F313666

General Info

Members Datasets Scaffolds Average Seq Length
205 149 410 319

Family's Representative Sequence

Representative Sequence 3300006175|Ga0070712_100005127|Ga0070712_1000051272
Length 368
Sequence MYGAAVRCNCSPRGQSTRADSTPRKSVSWQRPPPFHLVGGDELGAVEMLIRHRRGWELRKSEATPEEVFLGRRRLLKGVAAGSILASGLGAVIFAAHYGNRDVAPQMAPPAEDDPSAGLYPAKRNPRFTLDRPLTDEKFATTYNNFYEFGSQKSIAAEAQALKIRPWTIKIDGLVKMPLEERLYRHRCVEAWSMAVPWSGFPMAAFVDFAKPLGSAKYVQMETFLDPKTAPGQGEFWYPWPYVEGLTIAEAGNELAFLVTGMYGKPVPKQDGAPLRLALPWKYGFKSVKSIMHFSFTDKRPVSFWETVQGNEYGFWANVNPDVPHPRWSQATERVLGTNERRPTLKWNGYGEFVAHLYDGLQSERLFF

Samples

Sample ID Description Type Environment
1 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
46 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
48 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
69 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
84 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
87 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
88 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
89 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
92 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
93 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
107 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
108 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
109 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
110 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
111 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
112 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
113 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
114 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
117 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
121 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
122 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
123 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
124 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
125 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
126 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
127 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
128 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
129 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
130 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
131 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
132 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
133 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
134 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
135 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
136 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
137 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
138 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
139 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
140 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
141 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
142 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
143 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
144 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
145 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
146 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
147 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
148 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
149 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.2
Metatranscriptomes 1.95
Isolates 5.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.22
Nodule 0.98
Rhizoplane 0
Rhizosphere 75.12
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070712_100005127 3300006175 Bacteria 8105
2 JGI25151J46595_10000067 3300003187 Bacteria 142586
3 JGI25151J46595_10000940 3300003187 Bacteria 22523
4 JGI25153J46596_10024888 3300003215 Bacteria 2150
5 JGI25160J50197_1011268 3300003354 Bacteria 3179
6 JGI25404J52841_10001276 3300003659 Bacteria 4370
7 Ga0055526_1002484 3300003771 Bacteria 12457
8 Ga0070680_100008111 3300005336 Bacteria 8019
9 Ga0070680_100011347 3300005336 Bacteria 6891
10 Ga0070660_100044126 3300005339 Bacteria 3409
11 Ga0070709_10013071 3300005434 Bacteria 4660
12 Ga0070713_100009934 3300005436 Bacteria 6852
13 Ga0070710_10074454 3300005437 Bacteria 1965
14 Ga0070711_100113892 3300005439 Bacteria 1989
15 Ga0070711_100276914 3300005439 Bacteria 1326
16 Ga0070681_10111070 3300005458 Bacteria 2680
17 Ga0070679_100165721 3300005530 Bacteria 2183
18 Ga0070697_100111259 3300005536 Bacteria 2283
19 Ga0068853_100216122 3300005539 Bacteria 1749
20 Ga0068860_100457761 3300005843 Bacteria 1269
21 Ga0081540_1000282 3300005983 Bacteria 52922
22 Ga0081540_1014991 3300005983 Bacteria 4926
23 Ga0081539_10059638 3300005985 Bacteria 2099
24 Ga0070717_10095381 3300006028 Bacteria 2518
25 Ga0075364_10101314 3300006051 Bacteria 1917
26 Ga0070712_100001947 3300006175 Bacteria 12657
27 Ga0070712_100185537 3300006175 Bacteria 1624
28 Ga0075362_10092827 3300006177 Bacteria 1403
29 Ga0075369_10028432 3300006186 Bacteria 2343
30 Ga0075370_10035088 3300006353 Bacteria 2814
31 Ga0075428_100004137 3300006844 Bacteria 15966
32 Ga0075428_100090241 3300006844 Bacteria 3343
33 Ga0075430_100005148 3300006846 Bacteria 11011
34 Ga0075431_100010931 3300006847 Bacteria 9132
35 Ga0075434_100450305 3300006871 Bacteria 1308
36 Ga0099795_10013101 3300007788 Bacteria 2535
37 Ga0105240_10014448 3300009093 Bacteria 10781
38 Ga0111539_10011999 3300009094 Bacteria 10864
39 Ga0114129_10054451 3300009147 Bacteria 5609
40 Ga0114129_10080194 3300009147 Bacteria 4537
41 Ga0114129_10086695 3300009147 Bacteria 4342
42 Ga0105237_10031248 3300009545 Bacteria 5401
43 Ga0105249_10266134 3300009553 Bacteria 1705
44 Ga0157371_10069348 3300013102 Bacteria 2496
45 Ga0157369_10530453 3300013105 Bacteria 1217
46 Ga0157378_10735901 3300013297 Bacteria 1008
47 Ga0157380_10311483 3300014326 Bacteria 1455
48 Ga0157380_10339510 3300014326 Bacteria 1400
49 Ga0163161_10071519 3300017792 Bacteria 2538
50 Ga0206354_11142503 3300020081 Bacteria 2204
51 Ga0206354_11463766 3300020081 Bacteria 3404
52 Ga0206353_10483267 3300020082 Bacteria 2541
53 Ga0213875_10001866 3300021388 Bacteria 13085
54 Ga0213875_10001970 3300021388 Bacteria 12692
55 Ga0224712_10075573 3300022467 Bacteria 1378
56 Ga0209130_1003347 3300025284 Bacteria 6893
57 Ga0209025_1000008 3300025294 Bacteria 1130876
58 Ga0209025_1000576 3300025294 Bacteria 66598
59 Ga0209564_1000065 3300025295 Bacteria 315205
60 Ga0209758_1006773 3300025297 Bacteria 8051
61 Ga0207426_1001035 3300025302 Bacteria 26507
62 Ga0207699_10037098 3300025906 Bacteria 2783
63 Ga0207705_10116205 3300025909 Bacteria 1981
64 Ga0207707_10020994 3300025912 Bacteria 5704
65 Ga0207707_10026853 3300025912 Bacteria 5031
66 Ga0207707_10115293 3300025912 Bacteria 2348
67 Ga0207695_10136268 3300025913 Bacteria 2408
68 Ga0207695_10201310 3300025913 Bacteria 1905
69 Ga0207693_10015405 3300025915 Bacteria 6134
70 Ga0207693_10027540 3300025915 Bacteria 4492
71 Ga0207693_10047605 3300025915 Bacteria 3369
72 Ga0207663_10073087 3300025916 Bacteria 2218
73 Ga0207660_10012941 3300025917 Bacteria 5465
74 Ga0207660_10030973 3300025917 Bacteria 3680
75 Ga0207657_10023944 3300025919 Bacteria 5669
76 Ga0207652_10002869 3300025921 Bacteria 14429
77 Ga0207659_10003515 3300025926 Bacteria 9417
78 Ga0207664_10000823 3300025929 Bacteria 21042
79 Ga0207664_10081916 3300025929 Bacteria 2627
80 Ga0207664_10513722 3300025929 Bacteria 1073
81 Ga0207665_10084751 3300025939 Bacteria 2187
82 Ga0207667_10078473 3300025949 Bacteria 3422
83 Ga0207639_10101928 3300026041 Bacteria 2322
84 Ga0207678_10356466 3300026067 Bacteria 1262
85 Ga0209998_10006183 3300027717 Bacteria 2488
86 Ga0209974_10006548 3300027876 Bacteria 4061
87 Ga0265338_10037832 3300028800 Bacteria 4583
88 Ga0265325_10117786 3300031241 Bacteria 1284
89 Ga0307408_100436252 3300031548 Bacteria 1133
90 Ga0307516_10380400 3300031730 Bacteria 1073
91 Ga0307409_100433102 3300031995 Bacteria 1265
92 Ga0373926_0046982 3300035083 Bacteria 1550
93 Ga0373926_0114218 3300035083 Bacteria 1016
94 Ga0316574_0001729 3300035398 Bacteria 10572
95 Ga0373931_0014823 3300035691 Bacteria 3816
96 Ga0373927_0118438 3300035695 Bacteria 1728
97 Ga0373947_0052569 3300035725 Bacteria 2454
98 Ga0373937_0064472 3300036401 Bacteria 3370
99 Ga0316584_0031455 3300036712 Bacteria 3924
100 Ga0373925_0018858 3300037068 Bacteria 5014
101 Ga0373925_0166902 3300037068 Bacteria 1736
102 Ga0395900_0004380 3300037418 Bacteria 14982
103 Ga0395898_0004026 3300037466 Bacteria 16158
104 Ga0395898_0047970 3300037466 Bacteria 4189
105 Ga0395898_0468952 3300037466 Bacteria 1198
106 Ga0436364_0573660 3300037853 Bacteria 25797
107 Ga0436364_0696358 3300037853 Bacteria 2771
108 Ga0436364_0749079 3300037853 Bacteria 1849
109 Ga0436364_0948162 3300037853 Bacteria 2589
110 Ga0436364_1365313 3300037853 Bacteria 1977
111 Ga0395901_0005845 3300038443 Bacteria 12443
112 Ga0395901_0044912 3300038443 Bacteria 4583
113 Ga0400483_013958 3300039062 Bacteria 19725
114 Ga0400483_043154 3300039062 Bacteria 13631
115 Ga0400483_086161 3300039062 Bacteria 9392
116 Ga0400483_237590 3300039062 Bacteria 3248
117 Ga0237816_01405 3300039145 Bacteria 1952
118 Ga0436365_0500027 3300039437 Bacteria 1014
119 Ga0436360_0503304 3300039438 Bacteria 6402
120 Ga0436360_1065521 3300039438 Bacteria 1644
121 Ga0436360_1117258 3300039438 Bacteria 3428
122 Ga0436363_1164638 3300039450 Bacteria 2219
123 Ga0436363_1238507 3300039450 Bacteria 1169
124 Ga0436362_1123526 3300039453 Bacteria 4762
125 Ga0439431_0010357 3300041997 Bacteria 2116
126 Ga0451576_0009627 3300045051 Bacteria 11178
127 Ga0451576_0151453 3300045051 Bacteria 2419
128 Ga0451576_0200056 3300045051 Bacteria 2087
129 Ga0495580_0105902 3300046472 Bacteria 1954
130 Ga0495610_0089096 3300046512 Bacteria 1401
131 Ga0495640_0057918 3300046533 Bacteria 2644
132 Ga0495674_0214888 3300047319 Bacteria 1592
133 Ga0495674_0257403 3300047319 Bacteria 1435
134 Ga0496119_0028557 3300048922 Bacteria 3803
135 Ga0501032_0017765 3300049569 Bacteria 4992
136 Ga0501033_0030293 3300049570 Bacteria 4066
137 Ga0501033_0034434 3300049570 Bacteria 3799
138 Ga0501033_0119642 3300049570 Bacteria 1912
139 Ga0501034_0132769 3300049571 Bacteria 2472
140 Ga0501038_0065206 3300049574 Bacteria 3103
141 Ga0501038_0171485 3300049574 Bacteria 1756
142 Ga0501039_0091147 3300049575 Bacteria 2375
143 Ga0501040_0185679 3300049576 Bacteria 1474
144 Ga0501041_0019006 3300049577 Bacteria 4095
145 Ga0501042_0043495 3300049578 Bacteria 3198
146 Ga0501046_0065489 3300049580 Bacteria 2834
147 Ga0501047_0112888 3300049581 Bacteria 2599
148 Ga0501068_0028772 3300049584 Bacteria 3288
149 Ga0501069_0017987 3300049585 Bacteria 3811
150 Ga0501069_0098618 3300049585 Bacteria 1657
151 Ga0501070_0019921 3300049586 Bacteria 5625
152 Ga0501070_0160050 3300049586 Bacteria 1856
153 Ga0501070_0272077 3300049586 Bacteria 1383
154 Ga0501071_0057065 3300049587 Bacteria 2821
155 Ga0501073_0014831 3300049589 Bacteria 5656
156 Ga0501073_0021311 3300049589 Bacteria 4672
157 Ga0501073_0057272 3300049589 Bacteria 2725
158 Ga0501074_0018965 3300049590 Bacteria 4997
159 Ga0501074_0202348 3300049590 Bacteria 1415
160 Ga0501075_0292471 3300049591 Bacteria 1241
161 Ga0501077_0017639 3300049593 Bacteria 4507
162 Ga0501079_0023054 3300049741 Bacteria 4778
163 Ga0501080_0038450 3300049742 Bacteria 4467
164 Ga0501080_0101705 3300049742 Bacteria 2666
165 Ga0501081_0116518 3300049743 Bacteria 1899
166 Ga0501083_0000758 3300049744 Bacteria 21096
167 Ga0501083_0032967 3300049744 Bacteria 3548
168 Ga0501083_0092780 3300049744 Bacteria 1993
169 Ga0501035_0048586 3300049822 Bacteria 3805
170 Ga0501035_0078128 3300049822 Bacteria 2924
171 Ga0501044_0109228 3300049823 Bacteria 2775
172 nmdc:mga00v17_23048_c1 3300050491 Bacteria 3599
173 nmdc:mga0yw44_107820_c1 3300050492 Bacteria 1782
174 nmdc:mga0k408_41999_c1 3300050493 Bacteria 2634
175 nmdc:mga05p37_154022_c1 3300050507 Bacteria 2810
176 nmdc:mga05p37_157289_c1 3300050507 Bacteria 2777
177 nmdc:mga05p37_157401_c1 3300050507 Bacteria 2776
178 nmdc:mga09592_186265_c1 3300050508 Bacteria 1796
179 nmdc:mga09592_74814_c1 3300050508 Bacteria 2878
180 nmdc:mga0qj67_5739_c1 3300050509 Bacteria 9085
181 nmdc:mga06r32_313598_c1 3300050510 Bacteria 1554
182 nmdc:mga06r32_46903_c1 3300050510 Bacteria 4125
183 nmdc:mga08y16_38729_c1 3300050511 Bacteria 5004
184 nmdc:mga0n895_378064_c1 3300050512 Bacteria 1433
185 nmdc:mga0rr50_22701_c2 3300050513 Bacteria 3120
186 Ga0500562_045969 3300053108 Bacteria 1164
187 Ga0500595_048168 3300053119 Bacteria 1332
188 Ga0500642_0052905 3300053130 Bacteria 1799
189 Ga0500568_0012597 3300053139 Bacteria 3882
190 Ga0500645_035463 3300053730 Bacteria 1486
191 Ga0501084_0045504 3300054114 Bacteria 3674
192 Ga0590075_009715 3300059424 Bacteria 2307
193 Ga0530510_0061444 3300061734 Bacteria 2720
194 2596371642 2595698237 Bacteria 6712432
195 2738743923 2738541281 Bacteria 5112672
196 2739353153 2738543032 Bacteria 5115625
197 2821446925 2821443989 Bacteria 7658172
198 2842338286 2842333319 Bacteria 8899485
199 2842699223 2842698319 Bacteria 5190321
200 2844534287 2844533157 Bacteria 7517899
201 2889307219 2889306138 Bacteria 6358934
202 2902411070 2902405164 Bacteria 6784948
203 2928127899 2928125067 Bacteria 5937560
204 3003668988 3003665799 Bacteria 7279786
205 643603447 643348564 Bacteria 8839022
206 Ga0070712_100005127
207 JGI25151J46595_10000067
208 JGI25151J46595_10000940
209 JGI25153J46596_10024888
210 JGI25160J50197_1011268
211 JGI25404J52841_10001276
212 Ga0055526_1002484
213 Ga0070680_100008111
214 Ga0070680_100011347
215 Ga0070660_100044126
216 Ga0070709_10013071
217 Ga0070713_100009934
218 Ga0070710_10074454
219 Ga0070711_100113892
220 Ga0070711_100276914
221 Ga0070681_10111070
222 Ga0070679_100165721
223 Ga0070697_100111259
224 Ga0068853_100216122
225 Ga0068860_100457761
226 Ga0081540_1000282
227 Ga0081540_1014991
228 Ga0081539_10059638
229 Ga0070717_10095381
230 Ga0075364_10101314
231 Ga0070712_100001947
232 Ga0070712_100185537
233 Ga0075362_10092827
234 Ga0075369_10028432
235 Ga0075370_10035088
236 Ga0075428_100004137
237 Ga0075428_100090241
238 Ga0075430_100005148
239 Ga0075431_100010931
240 Ga0075434_100450305
241 Ga0099795_10013101
242 Ga0105240_10014448
243 Ga0111539_10011999
244 Ga0114129_10054451
245 Ga0114129_10080194
246 Ga0114129_10086695
247 Ga0105237_10031248
248 Ga0105249_10266134
249 Ga0157371_10069348
250 Ga0157369_10530453
251 Ga0157378_10735901
252 Ga0157380_10311483
253 Ga0157380_10339510
254 Ga0163161_10071519
255 Ga0206354_11142503
256 Ga0206354_11463766
257 Ga0206353_10483267
258 Ga0213875_10001866
259 Ga0213875_10001970
260 Ga0224712_10075573
261 Ga0209130_1003347
262 Ga0209025_1000008
263 Ga0209025_1000576
264 Ga0209564_1000065
265 Ga0209758_1006773
266 Ga0207426_1001035
267 Ga0207699_10037098
268 Ga0207705_10116205
269 Ga0207707_10020994
270 Ga0207707_10026853
271 Ga0207707_10115293
272 Ga0207695_10136268
273 Ga0207695_10201310
274 Ga0207693_10015405
275 Ga0207693_10027540
276 Ga0207693_10047605
277 Ga0207663_10073087
278 Ga0207660_10012941
279 Ga0207660_10030973
280 Ga0207657_10023944
281 Ga0207652_10002869
282 Ga0207659_10003515
283 Ga0207664_10000823
284 Ga0207664_10081916
285 Ga0207664_10513722
286 Ga0207665_10084751
287 Ga0207667_10078473
288 Ga0207639_10101928
289 Ga0207678_10356466
290 Ga0209998_10006183
291 Ga0209974_10006548
292 Ga0265338_10037832
293 Ga0265325_10117786
294 Ga0307408_100436252
295 Ga0307516_10380400
296 Ga0307409_100433102
297 Ga0373926_0046982
298 Ga0373926_0114218
299 Ga0316574_0001729
300 Ga0373931_0014823
301 Ga0373927_0118438
302 Ga0373947_0052569
303 Ga0373937_0064472
304 Ga0316584_0031455
305 Ga0373925_0018858
306 Ga0373925_0166902
307 Ga0395900_0004380
308 Ga0395898_0004026
309 Ga0395898_0047970
310 Ga0395898_0468952
311 Ga0436364_0573660
312 Ga0436364_0696358
313 Ga0436364_0749079
314 Ga0436364_0948162
315 Ga0436364_1365313
316 Ga0395901_0005845
317 Ga0395901_0044912
318 Ga0400483_013958
319 Ga0400483_043154
320 Ga0400483_086161
321 Ga0400483_237590
322 Ga0237816_01405
323 Ga0436365_0500027
324 Ga0436360_0503304
325 Ga0436360_1065521
326 Ga0436360_1117258
327 Ga0436363_1164638
328 Ga0436363_1238507
329 Ga0436362_1123526
330 Ga0439431_0010357
331 Ga0451576_0009627
332 Ga0451576_0151453
333 Ga0451576_0200056
334 Ga0495580_0105902
335 Ga0495610_0089096
336 Ga0495640_0057918
337 Ga0495674_0214888
338 Ga0495674_0257403
339 Ga0496119_0028557
340 Ga0501032_0017765
341 Ga0501033_0030293
342 Ga0501033_0034434
343 Ga0501033_0119642
344 Ga0501034_0132769
345 Ga0501038_0065206
346 Ga0501038_0171485
347 Ga0501039_0091147
348 Ga0501040_0185679
349 Ga0501041_0019006
350 Ga0501042_0043495
351 Ga0501046_0065489
352 Ga0501047_0112888
353 Ga0501068_0028772
354 Ga0501069_0017987
355 Ga0501069_0098618
356 Ga0501070_0019921
357 Ga0501070_0160050
358 Ga0501070_0272077
359 Ga0501071_0057065
360 Ga0501073_0014831
361 Ga0501073_0021311
362 Ga0501073_0057272
363 Ga0501074_0018965
364 Ga0501074_0202348
365 Ga0501075_0292471
366 Ga0501077_0017639
367 Ga0501079_0023054
368 Ga0501080_0038450
369 Ga0501080_0101705
370 Ga0501081_0116518
371 Ga0501083_0000758
372 Ga0501083_0032967
373 Ga0501083_0092780
374 Ga0501035_0048586
375 Ga0501035_0078128
376 Ga0501044_0109228
377 nmdc:mga00v17_23048_c1
378 nmdc:mga0yw44_107820_c1
379 nmdc:mga0k408_41999_c1
380 nmdc:mga05p37_154022_c1
381 nmdc:mga05p37_157289_c1
382 nmdc:mga05p37_157401_c1
383 nmdc:mga09592_186265_c1
384 nmdc:mga09592_74814_c1
385 nmdc:mga0qj67_5739_c1
386 nmdc:mga06r32_313598_c1
387 nmdc:mga06r32_46903_c1
388 nmdc:mga08y16_38729_c1
389 nmdc:mga0n895_378064_c1
390 nmdc:mga0rr50_22701_c2
391 Ga0500562_045969
392 Ga0500595_048168
393 Ga0500642_0052905
394 Ga0500568_0012597
395 Ga0500645_035463
396 Ga0501084_0045504
397 Ga0590075_009715
398 Ga0530510_0061444
399 2596371642
400 2738743923
401 2739353153
402 2821446925
403 2842338286
404 2842699223
405 2844534287
406 2889307219
407 2902411070
408 2928127899
409 3003668988
410 643603447

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00174

Oxidored_molyb

Oxidoreductase molybdopterin binding domain

155

305

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xdq-assembly3.cif.gz_C structural and biochemical identification of a novel bacterial oxidoreductase 0.9515 60 310
1xdy-assembly7.cif.gz_G structural and biochemical identification of a novel bacterial oxidoreductase, w-containing cofactor 0.9491 61 310
1xdy-assembly7.cif.gz_G structural and biochemical identification of a novel bacterial oxidoreductase, w-containing cofactor 0.9069 61 310
1xdq-assembly3.cif.gz_C structural and biochemical identification of a novel bacterial oxidoreductase 0.9027 60 310
1ogp-assembly3.cif.gz_E the crystal structure of plant sulfite oxidase provides insight into sulfite oxidation in plants and animals 0.8257 101 255
ID Description Score Start End Superfamily
1xdyH00 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.9544 60 310 3.90.420.10
1xdyH00 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.9054 60 310 3.90.420.10
af_P96400_291_442_3.90.420.10 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.8444 96 249 3.90.420.10
af_P11035_116_359_3.90.420.10 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.8293 99 255 3.90.420.10
2biiB01 Alpha Beta;Alpha-Beta Complex;Sulfite Oxidase; Chain A, domain 2;Oxidoreductase, molybdopterin-binding domain 0.8196 101 256 3.90.420.10
ID Description Score Start End GO Terms
AF-A0A3C0MEV3-F1-model_v4 Protein-methionine-sulfoxide reductase catalytic subunit MsrP 0.9803 81 240
AF-A0A3C0MEV3-F1-model_v4 Protein-methionine-sulfoxide reductase catalytic subunit MsrP 0.9743 81 240
AF-D9PGU8-F1-model_v4 Oxidoreductase molybdopterin binding (EC 1.8.2.1) 0.9717 65 167 GO:0050310
AF-A0A7X3RC42-F1-model_v4 Protein-methionine-sulfoxide reductase catalytic subunit MsrP (EC 1.8.5.-) 0.9686 99 309 GO:0016491
AF-A0A162C394-F1-model_v4 Oxidoreductase molybdopterin-binding domain-containing protein 0.9671 86 230

Map