F333942
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 221 | 182 | 442 | 285 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2873314349|2873321944 |
| Length | 335 |
| Sequence | ERAPHAHRPPPEGARGAGAPGHQRTAALPPASEDDAETPLRSAGGVRPGPTTRVRVREVSGTSARDRRDDLATEEPLEIRITAGGRTRTLAVTMRTPGADFELAAGFLAAEGIVHPDPRNTVTSAAIASIAYCTDEDLPPEARYNTVTVRLDSPVLPELPNMHRHFMTSSACGVCGTASLDALRARQATLPRTTPASFPPVPAETLYELPRRLRKAQGIFGKTGGLHAAGLFTPDGSLLALREDVGRHNAVDKLIGWALLSGRLPLTSSILMVSGRTSYEIMQKALSAGLPMVCGVSAPSSLAVALAHDFALTLIGFLREERFNIYTGQERVITP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 2 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 3 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 6 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 15 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 27 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 29 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 30 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 31 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 32 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 33 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 34 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 35 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 37 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 38 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 39 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 40 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 41 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 81 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 82 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 83 | 3300030745 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 | Metagenome | Rhizosphere |
| 84 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 85 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 86 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 87 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 88 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 89 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 90 | 3300034816 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 | Metagenome | Rhizosphere |
| 91 | 3300034820 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 | Metagenome | Rhizosphere |
| 92 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 93 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 94 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 95 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 96 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 97 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 98 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 99 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 100 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 101 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 102 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 103 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 104 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 105 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 106 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 107 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 108 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 109 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 110 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 111 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 112 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 113 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 114 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 115 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 116 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 117 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 136 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 137 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 138 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 139 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 140 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 141 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 142 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 143 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 144 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 147 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 148 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 149 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 150 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 151 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 152 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 153 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 154 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 155 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 156 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 157 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 158 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 159 | 3300053129 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere | Metagenome | Endosphere |
| 160 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 161 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 162 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 163 | 2873314349 | Sphaerisporangium siamense DSM 45784 | Isolate | Rhizosphere |
| 164 | 2515154155 | Actinopolymorpha alba DSM 45243 | Isolate | Rhizosphere |
| 165 | 2617270889 | Nostoc punctiforme PCC 73102 | Isolate | Unclassified |
| 166 | 2675903058 | Actinopolymorpha cephalotaxi CPCC 202808 | Isolate | Rhizosphere |
| 167 | 2675903060 | Nonomuraea wenchangensis CGMCC 4.5598 | Isolate | Rhizosphere |
| 168 | 2816332119 | Kribbella amoyensis DSM 24683 | Isolate | Rhizosphere |
| 169 | 2827628540 | Actinopolymorpha cephalotaxi DSM 45117 | Isolate | Rhizosphere |
| 170 | 2848694841 | Nostoc sp. RF31YmG | Isolate | Unclassified |
| 171 | 2849660919 | Nostoc sp. T09 | Isolate | Unclassified |
| 172 | 2856741275 | Microbispora triticiradicis NEAU-HRDPA2-9 | Isolate | Unclassified |
| 173 | 2891395885 | Microbispora catharanthi CR1-09 | Isolate | Unclassified |
| 174 | 2891554331 | Microbispora sp. CL1-1 | Isolate | Unclassified |
| 175 | 2891562705 | Microbispora tritici MT50 | Isolate | Unclassified |
| 176 | 2895427314 | Nonomuraea sp. PA05 | Isolate | Unclassified |
| 177 | 2913844669 | Nostocales cyanobacterium LEGE 12452 | Isolate | Unclassified |
| 178 | 2913912277 | Desmonostoc muscorum LEGE 12446 | Isolate | Unclassified |
| 179 | 2913939268 | Nostoc sp. LEGE 12447 | Isolate | Unclassified |
| 180 | 642555144 | Nostoc punctiforme PCC 73102 | Isolate | Unclassified |
| 181 | 8055066027 | Sphaerisporangium corydalis NEAU-YHS15 | Isolate | Unclassified |
| 182 | 8055172936 | Sphaerisporangium perillae NEAU-ZS1 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.95 |
| Metatranscriptomes | 0 |
| Isolates | 9.05 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.81 |
| Nodule | 0 |
| Rhizoplane | 5.88 |
| Rhizosphere | 83.26 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.71 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24739J22299_10009943 | 3300001989 | Bacteria | 3537 |
| 2 | JGI24737J22298_10019648 | 3300001990 | Bacteria | 2160 |
| 3 | Ga0070660_100200466 | 3300005339 | Bacteria | 1619 |
| 4 | Ga0070687_100000852 | 3300005343 | Bacteria | 10207 |
| 5 | Ga0070692_10018166 | 3300005345 | Bacteria | 3376 |
| 6 | Ga0070673_100291138 | 3300005364 | Unclassified | 1435 |
| 7 | Ga0070667_100671221 | 3300005367 | Bacteria | 958 |
| 8 | Ga0070714_100242592 | 3300005435 | Bacteria | 1663 |
| 9 | Ga0070714_100452553 | 3300005435 | Bacteria | 1220 |
| 10 | Ga0070701_10030373 | 3300005438 | Bacteria | 2673 |
| 11 | Ga0070700_100098002 | 3300005441 | Bacteria | 1927 |
| 12 | Ga0070708_100411851 | 3300005445 | Bacteria | 1275 |
| 13 | Ga0070678_100390066 | 3300005456 | Bacteria | 1207 |
| 14 | Ga0070662_100000193 | 3300005457 | Bacteria | 35601 |
| 15 | Ga0068867_100250567 | 3300005459 | Bacteria | 1440 |
| 16 | Ga0070685_10051909 | 3300005466 | Bacteria | 2371 |
| 17 | Ga0070706_100001934 | 3300005467 | Bacteria | 21350 |
| 18 | Ga0070707_100062461 | 3300005468 | Bacteria | 3573 |
| 19 | Ga0070707_100080351 | 3300005468 | Bacteria | 3147 |
| 20 | Ga0070698_100002204 | 3300005471 | Bacteria | 21610 |
| 21 | Ga0070698_100557978 | 3300005471 | Bacteria | 1085 |
| 22 | Ga0070699_100051747 | 3300005518 | Bacteria | 3556 |
| 23 | Ga0070699_100077298 | 3300005518 | Bacteria | 2897 |
| 24 | Ga0070684_100055564 | 3300005535 | Bacteria | 3452 |
| 25 | Ga0070697_100451310 | 3300005536 | Bacteria | 1120 |
| 26 | Ga0070686_100000092 | 3300005544 | Bacteria | 62767 |
| 27 | Ga0070686_100053088 | 3300005544 | Bacteria | 2586 |
| 28 | Ga0070696_100399954 | 3300005546 | Bacteria | 1074 |
| 29 | Ga0070693_100053522 | 3300005547 | Bacteria | 2318 |
| 30 | Ga0070704_100079061 | 3300005549 | Bacteria | 2415 |
| 31 | Ga0068855_100287220 | 3300005563 | Bacteria | 1825 |
| 32 | Ga0070664_100202280 | 3300005564 | Bacteria | 1773 |
| 33 | Ga0068857_100019454 | 3300005577 | Bacteria | 5963 |
| 34 | Ga0068857_100117549 | 3300005577 | Bacteria | 2392 |
| 35 | Ga0068852_100270657 | 3300005616 | Bacteria | 1634 |
| 36 | Ga0068858_100527696 | 3300005842 | Unclassified | 1142 |
| 37 | Ga0068860_100163099 | 3300005843 | Bacteria | 2150 |
| 38 | Ga0068860_100189145 | 3300005843 | Bacteria | 1992 |
| 39 | Ga0068862_100537040 | 3300005844 | Bacteria | 1115 |
| 40 | Ga0081538_10018029 | 3300005981 | Bacteria | 5326 |
| 41 | Ga0081539_10008036 | 3300005985 | Bacteria | 9348 |
| 42 | Ga0070717_10262761 | 3300006028 | Bacteria | 1527 |
| 43 | Ga0075363_100076293 | 3300006048 | Bacteria | 1827 |
| 44 | Ga0070716_100015982 | 3300006173 | Bacteria | 3867 |
| 45 | Ga0075428_100012599 | 3300006844 | Bacteria | 9401 |
| 46 | Ga0075434_100118578 | 3300006871 | Bacteria | 2660 |
| 47 | Ga0075436_100019909 | 3300006914 | Bacteria | 4603 |
| 48 | Ga0075436_100146502 | 3300006914 | Bacteria | 1661 |
| 49 | Ga0105240_10012557 | 3300009093 | Bacteria | 11685 |
| 50 | Ga0111539_10398452 | 3300009094 | Bacteria | 1603 |
| 51 | Ga0111539_10764160 | 3300009094 | Bacteria | 1125 |
| 52 | Ga0114129_10008857 | 3300009147 | Bacteria | 14359 |
| 53 | Ga0114129_10056250 | 3300009147 | Bacteria | 5511 |
| 54 | Ga0114129_10107051 | 3300009147 | Bacteria | 3862 |
| 55 | Ga0114129_10224937 | 3300009147 | Bacteria | 2530 |
| 56 | Ga0105243_10017219 | 3300009148 | Bacteria | 5466 |
| 57 | Ga0105241_10199000 | 3300009174 | Bacteria | 1672 |
| 58 | Ga0105242_10062835 | 3300009176 | Bacteria | 3057 |
| 59 | Ga0105248_10456330 | 3300009177 | Bacteria | 1440 |
| 60 | Ga0105238_10144087 | 3300009551 | Bacteria | 2359 |
| 61 | Ga0105239_10354428 | 3300010375 | Bacteria | 1657 |
| 62 | Ga0105246_10166172 | 3300011119 | Bacteria | 1685 |
| 63 | Ga0157369_10499504 | 3300013105 | Bacteria | 1258 |
| 64 | Ga0157374_10000001 | 3300013296 | Bacteria | 1077351 |
| 65 | Ga0163162_10272117 | 3300013306 | Bacteria | 1826 |
| 66 | Ga0157375_10110411 | 3300013308 | Bacteria | 2847 |
| 67 | Ga0163163_10253359 | 3300014325 | Bacteria | 1811 |
| 68 | Ga0157376_10010473 | 3300014969 | Bacteria | 6783 |
| 69 | Ga0157376_10094986 | 3300014969 | Bacteria | 2592 |
| 70 | Ga0207647_10012549 | 3300025904 | Bacteria | 5894 |
| 71 | Ga0207699_10032605 | 3300025906 | Bacteria | 2936 |
| 72 | Ga0207695_10024024 | 3300025913 | Bacteria | 6871 |
| 73 | Ga0207693_10026347 | 3300025915 | Bacteria | 4601 |
| 74 | Ga0207663_10127115 | 3300025916 | Bacteria | 1755 |
| 75 | Ga0207663_10398243 | 3300025916 | Bacteria | 1052 |
| 76 | Ga0207662_10031098 | 3300025918 | Bacteria | 3101 |
| 77 | Ga0207657_10038959 | 3300025919 | Bacteria | 4226 |
| 78 | Ga0207646_10081109 | 3300025922 | Bacteria | 2901 |
| 79 | Ga0207694_10000023 | 3300025924 | Bacteria | 259621 |
| 80 | Ga0207694_10075337 | 3300025924 | Bacteria | 2641 |
| 81 | Ga0207650_10338082 | 3300025925 | Bacteria | 1236 |
| 82 | Ga0207664_10398682 | 3300025929 | Bacteria | 1223 |
| 83 | Ga0207706_10000241 | 3300025933 | Bacteria | 60341 |
| 84 | Ga0207709_10149287 | 3300025935 | Bacteria | 1617 |
| 85 | Ga0207661_10210475 | 3300025944 | Bacteria | 1713 |
| 86 | Ga0207679_10200914 | 3300025945 | Bacteria | 1665 |
| 87 | Ga0207651_10296557 | 3300025960 | Unclassified | 1343 |
| 88 | Ga0207677_10057592 | 3300026023 | Bacteria | 2669 |
| 89 | Ga0207708_10008367 | 3300026075 | Bacteria | 7658 |
| 90 | Ga0207641_10489742 | 3300026088 | Bacteria | 1193 |
| 91 | Ga0207648_10018939 | 3300026089 | Bacteria | 6219 |
| 92 | Ga0207674_10025657 | 3300026116 | Bacteria | 6277 |
| 93 | Ga0207698_10074763 | 3300026142 | Bacteria | 2704 |
| 94 | Ga0268264_10164698 | 3300028381 | Bacteria | 2001 |
| 95 | Ga0265336_10007916 | 3300028666 | Bacteria | 3753 |
| 96 | Ga0265338_10000175 | 3300028800 | Bacteria | 118915 |
| 97 | Ga0307512_10166579 | 3300030522 | Bacteria | 1275 |
| 98 | Ga0316182_1181041 | 3300030745 | Bacteria | 1902 |
| 99 | Ga0307513_10120683 | 3300031456 | Bacteria | 2590 |
| 100 | Ga0307408_100096316 | 3300031548 | Bacteria | 2245 |
| 101 | Ga0307408_100545111 | 3300031548 | Bacteria | 1023 |
| 102 | Ga0307407_10096133 | 3300031903 | Bacteria | 1828 |
| 103 | Ga0307414_10204187 | 3300032004 | Bacteria | 1610 |
| 104 | Ga0307411_10229585 | 3300032005 | Bacteria | 1446 |
| 105 | Ga0307507_10118169 | 3300033179 | Bacteria | 2133 |
| 106 | Ga0307507_10185384 | 3300033179 | Bacteria | 1477 |
| 107 | Ga0373930_0023142 | 3300034816 | Bacteria | 1234 |
| 108 | Ga0373959_0000497 | 3300034820 | Bacteria | 7099 |
| 109 | Ga0373934_0067041 | 3300035086 | Bacteria | 1433 |
| 110 | Ga0373934_0096025 | 3300035086 | Bacteria | 1197 |
| 111 | Ga0373944_0000569 | 3300035089 | Bacteria | 8727 |
| 112 | Ga0373923_0044609 | 3300035111 | Bacteria | 1838 |
| 113 | Ga0373936_0006027 | 3300035113 | Bacteria | 4568 |
| 114 | Ga0373936_0036014 | 3300035113 | Bacteria | 1972 |
| 115 | Ga0373945_0036565 | 3300035116 | Bacteria | 1759 |
| 116 | Ga0373954_0047218 | 3300035118 | Bacteria | 2015 |
| 117 | Ga0373954_0170229 | 3300035118 | Bacteria | 1067 |
| 118 | Ga0373946_0000287 | 3300035171 | Bacteria | 16222 |
| 119 | Ga0373955_0145204 | 3300035172 | Bacteria | 1393 |
| 120 | Ga0373924_0040596 | 3300035410 | Bacteria | 1905 |
| 121 | Ga0373935_0000613 | 3300035692 | Bacteria | 18691 |
| 122 | Ga0373927_0000228 | 3300035695 | Bacteria | 44486 |
| 123 | Ga0373947_0002080 | 3300035725 | Bacteria | 12218 |
| 124 | Ga0373947_0075353 | 3300035725 | Bacteria | 2077 |
| 125 | Ga0373937_0038597 | 3300036401 | Bacteria | 4351 |
| 126 | Ga0373937_0196979 | 3300036401 | Bacteria | 1893 |
| 127 | Ga0373937_0331058 | 3300036401 | Bacteria | 1441 |
| 128 | Ga0373925_0105901 | 3300037068 | Bacteria | 2167 |
| 129 | Ga0373925_0202073 | 3300037068 | Bacteria | 1580 |
| 130 | Ga0436364_0996616 | 3300037853 | Bacteria | 2021 |
| 131 | Ga0436365_0314338 | 3300039437 | Bacteria | 1140 |
| 132 | Ga0436360_0769671 | 3300039438 | Bacteria | 5056 |
| 133 | Ga0436361_0511289 | 3300039447 | Bacteria | 1631 |
| 134 | Ga0436362_0305678 | 3300039453 | Bacteria | 973 |
| 135 | Ga0436362_0439206 | 3300039453 | Bacteria | 2631 |
| 136 | Ga0453683_0002196 | 3300044673 | Bacteria | 15517 |
| 137 | Ga0466963_0103844 | 3300044694 | Bacteria | 1947 |
| 138 | Ga0466960_0297702 | 3300044901 | Bacteria | 908 |
| 139 | Ga0466959_0264593 | 3300045049 | Unclassified | 1183 |
| 140 | Ga0451576_0004466 | 3300045051 | Bacteria | 18128 |
| 141 | Ga0466967_0406417 | 3300045976 | Bacteria | 1325 |
| 142 | Ga0495627_014903 | 3300046453 | Plasmid | 2697 |
| 143 | Ga0495603_0181715 | 3300046455 | Bacteria | 1217 |
| 144 | Ga0495651_0029456 | 3300046462 | Bacteria | 4281 |
| 145 | Ga0495653_0020522 | 3300046463 | Bacteria | 5356 |
| 146 | Ga0495653_0039448 | 3300046463 | Bacteria | 3699 |
| 147 | Ga0495662_0050548 | 3300046476 | Bacteria | 2007 |
| 148 | Ga0495664_0000498 | 3300046477 | Bacteria | 19569 |
| 149 | Ga0495618_0197376 | 3300046514 | Bacteria | 1274 |
| 150 | Ga0495628_0068073 | 3300046516 | Bacteria | 2779 |
| 151 | Ga0495630_0040569 | 3300046517 | Bacteria | 3479 |
| 152 | Ga0495643_0000043 | 3300046522 | Bacteria | 226821 |
| 153 | Ga0495645_0070825 | 3300046543 | Bacteria | 2516 |
| 154 | Ga0495645_0315248 | 3300046543 | Bacteria | 1017 |
| 155 | Ga0495633_0000123 | 3300046558 | Bacteria | 104682 |
| 156 | Ga0495667_0004905 | 3300046559 | Bacteria | 9045 |
| 157 | Ga0495667_0017752 | 3300046559 | Bacteria | 4805 |
| 158 | Ga0495635_0003403 | 3300046663 | Bacteria | 10996 |
| 159 | Ga0495635_0109388 | 3300046663 | Bacteria | 1888 |
| 160 | Ga0495624_0201974 | 3300046690 | Bacteria | 1207 |
| 161 | Ga0495600_0062888 | 3300046809 | Bacteria | 2425 |
| 162 | Ga0495674_0004298 | 3300047319 | Bacteria | 13706 |
| 163 | Ga0495680_0032021 | 3300047322 | Bacteria | 4272 |
| 164 | Ga0495680_0062628 | 3300047322 | Bacteria | 2859 |
| 165 | Ga0495680_0486503 | 3300047322 | Bacteria | 840 |
| 166 | Ga0496106_0086142 | 3300048909 | Bacteria | 2419 |
| 167 | Ga0496106_0157794 | 3300048909 | Unclassified | 1793 |
| 168 | Ga0496107_0242337 | 3300048910 | Unclassified | 1342 |
| 169 | Ga0496107_0485589 | 3300048910 | Bacteria | 916 |
| 170 | Ga0496108_0043571 | 3300048911 | Bacteria | 3748 |
| 171 | Ga0496108_0253622 | 3300048911 | Bacteria | 1531 |
| 172 | Ga0496109_0035960 | 3300048912 | Bacteria | 4471 |
| 173 | Ga0496109_0228802 | 3300048912 | Bacteria | 1749 |
| 174 | Ga0496110_0260232 | 3300048913 | Bacteria | 1579 |
| 175 | Ga0496110_0478173 | 3300048913 | Bacteria | 1135 |
| 176 | Ga0496111_0121521 | 3300048914 | Bacteria | 1929 |
| 177 | Ga0496112_0015959 | 3300048915 | Bacteria | 7022 |
| 178 | Ga0496114_0019634 | 3300048917 | Bacteria | 5476 |
| 179 | Ga0501037_0227182 | 3300049573 | Bacteria | 1311 |
| 180 | Ga0501067_0000153 | 3300049583 | Bacteria | 38244 |
| 181 | Ga0501068_0000010 | 3300049584 | Bacteria | 66003 |
| 182 | Ga0501069_0000167 | 3300049585 | Bacteria | 29264 |
| 183 | Ga0501070_0006709 | 3300049586 | Bacteria | 9807 |
| 184 | nmdc:mga03n38_56632_c1 | 3300050490 | Bacteria | 1770 |
| 185 | nmdc:mga07m45_122460_c1 | 3300050496 | Bacteria | 1502 |
| 186 | nmdc:mga05p37_662488_c1 | 3300050507 | Bacteria | 1166 |
| 187 | nmdc:mga05p37_90135_c1 | 3300050507 | Bacteria | 3779 |
| 188 | nmdc:mga09592_10701_c1 | 3300050508 | Bacteria | 7468 |
| 189 | nmdc:mga0qj67_27266_c1 | 3300050509 | Bacteria | 4426 |
| 190 | nmdc:mga0n895_220334_c1 | 3300050512 | Bacteria | 1926 |
| 191 | nmdc:mga0rr50_359957_c1 | 3300050513 | Bacteria | 1224 |
| 192 | nmdc:mga08x19_122367_c1 | 3300050514 | Bacteria | 1745 |
| 193 | nmdc:mga08x19_123954_c1 | 3300050514 | Bacteria | 1734 |
| 194 | nmdc:mga0a205_9163_c1 | 3300050515 | Bacteria | 9034 |
| 195 | Ga0495601_0069369 | 3300053077 | Bacteria | 2249 |
| 196 | Ga0495595_0036460 | 3300053084 | Bacteria | 2232 |
| 197 | Ga0495595_0215426 | 3300053084 | Bacteria | 958 |
| 198 | Ga0500628_000490 | 3300053129 | Bacteria | 7343 |
| 199 | Ga0501084_0122765 | 3300054114 | Bacteria | 2185 |
| 200 | Ga0590075_000995 | 3300059424 | Bacteria | 7340 |
| 201 | Ga0530510_0053044 | 3300061734 | Bacteria | 2930 |
| 202 | 2873321944 | 2873314349 | Bacteria | 8512634 |
| 203 | 2515851004 | 2515154155 | Bacteria | 7985436 |
| 204 | 2617912093 | 2617270889 | Bacteria | 9064343 |
| 205 | 2676476676 | 2675903058 | Bacteria | 6822861 |
| 206 | 2676494263 | 2675903060 | Bacteria | 10051191 |
| 207 | 2816425581 | 2816332119 | Bacteria | 8120218 |
| 208 | 2827630237 | 2827628540 | Bacteria | 6858585 |
| 209 | 2848697845 | 2848694841 | Bacteria | 9205737 |
| 210 | 2849661937 | 2849660919 | Bacteria | 8251853 |
| 211 | 2856745213 | 2856741275 | Bacteria | 8096094 |
| 212 | 2891401640 | 2891395885 | Bacteria | 9251614 |
| 213 | 2891560422 | 2891554331 | Bacteria | 8812224 |
| 214 | 2891567123 | 2891562705 | Bacteria | 8039471 |
| 215 | 2895431495 | 2895427314 | Bacteria | 13147766 |
| 216 | 2913846348 | 2913844669 | Bacteria | 8381711 |
| 217 | 2913912334 | 2913912277 | Bacteria | 9037797 |
| 218 | 2913940324 | 2913939268 | Bacteria | 8559644 |
| 219 | 642599927 | 642555144 | Bacteria | 9059191 |
| 220 | 8055071434 | 8055066027 | Bacteria | 9479577 |
| 221 | 8055174952 | 8055172936 | Bacteria | 9305943 |
| 222 | JGI24739J22299_10009943 | |||
| 223 | JGI24737J22298_10019648 | |||
| 224 | Ga0070660_100200466 | |||
| 225 | Ga0070687_100000852 | |||
| 226 | Ga0070692_10018166 | |||
| 227 | Ga0070673_100291138 | |||
| 228 | Ga0070667_100671221 | |||
| 229 | Ga0070714_100242592 | |||
| 230 | Ga0070714_100452553 | |||
| 231 | Ga0070701_10030373 | |||
| 232 | Ga0070700_100098002 | |||
| 233 | Ga0070708_100411851 | |||
| 234 | Ga0070678_100390066 | |||
| 235 | Ga0070662_100000193 | |||
| 236 | Ga0068867_100250567 | |||
| 237 | Ga0070685_10051909 | |||
| 238 | Ga0070706_100001934 | |||
| 239 | Ga0070707_100062461 | |||
| 240 | Ga0070707_100080351 | |||
| 241 | Ga0070698_100002204 | |||
| 242 | Ga0070698_100557978 | |||
| 243 | Ga0070699_100051747 | |||
| 244 | Ga0070699_100077298 | |||
| 245 | Ga0070684_100055564 | |||
| 246 | Ga0070697_100451310 | |||
| 247 | Ga0070686_100000092 | |||
| 248 | Ga0070686_100053088 | |||
| 249 | Ga0070696_100399954 | |||
| 250 | Ga0070693_100053522 | |||
| 251 | Ga0070704_100079061 | |||
| 252 | Ga0068855_100287220 | |||
| 253 | Ga0070664_100202280 | |||
| 254 | Ga0068857_100019454 | |||
| 255 | Ga0068857_100117549 | |||
| 256 | Ga0068852_100270657 | |||
| 257 | Ga0068858_100527696 | |||
| 258 | Ga0068860_100163099 | |||
| 259 | Ga0068860_100189145 | |||
| 260 | Ga0068862_100537040 | |||
| 261 | Ga0081538_10018029 | |||
| 262 | Ga0081539_10008036 | |||
| 263 | Ga0070717_10262761 | |||
| 264 | Ga0075363_100076293 | |||
| 265 | Ga0070716_100015982 | |||
| 266 | Ga0075428_100012599 | |||
| 267 | Ga0075434_100118578 | |||
| 268 | Ga0075436_100019909 | |||
| 269 | Ga0075436_100146502 | |||
| 270 | Ga0105240_10012557 | |||
| 271 | Ga0111539_10398452 | |||
| 272 | Ga0111539_10764160 | |||
| 273 | Ga0114129_10008857 | |||
| 274 | Ga0114129_10056250 | |||
| 275 | Ga0114129_10107051 | |||
| 276 | Ga0114129_10224937 | |||
| 277 | Ga0105243_10017219 | |||
| 278 | Ga0105241_10199000 | |||
| 279 | Ga0105242_10062835 | |||
| 280 | Ga0105248_10456330 | |||
| 281 | Ga0105238_10144087 | |||
| 282 | Ga0105239_10354428 | |||
| 283 | Ga0105246_10166172 | |||
| 284 | Ga0157369_10499504 | |||
| 285 | Ga0157374_10000001 | |||
| 286 | Ga0163162_10272117 | |||
| 287 | Ga0157375_10110411 | |||
| 288 | Ga0163163_10253359 | |||
| 289 | Ga0157376_10010473 | |||
| 290 | Ga0157376_10094986 | |||
| 291 | Ga0207647_10012549 | |||
| 292 | Ga0207699_10032605 | |||
| 293 | Ga0207695_10024024 | |||
| 294 | Ga0207693_10026347 | |||
| 295 | Ga0207663_10127115 | |||
| 296 | Ga0207663_10398243 | |||
| 297 | Ga0207662_10031098 | |||
| 298 | Ga0207657_10038959 | |||
| 299 | Ga0207646_10081109 | |||
| 300 | Ga0207694_10000023 | |||
| 301 | Ga0207694_10075337 | |||
| 302 | Ga0207650_10338082 | |||
| 303 | Ga0207664_10398682 | |||
| 304 | Ga0207706_10000241 | |||
| 305 | Ga0207709_10149287 | |||
| 306 | Ga0207661_10210475 | |||
| 307 | Ga0207679_10200914 | |||
| 308 | Ga0207651_10296557 | |||
| 309 | Ga0207677_10057592 | |||
| 310 | Ga0207708_10008367 | |||
| 311 | Ga0207641_10489742 | |||
| 312 | Ga0207648_10018939 | |||
| 313 | Ga0207674_10025657 | |||
| 314 | Ga0207698_10074763 | |||
| 315 | Ga0268264_10164698 | |||
| 316 | Ga0265336_10007916 | |||
| 317 | Ga0265338_10000175 | |||
| 318 | Ga0307512_10166579 | |||
| 319 | Ga0316182_1181041 | |||
| 320 | Ga0307513_10120683 | |||
| 321 | Ga0307408_100096316 | |||
| 322 | Ga0307408_100545111 | |||
| 323 | Ga0307407_10096133 | |||
| 324 | Ga0307414_10204187 | |||
| 325 | Ga0307411_10229585 | |||
| 326 | Ga0307507_10118169 | |||
| 327 | Ga0307507_10185384 | |||
| 328 | Ga0373930_0023142 | |||
| 329 | Ga0373959_0000497 | |||
| 330 | Ga0373934_0067041 | |||
| 331 | Ga0373934_0096025 | |||
| 332 | Ga0373944_0000569 | |||
| 333 | Ga0373923_0044609 | |||
| 334 | Ga0373936_0006027 | |||
| 335 | Ga0373936_0036014 | |||
| 336 | Ga0373945_0036565 | |||
| 337 | Ga0373954_0047218 | |||
| 338 | Ga0373954_0170229 | |||
| 339 | Ga0373946_0000287 | |||
| 340 | Ga0373955_0145204 | |||
| 341 | Ga0373924_0040596 | |||
| 342 | Ga0373935_0000613 | |||
| 343 | Ga0373927_0000228 | |||
| 344 | Ga0373947_0002080 | |||
| 345 | Ga0373947_0075353 | |||
| 346 | Ga0373937_0038597 | |||
| 347 | Ga0373937_0196979 | |||
| 348 | Ga0373937_0331058 | |||
| 349 | Ga0373925_0105901 | |||
| 350 | Ga0373925_0202073 | |||
| 351 | Ga0436364_0996616 | |||
| 352 | Ga0436365_0314338 | |||
| 353 | Ga0436360_0769671 | |||
| 354 | Ga0436361_0511289 | |||
| 355 | Ga0436362_0305678 | |||
| 356 | Ga0436362_0439206 | |||
| 357 | Ga0453683_0002196 | |||
| 358 | Ga0466963_0103844 | |||
| 359 | Ga0466960_0297702 | |||
| 360 | Ga0466959_0264593 | |||
| 361 | Ga0451576_0004466 | |||
| 362 | Ga0466967_0406417 | |||
| 363 | Ga0495627_014903 | |||
| 364 | Ga0495603_0181715 | |||
| 365 | Ga0495651_0029456 | |||
| 366 | Ga0495653_0020522 | |||
| 367 | Ga0495653_0039448 | |||
| 368 | Ga0495662_0050548 | |||
| 369 | Ga0495664_0000498 | |||
| 370 | Ga0495618_0197376 | |||
| 371 | Ga0495628_0068073 | |||
| 372 | Ga0495630_0040569 | |||
| 373 | Ga0495643_0000043 | |||
| 374 | Ga0495645_0070825 | |||
| 375 | Ga0495645_0315248 | |||
| 376 | Ga0495633_0000123 | |||
| 377 | Ga0495667_0004905 | |||
| 378 | Ga0495667_0017752 | |||
| 379 | Ga0495635_0003403 | |||
| 380 | Ga0495635_0109388 | |||
| 381 | Ga0495624_0201974 | |||
| 382 | Ga0495600_0062888 | |||
| 383 | Ga0495674_0004298 | |||
| 384 | Ga0495680_0032021 | |||
| 385 | Ga0495680_0062628 | |||
| 386 | Ga0495680_0486503 | |||
| 387 | Ga0496106_0086142 | |||
| 388 | Ga0496106_0157794 | |||
| 389 | Ga0496107_0242337 | |||
| 390 | Ga0496107_0485589 | |||
| 391 | Ga0496108_0043571 | |||
| 392 | Ga0496108_0253622 | |||
| 393 | Ga0496109_0035960 | |||
| 394 | Ga0496109_0228802 | |||
| 395 | Ga0496110_0260232 | |||
| 396 | Ga0496110_0478173 | |||
| 397 | Ga0496111_0121521 | |||
| 398 | Ga0496112_0015959 | |||
| 399 | Ga0496114_0019634 | |||
| 400 | Ga0501037_0227182 | |||
| 401 | Ga0501067_0000153 | |||
| 402 | Ga0501068_0000010 | |||
| 403 | Ga0501069_0000167 | |||
| 404 | Ga0501070_0006709 | |||
| 405 | nmdc:mga03n38_56632_c1 | |||
| 406 | nmdc:mga07m45_122460_c1 | |||
| 407 | nmdc:mga05p37_662488_c1 | |||
| 408 | nmdc:mga05p37_90135_c1 | |||
| 409 | nmdc:mga09592_10701_c1 | |||
| 410 | nmdc:mga0qj67_27266_c1 | |||
| 411 | nmdc:mga0n895_220334_c1 | |||
| 412 | nmdc:mga0rr50_359957_c1 | |||
| 413 | nmdc:mga08x19_122367_c1 | |||
| 414 | nmdc:mga08x19_123954_c1 | |||
| 415 | nmdc:mga0a205_9163_c1 | |||
| 416 | Ga0495601_0069369 | |||
| 417 | Ga0495595_0036460 | |||
| 418 | Ga0495595_0215426 | |||
| 419 | Ga0500628_000490 | |||
| 420 | Ga0501084_0122765 | |||
| 421 | Ga0590075_000995 | |||
| 422 | Ga0530510_0053044 | |||
| 423 | 2873321944 | |||
| 424 | 2515851004 | |||
| 425 | 2617912093 | |||
| 426 | 2676476676 | |||
| 427 | 2676494263 | |||
| 428 | 2816425581 | |||
| 429 | 2827630237 | |||
| 430 | 2848697845 | |||
| 431 | 2849661937 | |||
| 432 | 2856745213 | |||
| 433 | 2891401640 | |||
| 434 | 2891560422 | |||
| 435 | 2891567123 | |||
| 436 | 2895431495 | |||
| 437 | 2913846348 | |||
| 438 | 2913912334 | |||
| 439 | 2913940324 | |||
| 440 | 642599927 | |||
| 441 | 8055071434 | |||
| 442 | 8055174952 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2pw9-assembly2.cif.gz_C | crystal structure of a putative formate dehydrogenase accessory protein from desulfotalea psychrophila | 0.9089 | 6 | 274 |
| 2pw9-assembly2.cif.gz_C | crystal structure of a putative formate dehydrogenase accessory protein from desulfotalea psychrophila | 0.8972 | 6 | 274 |
| 2pw9-assembly1.cif.gz_B | crystal structure of a putative formate dehydrogenase accessory protein from desulfotalea psychrophila | 0.8962 | 6 | 274 |
| 2pw9-assembly1.cif.gz_A | crystal structure of a putative formate dehydrogenase accessory protein from desulfotalea psychrophila | 0.8944 | 6 | 274 |
| 2pw9-assembly2.cif.gz_D | crystal structure of a putative formate dehydrogenase accessory protein from desulfotalea psychrophila | 0.8912 | 5 | 274 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WNF1_130_276_3.40.140.10 | Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 | 0.9804 | 139 | 274 | 3.40.140.10 |
| 2pw9C03 | Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 | 0.9235 | 135 | 274 | 3.40.140.10 |
| af_Q2FVX3_117_265_3.40.140.10 | Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 | 0.9194 | 135 | 275 | 3.40.140.10 |
| 2pw9C03 | Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 | 0.9172 | 135 | 274 | 3.40.140.10 |
| af_P32177_133_277_3.40.140.10 | Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 | 0.9046 | 136 | 274 | 3.40.140.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7C3C7J7-F1-model_v4 | Sulfurtransferase FdhD | 0.9836 | 211 | 274 |
GO:0005737
GO:0006777 GO:0016783 |
| AF-A0A259S4K6-F1-model_v4 | Formate dehydrogenase family accessory protein FdhD | 0.9793 | 149 | 277 |
GO:0005737
GO:0006777 GO:0016783 |
| AF-A0A7L4PM98-F1-model_v4 | Sulfurtransferase FdhD | 0.977 | 167 | 273 |
GO:0005737
GO:0006777 GO:0016783 |
| AF-A0A538FDV7-F1-model_v4 | Sulfurtransferase FdhD | 0.9764 | 172 | 274 |
GO:0005737
GO:0006777 GO:0016783 |
| AF-A0A1V5J339-F1-model_v4 | Formate dehydrogenase accessory protein | 0.9755 | 153 | 274 |
GO:0005737
GO:0006777 GO:0016783 |