3300039437 Bacteria 79922
153 Ga0436362_0847557 3300039453 Bacteria 84207
154 Ga0439436_0012978 3300041404 Bacteria 2524
155 Ga0439461_0003704 3300041410 Bacteria 2523
156 Ga0439465_0001061 3300041413 Bacteria 8773
157 Ga0439465_0007971 3300041413 Bacteria 3351
158 Ga0439462_0006698 3300042015 Bacteria 2873
159 Ga0439446_0022792 3300042156 Bacteria 1777
160 Ga0439434_0000379 3300042435 Bacteria 12648
161 Ga0439434_0003318 3300042435 Bacteria 4726
162 Ga0495585_0019933 3300046492 Bacteria 3860
163 Ga0495606_0005741 3300046507 Bacteria 11734
164 Ga0495616_0000022 3300046513 Bacteria 149720
165 Ga0495620_0050159 3300046515 Bacteria 1782
166 Ga0495622_0010501 3300046557 Bacteria 4276
167 Ga0495668_0002540 3300046616 Bacteria 14877
168 Ga0495625_0000400 3300046660 Bacteria 66228
169 Ga0495670_0000017 3300046691 Bacteria 120427
170 Ga0495671_0026714 3300046692 Bacteria 2989
171 Ga0496101_0018567 3300048904 Bacteria 4731
172 Ga0496117_0009278 3300048920 Bacteria 9192
173 Ga0496118_0000855 3300048921 Bacteria 48305
174 Ga0501032_0038748 3300049569 Bacteria 3244
175 Ga0501034_0062691 3300049571 Bacteria 3734
176 Ga0501034_0087014 3300049571 Bacteria 3125
177 Ga0501034_0266751 3300049571 Bacteria 1654
178 Ga0501038_0029173 3300049574 Bacteria 4892
179 Ga0501040_0009558 3300049576 Bacteria 6327
180 Ga0501043_0037910 3300049579 Bacteria 3791
181 Ga0501047_0200043 3300049581 Bacteria 1859
182 Ga0501047_0303243 3300049581 Bacteria 1439
183 Ga0501069_0008704 3300049585 Bacteria 5344
184 Ga0501073_0083095 3300049589 Bacteria 2228
185 Ga0501075_0001095 3300049591 Bacteria 17455
186 Ga0501076_0018210 3300049592 Bacteria 5350
187 Ga0501076_0041226 3300049592 Bacteria 3631
188 Ga0501249_005513 3300049679 Bacteria 2586
189 Ga0501080_0068490 3300049742 Bacteria 3301
190 Ga0501081_0008368 3300049743 Bacteria 6713
191 Ga0501083_0044053 3300049744 Bacteria 3021
192 Ga0501083_0095258 3300049744 Bacteria 1964
193 Ga0501035_0078359 3300049822 Bacteria 2919
194 nmdc:mga07m45_70586_c1 3300050496 Bacteria 1987
195 nmdc:mga07m45_73511_c1 3300050496 Bacteria 1946
196 nmdc:mga05p37_26816_c1 3300050507 Bacteria 7009
197 nmdc:mga09592_9831_c1 3300050508 Bacteria 7776
198 nmdc:mga06r32_21594_c1 3300050510 Bacteria 5944
199 nmdc:mga0n895_15569_c1 3300050512 Bacteria 6941
200 nmdc:mga0n895_155772_c1 3300050512 Bacteria 2315
201 nmdc:mga0rr50_204398_c1 3300050513 Bacteria 1625
202 nmdc:mga0a205_108932_c2 3300050515 Bacteria 2374
203 nmdc:mga0a205_21407_c1 3300050515 Bacteria 6118
204 nmdc:mga0a205_25120_c1 3300050515 Bacteria 2880
205 Ga0500566_0001569 3300053094 Bacteria 13434
206 Ga0500641_0004446 3300053096 Bacteria 4954
207 Ga0500595_015217 3300053119 Bacteria 2892
208 Ga0500658_0000613 3300053134 Bacteria 14781
209 Ga0500559_0013493 3300053136 Bacteria 3460
210 Ga0500568_0000051 3300053139 Bacteria 112462
211 Ga0500604_0006845 3300053151 Bacteria 3016
212 Ga0500627_0005512 3300053158 Bacteria 4209
213 Ga0500645_002847 3300053730 Bacteria 7438
214 Ga0500645_009015 3300053730 Bacteria 3370
215 Ga0501082_0007068 3300060353 Bacteria 9686
216 Ga0501082_0037557 3300060353 Bacteria 4175
217 Ga0530510_0006592 3300061734 Bacteria 8097
218 Ga0530510_0101175 3300061734 Bacteria 2107
219 2587861553 2585428094 Bacteria 3604039
220 2644125616 2643221622 Bacteria 4212502
221 2857722868 2857720070 Bacteria 3189373
222 2928030807 2928027323 Bacteria 4382488
223 2995728973 2995726249 Bacteria 3470435
224 Ga0070658_10000013
225 JGI24749J21850_1000119
226 JGI24751J29686_10000280
227 Ga0055528_1021329
228 Ga0055530_10000064
229 Ga0055531_10000073
230 Ga0065165_1001302
231 Ga0065165_1003514
232 Ga0065165_1018465
233 Ga0065707_10085948
234 Ga0070670_100000024
235 Ga0070670_100000125
236 Ga0070670_100013117
237 Ga0070677_10003943
238 Ga0068869_100203902
239 Ga0070660_100000461
240 Ga0070660_100001346
241 Ga0070692_10019890
242 Ga0070668_100000001
243 Ga0070668_100044593
244 Ga0070669_100000047
245 Ga0070671_100000334
246 Ga0070659_100008118
247 Ga0070667_100000006
248 Ga0070667_100000205
249 Ga0070667_100000319
250 Ga0070667_100039636
251 Ga0070710_10036550
252 Ga0070681_10077727
253 Ga0070698_100311588
254 Ga0068853_100066190
255 Ga0070686_100001235
256 Ga0070696_100036491
257 Ga0070665_100000497
258 Ga0068852_100120746
259 Ga0068859_100002070
260 Ga0068859_100002663
261 Ga0068864_100000036
262 Ga0068864_100000098
263 Ga0068863_100000127
264 Ga0068863_100030640
265 Ga0068863_100036645
266 Ga0068863_100051025
267 Ga0068858_100000986
268 Ga0068860_100000120
269 Ga0068860_100000376
270 Ga0068860_100063705
271 Ga0068862_100000033
272 Ga0068862_100000133
273 Ga0068862_100005121
274 Ga0081539_10008266
275 Ga0075370_10076842
276 Ga0075428_100096653
277 Ga0075431_100032547
278 Ga0075433_10080803
279 Ga0075434_100029028
280 Ga0075429_100023860
281 Ga0097620_100002070
282 Ga0097620_100002663
283 Ga0075435_100111093
284 Ga0105251_10002009
285 Ga0105245_10001555
286 Ga0105247_10009869
287 Ga0114129_10165378
288 Ga0105243_10121729
289 Ga0105248_10000016
290 Ga0105248_10000091
291 Ga0105238_10198702
292 Ga0105249_10000116
293 Ga0157371_10055311
294 Ga0157369_10005411
295 Ga0163162_10111065
296 Ga0157380_10000209
297 Ga0157379_10075082
298 Ga0157379_10112585
299 Ga0163161_10085327
300 Ga0206353_11398560
301 Ga0213873_10000014
302 Ga0213876_10000020
303 Ga0213876_10000583
304 Ga0213876_10000822
305 Ga0207425_1007322
306 Ga0209565_1000007
307 Ga0209673_1016362
308 Ga0209675_1001749
309 Ga0209564_1011827
310 Ga0209050_1000010
311 Ga0209050_1015670
312 Ga0209256_1000008
313 Ga0209257_1000027
314 Ga0209257_1002589
315 Ga0207713_1005092
316 Ga0207682_10002192
317 Ga0207710_10021220
318 Ga0207705_10000002
319 Ga0207707_10002028
320 Ga0207707_10015292
321 Ga0207660_10000623
322 Ga0207660_10028140
323 Ga0207657_10003515
324 Ga0207657_10010863
325 Ga0207649_10000027
326 Ga0207652_10000003
327 Ga0207681_10000014
328 Ga0207650_10000015
329 Ga0207650_10001633
330 Ga0207650_10026665
331 Ga0207687_10000289
332 Ga0207644_10000330
333 Ga0207690_10005161
334 Ga0207709_10054037
335 Ga0207711_10000022
336 Ga0207711_10000724
337 Ga0207711_10001481
338 Ga0207689_10053350
339 Ga0207712_10000310
340 Ga0207668_10000043
341 Ga0207668_10030066
342 Ga0207658_10000010
343 Ga0207658_10000109
344 Ga0207658_10000143
345 Ga0207658_10026331
346 Ga0207703_10005176
347 Ga0207641_10000022
348 Ga0207641_10000919
349 Ga0207641_10026277
350 Ga0207641_10034480
351 Ga0207676_10000021
352 Ga0207676_10000209
353 Ga0207675_100000041
354 Ga0207675_100002138
355 Ga0209983_1003223
356 Ga0209971_1005018
357 Ga0209974_10001558
358 Ga0268266_10000294
359 Ga0268265_10000013
360 Ga0268265_10000090
361 Ga0268265_10003636
362 Ga0268264_10000070
363 Ga0268264_10000144
364 Ga0268264_10048990
365 Ga0307513_10169972
366 Ga0265313_10008300
367 Ga0307508_10000437
368 Ga0265314_10009377
369 Ga0307412_10153742
370 Ga0307416_100122337
371 Ga0395905_0091394
372 Ga0395901_0115615
373 Ga0436365_0507260
374 Ga0436365_0603127
375 Ga0436365_1447172
376 Ga0436362_0847557
377 Ga0439436_0012978
378 Ga0439461_0003704
379 Ga0439465_0001061
380 Ga0439465_0007971
381 Ga0439462_0006698
382 Ga0439446_0022792
383 Ga0439434_0000379
384 Ga0439434_0003318
385 Ga0495585_0019933
386 Ga0495606_0005741
387 Ga0495616_0000022
388 Ga0495620_0050159
389 Ga0495622_0010501
390 Ga0495668_0002540
391 Ga0495625_0000400
392 Ga0495670_0000017
393 Ga0495671_0026714
394 Ga0496101_0018567
395 Ga0496117_0009278
396 Ga0496118_0000855
397 Ga0501032_0038748
398 Ga0501034_0062691
399 Ga0501034_0087014
400 Ga0501034_0266751
401 Ga0501038_0029173
402 Ga0501040_0009558
403 Ga0501043_0037910
404 Ga0501047_0200043
405 Ga0501047_0303243
406 Ga0501069_0008704
407 Ga0501073_0083095
408 Ga0501075_0001095
409 Ga0501076_0018210
410 Ga0501076_0041226
411 Ga0501249_005513
412 Ga0501080_0068490
413 Ga0501081_0008368
414 Ga0501083_0044053
415 Ga0501083_0095258
416 Ga0501035_0078359
417 nmdc:mga07m45_70586_c1
418 nmdc:mga07m45_73511_c1
419 nmdc:mga05p37_26816_c1
420 nmdc:mga09592_9831_c1
421 nmdc:mga06r32_21594_c1
422 nmdc:mga0n895_15569_c1
423 nmdc:mga0n895_155772_c1
424 nmdc:mga0rr50_204398_c1
425 nmdc:mga0a205_108932_c2
426 nmdc:mga0a205_21407_c1
427 nmdc:mga0a205_25120_c1
428 Ga0500566_0001569
429 Ga0500641_0004446
430 Ga0500595_015217
431 Ga0500658_0000613
432 Ga0500559_0013493
433 Ga0500568_0000051
434 Ga0500604_0006845
435 Ga0500627_0005512
436 Ga0500645_002847
437 Ga0500645_009015
438 Ga0501082_0007068
439 Ga0501082_0037557
440 Ga0530510_0006592
441 Ga0530510_0101175
442 2587861553
443 2644125616
444 2857722868
445 2928030807
446 2995728973

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01071

GARS_A

Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain

101

292

0.99

PF02844

GARS_N

Phosphoribosylglycinamide synthetase, N domain

1

100

0.99

PF02843

GARS_C

Phosphoribosylglycinamide synthetase, C domain

328

418

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lp8-assembly1.cif.gz_A crystal structure of phosphoribosylamine-glycine ligase from ehrlichia chaffeensis 0.9725 1 414
2xd4-assembly1.cif.gz_A nucleotide-bound structures of bacillus subtilis glycinamide ribonucleotide synthetase 0.9701 1 421
2yw2-assembly1.cif.gz_A crystal structure of gar synthetase from aquifex aeolicus in complex with atp 0.9699 1 418
2qk4-assembly1.cif.gz_A human glycinamide ribonucleotide synthetase 0.9618 2 421
2xd4-assembly1.cif.gz_A nucleotide-bound structures of bacillus subtilis glycinamide ribonucleotide synthetase 0.961 1 421
ID Description Score Start End Superfamily
af_P9WHM9_188_326_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9767 188 324 3.30.470.20
3lp8A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9761 3 93 3.40.50.20
af_C0PFX3_419_522_3.90.600.10 Alpha Beta;Alpha-Beta Complex;Glycinamide Ribonucleotide Synthetase; Chain A, domain 4;Phosphoribosylglycinamide synthetase, C-terminal domain 0.9735 330 424 3.90.600.10
af_K7LJM6_92_186_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9672 3 93 3.40.50.20
2yw2A03 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9657 188 324 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A3S0NQG1-F1-model_v4 deleted 0.9968 1 112
AF-A0A7X8LEI6-F1-model_v4 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.9931 1 108 GO:0004637
GO:0009113
AF-A0A5B8LJN4-F1-model_v4 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) 0.9907 1 423 GO:0004637
GO:0005524
GO:0006189
GO:0009113
GO:0046872
AF-A0A520YCJ3-F1-model_v4 phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) 0.9898 250 423 GO:0004637
GO:0005524
GO:0006189
GO:0009113
GO:0046872
AF-A0A2N6AZ33-F1-model_v4 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) 0.9894 1 421 GO:0004637
GO:0005524
GO:0006189
GO:0009113
GO:0046872

Map