F333467

General Info

Members Datasets Scaffolds Average Seq Length
221 152 442 459

Family's Representative Sequence

Representative Sequence 3300027364|Ga0209967_1001354|Ga0209967_10013542
Length 528
Sequence MNPPLLEELPYAPDSGALFEAIADLPWAVFLDSGQHHPGQSRYDILAAEPYARLLTRGNLTEIQGDGVQLSRDDPFALIARLLDITPTSGELPFSGGAIGYFGYDLARRLEAFPVRARDAERIPDMAVGFYDWAVVVDHCEHRSWLVGQGRDPETDVKWDSLVARFTQPVRERARAPFRITSPVVSNMTRERYGRAFRRIQQYIRDGDCYQVNLAQRFEAQAGGDPWLAYQALRVLNPAPYSAYLNTPYAQVLSASPERFLKVESGRVEARPIKGTRPRAGHPRLDAQQIEVLRTSEKDRAENVMIVDLLRNDLSKNCSTGSVRVPKLFEVESFATVHHLVSTVTGELAPGRNALDLLRGCFPGGSITGAPKRRAMQIIEELEPHRRGVYCGAVGYIGFDGDMDLNIAIRTLTLSRGVIRCYAGGGIVADSREADEYQETFDKAAAMLKLLQQFSHAVSIRETLRPAKLVYDPFIIFDASHYLHRFHYDHLRAAQGTNDVLGAQQLIDRFSEIWEACGPAVSANVSGL

Samples

Sample ID Description Type Environment
1 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
45 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
46 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
47 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
48 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
64 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
71 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
72 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
73 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
74 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
79 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
83 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
84 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
87 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
88 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
90 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
93 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
94 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
95 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
96 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
97 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
98 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
99 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
100 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
101 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
102 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
103 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
114 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
120 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
121 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
126 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
127 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
128 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
129 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
130 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
131 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
132 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
133 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
134 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
135 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
136 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
137 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
138 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
139 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
140 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
141 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
142 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
143 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
144 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
145 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
146 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
147 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
148 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
149 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
150 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
151 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
152 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.33
Metatranscriptomes 0.9
Isolates 11.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.9
Nodule 3.62
Rhizoplane 4.98
Rhizosphere 61.09
Stem 0
Stem Tuber 0
Unclassified 0.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209967_1001354 3300027364 Bacteria 3146
2 Ga0068869_100153231 3300005334 Bacteria 1789
3 Ga0070666_10017188 3300005335 Bacteria 4635
4 Ga0068868_100000902 3300005338 Bacteria 20203
5 Ga0070689_100029374 3300005340 Bacteria 4161
6 Ga0070671_100000467 3300005355 Bacteria 28148
7 Ga0070667_100000958 3300005367 Bacteria 26582
8 Ga0070700_100052152 3300005441 Bacteria 2549
9 Ga0070694_100063190 3300005444 Bacteria 2531
10 Ga0070708_100248656 3300005445 Bacteria 1670
11 Ga0070681_10006932 3300005458 Bacteria 11028
12 Ga0070707_100025358 3300005468 Bacteria 5624
13 Ga0070699_100060027 3300005518 Bacteria 3294
14 Ga0070697_100195698 3300005536 Bacteria 1717
15 Ga0070665_100041103 3300005548 Bacteria 4647
16 Ga0070704_100015098 3300005549 Bacteria 4842
17 Ga0070664_100010818 3300005564 Bacteria 7399
18 Ga0070702_100009262 3300005615 Bacteria 4813
19 Ga0068852_100056524 3300005616 Bacteria 3392
20 Ga0068859_100025096 3300005617 Bacteria 5982
21 Ga0068864_100017293 3300005618 Bacteria 6010
22 Ga0068863_100000398 3300005841 Bacteria 44189
23 Ga0068858_100009411 3300005842 Bacteria 9323
24 Ga0068860_100035024 3300005843 Bacteria 4817
25 Ga0097621_100020727 3300006237 Bacteria 5070
26 Ga0068871_100009883 3300006358 Bacteria 6927
27 Ga0068871_100040893 3300006358 Bacteria 3715
28 Ga0075430_100109461 3300006846 Bacteria 2305
29 Ga0075431_100101027 3300006847 Bacteria 2976
30 Ga0097620_100025095 3300006931 Bacteria 5982
31 Ga0099794_10005059 3300007265 Bacteria 5253
32 Ga0099794_10051176 3300007265 Bacteria 1988
33 Ga0111539_10050465 3300009094 Bacteria 4957
34 Ga0111539_10118694 3300009094 Bacteria 3100
35 Ga0111539_10186255 3300009094 Bacteria 2424
36 Ga0105245_10001102 3300009098 Bacteria 24450
37 Ga0105247_10008507 3300009101 Bacteria 6250
38 Ga0105241_10053987 3300009174 Bacteria 3075
39 Ga0105242_10025992 3300009176 Bacteria 4637
40 Ga0105248_10000958 3300009177 Bacteria 32144
41 Ga0105238_10116356 3300009551 Bacteria 2653
42 Ga0105239_10083799 3300010375 Bacteria 3511
43 Ga0163162_10010067 3300013306 Bacteria 9194
44 Ga0157375_10252861 3300013308 Bacteria 1923
45 Ga0157375_10306450 3300013308 Bacteria 1752
46 Ga0163163_10000472 3300014325 Bacteria 36730
47 Ga0157379_10001694 3300014968 Bacteria 18224
48 Ga0157376_10011455 3300014969 Bacteria 6538
49 Ga0214544_1001246 3300021320 Bacteria 51992
50 Ga0214542_1001948 3300021321 Bacteria 42768
51 Ga0214545_1000914 3300021324 Bacteria 51992
52 Ga0214543_1001723 3300021327 Bacteria 42768
53 Ga0207680_10015028 3300025903 Bacteria 4028
54 Ga0207684_10145270 3300025910 Bacteria 2040
55 Ga0207707_10049760 3300025912 Bacteria 3651
56 Ga0207650_10163174 3300025925 Bacteria 1767
57 Ga0207644_10013895 3300025931 Bacteria 5378
58 Ga0207670_10068993 3300025936 Bacteria 2437
59 Ga0207689_10170536 3300025942 Bacteria 1794
60 Ga0207658_10067915 3300025986 Bacteria 2687
61 Ga0207677_10002101 3300026023 Bacteria 10480
62 Ga0207703_10011054 3300026035 Bacteria 7034
63 Ga0207708_10002988 3300026075 Bacteria 12459
64 Ga0207676_10002181 3300026095 Bacteria 14116
65 Ga0207675_100003212 3300026118 Bacteria 16026
66 Ga0207683_10000104 3300026121 Bacteria 69720
67 Ga0209969_1000440 3300027360 Bacteria 5567
68 Ga0209700_100076 3300027363 Bacteria 138075
69 Ga0209995_1001006 3300027471 Bacteria 4334
70 Ga0209974_10007925 3300027876 Bacteria 3642
71 Ga0207428_10118018 3300027907 Bacteria 2036
72 Ga0268266_10021591 3300028379 Bacteria 5484
73 Ga0268265_10007202 3300028380 Bacteria 7517
74 Ga0268264_10075700 3300028381 Bacteria 2862
75 Ga0265319_1008159 3300028563 Bacteria 4617
76 Ga0265319_1013093 3300028563 Bacteria 3317
77 Ga0265318_10042003 3300028577 Bacteria 1736
78 Ga0265324_10001409 3300029957 Bacteria 13827
79 Ga0265330_10005016 3300031235 Bacteria 6642
80 Ga0265328_10000067 3300031239 Bacteria 57310
81 Ga0265328_10014957 3300031239 Bacteria 3048
82 Ga0265320_10007667 3300031240 Bacteria 6677
83 Ga0265320_10026825 3300031240 Bacteria 3011
84 Ga0265331_10000012 3300031250 Bacteria 297201
85 Ga0265331_10011359 3300031250 Bacteria 4881
86 Ga0265327_10000734 3300031251 Bacteria 51220
87 Ga0265327_10001179 3300031251 Bacteria 35436
88 Ga0265327_10001186 3300031251 Bacteria 35330
89 Ga0265327_10001289 3300031251 Bacteria 32900
90 Ga0265327_10001441 3300031251 Bacteria 29977
91 Ga0265327_10001664 3300031251 Bacteria 26733
92 Ga0265327_10008535 3300031251 Bacteria 7608
93 Ga0265327_10015742 3300031251 Bacteria 4858
94 Ga0265316_10001175 3300031344 Bacteria 28360
95 Ga0316575_10004558 3300031665 Bacteria 4879
96 Ga0316575_10058167 3300031665 Bacteria 1542
97 Ga0265314_10000772 3300031711 Bacteria 38169
98 Ga0265314_10076255 3300031711 Bacteria 2228
99 Ga0316576_10001699 3300031727 Bacteria 12071
100 Ga0316576_10007804 3300031727 Bacteria 6761
101 Ga0316578_10024086 3300031728 Bacteria 3412
102 Ga0316578_10068895 3300031728 Bacteria 2093
103 Ga0307516_10126748 3300031730 Bacteria 2337
104 Ga0316577_10016958 3300031733 Bacteria 4019
105 Ga0307416_100083787 3300032002 Bacteria 2707
106 Ga0307411_10092950 3300032005 Bacteria 2111
107 Ga0316580_10001963 3300032139 Bacteria 5547
108 Ga0316580_10008823 3300032139 Bacteria 3027
109 Ga0316593_10000148 3300032168 Bacteria 9979
110 Ga0316593_10002782 3300032168 Bacteria 4226
111 Ga0373952_0000932 3300035092 Bacteria 5318
112 Ga0316574_0008963 3300035398 Bacteria 5586
113 Ga0373937_0013599 3300036401 Bacteria 7171
114 Ga0373937_0017664 3300036401 Bacteria 6364
115 Ga0316582_0002498 3300036647 Bacteria 8664
116 Ga0316582_0105921 3300036647 Bacteria 1867
117 Ga0316584_0004212 3300036712 Bacteria 9494
118 Ga0316584_0014780 3300036712 Bacteria 5573
119 Ga0316584_0016840 3300036712 Bacteria 5245
120 Ga0316584_0082892 3300036712 Bacteria 2402
121 Ga0316581_0030788 3300037588 Bacteria 1616
122 Ga0400484_07526 3300038725 Bacteria 4541
123 Ga0400484_10922 3300038725 Bacteria 10038
124 Ga0400484_37422 3300038725 Bacteria 20191
125 Ga0400490_09944 3300038726 Bacteria 75928
126 Ga0400490_27862 3300038726 Bacteria 45183
127 Ga0400490_29790 3300038726 Bacteria 76189
128 Ga0400490_33350 3300038726 Bacteria 5444
129 Ga0400490_33994 3300038726 Bacteria 37466
130 Ga0400491_00751 3300038727 Bacteria 8000
131 Ga0400491_05600 3300038727 Bacteria 8459
132 Ga0400485_12698 3300038735 Bacteria 22058
133 Ga0400485_17963 3300038735 Bacteria 81058
134 Ga0400485_18509 3300038735 Bacteria 2406
135 Ga0400488_00638 3300038741 Bacteria 12570
136 Ga0400488_20395 3300038741 Bacteria 1988
137 Ga0400488_46961 3300038741 Bacteria 19550
138 Ga0400488_50412 3300038741 Bacteria 3384
139 Ga0400488_57949 3300038741 Bacteria 8539
140 Ga0400486_01032 3300038742 Bacteria 14189
141 Ga0400486_13259 3300038742 Bacteria 15713
142 Ga0400486_23422 3300038742 Bacteria 16532
143 Ga0400486_25440 3300038742 Bacteria 22090
144 Ga0400483_002122 3300039062 Bacteria 3621
145 Ga0400483_037000 3300039062 Bacteria 2108
146 Ga0400483_053203 3300039062 Bacteria 20082
147 Ga0400483_057715 3300039062 Bacteria 15008
148 Ga0400483_070573 3300039062 Bacteria 13543
149 Ga0400483_133263 3300039062 Bacteria 1699
150 Ga0400483_136116 3300039062 Bacteria 2095
151 Ga0400483_146363 3300039062 Bacteria 8230
152 Ga0400483_174641 3300039062 Bacteria 23227
153 Ga0400483_188248 3300039062 Bacteria 19742
154 Ga0400483_200925 3300039062 Unclassified 2240
155 Ga0400483_207980 3300039062 Bacteria 10087
156 Ga0400483_220809 3300039062 Bacteria 2751
157 Ga0400483_254206 3300039062 Bacteria 1760
158 Ga0400483_286667 3300039062 Bacteria 6803
159 Ga0400483_289687 3300039062 Bacteria 12127
160 Ga0400489_20772 3300039093 Bacteria 7103
161 Ga0400489_33736 3300039093 Bacteria 1690
162 Ga0400487_19915 3300039110 Bacteria 26104
163 Ga0400487_21001 3300039110 Bacteria 10045
164 Ga0400487_23734 3300039110 Bacteria 2857
165 Ga0400487_26765 3300039110 Bacteria 90753
166 Ga0400487_45443 3300039110 Bacteria 2633
167 Ga0400487_51599 3300039110 Bacteria 25965
168 Ga0400487_62766 3300039110 Bacteria 2930
169 Ga0451577_0000196 3300042876 Bacteria 126516
170 Ga0453684_0000040 3300044712 Bacteria 690210
171 Ga0453684_0000821 3300044712 Bacteria 105082
172 Ga0451576_0000160 3300045051 Bacteria 171162
173 Ga0451576_0164745 3300045051 Bacteria 2313
174 Ga0496102_0024356 3300048905 Bacteria 5381
175 Ga0496104_0099375 3300048907 Bacteria 2786
176 Ga0496105_0029835 3300048908 Bacteria 4465
177 Ga0496106_0046201 3300048909 Bacteria 3272
178 Ga0496109_0025826 3300048912 Bacteria 5235
179 Ga0496112_0004429 3300048915 Bacteria 11892
180 Ga0496114_0003093 3300048917 Bacteria 12754
181 Ga0496114_0020363 3300048917 Bacteria 5385
182 Ga0496119_0000560 3300048922 Bacteria 50313
183 Ga0496122_0000624 3300048925 Bacteria 72348
184 Ga0496123_0000569 3300048926 Bacteria 63009
185 Ga0501031_0057005 3300049568 Bacteria 2546
186 Ga0501048_0096349 3300049582 Bacteria 2087
187 Ga0501081_0033893 3300049743 Bacteria 3472
188 Ga0501083_0036104 3300049744 Bacteria 3373
189 nmdc:mga09592_160651_c1 3300050508 Bacteria 1941
190 nmdc:mga0qj67_53302_c1 3300050509 Bacteria 3202
191 nmdc:mga06r32_263616_c1 3300050510 Bacteria 1711
192 nmdc:mga08y16_104867_c1 3300050511 Bacteria 2943
193 nmdc:mga08y16_207776_c1 3300050511 Bacteria 2028
194 Ga0500556_0000364 3300053104 Bacteria 33465
195 Ga0500622_0000001 3300053156 Bacteria 657715
196 2507506462 2507262055 Bacteria 8048963
197 2511392958 2511231027 Bacteria 5013807
198 2523468320 2523231067 Bacteria 5230452
199 2554815948 2554235132 Bacteria 6772433
200 2608382322 2606217733 Bacteria 6360972
201 2739348123 2738543031 Bacteria 5769731
202 2765466120 2765235802 Bacteria 5618596
203 2770195799 2767802442 Bacteria 5747986
204 2776271282 2775506902 Bacteria 6208009
205 2776280720 2775506904 Bacteria 5954060
206 2839995304 2839993093 Bacteria 5512535
207 2840770056 2840764183 Bacteria 6358399
208 2842872484 2842871566 Bacteria 4827117
209 2861694413 2861691609 Bacteria 5628931
210 2876765222 2876761206 Bacteria 10111113
211 2894511891 2894510363 Bacteria 5121143
212 2894654532 2894652903 Bacteria 4587256
213 2894821677 2894817345 Bacteria 4892941
214 2904582649 2904578770 Bacteria 5302906
215 2919124735 2919119836 Bacteria 5208557
216 2928523429 2928521798 Bacteria 4960112
217 2954015700 2954011201 Bacteria 4762601
218 2989395593 2989392574 Bacteria 4554005
219 3002143625 3002141150 Bacteria 5254435
220 3005482548 3005474847 Bacteria 9259049
221 8001526548 8001522603 Bacteria 4726425
222 Ga0209967_1001354
223 Ga0068869_100153231
224 Ga0070666_10017188
225 Ga0068868_100000902
226 Ga0070689_100029374
227 Ga0070671_100000467
228 Ga0070667_100000958
229 Ga0070700_100052152
230 Ga0070694_100063190
231 Ga0070708_100248656
232 Ga0070681_10006932
233 Ga0070707_100025358
234 Ga0070699_100060027
235 Ga0070697_100195698
236 Ga0070665_100041103
237 Ga0070704_100015098
238 Ga0070664_100010818
239 Ga0070702_100009262
240 Ga0068852_100056524
241 Ga0068859_100025096
242 Ga0068864_100017293
243 Ga0068863_100000398
244 Ga0068858_100009411
245 Ga0068860_100035024
246 Ga0097621_100020727
247 Ga0068871_100009883
248 Ga0068871_100040893
249 Ga0075430_100109461
250 Ga0075431_100101027
251 Ga0097620_100025095
252 Ga0099794_10005059
253 Ga0099794_10051176
254 Ga0111539_10050465
255 Ga0111539_10118694
256 Ga0111539_10186255
257 Ga0105245_10001102
258 Ga0105247_10008507
259 Ga0105241_10053987
260 Ga0105242_10025992
261 Ga0105248_10000958
262 Ga0105238_10116356
263 Ga0105239_10083799
264 Ga0163162_10010067
265 Ga0157375_10252861
266 Ga0157375_10306450
267 Ga0163163_10000472
268 Ga0157379_10001694
269 Ga0157376_10011455
270 Ga0214544_1001246
271 Ga0214542_1001948
272 Ga0214545_1000914
273 Ga0214543_1001723
274 Ga0207680_10015028
275 Ga0207684_10145270
276 Ga0207707_10049760
277 Ga0207650_10163174
278 Ga0207644_10013895
279 Ga0207670_10068993
280 Ga0207689_10170536
281 Ga0207658_10067915
282 Ga0207677_10002101
283 Ga0207703_10011054
284 Ga0207708_10002988
285 Ga0207676_10002181
286 Ga0207675_100003212
287 Ga0207683_10000104
288 Ga0209969_1000440
289 Ga0209700_100076
290 Ga0209995_1001006
291 Ga0209974_10007925
292 Ga0207428_10118018
293 Ga0268266_10021591
294 Ga0268265_10007202
295 Ga0268264_10075700
296 Ga0265319_1008159
297 Ga0265319_1013093
298 Ga0265318_10042003
299 Ga0265324_10001409
300 Ga0265330_10005016
301 Ga0265328_10000067
302 Ga0265328_10014957
303 Ga0265320_10007667
304 Ga0265320_10026825
305 Ga0265331_10000012
306 Ga0265331_10011359
307 Ga0265327_10000734
308 Ga0265327_10001179
309 Ga0265327_10001186
310 Ga0265327_10001289
311 Ga0265327_10001441
312 Ga0265327_10001664
313 Ga0265327_10008535
314 Ga0265327_10015742
315 Ga0265316_10001175
316 Ga0316575_10004558
317 Ga0316575_10058167
318 Ga0265314_10000772
319 Ga0265314_10076255
320 Ga0316576_10001699
321 Ga0316576_10007804
322 Ga0316578_10024086
323 Ga0316578_10068895
324 Ga0307516_10126748
325 Ga0316577_10016958
326 Ga0307416_100083787
327 Ga0307411_10092950
328 Ga0316580_10001963
329 Ga0316580_10008823
330 Ga0316593_10000148
331 Ga0316593_10002782
332 Ga0373952_0000932
333 Ga0316574_0008963
334 Ga0373937_0013599
335 Ga0373937_0017664
336 Ga0316582_0002498
337 Ga0316582_0105921
338 Ga0316584_0004212
339 Ga0316584_0014780
340 Ga0316584_0016840
341 Ga0316584_0082892
342 Ga0316581_0030788
343 Ga0400484_07526
344 Ga0400484_10922
345 Ga0400484_37422
346 Ga0400490_09944
347 Ga0400490_27862
348 Ga0400490_29790
349 Ga0400490_33350
350 Ga0400490_33994
351 Ga0400491_00751
352 Ga0400491_05600
353 Ga0400485_12698
354 Ga0400485_17963
355 Ga0400485_18509
356 Ga0400488_00638
357 Ga0400488_20395
358 Ga0400488_46961
359 Ga0400488_50412
360 Ga0400488_57949
361 Ga0400486_01032
362 Ga0400486_13259
363 Ga0400486_23422
364 Ga0400486_25440
365 Ga0400483_002122
366 Ga0400483_037000
367 Ga0400483_053203
368 Ga0400483_057715
369 Ga0400483_070573
370 Ga0400483_133263
371 Ga0400483_136116
372 Ga0400483_146363
373 Ga0400483_174641
374 Ga0400483_188248
375 Ga0400483_200925
376 Ga0400483_207980
377 Ga0400483_220809
378 Ga0400483_254206
379 Ga0400483_286667
380 Ga0400483_289687
381 Ga0400489_20772
382 Ga0400489_33736
383 Ga0400487_19915
384 Ga0400487_21001
385 Ga0400487_23734
386 Ga0400487_26765
387 Ga0400487_45443
388 Ga0400487_51599
389 Ga0400487_62766
390 Ga0451577_0000196
391 Ga0453684_0000040
392 Ga0453684_0000821
393 Ga0451576_0000160
394 Ga0451576_0164745
395 Ga0496102_0024356
396 Ga0496104_0099375
397 Ga0496105_0029835
398 Ga0496106_0046201
399 Ga0496109_0025826
400 Ga0496112_0004429
401 Ga0496114_0003093
402 Ga0496114_0020363
403 Ga0496119_0000560
404 Ga0496122_0000624
405 Ga0496123_0000569
406 Ga0501031_0057005
407 Ga0501048_0096349
408 Ga0501081_0033893
409 Ga0501083_0036104
410 nmdc:mga09592_160651_c1
411 nmdc:mga0qj67_53302_c1
412 nmdc:mga06r32_263616_c1
413 nmdc:mga08y16_104867_c1
414 nmdc:mga08y16_207776_c1
415 Ga0500556_0000364
416 Ga0500622_0000001
417 2507506462
418 2511392958
419 2523468320
420 2554815948
421 2608382322
422 2739348123
423 2765466120
424 2770195799
425 2776271282
426 2776280720
427 2839995304
428 2840770056
429 2842872484
430 2861694413
431 2876765222
432 2894511891
433 2894654532
434 2894821677
435 2904582649
436 2919124735
437 2928523429
438 2954015700
439 2989395593
440 3002143625
441 3005482548
442 8001526548

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00425

Chorismate_bind

chorismate binding enzyme

189

443

0.99

PF04715

Anth_synt_I_N

Anthranilate synthase component I, N terminal region

14

146

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1k0e-assembly2.cif.gz_B the crystal structure of aminodeoxychorismate synthase from formate grown crystals 0.936 3 452
1k0e-assembly1.cif.gz_A the crystal structure of aminodeoxychorismate synthase from formate grown crystals 0.9351 1 452
7qu9-assembly2.cif.gz_B structure of aminodeoxychorismate synthase component 1 (pabb) from bacillus subtilis spizizenii. 0.931 2 455
1k0e-assembly1.cif.gz_A the crystal structure of aminodeoxychorismate synthase from formate grown crystals 0.9309 1 452
1qdl-assembly1.cif.gz_A-2 the crystal structure of anthranilate synthase from sulfolobus solfataricus 0.9244 3 452
ID Description Score Start End Superfamily
1qdlA00 Alpha Beta;4-Layer Sandwich;Anthranilate synthase;Anthranilate synthase 0.9222 3 452 3.60.120.10
1qdlA00 Alpha Beta;4-Layer Sandwich;Anthranilate synthase;Anthranilate synthase 0.9137 3 452 3.60.120.10
1k0gB00 Alpha Beta;4-Layer Sandwich;Anthranilate synthase;Anthranilate synthase 0.9104 1 450 3.60.120.10
af_A0A1D6LA98_50_603_3.60.120.10 Alpha Beta;4-Layer Sandwich;Anthranilate synthase;Anthranilate synthase 0.9017 3 457 3.60.120.10
1k0gB00 Alpha Beta;4-Layer Sandwich;Anthranilate synthase;Anthranilate synthase 0.8998 1 450 3.60.120.10
ID Description Score Start End GO Terms
AF-A0A2N2SGB6-F1-model_v4 aminodeoxychorismate synthase (EC 2.6.1.85) 0.9684 50 455 GO:0000162
GO:0009396
GO:0046820
AF-X7YNQ9-F1-model_v4 Anthranilate synthase component 1 (EC 4.1.3.27) 0.9675 264 367 GO:0000162
GO:0016829
AF-A0A699Q9B5-F1-model_v4 Anthranilate synthase component 0.9656 257 362 GO:0000162
GO:0016829
GO:0046872
AF-D2XTK3-F1-model_v4 Anthranilate synthase component I (EC 4.1.3.27) 0.9652 257 362 GO:0000162
GO:0004049
GO:0046872
AF-A0A855HG66-F1-model_v4 deleted 0.9629 224 344

Map