F317667

General Info

Members Datasets Scaffolds Average Seq Length
208 164 416 259

Family's Representative Sequence

Representative Sequence 3300006852|Ga0075433_10273718|Ga0075433_102737182
Length 282
Sequence MMATTEPRTLAIRRVNWTALRYYRRCMKAVILAGGLGTRLMEETELRPKPMVEIGGRPLLWHILKHYAHFGLREFVIALGYRGELIKRYFADAAGLDGSVSVHTRARRVERHDEAAEDWIVRLIETGLDTMTGGRLKRLAPHVSDGTFMMTYGDGVADVDLHALLAFHREHGCLATITAVRPPARFGALEIEGDHVVRFSEKPQVGEGWINGGFFVLEPRVLDYIEGDQTLWERQPLERLAKEGQVVAFRHESFWQGMDTLRDRRYLESIWAAGKAPWKVWE

Samples

Sample ID Description Type Environment
1 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
55 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
58 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
59 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
81 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
82 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
85 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
88 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
93 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
98 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
99 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
100 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
101 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
102 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
111 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
128 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
139 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
140 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
141 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
142 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
143 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
151 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
153 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
157 2508501050 Microvirga lupini Lut6 Isolate Nodule
158 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
159 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
160 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
161 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
162 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
163 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
164 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.79
Metatranscriptomes 3.37
Isolates 3.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.29
Nodule 0.48
Rhizoplane 10.58
Rhizosphere 77.88
Stem 0
Stem Tuber 0
Unclassified 7.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075433_10273718 3300006852 Bacteria 1496
2 JGI25406J46586_10027157 3300003203 Bacteria 2199
3 Ga0058863_11721162 3300004799 Bacteria 2322
4 Ga0058862_12870763 3300004803 Bacteria 1494
5 Ga0070690_100058494 3300005330 Bacteria 2475
6 Ga0070666_10572056 3300005335 Bacteria 823
7 Ga0070673_100715858 3300005364 Bacteria 920
8 Ga0070688_100350769 3300005365 Bacteria 1080
9 Ga0070713_100125445 3300005436 Bacteria 2257
10 Ga0070705_100024044 3300005440 Bacteria 3282
11 Ga0070694_100000643 3300005444 Bacteria 19269
12 Ga0070694_100244362 3300005444 Bacteria 1355
13 Ga0070694_100489288 3300005444 Bacteria 977
14 Ga0070708_100025267 3300005445 Bacteria 5076
15 Ga0070708_100037007 3300005445 Bacteria 4256
16 Ga0070708_100251479 3300005445 Bacteria 1660
17 Ga0070708_100356155 3300005445 Bacteria 1379
18 Ga0070662_100354404 3300005457 Bacteria 1203
19 Ga0068867_100308764 3300005459 Unclassified 1306
20 Ga0068867_100316637 3300005459 Bacteria 1291
21 Ga0068867_100489859 3300005459 Unclassified 1055
22 Ga0070685_10057661 3300005466 Bacteria 2261
23 Ga0070706_100043393 3300005467 Bacteria 4155
24 Ga0070706_100362316 3300005467 Bacteria 1351
25 Ga0070707_100000316 3300005468 Bacteria 47399
26 Ga0070707_100018447 3300005468 Bacteria 6564
27 Ga0070707_100087891 3300005468 Unclassified 3006
28 Ga0070698_100004521 3300005471 Bacteria 15289
29 Ga0070698_100007549 3300005471 Bacteria 11759
30 Ga0070698_100017372 3300005471 Bacteria 7581
31 Ga0070698_100169532 3300005471 Bacteria 2124
32 Ga0070699_100009886 3300005518 Bacteria 8261
33 Ga0070699_100033350 3300005518 Bacteria 4448
34 Ga0070679_100774826 3300005530 Bacteria 902
35 Ga0070697_100000820 3300005536 Bacteria 23284
36 Ga0070697_100193520 3300005536 Unclassified 1727
37 Ga0070697_100410219 3300005536 Bacteria 1176
38 Ga0068853_100144387 3300005539 Bacteria 2138
39 Ga0070695_100001352 3300005545 Bacteria 13596
40 Ga0070695_100004478 3300005545 Bacteria 8207
41 Ga0070704_100054558 3300005549 Bacteria 2828
42 Ga0068859_100145688 3300005617 Bacteria 2443
43 Ga0068859_100494736 3300005617 Bacteria 1318
44 Ga0068862_100572637 3300005844 Bacteria 1081
45 Ga0081455_10141465 3300005937 Bacteria 1868
46 Ga0081538_10033282 3300005981 Bacteria 3434
47 Ga0081539_10002298 3300005985 Bacteria 27630
48 Ga0075365_10243566 3300006038 Bacteria 1263
49 Ga0075368_10059731 3300006042 Bacteria 1526
50 Ga0070712_100309940 3300006175 Unclassified 1280
51 Ga0075367_10181157 3300006178 Bacteria 1314
52 Ga0075370_10081716 3300006353 Bacteria 1858
53 Ga0075428_100025179 3300006844 Bacteria 6584
54 Ga0075428_100318365 3300006844 Unclassified 1672
55 Ga0075434_100015023 3300006871 Bacteria 7414
56 Ga0075434_100126996 3300006871 Bacteria 2567
57 Ga0075429_100097519 3300006880 Archaea 2564
58 Ga0068865_100445046 3300006881 Bacteria 1070
59 Ga0097620_100145685 3300006931 Bacteria 2443
60 Ga0097620_100494784 3300006931 Bacteria 1318
61 Ga0075435_100023749 3300007076 Bacteria 4748
62 Ga0111539_10114648 3300009094 Bacteria 3161
63 Ga0114129_10217179 3300009147 Bacteria 2581
64 Ga0105243_10132947 3300009148 Bacteria 2113
65 Ga0105241_10010604 3300009174 Bacteria 6759
66 Ga0105241_10144527 3300009174 Bacteria 1940
67 Ga0105248_10287897 3300009177 Bacteria 1850
68 Ga0105237_10000936 3300009545 Bacteria 39290
69 Ga0105238_10023456 3300009551 Bacteria 6290
70 Ga0105249_10232750 3300009553 Bacteria 1818
71 Ga0105249_10243395 3300009553 Bacteria 1779
72 Ga0105239_10045935 3300010375 Bacteria 4786
73 Ga0105239_10100027 3300010375 Bacteria 3207
74 Ga0157369_10244177 3300013105 Bacteria 1875
75 Ga0157378_10303642 3300013297 Bacteria 1545
76 Ga0157377_10000099 3300014745 Bacteria 61280
77 Ga0197907_10187277 3300020069 Bacteria 3959
78 Ga0206355_1570424 3300020076 Bacteria 2138
79 Ga0206352_10299545 3300020078 Bacteria 2145
80 Ga0206350_11051200 3300020080 Bacteria 4292
81 Ga0213872_10005687 3300021361 Bacteria 6354
82 Ga0213872_10090312 3300021361 Unclassified 1371
83 Ga0213871_10000696 3300021441 Bacteria 4891
84 Ga0224712_10002640 3300022467 Bacteria 4481
85 Ga0207705_10357513 3300025909 Bacteria 1126
86 Ga0207684_10310043 3300025910 Bacteria 1360
87 Ga0207684_10509154 3300025910 Bacteria 1032
88 Ga0207671_10000829 3300025914 Bacteria 39288
89 Ga0207693_10384749 3300025915 Unclassified 1097
90 Ga0207646_10000626 3300025922 Bacteria 46027
91 Ga0207646_10000679 3300025922 Bacteria 44119
92 Ga0207646_10056378 3300025922 Bacteria 3512
93 Ga0207646_10201626 3300025922 Unclassified 1797
94 Ga0207681_10689108 3300025923 Bacteria 849
95 Ga0207694_10081977 3300025924 Bacteria 2535
96 Ga0207687_10419616 3300025927 Bacteria 1104
97 Ga0207700_10313349 3300025928 Bacteria 1358
98 Ga0207706_10116146 3300025933 Bacteria 2353
99 Ga0207706_10329869 3300025933 Bacteria 1327
100 Ga0207709_10185706 3300025935 Unclassified 1472
101 Ga0207670_10288923 3300025936 Bacteria 1280
102 Ga0207711_10209084 3300025941 Bacteria 1782
103 Ga0207689_10080595 3300025942 Unclassified 2676
104 Ga0207667_10008465 3300025949 Bacteria 12216
105 Ga0207712_10169614 3300025961 Bacteria 1704
106 Ga0207668_10310629 3300025972 Unclassified 1305
107 Ga0207648_10408303 3300026089 Bacteria 1231
108 Ga0207675_100106214 3300026118 Bacteria 2647
109 Ga0268265_10664178 3300028380 Bacteria 1003
110 Ga0265334_10007120 3300028573 Bacteria 4798
111 Ga0265318_10140921 3300028577 Bacteria 885
112 Ga0307515_10011414 3300028794 Bacteria 16861
113 Ga0265338_10006465 3300028800 Bacteria 14933
114 Ga0265330_10000185 3300031235 Bacteria 48150
115 Ga0265316_10052433 3300031344 Bacteria 3200
116 Ga0265316_10350633 3300031344 Unclassified 1069
117 Ga0307513_10007695 3300031456 Bacteria 13922
118 Ga0265313_10015622 3300031595 Bacteria 4407
119 Ga0316576_10084778 3300031727 Bacteria 2355
120 Ga0307409_100054426 3300031995 Bacteria 3082
121 Ga0307414_10125895 3300032004 Bacteria 1980
122 Ga0307415_100263824 3300032126 Bacteria 1407
123 Ga0373943_0117931 3300035170 Bacteria 1408
124 Ga0316584_0316374 3300036712 Bacteria 1127
125 Ga0395900_0012664 3300037418 Bacteria 8623
126 Ga0395898_0058653 3300037466 Bacteria 3746
127 Ga0395901_0580353 3300038443 Bacteria 1133
128 Ga0436360_0271469 3300039438 Bacteria 9150
129 Ga0436361_0020010 3300039447 Bacteria 8954
130 Ga0436361_1076108 3300039447 Unclassified 4477
131 Ga0439435_0017280 3300042436 Bacteria 1821
132 Ga0453683_0042545 3300044673 Bacteria 2851
133 Ga0466963_0052837 3300044694 Bacteria 2697
134 Ga0453684_0200397 3300044712 Bacteria 2327
135 Ga0466957_0007181 3300044842 Bacteria 6299
136 Ga0466959_0028560 3300045049 Bacteria 4136
137 Ga0451576_0017167 3300045051 Bacteria 7962
138 Ga0451576_0193983 3300045051 Bacteria 2121
139 Ga0451576_0295778 3300045051 Bacteria 1693
140 Ga0466958_0139836 3300045836 Bacteria 1524
141 Ga0495629_0472764 3300046459 Bacteria 847
142 Ga0495580_0066506 3300046472 Bacteria 2523
143 Ga0495630_0115615 3300046517 Bacteria 2033
144 Ga0495654_0075500 3300046530 Bacteria 1590
145 Ga0495581_0056385 3300047315 Bacteria 2268
146 Ga0495674_0188955 3300047319 Bacteria 1713
147 Ga0496100_0017097 3300048903 Bacteria 4275
148 Ga0496102_0004294 3300048905 Bacteria 12048
149 Ga0496102_0036651 3300048905 Bacteria 4419
150 Ga0496103_0001946 3300048906 Bacteria 13351
151 Ga0496103_0284800 3300048906 Bacteria 1063
152 Ga0496104_0003413 3300048907 Bacteria 13708
153 Ga0496104_0004616 3300048907 Bacteria 12004
154 Ga0496105_0074028 3300048908 Bacteria 2814
155 Ga0496106_0017066 3300048909 Bacteria 5373
156 Ga0496106_0139726 3300048909 Bacteria 1905
157 Ga0496106_0245049 3300048909 Bacteria 1432
158 Ga0496107_0014025 3300048910 Bacteria 5610
159 Ga0496108_0004865 3300048911 Bacteria 10846
160 Ga0496109_0002167 3300048912 Bacteria 16318
161 Ga0496110_0002966 3300048913 Bacteria 12866
162 Ga0496112_0002069 3300048915 Bacteria 15908
163 Ga0496112_0677158 3300048915 Bacteria 960
164 Ga0496113_0001959 3300048916 Bacteria 11791
165 Ga0496113_0013951 3300048916 Bacteria 5464
166 Ga0496114_0472464 3300048917 Bacteria 1110
167 Ga0496115_0247729 3300048918 Bacteria 1467
168 Ga0496117_0001689 3300048920 Bacteria 30653
169 Ga0496118_0001821 3300048921 Bacteria 30627
170 Ga0496122_0029362 3300048925 Bacteria 4640
171 Ga0496125_0001114 3300048928 Bacteria 41120
172 Ga0496126_0002663 3300048929 Bacteria 23646
173 Ga0501039_0437665 3300049575 Bacteria 1027
174 Ga0501047_0041881 3300049581 Bacteria 4425
175 Ga0501048_0081227 3300049582 Bacteria 2287
176 Ga0501072_0007032 3300049588 Bacteria 8545
177 Ga0501074_0103072 3300049590 Bacteria 2043
178 Ga0501074_0173663 3300049590 Bacteria 1538
179 Ga0501076_0029981 3300049592 Bacteria 4235
180 Ga0501235_030925 3300049669 Bacteria 1208
181 Ga0501083_0160986 3300049744 Bacteria 1468
182 Ga0501045_0039618 3300049824 Bacteria 3429
183 nmdc:mga03683_125855_c1 3300050489 Unclassified 1143
184 nmdc:mga00v17_463605_c1 3300050491 Bacteria 822
185 nmdc:mga0yw44_68678_c1 3300050492 Bacteria 2192
186 nmdc:mga05p37_349300_c1 3300050507 Bacteria 1742
187 nmdc:mga05p37_52254_c2 3300050507 Bacteria 3980
188 nmdc:mga09592_143709_c1 3300050508 Bacteria 2057
189 nmdc:mga08y16_84866_c1 3300050511 Bacteria 3300
190 nmdc:mga0rr50_75832_c1 3300050513 Bacteria 2579
191 nmdc:mga0a205_242012_c1 3300050515 Bacteria 1685
192 nmdc:mga0a205_370436_c1 3300050515 Bacteria 1298
193 Ga0495619_0097202 3300053085 Bacteria 2000
194 Ga0500643_000282 3300053087 Bacteria 43928
195 Ga0500562_059400 3300053108 Bacteria 1027
196 Ga0500622_0005025 3300053156 Bacteria 8060
197 Ga0500637_0067407 3300053178 Bacteria 2056
198 Ga0501084_0180367 3300054114 Bacteria 1782
199 Ga0501082_0037907 3300060353 Bacteria 4157
200 Ga0466962_0012714 3300061719 Bacteria 4050
201 2508732902 2508501050 Bacteria 9633614
202 2770197223 2767802442 Bacteria 5747986
203 2776272089 2775506902 Bacteria 6208009
204 2776284029 2775506904 Bacteria 5954060
205 2886633428 2886627955 Bacteria 7618130
206 2888382118 2888378607 Bacteria 9652610
207 2903733196 2903727486 Bacteria 8281579
208 2954011766 2954011201 Bacteria 4762601
209 Ga0075433_10273718
210 JGI25406J46586_10027157
211 Ga0058863_11721162
212 Ga0058862_12870763
213 Ga0070690_100058494
214 Ga0070666_10572056
215 Ga0070673_100715858
216 Ga0070688_100350769
217 Ga0070713_100125445
218 Ga0070705_100024044
219 Ga0070694_100000643
220 Ga0070694_100244362
221 Ga0070694_100489288
222 Ga0070708_100025267
223 Ga0070708_100037007
224 Ga0070708_100251479
225 Ga0070708_100356155
226 Ga0070662_100354404
227 Ga0068867_100308764
228 Ga0068867_100316637
229 Ga0068867_100489859
230 Ga0070685_10057661
231 Ga0070706_100043393
232 Ga0070706_100362316
233 Ga0070707_100000316
234 Ga0070707_100018447
235 Ga0070707_100087891
236 Ga0070698_100004521
237 Ga0070698_100007549
238 Ga0070698_100017372
239 Ga0070698_100169532
240 Ga0070699_100009886
241 Ga0070699_100033350
242 Ga0070679_100774826
243 Ga0070697_100000820
244 Ga0070697_100193520
245 Ga0070697_100410219
246 Ga0068853_100144387
247 Ga0070695_100001352
248 Ga0070695_100004478
249 Ga0070704_100054558
250 Ga0068859_100145688
251 Ga0068859_100494736
252 Ga0068862_100572637
253 Ga0081455_10141465
254 Ga0081538_10033282
255 Ga0081539_10002298
256 Ga0075365_10243566
257 Ga0075368_10059731
258 Ga0070712_100309940
259 Ga0075367_10181157
260 Ga0075370_10081716
261 Ga0075428_100025179
262 Ga0075428_100318365
263 Ga0075434_100015023
264 Ga0075434_100126996
265 Ga0075429_100097519
266 Ga0068865_100445046
267 Ga0097620_100145685
268 Ga0097620_100494784
269 Ga0075435_100023749
270 Ga0111539_10114648
271 Ga0114129_10217179
272 Ga0105243_10132947
273 Ga0105241_10010604
274 Ga0105241_10144527
275 Ga0105248_10287897
276 Ga0105237_10000936
277 Ga0105238_10023456
278 Ga0105249_10232750
279 Ga0105249_10243395
280 Ga0105239_10045935
281 Ga0105239_10100027
282 Ga0157369_10244177
283 Ga0157378_10303642
284 Ga0157377_10000099
285 Ga0197907_10187277
286 Ga0206355_1570424
287 Ga0206352_10299545
288 Ga0206350_11051200
289 Ga0213872_10005687
290 Ga0213872_10090312
291 Ga0213871_10000696
292 Ga0224712_10002640
293 Ga0207705_10357513
294 Ga0207684_10310043
295 Ga0207684_10509154
296 Ga0207671_10000829
297 Ga0207693_10384749
298 Ga0207646_10000626
299 Ga0207646_10000679
300 Ga0207646_10056378
301 Ga0207646_10201626
302 Ga0207681_10689108
303 Ga0207694_10081977
304 Ga0207687_10419616
305 Ga0207700_10313349
306 Ga0207706_10116146
307 Ga0207706_10329869
308 Ga0207709_10185706
309 Ga0207670_10288923
310 Ga0207711_10209084
311 Ga0207689_10080595
312 Ga0207667_10008465
313 Ga0207712_10169614
314 Ga0207668_10310629
315 Ga0207648_10408303
316 Ga0207675_100106214
317 Ga0268265_10664178
318 Ga0265334_10007120
319 Ga0265318_10140921
320 Ga0307515_10011414
321 Ga0265338_10006465
322 Ga0265330_10000185
323 Ga0265316_10052433
324 Ga0265316_10350633
325 Ga0307513_10007695
326 Ga0265313_10015622
327 Ga0316576_10084778
328 Ga0307409_100054426
329 Ga0307414_10125895
330 Ga0307415_100263824
331 Ga0373943_0117931
332 Ga0316584_0316374
333 Ga0395900_0012664
334 Ga0395898_0058653
335 Ga0395901_0580353
336 Ga0436360_0271469
337 Ga0436361_0020010
338 Ga0436361_1076108
339 Ga0439435_0017280
340 Ga0453683_0042545
341 Ga0466963_0052837
342 Ga0453684_0200397
343 Ga0466957_0007181
344 Ga0466959_0028560
345 Ga0451576_0017167
346 Ga0451576_0193983
347 Ga0451576_0295778
348 Ga0466958_0139836
349 Ga0495629_0472764
350 Ga0495580_0066506
351 Ga0495630_0115615
352 Ga0495654_0075500
353 Ga0495581_0056385
354 Ga0495674_0188955
355 Ga0496100_0017097
356 Ga0496102_0004294
357 Ga0496102_0036651
358 Ga0496103_0001946
359 Ga0496103_0284800
360 Ga0496104_0003413
361 Ga0496104_0004616
362 Ga0496105_0074028
363 Ga0496106_0017066
364 Ga0496106_0139726
365 Ga0496106_0245049
366 Ga0496107_0014025
367 Ga0496108_0004865
368 Ga0496109_0002167
369 Ga0496110_0002966
370 Ga0496112_0002069
371 Ga0496112_0677158
372 Ga0496113_0001959
373 Ga0496113_0013951
374 Ga0496114_0472464
375 Ga0496115_0247729
376 Ga0496117_0001689
377 Ga0496118_0001821
378 Ga0496122_0029362
379 Ga0496125_0001114
380 Ga0496126_0002663
381 Ga0501039_0437665
382 Ga0501047_0041881
383 Ga0501048_0081227
384 Ga0501072_0007032
385 Ga0501074_0103072
386 Ga0501074_0173663
387 Ga0501076_0029981
388 Ga0501235_030925
389 Ga0501083_0160986
390 Ga0501045_0039618
391 nmdc:mga03683_125855_c1
392 nmdc:mga00v17_463605_c1
393 nmdc:mga0yw44_68678_c1
394 nmdc:mga05p37_349300_c1
395 nmdc:mga05p37_52254_c2
396 nmdc:mga09592_143709_c1
397 nmdc:mga08y16_84866_c1
398 nmdc:mga0rr50_75832_c1
399 nmdc:mga0a205_242012_c1
400 nmdc:mga0a205_370436_c1
401 Ga0495619_0097202
402 Ga0500643_000282
403 Ga0500562_059400
404 Ga0500622_0005025
405 Ga0500637_0067407
406 Ga0501084_0180367
407 Ga0501082_0037907
408 Ga0466962_0012714
409 2508732902
410 2770197223
411 2776272089
412 2776284029
413 2886633428
414 2888382118
415 2903733196
416 2954011766

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12804

NTP_transf_3

MobA-like NTP transferase domain

29

272

0.92

PF00483

NTP_transferase

Nucleotidyl transferase

28

256

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xhw-assembly1.cif.gz_A crystal structure of hddc from yersinia pseudotuberculosis 0.8922 2 246
6jq8-assembly1.cif.gz_A crystal structure of hddc from yersinia pseudotuberculosis complexed with gmp-pn 0.891 2 246
8hhd-assembly1.cif.gz_B crystal structure of pamuru 0.8831 1 246
1wvc-assembly1.cif.gz_A alpha-d-glucose-1-phosphate cytidylyltransferase complexed with ctp 0.8822 2 254
7d72-assembly1.cif.gz_F cryo-em structures of human gmppa/gmppb complex bound to gdp-mannose 0.8807 1 242
ID Description Score Start End Superfamily
af_L7N6A5_2_240_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8883 2 249 3.90.550.10
1tzfA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8709 2 254 3.90.550.10
af_Q8ILP1_1_241_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8705 1 249 3.90.550.10
af_L7N6A5_2_240_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8637 2 249 3.90.550.10
4y7vA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8635 1 247 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A838W7T2-F1-model_v4 NTP transferase domain-containing protein 0.9684 1 94 GO:0047343
AF-A0A382ARP2-F1-model_v4 Nucleotidyl transferase domain-containing protein 0.9634 1 136 GO:0009058
GO:0047343
AF-A0A838W7T2-F1-model_v4 NTP transferase domain-containing protein 0.9585 1 94 GO:0047343
AF-A0A529I2Z1-F1-model_v4 deleted 0.9564 1 148
AF-A0A850KEP1-F1-model_v4 Glucose-1-phosphate cytidylyltransferase 0.9522 1 147 GO:0009058
GO:0047343

Map