F324287

General Info

Members Datasets Scaffolds Average Seq Length
213 163 197 216

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0104503|Ga0436365_0104503_19_783
Length 243
Sequence MYTREQGRAGSAKIAARAIIRQFQSFAAMVRRTKEEALATRHRILDAAERVFERCGVSRTSLNDIAEAAEVTRGAVYWHFKDKADLFNAMMERATMPFEEAACSDERRPDENPIDFMCRRLVEALRTTASHERTRRVFEIATHKVEYVDELLQVRDRHLAGRNECLNECERELKAAMRQGLIASKVPARCIALGLHALVDGLIQNWMLDPEAFDLVKVGKQVLATYVDGLRPPTPSDELRGAA

Samples

Sample ID Description Type Environment
1 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
2 2547132181 Kosakonia sacchari SP1 Isolate Stem
3 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
4 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
5 2561511199 Enterobacter sp. R4-368 Isolate Nodule
6 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
7 2791355010 Kosakonia pseudosacchari NN143 Isolate Unclassified
8 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
9 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
10 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
11 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
12 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
13 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
14 2891670763 Buttiauxella sp. B2 Isolate Rhizosphere
15 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
16 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
17 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
18 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
19 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
20 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
21 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
22 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
23 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
24 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
25 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
26 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
34 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
35 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
36 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
48 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
49 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
56 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
57 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
58 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
61 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
62 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
64 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
77 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
83 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
84 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
85 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
90 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
93 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
94 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
101 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
102 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
103 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
104 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
108 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
109 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
112 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
113 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
114 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
115 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
116 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
117 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
124 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
125 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
126 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
127 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
128 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
131 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
134 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
137 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
138 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
139 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
140 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
144 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
145 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
152 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
156 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
157 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
158 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
159 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
160 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
161 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
162 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
163 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.49
Metatranscriptomes 0
Isolates 7.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.33
Nodule 3.29
Rhizoplane 1.41
Rhizosphere 61.03
Stem 0.47
Stem Tuber 0
Unclassified 23.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000008 3300002704 Bacteria 236146
2 JGI25155J39150_1000601 3300002704 Bacteria 7686
3 JGI25155J39150_1000608 3300002704 Bacteria 7569
4 JGI25156J39149_1000002 3300002705 Bacteria 343501
5 JGI25156J39149_1000098 3300002705 Bacteria 64288
6 JGI25162J39368_1000032 3300002737 Bacteria 195871
7 JGI25154J39366_1000010 3300002738 Bacteria 297985
8 JGI25154J39366_1000519 3300002738 Bacteria 19394
9 JGI25154J39366_1002742 3300002738 Bacteria 4270
10 JGI25157J39369_1000001 3300002741 Bacteria 363277
11 JGI25157J39369_1000102 3300002741 Bacteria 72343
12 JGI25150J39212_1010334 3300002774 Bacteria 1738
13 Ga0055532_1000034 3300003758 Bacteria 210984
14 Ga0055535_1008896 3300003761 Bacteria 1770
15 Ga0058692_1002438 3300003856 Bacteria 6228
16 Ga0065165_1040346 3300005262 Bacteria 1393
17 Ga0068868_100637496 3300005338 Bacteria 948
18 Ga0070674_100583683 3300005356 Bacteria 942
19 Ga0070667_100927624 3300005367 Bacteria 811
20 Ga0070708_100146308 3300005445 Bacteria 2195
21 Ga0070708_100175351 3300005445 Bacteria 2003
22 Ga0070678_100610129 3300005456 Unclassified 975
23 Ga0070662_100005514 3300005457 Bacteria 8088
24 Ga0070685_10464976 3300005466 Bacteria 889
25 Ga0070706_100002743 3300005467 Bacteria 17610
26 Ga0070698_100192786 3300005471 Bacteria 1975
27 Ga0070697_100031482 3300005536 Bacteria 4268
28 Ga0070665_100511800 3300005548 Bacteria 1212
29 Ga0070704_100058019 3300005549 Bacteria 2756
30 Ga0068855_100076660 3300005563 Bacteria 3879
31 Ga0068856_100183798 3300005614 Bacteria 2104
32 Ga0075365_10433454 3300006038 Bacteria 928
33 Ga0075363_100030365 3300006048 Bacteria 2798
34 Ga0075366_10174763 3300006195 Bacteria 1304
35 Ga0097621_100203697 3300006237 Bacteria 1719
36 Ga0097621_100299464 3300006237 Bacteria 1420
37 Ga0075370_10059707 3300006353 Bacteria 2171
38 Ga0075430_100373531 3300006846 Bacteria 1177
39 Ga0079104_1000111 3300006946 Bacteria 116796
40 Ga0079104_1000220 3300006946 Bacteria 79382
41 Ga0079104_1000248 3300006946 Bacteria 72191
42 Ga0105244_10000087 3300009036 Bacteria 102130
43 Ga0105244_10005872 3300009036 Bacteria 8059
44 Ga0105244_10041130 3300009036 Bacteria 2396
45 Ga0105250_10001627 3300009092 Bacteria 12009
46 Ga0114129_10049009 3300009147 Bacteria 5937
47 Ga0114129_10175284 3300009147 Bacteria 2921
48 Ga0157374_10662154 3300013296 Bacteria 1056
49 Ga0163162_10830337 3300013306 Bacteria 1040
50 Ga0157372_10026573 3300013307 Bacteria 6300
51 Ga0157375_10485025 3300013308 Bacteria 1401
52 Ga0182006_1011702 3300015261 Bacteria 3854
53 Ga0183362_10007 3300015683 Bacteria 240101
54 Ga0209435_100001 3300025206 Bacteria 1424171
55 Ga0209435_100007 3300025206 Bacteria 516857
56 Ga0209435_101706 3300025206 Bacteria 2676
57 Ga0209147_100017 3300025229 Bacteria 516857
58 Ga0209258_100115 3300025242 Bacteria 190367
59 Ga0209646_1000001 3300025246 Bacteria 3092932
60 Ga0209646_1000044 3300025246 Bacteria 334596
61 Ga0209646_1000238 3300025246 Bacteria 57384
62 Ga0209026_1000001 3300025250 Bacteria 1228671
63 Ga0209026_1000063 3300025250 Bacteria 211324
64 Ga0209026_1002620 3300025250 Bacteria 6570
65 Ga0209148_1013614 3300025254 Bacteria 1459
66 Ga0209759_1000001 3300025256 Bacteria 2799452
67 Ga0209759_1000048 3300025256 Bacteria 224817
68 Ga0209759_1000991 3300025256 Bacteria 19486
69 Ga0207696_1000517 3300025711 Bacteria 32018
70 Ga0207655_1000042 3300025728 Bacteria 333039
71 Ga0207655_1004467 3300025728 Bacteria 9912
72 Ga0207655_1036087 3300025728 Bacteria 2197
73 Ga0207655_1043845 3300025728 Bacteria 1886
74 Ga0207713_1015625 3300025735 Bacteria 3887
75 Ga0207705_10260969 3300025909 Bacteria 1323
76 Ga0207684_10009121 3300025910 Bacteria 8787
77 Ga0207646_10592324 3300025922 Bacteria 995
78 Ga0207706_10001816 3300025933 Bacteria 20959
79 Ga0207691_10120030 3300025940 Bacteria 2331
80 Ga0207667_10017243 3300025949 Bacteria 8135
81 Ga0207677_10233567 3300026023 Bacteria 1483
82 Ga0207708_10570188 3300026075 Bacteria 956
83 Ga0207702_10088990 3300026078 Bacteria 2699
84 Ga0209281_1000041 3300027111 Bacteria 347825
85 Ga0209281_1000079 3300027111 Bacteria 261444
86 Ga0209969_1000533 3300027360 Bacteria 5156
87 Ga0209984_1028073 3300027424 Bacteria 790
88 Ga0209999_1012479 3300027543 Bacteria 1539
89 Ga0209971_1021097 3300027682 Bacteria 1549
90 Ga0209974_10001613 3300027876 Bacteria 8155
91 Ga0307517_10007370 3300028786 Bacteria 16050
92 Ga0307515_10000664 3300028794 Bacteria 79458
93 Ga0307515_10079596 3300028794 Bacteria 4290
94 Ga0268256_1006204 3300030500 Bacteria 4494
95 Ga0307512_10012825 3300030522 Bacteria 7886
96 Ga0307513_10000012 3300031456 Bacteria 328865
97 Ga0307513_10012376 3300031456 Bacteria 10540
98 Ga0307509_10000139 3300031507 Bacteria 108589
99 Ga0307509_10100506 3300031507 Bacteria 2930
100 Ga0307408_100036050 3300031548 Bacteria 3474
101 Ga0307508_10002534 3300031616 Bacteria 19233
102 Ga0307508_10004507 3300031616 Bacteria 13584
103 Ga0307514_10164771 3300031649 Bacteria 1460
104 Ga0307516_10009570 3300031730 Bacteria 10791
105 Ga0307516_10195221 3300031730 Bacteria 1747
106 Ga0307405_10000296 3300031731 Bacteria 18440
107 Ga0307413_10000809 3300031824 Bacteria 10917
108 Ga0307410_10028609 3300031852 Bacteria 3538
109 Ga0307412_10006759 3300031911 Bacteria 6502
110 Ga0307412_10092643 3300031911 Bacteria 2118
111 Ga0307409_100000156 3300031995 Bacteria 26070
112 Ga0307416_100720852 3300032002 Bacteria 1088
113 Ga0307414_10011221 3300032004 Bacteria 5245
114 Ga0307411_10000411 3300032005 Bacteria 14658
115 Ga0307415_100032438 3300032126 Bacteria 3377
116 Ga0307507_10089225 3300033179 Bacteria 2654
117 Ga0307510_10051076 3300033180 Bacteria 4377
118 Ga0307510_10056614 3300033180 Bacteria 4079
119 Ga0373955_0289151 3300035172 Bacteria 987
120 Ga0373927_0004210 3300035695 Bacteria 10106
121 Ga0395901_0048893 3300038443 Bacteria 4392
122 Ga0395901_0214017 3300038443 Bacteria 2016
123 Ga0436365_0104503 3300039437 Bacteria 884
124 Ga0439461_0017002 3300041410 Bacteria 1410
125 Ga0439431_0003887 3300041997 Bacteria 3296
126 Ga0439434_0054689 3300042435 Bacteria 1242
127 Ga0451577_0000186 3300042876 Bacteria 131630
128 Ga0451577_0187321 3300042876 Bacteria 1866
129 Ga0451577_0660280 3300042876 Bacteria 948
130 Ga0466969_0000009 3300044656 Bacteria 125464
131 Ga0466969_0117585 3300044656 Bacteria 1239
132 Ga0466972_0002502 3300044658 Bacteria 9088
133 Ga0466965_0049307 3300044683 Bacteria 2087
134 Ga0466965_0058582 3300044683 Bacteria 1921
135 Ga0466965_0078595 3300044683 Bacteria 1666
136 Ga0466965_0168437 3300044683 Bacteria 1151
137 Ga0466966_0048742 3300044684 Bacteria 2698
138 Ga0466966_0058815 3300044684 Bacteria 2428
139 Ga0466961_0007975 3300044693 Bacteria 6748
140 Ga0466961_0010391 3300044693 Bacteria 5940
141 Ga0466961_0038443 3300044693 Bacteria 3069
142 Ga0466963_0059558 3300044694 Bacteria 2548
143 Ga0466964_0010737 3300044706 Bacteria 3458
144 Ga0466964_0046865 3300044706 Bacteria 1763
145 Ga0453684_0000121 3300044712 Bacteria 341067
146 Ga0466957_0154654 3300044842 Bacteria 1485
147 Ga0466959_0000428 3300045049 Bacteria 24501
148 Ga0466959_0023754 3300045049 Bacteria 4538
149 Ga0451576_0025951 3300045051 Bacteria 6307
150 Ga0451576_0450655 3300045051 Unclassified 1351
151 Ga0451576_0614167 3300045051 Bacteria 1143
152 Ga0451576_0886277 3300045051 Bacteria 936
153 Ga0466958_0058056 3300045836 Bacteria 2352
154 Ga0466967_0110162 3300045976 Bacteria 2529
155 Ga0466967_0296214 3300045976 Bacteria 1555
156 Ga0495592_0159446 3300046454 Bacteria 1554
157 Ga0495651_0009020 3300046462 Bacteria 7658
158 Ga0495650_0009688 3300046471 Bacteria 5459
159 Ga0495608_0296987 3300046511 Bacteria 1000
160 Ga0495620_0041730 3300046515 Bacteria 2010
161 Ga0495628_0018148 3300046516 Bacteria 5834
162 Ga0495637_0167792 3300046520 Bacteria 820
163 Ga0495648_0116038 3300046524 Bacteria 1447
164 Ga0495652_0049298 3300046529 Bacteria 3606
165 Ga0495654_0007530 3300046530 Bacteria 6073
166 Ga0495654_0009022 3300046530 Bacteria 5474
167 Ga0495597_0000377 3300046542 Bacteria 38986
168 Ga0495625_0003463 3300046660 Bacteria 15715
169 Ga0495625_0006375 3300046660 Bacteria 10525
170 Ga0495588_0025170 3300046674 Bacteria 2963
171 Ga0495672_0000027 3300047320 Bacteria 325651
172 Ga0495679_000019 3300047446 Bacteria 231072
173 Ga0495673_0200077 3300047469 Bacteria 748
174 Ga0495602_0087792 3300048088 Bacteria 2591
175 Ga0496101_0241095 3300048904 Bacteria 1407
176 Ga0496115_0341047 3300048918 Bacteria 1223
177 Ga0496121_0007747 3300048924 Bacteria 12872
178 Ga0496122_0017908 3300048925 Bacteria 6578
179 Ga0496123_0000801 3300048926 Bacteria 50851
180 Ga0496124_0000288 3300048927 Bacteria 95203
181 Ga0496125_0013054 3300048928 Bacteria 8193
182 Ga0501034_0018520 3300049571 Bacteria 7138
183 Ga0501069_0491327 3300049585 Bacteria 732
184 Ga0501035_0506505 3300049822 Bacteria 993
185 nmdc:mga06z11_517411_c1 3300050494 Bacteria 723
186 nmdc:mga07m45_205900_c1 3300050496 Bacteria 1144
187 nmdc:mga05p37_328270_c1 3300050507 Bacteria 1808
188 nmdc:mga0n895_94432_c1 3300050512 Bacteria 2994
189 Ga0500644_0002338 3300053088 Bacteria 4766
190 Ga0500641_0027159 3300053096 Bacteria 2228
191 Ga0500594_0001357 3300053118 Bacteria 5310
192 Ga0500559_0000089 3300053136 Bacteria 72681
193 Ga0500590_055769 3300053148 Bacteria 1998
194 Ga0500619_027427 3300053154 Bacteria 1706
195 Ga0500622_0009619 3300053156 Bacteria 5341
196 Ga0500636_0056955 3300053177 Bacteria 2288
197 Ga0466962_0093841 3300061719 Bacteria 1438

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049585 Ga0501069_0491327 Ga0501069_0491327_19_612 161
2 3300045051 Ga0451576_0025951 Ga0451576_0025951_4124_4741 169
3 3300013296 Ga0157374_10662154 Ga0157374_106621543 173
4 3300032004 Ga0307414_10011221 Ga0307414_100112213 175
5 3300031548 Ga0307408_100036050 Ga0307408_1000360503 176
6 3300031731 Ga0307405_10000296 Ga0307405_100002968 176
7 3300031824 Ga0307413_10000809 Ga0307413_100008093 176
8 3300031852 Ga0307410_10028609 Ga0307410_100286092 176
9 3300031911 Ga0307412_10006759 Ga0307412_100067593 176
10 3300031995 Ga0307409_100000156 Ga0307409_10000015623 176
11 3300032005 Ga0307411_10000411 Ga0307411_100004113 176
12 3300032126 Ga0307415_100032438 Ga0307415_1000324382 176
13 3300005338 Ga0068868_100637496 Ga0068868_1006374961 177
14 3300005548 Ga0070665_100511800 Ga0070665_1005118001 177
15 3300006237 Ga0097621_100299464 Ga0097621_1002994641 177
16 3300013308 Ga0157375_10485025 Ga0157375_104850252 177
17 3300026023 Ga0207677_10233567 Ga0207677_102335672 177
18 3300042876 Ga0451577_0000186 Ga0451577_0000186_92390_93022 177
19 3300044712 Ga0453684_0000121 Ga0453684_0000121_163499_164131 177
20 3300045051 Ga0451576_0886277 Ga0451576_0886277_176_790 177
21 3300005367 Ga0070667_100927624 Ga0070667_1009276241 178
22 3300025909 Ga0207705_10260969 Ga0207705_102609692 178
23 3300031456 Ga0307513_10012376 Ga0307513_100123766 178
24 3300038443 Ga0395901_0048893 Ga0395901_0048893_2324_2959 178
25 3300038443 Ga0395901_0214017 Ga0395901_0214017_875_1516 178
26 3300045976 Ga0466967_0110162 Ga0466967_0110162_53_670 178
27 3300006846 Ga0075430_100373531 Ga0075430_1003735311 179
28 3300031911 Ga0307412_10092643 Ga0307412_100926432 179
29 3300032002 Ga0307416_100720852 Ga0307416_1007208522 179
30 3300039437 Ga0436365_0104503 Ga0436365_0104503_19_783 179
31 3300041410 Ga0439461_0017002 Ga0439461_0017002_512_1147 179
32 3300041997 Ga0439431_0003887 Ga0439431_0003887_278_913 179
33 3300042435 Ga0439434_0054689 Ga0439434_0054689_529_1164 179
34 3300042876 Ga0451577_0187321 Ga0451577_0187321_123_743 179
35 iso_pu_bacteria 2548876994 2550694862 179
36 iso_pu_bacteria 2818991445 2819593954 179
37 iso_pu_bacteria 2884811622 2884811629 179
38 iso_pu_bacteria 2884836552 2884839775 179
39 iso_pu_bacteria 2884852848 2884856414 179
40 3300006353 Ga0075370_10059707 Ga0075370_100597072 180
41 3300046454 Ga0495592_0159446 Ga0495592_0159446_802_1425 180
42 3300046471 Ga0495650_0009688 Ga0495650_0009688_1684_2307 180
43 3300050496 nmdc:mga07m45_205900_c1 nmdc:mga07m45_205900_c1_181_834 180
44 3300053148 Ga0500590_055769 Ga0500590_055769_394_1017 180
45 3300006048 Ga0075363_100030365 Ga0075363_1000303653 181
46 3300006195 Ga0075366_10174763 Ga0075366_101747632 181
47 3300030522 Ga0307512_10012825 Ga0307512_100128253 181
48 3300031507 Ga0307509_10000139 Ga0307509_10000139101 181
49 3300031649 Ga0307514_10164771 Ga0307514_101647711 181
50 3300033180 Ga0307510_10051076 Ga0307510_100510763 181
51 3300033180 Ga0307510_10056614 Ga0307510_100566143 181
52 3300046515 Ga0495620_0041730 Ga0495620_0041730_197_850 181
53 3300046524 Ga0495648_0116038 Ga0495648_0116038_765_1394 181
54 3300050494 nmdc:mga06z11_517411_c1 nmdc:mga06z11_517411_c1_38_664 181
55 3300053088 Ga0500644_0002338 Ga0500644_0002338_276_929 181
56 3300053118 Ga0500594_0001357 Ga0500594_0001357_821_1474 181
57 3300053136 Ga0500559_0000089 Ga0500559_0000089_71765_72418 181
58 3300053154 Ga0500619_027427 Ga0500619_027427_31_684 181
59 3300053156 Ga0500622_0009619 Ga0500622_0009619_4474_5127 181
60 3300053177 Ga0500636_0056955 Ga0500636_0056955_1415_2068 181
61 iso_pu_bacteria 2891670763 2891674927 181
62 3300015683 Ga0183362_10007 Ga0183362_10007170 182
63 3300025922 Ga0207646_10592324 Ga0207646_105923241 182
64 3300028786 Ga0307517_10007370 Ga0307517_100073708 182
65 3300028794 Ga0307515_10079596 Ga0307515_100795963 182
66 3300031730 Ga0307516_10009570 Ga0307516_100095707 182
67 iso_pu_bacteria 2547132181 2547698781 182
68 iso_pu_bacteria 2881101125 2881105331 182
69 3300002704 JGI25155J39150_1000601 JGI25155J39150_10006014 183
70 3300002704 JGI25155J39150_1000608 JGI25155J39150_10006083 183
71 3300002705 JGI25156J39149_1000098 JGI25156J39149_100009831 183
72 3300002738 JGI25154J39366_1000519 JGI25154J39366_10005194 183
73 3300002738 JGI25154J39366_1002742 JGI25154J39366_10027423 183
74 3300002741 JGI25157J39369_1000102 JGI25157J39369_100010253 183
75 3300003758 Ga0055532_1000034 Ga0055532_1000034126 183
76 3300003761 Ga0055535_1008896 Ga0055535_10088963 183
77 3300005445 Ga0070708_100146308 Ga0070708_1001463082 183
78 3300005563 Ga0068855_100076660 Ga0068855_1000766601 183
79 3300005614 Ga0068856_100183798 Ga0068856_1001837982 183
80 3300025206 Ga0209435_100007 Ga0209435_100007126 183
81 3300025206 Ga0209435_101706 Ga0209435_1017062 183
82 3300025229 Ga0209147_100017 Ga0209147_100017346 183
83 3300025242 Ga0209258_100115 Ga0209258_100115115 183
84 3300025246 Ga0209646_1000044 Ga0209646_1000044187 183
85 3300025246 Ga0209646_1000238 Ga0209646_10002383 183
86 3300025250 Ga0209026_1000063 Ga0209026_1000063126 183
87 3300025250 Ga0209026_1002620 Ga0209026_10026206 183
88 3300025254 Ga0209148_1013614 Ga0209148_10136142 183
89 3300025256 Ga0209759_1000048 Ga0209759_1000048126 183
90 3300025256 Ga0209759_1000991 Ga0209759_100099116 183
91 3300025949 Ga0207667_10017243 Ga0207667_100172435 183
92 3300026078 Ga0207702_10088990 Ga0207702_100889902 183
93 3300031616 Ga0307508_10004507 Ga0307508_100045079 183
94 3300044656 Ga0466969_0000009 Ga0466969_0000009_122732_123436 183
95 3300044684 Ga0466966_0048742 Ga0466966_0048742_1058_1705 183
96 3300044693 Ga0466961_0010391 Ga0466961_0010391_3377_4024 183
97 3300045049 Ga0466959_0023754 Ga0466959_0023754_824_1471 183
98 3300046660 Ga0495625_0003463 Ga0495625_0003463_12166_12798 183
99 3300047469 Ga0495673_0200077 Ga0495673_0200077_23_700 183
100 3300048924 Ga0496121_0007747 Ga0496121_0007747_9388_10020 183
101 3300048928 Ga0496125_0013054 Ga0496125_0013054_2742_3374 183
102 iso_pu_bacteria 2511231003 2511251585 183
103 iso_pu_bacteria 2551306416 2553008138 183
104 iso_pu_bacteria 2885192300 2885197639 183
105 iso_pu_bacteria 2923510766 2923515091 183
106 3300031730 Ga0307516_10195221 Ga0307516_101952212 184
107 3300046462 Ga0495651_0009020 Ga0495651_0009020_2729_3364 184
108 3300046511 Ga0495608_0296987 Ga0495608_0296987_97_732 184
109 3300046516 Ga0495628_0018148 Ga0495628_0018148_2491_3126 184
110 3300046529 Ga0495652_0049298 Ga0495652_0049298_130_765 184
111 3300048088 Ga0495602_0087792 Ga0495602_0087792_867_1502 184
112 3300006038 Ga0075365_10433454 Ga0075365_104334541 185
113 3300006946 Ga0079104_1000111 Ga0079104_100011179 185
114 3300013306 Ga0163162_10830337 Ga0163162_108303371 185
115 3300027111 Ga0209281_1000079 Ga0209281_100007979 185
116 3300031507 Ga0307509_10100506 Ga0307509_101005063 185
117 3300031616 Ga0307508_10002534 Ga0307508_1000253410 185
118 3300033179 Ga0307507_10089225 Ga0307507_100892253 185
119 3300044683 Ga0466965_0168437 Ga0466965_0168437_42_680 185
120 3300048904 Ga0496101_0241095 Ga0496101_0241095_330_968 185
121 3300053096 Ga0500641_0027159 Ga0500641_0027159_249_929 185
122 iso_pu_bacteria 2602042109 2603866288 185
123 iso_pu_bacteria 3000376612 3000380144 185
124 3300009036 Ga0105244_10041130 Ga0105244_100411302 186
125 3300009092 Ga0105250_10001627 Ga0105250_100016273 186
126 3300025711 Ga0207696_1000517 Ga0207696_100051719 186
127 3300025728 Ga0207655_1036087 Ga0207655_10360872 186
128 3300025728 Ga0207655_1043845 Ga0207655_10438452 186
129 3300025735 Ga0207713_1015625 Ga0207713_10156252 186
130 3300046520 Ga0495637_0167792 Ga0495637_0167792_101_742 186
131 3300046530 Ga0495654_0007530 Ga0495654_0007530_1450_2091 186
132 3300046530 Ga0495654_0009022 Ga0495654_0009022_470_1111 186
133 3300046542 Ga0495597_0000377 Ga0495597_0000377_30628_31269 186
134 3300046660 Ga0495625_0006375 Ga0495625_0006375_5701_6342 186
135 3300046674 Ga0495588_0025170 Ga0495588_0025170_1659_2300 186
136 3300047320 Ga0495672_0000027 Ga0495672_0000027_156769_157410 186
137 3300047446 Ga0495679_000019 Ga0495679_000019_75068_75709 186
138 iso_pu_bacteria 2561511199 2562466308 186
139 iso_pu_bacteria 2791355010 2792313731 186
140 3300002737 JGI25162J39368_1000032 JGI25162J39368_1000032139 187
141 3300009036 Ga0105244_10000087 Ga0105244_1000008746 187
142 3300025728 Ga0207655_1000042 Ga0207655_10000424 187
143 3300028794 Ga0307515_10000664 Ga0307515_1000066471 187
144 3300042876 Ga0451577_0660280 Ga0451577_0660280_283_927 187
145 3300048927 Ga0496124_0000288 Ga0496124_0000288_42812_43456 187
146 3300049571 Ga0501034_0018520 Ga0501034_0018520_4653_5327 187
147 3300005467 Ga0070706_100002743 Ga0070706_1000027438 188
148 3300005471 Ga0070698_100192786 Ga0070698_1001927862 188
149 3300005536 Ga0070697_100031482 Ga0070697_1000314823 188
150 3300005549 Ga0070704_100058019 Ga0070704_1000580192 188
151 3300025910 Ga0207684_10009121 Ga0207684_100091218 188
152 3300026075 Ga0207708_10570188 Ga0207708_105701881 188
153 3300045051 Ga0451576_0614167 Ga0451576_0614167_235_882 188
154 3300049822 Ga0501035_0506505 Ga0501035_0506505_52_780 188
155 3300009147 Ga0114129_10049009 Ga0114129_100490094 189
156 3300015261 Ga0182006_1011702 Ga0182006_10117022 189
157 3300031456 Ga0307513_10000012 Ga0307513_1000001269 189
158 3300035172 Ga0373955_0289151 Ga0373955_0289151_152_829 189
159 3300035695 Ga0373927_0004210 Ga0373927_0004210_7152_7829 189
160 3300044656 Ga0466969_0117585 Ga0466969_0117585_448_1173 189
161 3300044658 Ga0466972_0002502 Ga0466972_0002502_1022_1729 189
162 3300044683 Ga0466965_0058582 Ga0466965_0058582_42_749 189
163 3300044684 Ga0466966_0058815 Ga0466966_0058815_657_1382 189
164 3300044693 Ga0466961_0038443 Ga0466961_0038443_1292_2017 189
165 3300044694 Ga0466963_0059558 Ga0466963_0059558_751_1476 189
166 3300044706 Ga0466964_0010737 Ga0466964_0010737_2657_3382 189
167 3300044842 Ga0466957_0154654 Ga0466957_0154654_204_929 189
168 3300045049 Ga0466959_0000428 Ga0466959_0000428_14714_15439 189
169 3300045836 Ga0466958_0058056 Ga0466958_0058056_326_1051 189
170 3300045976 Ga0466967_0296214 Ga0466967_0296214_764_1489 189
171 3300050507 nmdc:mga05p37_328270_c1 nmdc:mga05p37_328270_c1_947_1624 189
172 3300050512 nmdc:mga0n895_94432_c1 nmdc:mga0n895_94432_c1_275_952 189
173 3300061719 Ga0466962_0093841 Ga0466962_0093841_283_1008 189
174 3300003856 Ga0058692_1002438 Ga0058692_10024386 190
175 3300005356 Ga0070674_100583683 Ga0070674_1005836831 190
176 3300005457 Ga0070662_100005514 Ga0070662_1000055143 190
177 3300005466 Ga0070685_10464976 Ga0070685_104649761 190
178 3300006237 Ga0097621_100203697 Ga0097621_1002036972 190
179 3300006946 Ga0079104_1000248 Ga0079104_100024840 190
180 3300009036 Ga0105244_10005872 Ga0105244_100058724 190
181 3300009147 Ga0114129_10175284 Ga0114129_101752844 190
182 3300013307 Ga0157372_10026573 Ga0157372_100265732 190
183 3300025728 Ga0207655_1004467 Ga0207655_10044672 190
184 3300025933 Ga0207706_10001816 Ga0207706_100018163 190
185 3300027111 Ga0209281_1000041 Ga0209281_100004151 190
186 3300030500 Ga0268256_1006204 Ga0268256_10062042 190
187 3300048918 Ga0496115_0341047 Ga0496115_0341047_482_1135 190
188 3300048925 Ga0496122_0017908 Ga0496122_0017908_3285_3938 190
189 3300048926 Ga0496123_0000801 Ga0496123_0000801_16902_17555 190
190 3300005456 Ga0070678_100610129 Ga0070678_1006101291 191
191 3300006946 Ga0079104_1000220 Ga0079104_100022031 191
192 3300025940 Ga0207691_10120030 Ga0207691_101200302 191
193 3300044683 Ga0466965_0049307 Ga0466965_0049307_315_995 191
194 3300005445 Ga0070708_100175351 Ga0070708_1001753512 192
195 3300027360 Ga0209969_1000533 Ga0209969_10005333 193
196 3300027424 Ga0209984_1028073 Ga0209984_10280732 193
197 3300027543 Ga0209999_1012479 Ga0209999_10124792 193
198 3300027682 Ga0209971_1021097 Ga0209971_10210972 193
199 3300027876 Ga0209974_10001613 Ga0209974_100016132 193
200 3300044683 Ga0466965_0078595 Ga0466965_0078595_70_756 193
201 3300044693 Ga0466961_0007975 Ga0466961_0007975_1093_1779 193
202 3300044706 Ga0466964_0046865 Ga0466964_0046865_854_1540 193
203 3300045051 Ga0451576_0450655 Ga0451576_0450655_552_1256 194
204 3300002704 JGI25155J39150_1000008 JGI25155J39150_1000008124 200
205 3300002705 JGI25156J39149_1000002 JGI25156J39149_1000002131 200
206 3300002738 JGI25154J39366_1000010 JGI25154J39366_1000010186 200
207 3300002741 JGI25157J39369_1000001 JGI25157J39369_1000001152 200
208 3300002774 JGI25150J39212_1010334 JGI25150J39212_10103344 200
209 3300005262 Ga0065165_1040346 Ga0065165_10403461 200
210 3300025206 Ga0209435_100001 Ga0209435_1000011166 200
211 3300025246 Ga0209646_1000001 Ga0209646_10000011535 200
212 3300025250 Ga0209026_1000001 Ga0209026_1000001187 200
213 3300025256 Ga0209759_1000001 Ga0209759_10000011166 200

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

44

90

0.99

PF08361

TetR_C_2

MAATS-type transcriptional repressor, C-terminal region

112

232

0.95

PF13977

TetR_C_6

BetI-type transcriptional repressor, C-terminal

119

232

0.89

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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