F331409

General Info

Members Datasets Scaffolds Average Seq Length
219 156 438 324

Family's Representative Sequence

Representative Sequence 3300046454|Ga0495592_0066717|Ga0495592_0066717_609_1694
Length 361
Sequence LREEGARAIVTPAMNQRRALITGITGQDGSYLAELLLEQGYEVFGLVRRSSSANLARIQHILPRLHLVQGDLLDQSSLMRALGESRPQELYNLAAQSFVPTSFDEPVHTAEITGIGVTRLLEALRHVAPEARFYQASTSEMFGHASEMPQRETTPFHPRSPYGVAKAYAHWITVNFRESYGLFATSGILFNHESPRRGTEFVTRKITRAAARIALGLERELVLGNLDARRDWGFAGDYVRAMWSMLQQDEPGDYVIATGVMHSVREVCELAFEEAGLDWQEHVRVDAAFQRPAEVHLLCGDASKARAQLDWQPRMDFETLIRTMVRADLESERGGGSAGLRSAVAAARTGPRPSGTRPPRA

Samples

Sample ID Description Type Environment
1 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
41 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
42 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
43 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
64 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
67 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
70 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
71 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
82 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
83 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
91 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
92 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
93 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
94 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
95 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
96 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
97 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
98 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
99 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
104 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
105 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
106 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
130 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
133 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
139 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
151 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
152 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
153 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
154 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.54
Metatranscriptomes 0.46
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.37
Nodule 0
Rhizoplane 5.48
Rhizosphere 92.69
Stem 0
Stem Tuber 0
Unclassified 0.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495592_0066717 3300046454 Bacteria 2633
2 JGI25406J46586_10028088 3300003203 Bacteria 2147
3 Ga0065715_10136839 3300005293 Bacteria 1916
4 Ga0070683_100002009 3300005329 Bacteria 15975
5 Ga0070683_100002828 3300005329 Bacteria 13892
6 Ga0070680_100070207 3300005336 Bacteria 2877
7 Ga0070682_100006416 3300005337 Bacteria 6608
8 Ga0070689_100202840 3300005340 Bacteria 1620
9 Ga0070688_100149976 3300005365 Bacteria 1593
10 Ga0070659_100122125 3300005366 Bacteria 2111
11 Ga0070714_100019467 3300005435 Bacteria 5531
12 Ga0070705_100183698 3300005440 Bacteria 1419
13 Ga0070681_10018111 3300005458 Bacteria 7043
14 Ga0070681_10152104 3300005458 Bacteria 2240
15 Ga0070679_100101045 3300005530 Bacteria 2870
16 Ga0070684_100004966 3300005535 Bacteria 10153
17 Ga0070684_100022355 3300005535 Bacteria 5274
18 Ga0068853_100044489 3300005539 Bacteria 3801
19 Ga0068855_100073308 3300005563 Bacteria 3978
20 Ga0070664_100057072 3300005564 Bacteria 3318
21 Ga0068857_100003922 3300005577 Bacteria 12523
22 Ga0068857_100486560 3300005577 Bacteria 1157
23 Ga0068854_100067907 3300005578 Bacteria 2598
24 Ga0068856_100116393 3300005614 Bacteria 2674
25 Ga0068852_100170451 3300005616 Bacteria 2040
26 Ga0068860_100489535 3300005843 Bacteria 1227
27 Ga0081539_10000810 3300005985 Bacteria 60756
28 Ga0075428_100006353 3300006844 Bacteria 13151
29 Ga0075428_100018273 3300006844 Bacteria 7750
30 Ga0075428_100021253 3300006844 Bacteria 7186
31 Ga0075430_100073902 3300006846 Bacteria 2858
32 Ga0075431_100010462 3300006847 Bacteria 9329
33 Ga0075431_100087267 3300006847 Bacteria 3220
34 Ga0075433_10085293 3300006852 Bacteria 2788
35 Ga0075429_100150270 3300006880 Bacteria 2039
36 Ga0068865_100150295 3300006881 Bacteria 1766
37 Ga0099794_10117881 3300007265 Bacteria 1334
38 Ga0105240_10000048 3300009093 Bacteria 237451
39 Ga0105240_10165534 3300009093 Bacteria 2623
40 Ga0111539_10415627 3300009094 Bacteria 1567
41 Ga0111539_10483963 3300009094 Bacteria 1441
42 Ga0114129_10400531 3300009147 Bacteria 1809
43 Ga0105248_10064368 3300009177 Bacteria 4117
44 Ga0105237_10020560 3300009545 Bacteria 6802
45 Ga0105249_10221651 3300009553 Bacteria 1861
46 Ga0157370_10025829 3300013104 Bacteria 5810
47 Ga0157369_10027839 3300013105 Bacteria 6261
48 Ga0157369_10058433 3300013105 Bacteria 4160
49 Ga0157369_10287844 3300013105 Bacteria 1711
50 Ga0157369_10591819 3300013105 Bacteria 1145
51 Ga0157372_10623247 3300013307 Bacteria 1257
52 Ga0182006_1006167 3300015261 Bacteria 5604
53 Ga0182007_10015772 3300015262 Bacteria 2806
54 Ga0163161_10391501 3300017792 Bacteria 1113
55 Ga0206353_10064099 3300020082 Bacteria 2228
56 Ga0207707_10051305 3300025912 Bacteria 3592
57 Ga0207707_10057373 3300025912 Bacteria 3389
58 Ga0207695_10002862 3300025913 Bacteria 25087
59 Ga0207671_10080708 3300025914 Bacteria 2439
60 Ga0207663_10139614 3300025916 Bacteria 1686
61 Ga0207657_10095441 3300025919 Bacteria 2474
62 Ga0207652_10012948 3300025921 Bacteria 6747
63 Ga0207652_10152864 3300025921 Bacteria 2067
64 Ga0207652_10182636 3300025921 Bacteria 1885
65 Ga0207646_10325127 3300025922 Bacteria 1390
66 Ga0207664_10008127 3300025929 Bacteria 7300
67 Ga0207690_10133761 3300025932 Bacteria 1818
68 Ga0207686_10049252 3300025934 Bacteria 2614
69 Ga0207661_10008839 3300025944 Bacteria 7209
70 Ga0207661_10019964 3300025944 Bacteria 5002
71 Ga0207640_10142210 3300025981 Bacteria 1751
72 Ga0207639_10100324 3300026041 Bacteria 2338
73 Ga0207702_10081923 3300026078 Bacteria 2804
74 Ga0207674_10000430 3300026116 Bacteria 54816
75 Ga0207674_10089941 3300026116 Bacteria 3062
76 Ga0268265_10336752 3300028380 Bacteria 1372
77 Ga0268264_10350696 3300028381 Bacteria 1405
78 Ga0265336_10000519 3300028666 Bacteria 22252
79 Ga0265338_10000694 3300028800 Bacteria 57889
80 Ga0265338_10001614 3300028800 Bacteria 36056
81 Ga0265330_10004525 3300031235 Bacteria 7049
82 Ga0265332_10000093 3300031238 Bacteria 78229
83 Ga0265328_10005995 3300031239 Bacteria 5176
84 Ga0265329_10007032 3300031242 Bacteria 4393
85 Ga0265331_10000177 3300031250 Bacteria 78211
86 Ga0265316_10000142 3300031344 Bacteria 78246
87 Ga0265314_10000904 3300031711 Bacteria 35127
88 Ga0265342_10042642 3300031712 Bacteria 2740
89 Ga0316583_10032346 3300032133 Bacteria 1860
90 Ga0316574_0043310 3300035398 Bacteria 2781
91 Ga0373935_0116698 3300035692 Bacteria 1778
92 Ga0373947_0007866 3300035725 Bacteria 6156
93 Ga0373937_0000826 3300036401 Bacteria 26539
94 Ga0373925_0044471 3300037068 Bacteria 3297
95 Ga0395900_0031882 3300037418 Bacteria 5417
96 Ga0395900_0144258 3300037418 Bacteria 2436
97 Ga0395898_0060410 3300037466 Bacteria 3683
98 Ga0395898_0167930 3300037466 Bacteria 2098
99 Ga0395905_0097682 3300037471 Bacteria 2758
100 Ga0395905_0171898 3300037471 Bacteria 2035
101 Ga0395901_0050740 3300038443 Bacteria 4309
102 Ga0395901_0118625 3300038443 Bacteria 2780
103 Ga0439441_009983 3300042001 Bacteria 1583
104 Ga0453683_0000024 3300044673 Bacteria 263554
105 Ga0466963_0003249 3300044694 Bacteria 9261
106 Ga0466963_0005403 3300044694 Bacteria 7481
107 Ga0453684_0007350 3300044712 Bacteria 20337
108 Ga0453684_0044240 3300044712 Bacteria 5963
109 Ga0466971_0132874 3300044719 Bacteria 1156
110 Ga0466959_0001352 3300045049 Bacteria 14948
111 Ga0466959_0009448 3300045049 Bacteria 6938
112 Ga0466959_0088816 3300045049 Bacteria 2222
113 Ga0451576_0265910 3300045051 Bacteria 1793
114 Ga0451576_0394870 3300045051 Bacteria 1450
115 Ga0466958_0008573 3300045836 Bacteria 5676
116 Ga0466967_0007409 3300045976 Bacteria 7913
117 Ga0466967_0015524 3300045976 Bacteria 5971
118 Ga0466967_0032390 3300045976 Bacteria 4413
119 Ga0466967_0034528 3300045976 Bacteria 4294
120 Ga0495592_0000075 3300046454 Bacteria 88214
121 Ga0495592_0000364 3300046454 Bacteria 35905
122 Ga0495592_0110782 3300046454 Bacteria 1943
123 Ga0495592_0115032 3300046454 Bacteria 1899
124 Ga0495592_0277443 3300046454 Bacteria 1097
125 Ga0495638_0000451 3300046460 Bacteria 49286
126 Ga0495651_0000212 3300046462 Bacteria 44502
127 Ga0495653_0000694 3300046463 Bacteria 25665
128 Ga0495653_0040829 3300046463 Bacteria 3624
129 Ga0495580_0004284 3300046472 Bacteria 12000
130 Ga0495608_0002399 3300046511 Bacteria 13489
131 Ga0495618_0001888 3300046514 Bacteria 13796
132 Ga0495618_0009214 3300046514 Bacteria 5962
133 Ga0495628_0000303 3300046516 Bacteria 44258
134 Ga0495628_0038517 3300046516 Bacteria 3826
135 Ga0495652_0000111 3300046529 Bacteria 87928
136 Ga0495652_0086269 3300046529 Bacteria 2578
137 Ga0495665_0000518 3300046531 Bacteria 19500
138 Ga0495640_0087215 3300046533 Bacteria 2065
139 Ga0495587_0000222 3300046536 Bacteria 42224
140 Ga0495645_0000046 3300046543 Bacteria 89390
141 Ga0495645_0027384 3300046543 Bacteria 4141
142 Ga0495645_0071230 3300046543 Bacteria 2507
143 Ga0495667_0000749 3300046559 Bacteria 20854
144 Ga0495667_0001333 3300046559 Bacteria 16216
145 Ga0495657_0001458 3300046675 Bacteria 20434
146 Ga0495657_0007221 3300046675 Bacteria 8612
147 Ga0495599_0000309 3300046678 Bacteria 29389
148 Ga0495599_0000442 3300046678 Bacteria 23609
149 Ga0495599_0029403 3300046678 Bacteria 3445
150 Ga0495623_0000037 3300046679 Bacteria 80938
151 Ga0495646_0000055 3300046680 Bacteria 57268
152 Ga0495646_0013998 3300046680 Bacteria 5099
153 Ga0495604_0000080 3300047317 Bacteria 83113
154 Ga0495674_0063418 3300047319 Bacteria 3215
155 Ga0495674_0095590 3300047319 Bacteria 2533
156 Ga0495674_0157997 3300047319 Bacteria 1898
157 Ga0495680_0014874 3300047322 Bacteria 6727
158 Ga0495680_0349176 3300047322 Bacteria 1030
159 Ga0495675_0000060 3300047444 Bacteria 76099
160 Ga0495684_0001103 3300047471 Unclassified 21728
161 Ga0495602_0000075 3300048088 Bacteria 95851
162 Ga0496100_0098974 3300048903 Bacteria 2006
163 Ga0496100_0115955 3300048903 Bacteria 1868
164 Ga0496102_0015800 3300048905 Bacteria 6581
165 Ga0496106_0018252 3300048909 Bacteria 5187
166 Ga0496107_0020372 3300048910 Bacteria 4683
167 Ga0496108_0162959 3300048911 Bacteria 1928
168 Ga0496109_0005510 3300048912 Bacteria 10598
169 Ga0496109_0423763 3300048912 Bacteria 1257
170 Ga0496112_0054322 3300048915 Bacteria 3935
171 Ga0496112_0276421 3300048915 Bacteria 1627
172 Ga0496112_0313764 3300048915 Bacteria 1513
173 Ga0496113_0085926 3300048916 Bacteria 2417
174 Ga0496125_0003223 3300048928 Bacteria 20138
175 Ga0501032_0053872 3300049569 Bacteria 2708
176 Ga0501034_0134191 3300049571 Bacteria 2457
177 Ga0501036_0142160 3300049572 Bacteria 2025
178 Ga0501038_0195432 3300049574 Bacteria 1626
179 Ga0501039_0389015 3300049575 Bacteria 1095
180 Ga0501042_0082068 3300049578 Bacteria 2311
181 Ga0501046_0201758 3300049580 Bacteria 1480
182 Ga0501067_0060930 3300049583 Bacteria 2088
183 Ga0501069_0034304 3300049585 Bacteria 2795
184 Ga0501070_0018438 3300049586 Bacteria 5855
185 Ga0501070_0034298 3300049586 Bacteria 4244
186 Ga0501072_0013806 3300049588 Bacteria 6186
187 Ga0501073_0072066 3300049589 Bacteria 2406
188 Ga0501074_0010133 3300049590 Bacteria 6844
189 Ga0501074_0041806 3300049590 Bacteria 3318
190 Ga0501075_0073039 3300049591 Bacteria 2594
191 Ga0501079_0008462 3300049741 Bacteria 7799
192 Ga0501080_0001169 3300049742 Bacteria 21714
193 Ga0501080_0062430 3300049742 Bacteria 3468
194 Ga0501081_0007475 3300049743 Bacteria 7086
195 Ga0501083_0144265 3300049744 Bacteria 1559
196 Ga0501035_0061924 3300049822 Bacteria 3329
197 Ga0501044_0068911 3300049823 Bacteria 3602
198 Ga0501044_0264908 3300049823 Bacteria 1656
199 Ga0501045_0212181 3300049824 Bacteria 1442
200 nmdc:mga05p37_175047_c1 3300050507 Bacteria 2615
201 nmdc:mga09592_68556_c1 3300050508 Bacteria 3008
202 nmdc:mga0qj67_24493_c1 3300050509 Bacteria 4652
203 nmdc:mga06r32_138426_c1 3300050510 Bacteria 2409
204 nmdc:mga06r32_193883_c1 3300050510 Bacteria 2019
205 nmdc:mga06r32_406989_c1 3300050510 Bacteria 1342
206 nmdc:mga0n895_394845_c1 3300050512 Bacteria 1399
207 nmdc:mga0a205_143981_c1 3300050515 Bacteria 2283
208 Ga0495601_0000040 3300053077 Bacteria 79488
209 Ga0495601_0001206 3300053077 Bacteria 14170
210 Ga0495601_0001685 3300053077 Bacteria 12196
211 Ga0495601_0099561 3300053077 Bacteria 1877
212 Ga0495612_0039407 3300053078 Bacteria 1922
213 Ga0495619_0000469 3300053085 Bacteria 27219
214 Ga0495619_0104934 3300053085 Bacteria 1927
215 Ga0500642_0000025 3300053130 Bacteria 130425
216 Ga0500627_0016543 3300053158 Bacteria 2879
217 Ga0500636_0001105 3300053177 Bacteria 14433
218 Ga0501084_0004672 3300054114 Bacteria 11184
219 Ga0466962_0004530 3300061719 Bacteria 6666
220 Ga0495592_0066717
221 JGI25406J46586_10028088
222 Ga0065715_10136839
223 Ga0070683_100002009
224 Ga0070683_100002828
225 Ga0070680_100070207
226 Ga0070682_100006416
227 Ga0070689_100202840
228 Ga0070688_100149976
229 Ga0070659_100122125
230 Ga0070714_100019467
231 Ga0070705_100183698
232 Ga0070681_10018111
233 Ga0070681_10152104
234 Ga0070679_100101045
235 Ga0070684_100004966
236 Ga0070684_100022355
237 Ga0068853_100044489
238 Ga0068855_100073308
239 Ga0070664_100057072
240 Ga0068857_100003922
241 Ga0068857_100486560
242 Ga0068854_100067907
243 Ga0068856_100116393
244 Ga0068852_100170451
245 Ga0068860_100489535
246 Ga0081539_10000810
247 Ga0075428_100006353
248 Ga0075428_100018273
249 Ga0075428_100021253
250 Ga0075430_100073902
251 Ga0075431_100010462
252 Ga0075431_100087267
253 Ga0075433_10085293
254 Ga0075429_100150270
255 Ga0068865_100150295
256 Ga0099794_10117881
257 Ga0105240_10000048
258 Ga0105240_10165534
259 Ga0111539_10415627
260 Ga0111539_10483963
261 Ga0114129_10400531
262 Ga0105248_10064368
263 Ga0105237_10020560
264 Ga0105249_10221651
265 Ga0157370_10025829
266 Ga0157369_10027839
267 Ga0157369_10058433
268 Ga0157369_10287844
269 Ga0157369_10591819
270 Ga0157372_10623247
271 Ga0182006_1006167
272 Ga0182007_10015772
273 Ga0163161_10391501
274 Ga0206353_10064099
275 Ga0207707_10051305
276 Ga0207707_10057373
277 Ga0207695_10002862
278 Ga0207671_10080708
279 Ga0207663_10139614
280 Ga0207657_10095441
281 Ga0207652_10012948
282 Ga0207652_10152864
283 Ga0207652_10182636
284 Ga0207646_10325127
285 Ga0207664_10008127
286 Ga0207690_10133761
287 Ga0207686_10049252
288 Ga0207661_10008839
289 Ga0207661_10019964
290 Ga0207640_10142210
291 Ga0207639_10100324
292 Ga0207702_10081923
293 Ga0207674_10000430
294 Ga0207674_10089941
295 Ga0268265_10336752
296 Ga0268264_10350696
297 Ga0265336_10000519
298 Ga0265338_10000694
299 Ga0265338_10001614
300 Ga0265330_10004525
301 Ga0265332_10000093
302 Ga0265328_10005995
303 Ga0265329_10007032
304 Ga0265331_10000177
305 Ga0265316_10000142
306 Ga0265314_10000904
307 Ga0265342_10042642
308 Ga0316583_10032346
309 Ga0316574_0043310
310 Ga0373935_0116698
311 Ga0373947_0007866
312 Ga0373937_0000826
313 Ga0373925_0044471
314 Ga0395900_0031882
315 Ga0395900_0144258
316 Ga0395898_0060410
317 Ga0395898_0167930
318 Ga0395905_0097682
319 Ga0395905_0171898
320 Ga0395901_0050740
321 Ga0395901_0118625
322 Ga0439441_009983
323 Ga0453683_0000024
324 Ga0466963_0003249
325 Ga0466963_0005403
326 Ga0453684_0007350
327 Ga0453684_0044240
328 Ga0466971_0132874
329 Ga0466959_0001352
330 Ga0466959_0009448
331 Ga0466959_0088816
332 Ga0451576_0265910
333 Ga0451576_0394870
334 Ga0466958_0008573
335 Ga0466967_0007409
336 Ga0466967_0015524
337 Ga0466967_0032390
338 Ga0466967_0034528
339 Ga0495592_0000075
340 Ga0495592_0000364
341 Ga0495592_0110782
342 Ga0495592_0115032
343 Ga0495592_0277443
344 Ga0495638_0000451
345 Ga0495651_0000212
346 Ga0495653_0000694
347 Ga0495653_0040829
348 Ga0495580_0004284
349 Ga0495608_0002399
350 Ga0495618_0001888
351 Ga0495618_0009214
352 Ga0495628_0000303
353 Ga0495628_0038517
354 Ga0495652_0000111
355 Ga0495652_0086269
356 Ga0495665_0000518
357 Ga0495640_0087215
358 Ga0495587_0000222
359 Ga0495645_0000046
360 Ga0495645_0027384
361 Ga0495645_0071230
362 Ga0495667_0000749
363 Ga0495667_0001333
364 Ga0495657_0001458
365 Ga0495657_0007221
366 Ga0495599_0000309
367 Ga0495599_0000442
368 Ga0495599_0029403
369 Ga0495623_0000037
370 Ga0495646_0000055
371 Ga0495646_0013998
372 Ga0495604_0000080
373 Ga0495674_0063418
374 Ga0495674_0095590
375 Ga0495674_0157997
376 Ga0495680_0014874
377 Ga0495680_0349176
378 Ga0495675_0000060
379 Ga0495684_0001103
380 Ga0495602_0000075
381 Ga0496100_0098974
382 Ga0496100_0115955
383 Ga0496102_0015800
384 Ga0496106_0018252
385 Ga0496107_0020372
386 Ga0496108_0162959
387 Ga0496109_0005510
388 Ga0496109_0423763
389 Ga0496112_0054322
390 Ga0496112_0276421
391 Ga0496112_0313764
392 Ga0496113_0085926
393 Ga0496125_0003223
394 Ga0501032_0053872
395 Ga0501034_0134191
396 Ga0501036_0142160
397 Ga0501038_0195432
398 Ga0501039_0389015
399 Ga0501042_0082068
400 Ga0501046_0201758
401 Ga0501067_0060930
402 Ga0501069_0034304
403 Ga0501070_0018438
404 Ga0501070_0034298
405 Ga0501072_0013806
406 Ga0501073_0072066
407 Ga0501074_0010133
408 Ga0501074_0041806
409 Ga0501075_0073039
410 Ga0501079_0008462
411 Ga0501080_0001169
412 Ga0501080_0062430
413 Ga0501081_0007475
414 Ga0501083_0144265
415 Ga0501035_0061924
416 Ga0501044_0068911
417 Ga0501044_0264908
418 Ga0501045_0212181
419 nmdc:mga05p37_175047_c1
420 nmdc:mga09592_68556_c1
421 nmdc:mga0qj67_24493_c1
422 nmdc:mga06r32_138426_c1
423 nmdc:mga06r32_193883_c1
424 nmdc:mga06r32_406989_c1
425 nmdc:mga0n895_394845_c1
426 nmdc:mga0a205_143981_c1
427 Ga0495601_0000040
428 Ga0495601_0001206
429 Ga0495601_0001685
430 Ga0495601_0099561
431 Ga0495612_0039407
432 Ga0495619_0000469
433 Ga0495619_0104934
434 Ga0500642_0000025
435 Ga0500627_0016543
436 Ga0500636_0001105
437 Ga0501084_0004672
438 Ga0466962_0004530

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

19

257

0.99

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

20

324

0.98

PF05368

NmrA

NmrA-like family

19

87

0.9

PF04321

RmlD_sub_bind

RmlD substrate binding domain

17

217

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1rpn-assembly3.cif.gz_C crystal structure of gdp-d-mannose 4,6-dehydratase in complexes with gdp and nadph 0.984 1 322
1rpn-assembly3.cif.gz_C crystal structure of gdp-d-mannose 4,6-dehydratase in complexes with gdp and nadph 0.978 1 322
1n7h-assembly1.cif.gz_B-2 crystal structure of gdp-mannose 4,6-dehydratase ternary complex with nadph and gdp 0.9614 1 324
1n7g-assembly1.cif.gz_B crystal structure of the gdp-mannose 4,6-dehydratase ternary complex with nadph and gdp-rhamnose. 0.9591 1 324
7kf3-assembly1.cif.gz_B crystal structure of gdp-mannose 4,6-dehydratase from brucella abortus (strain 2308) in complex with guanosine-diphosphate-rhamnose 0.9591 2 324
ID Description Score Start End Superfamily
af_Q4D941_50_182_3.90.25.10 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9588 187 299 3.90.25.10
af_P0AC88_3_270_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9459 2 261 3.40.50.720
1rpnA02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9375 187 322 3.90.25.10
1db3A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.931 1 303 3.40.50.720
af_F1QPT3_45_368_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9288 25 316 3.40.50.720
ID Description Score Start End GO Terms
AF-W9CZ40-F1-model_v4 deleted 0.9899 57 324
AF-Q9Z6I3-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.9896 71 251 GO:0008446
GO:0042351
AF-R7WDJ2-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.9889 159 323 GO:0008446
GO:0042351
AF-A0A497EDG3-F1-model_v4 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.9884 79 320 GO:0008446
GO:0042351
AF-A0A846NYP9-F1-model_v4 deleted 0.9882 146 321

Map