F330281

General Info

Members Datasets Scaffolds Average Seq Length
218 153 216 385

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0124094|Ga0451576_0124094_185_1549
Length 416
Sequence MNPSLASRRELYCVLAAAFIVLVILPCLNAFVPPDSAFYVSTFTLSIYGKYLCYAVLAMGVNLLWGYTGLLSLGQCLFFALGGYCLGMHLMLMIGKLGQYKADIPDFMVFLEFPKRFPETGGLPPHWIPFKSFPFAAIAVMWVPAIVALIFGYLAFRSRIKGVYFSILSQALTYAATLMFFRNDFTFGGNNGLTDFKFILGQEINSPTTKRALFICSGMLLLLVYLFCRWLTTTKFGLIQRAIRDSENRVLFSGYATANFKLFVFVIAGIIAALGGALFVPQVGIINPSEMGTDKSLESVVWVAVGGRQSLIGPILGAVGVNALKSWSTHAFAEQWPYILGALFVFVTLFMPKGIVGVPAQLKSIWARLSHKPLKDEAILQPEGVTQIFHRERQAGKHHDDKSPVPLDSLSPETAS

Samples

Sample ID Description Type Environment
1 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
2 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
3 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
4 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
50 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
74 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
75 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
76 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
77 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
78 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
79 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
82 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
89 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
90 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
96 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
97 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
98 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
99 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
100 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
101 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
102 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
103 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
104 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
105 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
106 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
112 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
113 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
114 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
115 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
116 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
121 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
122 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
138 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
139 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
150 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.08
Metatranscriptomes 0
Isolates 0.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.67
Nodule 0
Rhizoplane 0.46
Rhizosphere 89.91
Stem 0
Stem Tuber 0
Unclassified 5.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24743J22301_10000006 3300001991 Bacteria 22489
2 JGI24033J26618_1000009 3300002155 Bacteria 35651
3 rootH2_10008171 3300003320 Bacteria 22771
4 rootH2_10065794 3300003320 Bacteria 3682
5 rootH2_10106241 3300003320 Bacteria 3285
6 rootL2_10170270 3300003322 Bacteria 3336
7 Ga0055530_10012403 3300003791 Bacteria 2974
8 Ga0065707_10169827 3300005295 Bacteria 1493
9 Ga0070690_100039893 3300005330 Bacteria 2968
10 Ga0068869_100000041 3300005334 Bacteria 52640
11 Ga0070661_100001111 3300005344 Bacteria 18909
12 Ga0070661_100007291 3300005344 Bacteria 7627
13 Ga0070688_100023669 3300005365 Bacteria 3615
14 Ga0070659_100020080 3300005366 Bacteria 5073
15 Ga0070714_100233281 3300005435 Bacteria 1696
16 Ga0070713_100001507 3300005436 Bacteria 14842
17 Ga0068867_100000113 3300005459 Bacteria 51348
18 Ga0070685_10030618 3300005466 Bacteria 3001
19 Ga0068853_100000005 3300005539 Bacteria 366404
20 Ga0070686_100000824 3300005544 Bacteria 17933
21 Ga0070704_100014455 3300005549 Bacteria 4932
22 Ga0068855_100006630 3300005563 Bacteria 14062
23 Ga0068855_100037715 3300005563 Bacteria 5745
24 Ga0068857_100069376 3300005577 Bacteria 3139
25 Ga0068856_100001679 3300005614 Bacteria 23178
26 Ga0068856_100027585 3300005614 Bacteria 5539
27 Ga0068859_100313217 3300005617 Bacteria 1663
28 Ga0068866_10152078 3300005718 Bacteria 1341
29 Ga0075366_10078550 3300006195 Bacteria 1970
30 Ga0097621_100002902 3300006237 Bacteria 11773
31 Ga0068871_100032518 3300006358 Bacteria 4123
32 Ga0075430_100027855 3300006846 Bacteria 4799
33 Ga0075431_100012259 3300006847 Bacteria 8652
34 Ga0075433_10039483 3300006852 Bacteria 4082
35 Ga0075434_100020719 3300006871 Bacteria 6382
36 Ga0068865_100004061 3300006881 Bacteria 8793
37 Ga0075436_100017201 3300006914 Bacteria 4948
38 Ga0097620_100313196 3300006931 Bacteria 1663
39 Ga0075435_100008773 3300007076 Bacteria 7278
40 Ga0105240_10000026 3300009093 Bacteria 355569
41 Ga0105240_10021503 3300009093 Bacteria 8579
42 Ga0105240_10044553 3300009093 Bacteria 5637
43 Ga0111539_10077161 3300009094 Bacteria 3921
44 Ga0114129_10082251 3300009147 Bacteria 4475
45 Ga0105243_10000336 3300009148 Bacteria 51356
46 Ga0105238_10054921 3300009551 Bacteria 4000
47 Ga0105239_10244446 3300010375 Bacteria 2014
48 Ga0157374_10003420 3300013296 Bacteria 13337
49 Ga0157378_10006121 3300013297 Bacteria 10536
50 Ga0157372_10137813 3300013307 Bacteria 2811
51 Ga0157375_10076941 3300013308 Bacteria 3365
52 Ga0157375_10235729 3300013308 Bacteria 1989
53 Ga0157375_10241094 3300013308 Bacteria 1968
54 Ga0157375_10394447 3300013308 Bacteria 1551
55 Ga0157379_10193146 3300014968 Bacteria 1840
56 Ga0157376_10243938 3300014969 Bacteria 1675
57 Ga0213872_10000331 3300021361 Bacteria 40030
58 Ga0213872_10023447 3300021361 Bacteria 2839
59 Ga0213872_10053886 3300021361 Bacteria 1824
60 Ga0213875_10000251 3300021388 Bacteria 54088
61 Ga0213875_10065157 3300021388 Bacteria 1703
62 Ga0209050_1002064 3300025298 Bacteria 18478
63 Ga0207688_10017658 3300025901 Bacteria 3880
64 Ga0207705_10138487 3300025909 Unclassified 1816
65 Ga0207695_10000046 3300025913 Bacteria 430344
66 Ga0207695_10077405 3300025913 Bacteria 3378
67 Ga0207695_10101013 3300025913 Bacteria 2879
68 Ga0207649_10001467 3300025920 Bacteria 13828
69 Ga0207694_10044443 3300025924 Bacteria 3430
70 Ga0207650_10173560 3300025925 Bacteria 1714
71 Ga0207659_10178896 3300025926 Bacteria 1679
72 Ga0207664_10204810 3300025929 Bacteria 1705
73 Ga0207690_10012463 3300025932 Bacteria 5086
74 Ga0207709_10000328 3300025935 Bacteria 51364
75 Ga0207670_10070675 3300025936 Bacteria 2412
76 Ga0207704_10001351 3300025938 Bacteria 10950
77 Ga0207689_10000510 3300025942 Bacteria 36782
78 Ga0207667_10063508 3300025949 Bacteria 3858
79 Ga0207712_10128684 3300025961 Bacteria 1926
80 Ga0207668_10055566 3300025972 Bacteria 2753
81 Ga0207639_10000010 3300026041 Bacteria 415264
82 Ga0207702_10001141 3300026078 Bacteria 27151
83 Ga0207702_10002632 3300026078 Bacteria 16856
84 Ga0207648_10000339 3300026089 Bacteria 51305
85 Ga0207674_10045548 3300026116 Bacteria 4511
86 Ga0207683_10049782 3300026121 Bacteria 3669
87 Ga0265337_1003301 3300028556 Bacteria 7040
88 Ga0265337_1009630 3300028556 Bacteria 3435
89 Ga0265326_10004167 3300028558 Bacteria 4659
90 Ga0265319_1000600 3300028563 Bacteria 24070
91 Ga0265319_1002083 3300028563 Bacteria 11223
92 Ga0265334_10032207 3300028573 Bacteria 2092
93 Ga0265323_10001252 3300028653 Bacteria 12763
94 Ga0265323_10008999 3300028653 Bacteria 4098
95 Ga0265336_10000504 3300028666 Bacteria 22829
96 Ga0307515_10208658 3300028794 Bacteria 1805
97 Ga0265338_10004002 3300028800 Bacteria 20251
98 Ga0265338_10007314 3300028800 Bacteria 13772
99 Ga0265338_10026389 3300028800 Bacteria 5861
100 Ga0265324_10000316 3300029957 Bacteria 35472
101 Ga0265330_10007600 3300031235 Bacteria 5270
102 Ga0265320_10000071 3300031240 Bacteria 89794
103 Ga0265320_10000176 3300031240 Bacteria 54264
104 Ga0265320_10001277 3300031240 Bacteria 18392
105 Ga0265320_10010443 3300031240 Bacteria 5533
106 Ga0265320_10012342 3300031240 Bacteria 4980
107 Ga0265316_10017436 3300031344 Bacteria 6208
108 Ga0265316_10088594 3300031344 Bacteria 2363
109 Ga0307408_100000062 3300031548 Bacteria 127855
110 Ga0307408_100002970 3300031548 Bacteria 11744
111 Ga0307408_100080513 3300031548 Bacteria 2433
112 Ga0265313_10000397 3300031595 Bacteria 46777
113 Ga0265342_10087029 3300031712 Bacteria 1796
114 Ga0307410_10000023 3300031852 Bacteria 60803
115 Ga0307406_10000303 3300031901 Bacteria 28869
116 Ga0307407_10005083 3300031903 Bacteria 5668
117 Ga0307412_10000020 3300031911 Bacteria 258377
118 Ga0307409_100000099 3300031995 Bacteria 31445
119 Ga0307409_100001394 3300031995 Bacteria 11805
120 Ga0307416_100000012 3300032002 Bacteria 296814
121 Ga0307414_10000052 3300032004 Bacteria 126684
122 Ga0373928_0000029 3300035084 Bacteria 23958
123 Ga0373929_0000398 3300035085 Bacteria 8172
124 Ga0373940_0022770 3300035088 Bacteria 1612
125 Ga0373944_0000080 3300035089 Bacteria 16528
126 Ga0373949_0000869 3300035090 Bacteria 9533
127 Ga0373951_0002635 3300035091 Bacteria 4501
128 Ga0373932_0000001 3300035112 Bacteria 1459067
129 Ga0373945_0023539 3300035116 Bacteria 2128
130 Ga0373943_0077016 3300035170 Bacteria 1702
131 Ga0373962_0000102 3300035242 Bacteria 18707
132 Ga0373931_0000002 3300035691 Bacteria 599830
133 Ga0373927_0021187 3300035695 Bacteria 4259
134 Ga0373925_0000215 3300037068 Bacteria 62800
135 Ga0395905_0000096 3300037471 Bacteria 146075
136 Ga0395905_0337359 3300037471 Bacteria 1398
137 Ga0436364_1562251 3300037853 Bacteria 140891
138 Ga0395901_0056052 3300038443 Bacteria 4100
139 Ga0436365_0159337 3300039437 Bacteria 90161
140 Ga0436365_0554498 3300039437 Bacteria 8603
141 Ga0436365_1502658 3300039437 Bacteria 35855
142 Ga0436360_0858645 3300039438 Bacteria 3190
143 Ga0436360_0940471 3300039438 Bacteria 1880
144 Ga0436360_1359121 3300039438 Bacteria 3074
145 Ga0436361_0004760 3300039447 Bacteria 6000
146 Ga0436361_0064197 3300039447 Bacteria 7358
147 Ga0436361_0066419 3300039447 Bacteria 4277
148 Ga0436361_0462503 3300039447 Bacteria 2401
149 Ga0436361_0760534 3300039447 Bacteria 2138
150 Ga0436361_0782573 3300039447 Bacteria 3989
151 Ga0436361_0923127 3300039447 Bacteria 2848
152 Ga0436362_0860364 3300039453 Bacteria 1974
153 Ga0450888_003107 3300042126 Bacteria 1667
154 Ga0450890_000063 3300042127 Bacteria 19543
155 Ga0451577_0003019 3300042876 Bacteria 19162
156 Ga0451577_0055136 3300042876 Bacteria 3547
157 Ga0453684_0000019 3300044712 Bacteria 908702
158 Ga0453684_0005778 3300044712 Bacteria 24142
159 Ga0451576_0001627 3300045051 Bacteria 37650
160 Ga0451576_0124094 3300045051 Bacteria 2690
161 Ga0495643_0000950 3300046522 Bacteria 29967
162 Ga0495658_0018350 3300046683 Bacteria 3636
163 Ga0496125_0245086 3300048928 Bacteria 1135
164 Ga0501031_0000053 3300049568 Bacteria 62966
165 Ga0501031_0002662 3300049568 Bacteria 11366
166 Ga0501032_0000034 3300049569 Bacteria 119560
167 Ga0501032_0001929 3300049569 Bacteria 16331
168 Ga0501032_0075105 3300049569 Bacteria 2251
169 Ga0501033_0000003 3300049570 Bacteria 586973
170 Ga0501033_0000083 3300049570 Bacteria 89452
171 Ga0501033_0006348 3300049570 Bacteria 9265
172 Ga0501034_0021965 3300049571 Bacteria 6502
173 Ga0501036_0009479 3300049572 Bacteria 8009
174 Ga0501036_0024363 3300049572 Bacteria 5100
175 Ga0501037_0018575 3300049573 Bacteria 5124
176 Ga0501037_0018834 3300049573 Bacteria 5086
177 Ga0501037_0152226 3300049573 Bacteria 1653
178 Ga0501038_0000625 3300049574 Bacteria 31448
179 Ga0501038_0009194 3300049574 Bacteria 9065
180 Ga0501038_0065472 3300049574 Bacteria 3096
181 Ga0501038_0158024 3300049574 Bacteria 1844
182 Ga0501039_0008365 3300049575 Bacteria 7884
183 Ga0501039_0033698 3300049575 Bacteria 3950
184 Ga0501042_0013109 3300049578 Bacteria 5638
185 Ga0501043_0000195 3300049579 Bacteria 55394
186 Ga0501043_0002845 3300049579 Bacteria 14459
187 Ga0501043_0023374 3300049579 Bacteria 4847
188 Ga0501046_0119072 3300049580 Bacteria 2010
189 Ga0501047_0002826 3300049581 Bacteria 16478
190 Ga0501047_0009974 3300049581 Bacteria 8977
191 Ga0501047_0089509 3300049581 Bacteria 2955
192 Ga0501048_0011996 3300049582 Bacteria 6457
193 Ga0501070_0011042 3300049586 Bacteria 7626
194 Ga0501070_0172145 3300049586 Bacteria 1783
195 Ga0501223_016314 3300049663 Bacteria 1467
196 Ga0501227_002044 3300049665 Bacteria 4477
197 Ga0501243_000134 3300049675 Bacteria 8318
198 Ga0501080_0031358 3300049742 Bacteria 4953
199 Ga0501035_0000001 3300049822 Bacteria 1037138
200 Ga0501035_0008499 3300049822 Bacteria 9561
201 Ga0501044_0002448 3300049823 Bacteria 21164
202 Ga0501044_0025826 3300049823 Bacteria 6226
203 Ga0501044_0042469 3300049823 Bacteria 4728
204 Ga0501045_0044784 3300049824 Bacteria 3223
205 nmdc:mga05p37_22909_c1 3300050507 Bacteria 7576
206 nmdc:mga0qj67_47238_c1 3300050509 Bacteria 3400
207 nmdc:mga06r32_11710_c1 3300050510 Bacteria 7894
208 nmdc:mga06r32_74344_c1 3300050510 Bacteria 3295
209 nmdc:mga08y16_302273_c1 3300050511 Bacteria 1649
210 nmdc:mga0n895_31912_c1 3300050512 Bacteria 5050
211 nmdc:mga0a205_14414_c1 3300050515 Bacteria 7374
212 Ga0500556_0001979 3300053104 Bacteria 7231
213 Ga0500568_0004006 3300053139 Bacteria 7991
214 Ga0500616_0001622 3300053153 Bacteria 20912
215 Ga0500616_0006677 3300053153 Bacteria 7498
216 Ga0500622_0039905 3300053156 Bacteria 2447

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050511 nmdc:mga08y16_302273_c1 nmdc:mga08y16_302273_c1_559_1629 324
2 3300037471 Ga0395905_0337359 Ga0395905_0337359_29_1120 338
3 3300050509 nmdc:mga0qj67_47238_c1 nmdc:mga0qj67_47238_c1_2272_3378 339
4 3300049675 Ga0501243_000134 Ga0501243_000134_1241_2338 340
5 3300005334 Ga0068869_100000041 Ga0068869_10000004124 343
6 3300006237 Ga0097621_100002902 Ga0097621_1000029022 343
7 3300006358 Ga0068871_100032518 Ga0068871_1000325182 343
8 3300006881 Ga0068865_100004061 Ga0068865_1000040616 343
9 3300025938 Ga0207704_10001351 Ga0207704_100013519 343
10 3300025942 Ga0207689_10000510 Ga0207689_1000051039 343
11 3300037471 Ga0395905_0000096 Ga0395905_0000096_22787_23926 344
12 3300048928 Ga0496125_0245086 Ga0496125_0245086_25_1122 345
13 3300005539 Ga0068853_100000005 Ga0068853_10000000516 346
14 3300021388 Ga0213875_10000251 Ga0213875_1000025124 346
15 3300026041 Ga0207639_10000010 Ga0207639_10000010278 346
16 3300037853 Ga0436364_1562251 Ga0436364_1562251_25448_26683 346
17 3300044712 Ga0453684_0005778 Ga0453684_0005778_7642_8769 347
18 3300028653 Ga0265323_10008999 Ga0265323_100089993 348
19 3300038443 Ga0395901_0056052 Ga0395901_0056052_2384_3574 348
20 3300053139 Ga0500568_0004006 Ga0500568_0004006_4584_5753 348
21 3300053153 Ga0500616_0006677 Ga0500616_0006677_3084_4250 348
22 3300042127 Ga0450890_000063 Ga0450890_000063_2389_3519 349
23 3300005577 Ga0068857_100069376 Ga0068857_1000693762 350
24 3300005614 Ga0068856_100027585 Ga0068856_1000275853 350
25 3300013308 Ga0157375_10394447 Ga0157375_103944472 350
26 3300026078 Ga0207702_10001141 Ga0207702_1000114111 350
27 3300026116 Ga0207674_10045548 Ga0207674_100455484 350
28 3300031240 Ga0265320_10000176 Ga0265320_1000017626 350
29 3300045051 Ga0451576_0001627 Ga0451576_0001627_12689_13771 350
30 iso_pu_bacteria 2786546517 2787437939 350
31 3300005617 Ga0068859_100313217 Ga0068859_1003132172 351
32 3300006931 Ga0097620_100313196 Ga0097620_1003131962 351
33 3300053156 Ga0500622_0039905 Ga0500622_0039905_1293_2420 351
34 3300003322 rootL2_10170270 rootL2_101702702 353
35 3300009093 Ga0105240_10000026 Ga0105240_10000026209 353
36 3300025913 Ga0207695_10000046 Ga0207695_10000046268 353
37 3300025913 Ga0207695_10101013 Ga0207695_101010134 353
38 3300028653 Ga0265323_10001252 Ga0265323_1000125214 353
39 3300005344 Ga0070661_100007291 Ga0070661_1000072914 354
40 3300005459 Ga0068867_100000113 Ga0068867_10000011343 354
41 3300005718 Ga0068866_10152078 Ga0068866_101520782 354
42 3300009148 Ga0105243_10000336 Ga0105243_1000033644 354
43 3300010375 Ga0105239_10244446 Ga0105239_102444462 354
44 3300013307 Ga0157372_10137813 Ga0157372_101378132 354
45 3300013308 Ga0157375_10235729 Ga0157375_102357292 354
46 3300025925 Ga0207650_10173560 Ga0207650_101735602 354
47 3300025926 Ga0207659_10178896 Ga0207659_101788962 354
48 3300025935 Ga0207709_10000328 Ga0207709_1000032845 354
49 3300026089 Ga0207648_10000339 Ga0207648_1000033910 354
50 3300031344 Ga0265316_10017436 Ga0265316_100174366 354
51 3300031344 Ga0265316_10088594 Ga0265316_100885942 354
52 3300031548 Ga0307408_100002970 Ga0307408_10000297011 354
53 3300031548 Ga0307408_100080513 Ga0307408_1000805132 354
54 3300031712 Ga0265342_10087029 Ga0265342_100870291 354
55 3300031901 Ga0307406_10000303 Ga0307406_1000030310 354
56 3300031911 Ga0307412_10000020 Ga0307412_1000002041 354
57 3300031995 Ga0307409_100001394 Ga0307409_1000013943 354
58 3300032004 Ga0307414_10000052 Ga0307414_1000005232 354
59 3300042126 Ga0450888_003107 Ga0450888_003107_106_1230 354
60 3300044712 Ga0453684_0000019 Ga0453684_0000019_762005_763168 354
61 3300049569 Ga0501032_0075105 Ga0501032_0075105_640_1764 354
62 3300049573 Ga0501037_0152226 Ga0501037_0152226_457_1599 354
63 3300049663 Ga0501223_016314 Ga0501223_016314_50_1183 354
64 3300049665 Ga0501227_002044 Ga0501227_002044_1077_2210 354
65 3300049823 Ga0501044_0002448 Ga0501044_0002448_2855_3997 354
66 3300028794 Ga0307515_10208658 Ga0307515_102086581 355
67 3300031852 Ga0307410_10000023 Ga0307410_1000002328 355
68 3300031903 Ga0307407_10005083 Ga0307407_100050834 355
69 3300031995 Ga0307409_100000099 Ga0307409_10000009915 355
70 3300035088 Ga0373940_0022770 Ga0373940_0022770_135_1346 355
71 3300042876 Ga0451577_0055136 Ga0451577_0055136_359_1486 355
72 3300046683 Ga0495658_0018350 Ga0495658_0018350_510_1721 355
73 3300003791 Ga0055530_10012403 Ga0055530_100124032 356
74 3300006195 Ga0075366_10078550 Ga0075366_100785502 356
75 3300006852 Ga0075433_10039483 Ga0075433_100394832 356
76 3300006871 Ga0075434_100020719 Ga0075434_1000207192 356
77 3300006914 Ga0075436_100017201 Ga0075436_1000172016 356
78 3300007076 Ga0075435_100008773 Ga0075435_1000087733 356
79 3300009093 Ga0105240_10044553 Ga0105240_100445532 356
80 3300009147 Ga0114129_10082251 Ga0114129_100822513 356
81 3300013308 Ga0157375_10241094 Ga0157375_102410942 356
82 3300025298 Ga0209050_1002064 Ga0209050_100206410 356
83 3300028556 Ga0265337_1003301 Ga0265337_10033012 356
84 3300028563 Ga0265319_1002083 Ga0265319_10020833 356
85 3300031240 Ga0265320_10000071 Ga0265320_1000007115 356
86 3300031548 Ga0307408_100000062 Ga0307408_10000006223 356
87 3300031595 Ga0265313_10000397 Ga0265313_1000039715 356
88 3300032002 Ga0307416_100000012 Ga0307416_100000012178 356
89 3300039437 Ga0436365_1502658 Ga0436365_1502658_26134_27264 356
90 3300042876 Ga0451577_0003019 Ga0451577_0003019_4374_5537 356
91 3300046522 Ga0495643_0000950 Ga0495643_0000950_11170_12306 356
92 3300050507 nmdc:mga05p37_22909_c1 nmdc:mga05p37_22909_c1_5232_6392 356
93 3300050512 nmdc:mga0n895_31912_c1 nmdc:mga0n895_31912_c1_2251_3411 356
94 3300050515 nmdc:mga0a205_14414_c1 nmdc:mga0a205_14414_c1_4457_5617 356
95 3300053153 Ga0500616_0001622 Ga0500616_0001622_9152_10327 356
96 3300021361 Ga0213872_10053886 Ga0213872_100538861 357
97 3300025909 Ga0207705_10138487 Ga0207705_101384872 357
98 3300039447 Ga0436361_0923127 Ga0436361_0923127_1592_2761 357
99 3300006846 Ga0075430_100027855 Ga0075430_1000278552 358
100 3300009094 Ga0111539_10077161 Ga0111539_100771612 358
101 3300028556 Ga0265337_1009630 Ga0265337_10096302 358
102 3300031240 Ga0265320_10001277 Ga0265320_1000127713 358
103 3300050510 nmdc:mga06r32_74344_c1 nmdc:mga06r32_74344_c1_2070_3233 358
104 iso_pu_bacteria 2786546548 2787507410 358
105 3300005295 Ga0065707_10169827 Ga0065707_101698271 359
106 3300005330 Ga0070690_100039893 Ga0070690_1000398932 359
107 3300005544 Ga0070686_100000824 Ga0070686_10000082413 359
108 3300005549 Ga0070704_100014455 Ga0070704_1000144556 359
109 3300005563 Ga0068855_100006630 Ga0068855_1000066306 359
110 3300005563 Ga0068855_100037715 Ga0068855_1000377152 359
111 3300005614 Ga0068856_100001679 Ga0068856_10000167917 359
112 3300009093 Ga0105240_10021503 Ga0105240_100215032 359
113 3300009551 Ga0105238_10054921 Ga0105238_100549214 359
114 3300025913 Ga0207695_10077405 Ga0207695_100774053 359
115 3300025924 Ga0207694_10044443 Ga0207694_100444434 359
116 3300025936 Ga0207670_10070675 Ga0207670_100706752 359
117 3300025949 Ga0207667_10063508 Ga0207667_100635082 359
118 3300026078 Ga0207702_10002632 Ga0207702_1000263213 359
119 3300028563 Ga0265319_1000600 Ga0265319_10006009 359
120 3300028800 Ga0265338_10007314 Ga0265338_1000731410 359
121 3300028800 Ga0265338_10026389 Ga0265338_100263894 359
122 3300029957 Ga0265324_10000316 Ga0265324_100003162 359
123 3300031240 Ga0265320_10012342 Ga0265320_100123422 359
124 3300035084 Ga0373928_0000029 Ga0373928_0000029_3053_4207 359
125 3300035085 Ga0373929_0000398 Ga0373929_0000398_5136_6290 359
126 3300035089 Ga0373944_0000080 Ga0373944_0000080_15134_16288 359
127 3300035090 Ga0373949_0000869 Ga0373949_0000869_3897_5051 359
128 3300035091 Ga0373951_0002635 Ga0373951_0002635_3250_4404 359
129 3300035112 Ga0373932_0000001 Ga0373932_0000001_1284611_1285765 359
130 3300035116 Ga0373945_0023539 Ga0373945_0023539_775_1929 359
131 3300035170 Ga0373943_0077016 Ga0373943_0077016_367_1524 359
132 3300035242 Ga0373962_0000102 Ga0373962_0000102_12674_13828 359
133 3300035691 Ga0373931_0000002 Ga0373931_0000002_209633_210787 359
134 3300035695 Ga0373927_0021187 Ga0373927_0021187_1155_2312 359
135 3300037068 Ga0373925_0000215 Ga0373925_0000215_1801_2955 359
136 3300039437 Ga0436365_0554498 Ga0436365_0554498_4479_5690 359
137 3300045051 Ga0451576_0124094 Ga0451576_0124094_185_1549 359
138 3300049574 Ga0501038_0158024 Ga0501038_0158024_602_1756 359
139 3300049579 Ga0501043_0002845 Ga0501043_0002845_13224_14378 359
140 3300049581 Ga0501047_0089509 Ga0501047_0089509_188_1342 359
141 3300003320 rootH2_10065794 rootH2_100657943 360
142 3300003320 rootH2_10106241 rootH2_101062413 360
143 3300006847 Ga0075431_100012259 Ga0075431_1000122592 360
144 3300014968 Ga0157379_10193146 Ga0157379_101931462 360
145 3300014969 Ga0157376_10243938 Ga0157376_102439382 360
146 3300028558 Ga0265326_10004167 Ga0265326_100041675 360
147 3300028573 Ga0265334_10032207 Ga0265334_100322072 360
148 3300028666 Ga0265336_10000504 Ga0265336_1000050412 360
149 3300028800 Ga0265338_10004002 Ga0265338_100040024 360
150 3300031240 Ga0265320_10010443 Ga0265320_100104434 360
151 3300049568 Ga0501031_0002662 Ga0501031_0002662_6986_8227 360
152 3300049569 Ga0501032_0001929 Ga0501032_0001929_11055_12296 360
153 3300049570 Ga0501033_0006348 Ga0501033_0006348_2331_3572 360
154 3300049571 Ga0501034_0021965 Ga0501034_0021965_1350_2591 360
155 3300049572 Ga0501036_0024363 Ga0501036_0024363_2574_3815 360
156 3300049573 Ga0501037_0018834 Ga0501037_0018834_1750_2991 360
157 3300049574 Ga0501038_0009194 Ga0501038_0009194_2858_4099 360
158 3300049575 Ga0501039_0008365 Ga0501039_0008365_5447_6688 360
159 3300049578 Ga0501042_0013109 Ga0501042_0013109_2569_3810 360
160 3300049579 Ga0501043_0023374 Ga0501043_0023374_2830_4071 360
161 3300049580 Ga0501046_0119072 Ga0501046_0119072_684_1925 360
162 3300049581 Ga0501047_0009974 Ga0501047_0009974_6981_8222 360
163 3300049582 Ga0501048_0011996 Ga0501048_0011996_2958_4199 360
164 3300049742 Ga0501080_0031358 Ga0501080_0031358_967_2208 360
165 3300049822 Ga0501035_0008499 Ga0501035_0008499_5743_6984 360
166 3300049823 Ga0501044_0042469 Ga0501044_0042469_921_2162 360
167 3300049824 Ga0501045_0044784 Ga0501045_0044784_1253_2494 360
168 3300050510 nmdc:mga06r32_11710_c1 nmdc:mga06r32_11710_c1_5845_7041 360
169 3300005435 Ga0070714_100233281 Ga0070714_1002332812 361
170 3300005436 Ga0070713_100001507 Ga0070713_10000150713 361
171 3300021388 Ga0213875_10065157 Ga0213875_100651572 361
172 3300025929 Ga0207664_10204810 Ga0207664_102048102 361
173 3300025972 Ga0207668_10055566 Ga0207668_100555662 361
174 3300039437 Ga0436365_0159337 Ga0436365_0159337_34159_35352 361
175 3300039438 Ga0436360_1359121 Ga0436360_1359121_35_1228 361
176 3300039447 Ga0436361_0782573 Ga0436361_0782573_819_2012 361
177 3300039453 Ga0436362_0860364 Ga0436362_0860364_92_1285 361
178 3300049573 Ga0501037_0018575 Ga0501037_0018575_1951_3102 361
179 3300049823 Ga0501044_0025826 Ga0501044_0025826_1787_2938 361
180 3300001991 JGI24743J22301_10000006 JGI24743J22301_100000064 362
181 3300002155 JGI24033J26618_1000009 JGI24033J26618_100000926 362
182 3300003320 rootH2_10008171 rootH2_1000817118 362
183 3300005344 Ga0070661_100001111 Ga0070661_10000111115 362
184 3300005365 Ga0070688_100023669 Ga0070688_1000236691 362
185 3300005366 Ga0070659_100020080 Ga0070659_1000200802 362
186 3300005466 Ga0070685_10030618 Ga0070685_100306183 362
187 3300013296 Ga0157374_10003420 Ga0157374_1000342016 362
188 3300013297 Ga0157378_10006121 Ga0157378_100061213 362
189 3300013308 Ga0157375_10076941 Ga0157375_100769412 362
190 3300021361 Ga0213872_10000331 Ga0213872_1000033145 362
191 3300021361 Ga0213872_10023447 Ga0213872_100234472 362
192 3300025901 Ga0207688_10017658 Ga0207688_100176582 362
193 3300025920 Ga0207649_10001467 Ga0207649_100014672 362
194 3300025932 Ga0207690_10012463 Ga0207690_100124637 362
195 3300025961 Ga0207712_10128684 Ga0207712_101286842 362
196 3300026121 Ga0207683_10049782 Ga0207683_100497823 362
197 3300031235 Ga0265330_10007600 Ga0265330_100076003 362
198 3300039438 Ga0436360_0858645 Ga0436360_0858645_99_1295 362
199 3300039438 Ga0436360_0940471 Ga0436360_0940471_160_1347 362
200 3300039447 Ga0436361_0004760 Ga0436361_0004760_2800_3987 362
201 3300039447 Ga0436361_0064197 Ga0436361_0064197_4753_5940 362
202 3300039447 Ga0436361_0066419 Ga0436361_0066419_2812_3999 362
203 3300039447 Ga0436361_0462503 Ga0436361_0462503_1109_2299 362
204 3300039447 Ga0436361_0760534 Ga0436361_0760534_938_2125 362
205 3300049568 Ga0501031_0000053 Ga0501031_0000053_53505_54659 362
206 3300049569 Ga0501032_0000034 Ga0501032_0000034_79758_80906 362
207 3300049570 Ga0501033_0000003 Ga0501033_0000003_301966_303114 362
208 3300049570 Ga0501033_0000083 Ga0501033_0000083_88233_89384 362
209 3300049572 Ga0501036_0009479 Ga0501036_0009479_5386_6540 362
210 3300049574 Ga0501038_0000625 Ga0501038_0000625_27656_28801 362
211 3300049574 Ga0501038_0065472 Ga0501038_0065472_1309_2463 362
212 3300049575 Ga0501039_0033698 Ga0501039_0033698_98_1252 362
213 3300049579 Ga0501043_0000195 Ga0501043_0000195_13273_14427 362
214 3300049581 Ga0501047_0002826 Ga0501047_0002826_14521_15675 362
215 3300049586 Ga0501070_0011042 Ga0501070_0011042_3907_5061 362
216 3300049586 Ga0501070_0172145 Ga0501070_0172145_503_1642 362
217 3300049822 Ga0501035_0000001 Ga0501035_0000001_451661_452815 362
218 3300053104 Ga0500556_0001979 Ga0500556_0001979_4735_5883 362

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

43

349

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.4275 45 345
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.4204 45 345
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.4029 42 352
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.3871 42 352
7lb8-assembly1.cif.gz_B structure of a ferrichrome importer fhucdb from e. coli 0.3803 11 351
ID Description Score Start End Superfamily
af_Q58666_4_320_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.774 44 342 1.10.3470.10
af_P32720_52_318_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7729 45 339 1.10.3470.10
af_P32720_52_318_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7597 45 339 1.10.3470.10
af_P0AFS1_34_305_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.7518 44 339 1.10.3470.10
af_P0AFS1_34_305_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.742 44 339 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A536UCB9-F1-model_v4 Urea ABC transporter permease subunit UrtC 0.9838 51 353 GO:0005886
GO:0015658
AF-A0A2A2Q1Z8-F1-model_v4 Urea ABC transporter permease subunit UrtC 0.9827 7 354 GO:0005886
GO:0015658
AF-A0A3B8SWW3-F1-model_v4 Urea ABC transporter permease subunit UrtC 0.9816 39 353 GO:0005886
GO:0015658
AF-A0A2S0VY26-F1-model_v4 Urea ABC transporter permease subunit UrtC 0.9811 25 354 GO:0005886
GO:0015658
AF-A0A381WRZ7-F1-model_v4 Urea ABC transporter permease subunit UrtC 0.981 22 354 GO:0005886
GO:0015658

Feature Viewer

pLDDT pTM Quality
88.78 0.9 High
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Predicted Structure (AlphaFold2)

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