F312853

General Info

Members Datasets Scaffolds Average Seq Length
204 94 408 338

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0029790|Ga0453684_0029790_936_2078
Length 380
Sequence MRFLCHKFLVIYKGESACVFRENFERRSIISQFLFEESDVAKTDQRPLLEVRNLKTYFYTEDGVVSAVDGVNFEVYPGEVLGLVGESGCGKSVTSLSIMRLIAPPGKITEGEILLDGQNLLNLSEDEMTKVRGNRISMIFQQPQTALNPVFQVNDQIAEVLNIHKNFGKDAGKTRAIELLKMVGIPDAERRAEAYPHELSGGMAQRVMIAMALACVPELLIADEPTTALDVTIQAQILDLMRDLRSKMNTSVILITHDLGVVAEMAERVAVMYAGEIVEQSNVNPLFEQPLHPYTQGLIGSIPVLGQLKERLDVIPGSVPNLVNLPPGCRFAPRCAAREKYGLTICTDKKPSLAEAAPGHLVRCWLYQNAEGHQAPLKAK

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
41 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
44 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
45 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
46 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
47 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
48 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
49 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
54 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
55 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
56 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
57 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
58 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
59 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
60 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
66 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
67 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
68 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
72 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
73 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
74 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
75 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
76 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
77 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
78 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
79 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
83 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
84 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
85 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
86 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
87 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
88 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
89 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
90 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
91 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
92 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
93 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
94 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.55
Metatranscriptomes 1.96
Isolates 0.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.04
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0029790 3300044712 Bacteria 7734
2 SwRhRL3b_contig_667182 2162886006 Bacteria 2316
3 SwRhRL2b_contig_2290580 2162886007 Bacteria 5923
4 JGI25406J46586_10021072 3300003203 Bacteria 2622
5 Ga0065707_10081809 3300005295 Bacteria 37808
6 Ga0065707_10083479 3300005295 Bacteria 9015
7 Ga0065707_10154722 3300005295 Bacteria 1599
8 Ga0065707_10179550 3300005295 Bacteria 1427
9 Ga0070683_100035336 3300005329 Bacteria 4569
10 Ga0070689_100149506 3300005340 Bacteria 1883
11 Ga0070689_100181619 3300005340 Bacteria 1709
12 Ga0070703_10029819 3300005406 Bacteria 1640
13 Ga0070681_10099493 3300005458 Bacteria 2854
14 Ga0070698_100010333 3300005471 Bacteria 9965
15 Ga0070698_100019427 3300005471 Bacteria 7133
16 Ga0070699_100000855 3300005518 Bacteria 28296
17 Ga0070679_100046676 3300005530 Bacteria 4318
18 Ga0070695_100149324 3300005545 Bacteria 1629
19 Ga0070696_100010286 3300005546 Bacteria 6264
20 Ga0068859_100050033 3300005617 Bacteria 4197
21 Ga0068859_100092881 3300005617 Bacteria 3069
22 Ga0068864_100187382 3300005618 Bacteria 1895
23 Ga0068861_100212672 3300005719 Bacteria 1630
24 Ga0068862_100039048 3300005844 Bacteria 4030
25 Ga0068862_100130931 3300005844 Bacteria 2219
26 Ga0081538_10009460 3300005981 Bacteria 8132
27 Ga0081540_1000081 3300005983 Bacteria 102423
28 Ga0081539_10001287 3300005985 Bacteria 44102
29 Ga0081539_10012626 3300005985 Bacteria 6479
30 Ga0075427_10000638 3300006194 Bacteria 4118
31 Ga0075428_100041910 3300006844 Bacteria 5033
32 Ga0075428_100082506 3300006844 Bacteria 3508
33 Ga0075428_100211782 3300006844 Bacteria 2094
34 Ga0075430_100155780 3300006846 Bacteria 1902
35 Ga0075431_100021456 3300006847 Bacteria 6606
36 Ga0075433_10056716 3300006852 Bacteria 3423
37 Ga0075433_10262530 3300006852 Bacteria 1531
38 Ga0075434_100336262 3300006871 Bacteria 1531
39 Ga0075429_100012559 3300006880 Bacteria 7348
40 Ga0075429_100013988 3300006880 Bacteria 6955
41 Ga0075429_100020854 3300006880 Bacteria 5687
42 Ga0075429_100089092 3300006880 Bacteria 2689
43 Ga0097620_100050033 3300006931 Bacteria 4197
44 Ga0097620_100092882 3300006931 Bacteria 3069
45 Ga0111539_10024640 3300009094 Bacteria 7380
46 Ga0111539_10362998 3300009094 Bacteria 1686
47 Ga0114129_10018842 3300009147 Bacteria 9831
48 Ga0114129_10036573 3300009147 Bacteria 6932
49 Ga0114129_10040622 3300009147 Bacteria 6557
50 Ga0114129_10051384 3300009147 Bacteria 5786
51 Ga0114129_10105917 3300009147 Bacteria 3885
52 Ga0105243_10035521 3300009148 Bacteria 3864
53 Ga0105243_10256108 3300009148 Bacteria 1565
54 Ga0105249_10007850 3300009553 Bacteria 9294
55 Ga0105249_10104641 3300009553 Bacteria 2667
56 Ga0207684_10220331 3300025910 Bacteria 1637
57 Ga0207662_10152804 3300025918 Bacteria 1469
58 Ga0207652_10037894 3300025921 Bacteria 4083
59 Ga0207646_10236747 3300025922 Bacteria 1649
60 Ga0207712_10027615 3300025961 Bacteria 3791
61 Ga0207712_10117989 3300025961 Bacteria 2002
62 Ga0207675_100192154 3300026118 Bacteria 1958
63 Ga0207428_10074517 3300027907 Bacteria 2661
64 Ga0268265_10303090 3300028380 Bacteria 1439
65 Ga0268264_10271003 3300028381 Bacteria 1586
66 Ga0265323_10011150 3300028653 Bacteria 3630
67 Ga0265323_10019189 3300028653 Bacteria 2639
68 Ga0265322_10008186 3300028654 Bacteria 3047
69 Ga0265328_10028454 3300031239 Bacteria 2091
70 Ga0265320_10009476 3300031240 Bacteria 5872
71 Ga0265329_10046761 3300031242 Bacteria 1382
72 Ga0265340_10016139 3300031247 Bacteria 3871
73 Ga0265331_10071305 3300031250 Bacteria 1625
74 Ga0265316_10017168 3300031344 Bacteria 6261
75 Ga0265316_10056508 3300031344 Bacteria 3064
76 Ga0265316_10058604 3300031344 Bacteria 2998
77 Ga0307513_10005292 3300031456 Bacteria 17079
78 Ga0307408_100327236 3300031548 Bacteria 1293
79 Ga0265313_10052430 3300031595 Bacteria 1947
80 Ga0316575_10006649 3300031665 Bacteria 4169
81 Ga0316579_10025877 3300031691 Bacteria 2652
82 Ga0316579_10034387 3300031691 Bacteria 2332
83 Ga0265342_10010262 3300031712 Bacteria 6520
84 Ga0316576_10009720 3300031727 Bacteria 6222
85 Ga0316576_10009866 3300031727 Bacteria 6180
86 Ga0316576_10024489 3300031727 Bacteria 4214
87 Ga0316576_10037886 3300031727 Bacteria 3454
88 Ga0316576_10042626 3300031727 Bacteria 3271
89 Ga0316576_10121731 3300031727 Bacteria 1960
90 Ga0316578_10024785 3300031728 Bacteria 3368
91 Ga0316578_10029653 3300031728 Bacteria 3106
92 Ga0316578_10046437 3300031728 Bacteria 2531
93 Ga0316578_10142275 3300031728 Bacteria 1445
94 Ga0316577_10002905 3300031733 Bacteria 8567
95 Ga0316577_10018105 3300031733 Bacteria 3893
96 Ga0316577_10023632 3300031733 Bacteria 3413
97 Ga0307413_10036525 3300031824 Bacteria 2829
98 Ga0307410_10005609 3300031852 Bacteria 6670
99 Ga0307406_10026146 3300031901 Bacteria 3502
100 Ga0307406_10189116 3300031901 Bacteria 1506
101 Ga0307416_100045475 3300032002 Bacteria 3457
102 Ga0307414_10066539 3300032004 Bacteria 2577
103 Ga0316583_10012309 3300032133 Bacteria 3087
104 Ga0316585_10001578 3300032137 Bacteria 6043
105 Ga0316585_10006708 3300032137 Bacteria 3296
106 Ga0316585_10018651 3300032137 Bacteria 2107
107 Ga0316580_10007208 3300032139 Bacteria 3304
108 Ga0316593_10008653 3300032168 Bacteria 2846
109 Ga0316592_1017480 3300033524 Bacteria 1505
110 Ga0316596_1010503 3300033541 Bacteria 2242
111 Ga0316596_1019516 3300033541 Bacteria 1720
112 Ga0316574_0020537 3300035398 Bacteria 3910
113 Ga0316574_0180148 3300035398 Bacteria 1359
114 Ga0316582_0000152 3300036647 Bacteria 20917
115 Ga0316582_0004082 3300036647 Bacteria 7301
116 Ga0316582_0005484 3300036647 Bacteria 6541
117 Ga0316582_0024106 3300036647 Bacteria 3637
118 Ga0316582_0044959 3300036647 Bacteria 2779
119 Ga0316582_0063434 3300036647 Bacteria 2374
120 Ga0316584_0001061 3300036712 Bacteria 16031
121 Ga0316584_0008542 3300036712 Bacteria 7059
122 Ga0316584_0021224 3300036712 Bacteria 4717
123 Ga0316584_0055422 3300036712 Bacteria 2968
124 Ga0316584_0095804 3300036712 Bacteria 2221
125 Ga0316581_0000131 3300037588 Bacteria 11079
126 Ga0316581_0009097 3300037588 Bacteria 2723
127 Ga0316581_0009850 3300037588 Bacteria 2635
128 Ga0316581_0029651 3300037588 Bacteria 1644
129 Ga0400484_45247 3300038725 Bacteria 9792
130 Ga0400490_15859 3300038726 Bacteria 7504
131 Ga0400489_78388 3300039093 Bacteria 40896
132 Ga0451577_0000897 3300042876 Bacteria 44122
133 Ga0451577_0047886 3300042876 Bacteria 3820
134 Ga0451577_0097415 3300042876 Bacteria 2627
135 Ga0451577_0127712 3300042876 Bacteria 2279
136 Ga0451577_0229702 3300042876 Bacteria 1678
137 Ga0451577_0359564 3300042876 Bacteria 1320
138 Ga0451577_0372784 3300042876 Bacteria 1295
139 Ga0453683_0000682 3300044673 Bacteria 35947
140 Ga0453683_0002565 3300044673 Bacteria 14005
141 Ga0453683_0002728 3300044673 Bacteria 13476
142 Ga0453683_0010025 3300044673 Bacteria 6301
143 Ga0453684_0000164 3300044712 Bacteria 296093
144 Ga0453684_0000240 3300044712 Bacteria 235672
145 Ga0453684_0000249 3300044712 Bacteria 232232
146 Ga0453684_0000520 3300044712 Bacteria 147265
147 Ga0453684_0000962 3300044712 Bacteria 94884
148 Ga0453684_0001379 3300044712 Bacteria 70338
149 Ga0453684_0001447 3300044712 Bacteria 67554
150 Ga0453684_0002759 3300044712 Bacteria 41579
151 Ga0453684_0009688 3300044712 Bacteria 16769
152 Ga0453684_0016233 3300044712 Bacteria 11666
153 Ga0453684_0017435 3300044712 Bacteria 11124
154 Ga0453684_0020504 3300044712 Bacteria 9964
155 Ga0453684_0025366 3300044712 Bacteria 8610
156 Ga0453684_0033709 3300044712 Bacteria 7130
157 Ga0453684_0039225 3300044712 Bacteria 6458
158 Ga0453684_0056376 3300044712 Bacteria 5097
159 Ga0453684_0075608 3300044712 Bacteria 4232
160 Ga0453684_0078697 3300044712 Bacteria 4125
161 Ga0453684_0103579 3300044712 Bacteria 3477
162 Ga0453684_0107540 3300044712 Bacteria 3396
163 Ga0453684_0141637 3300044712 Bacteria 2870
164 Ga0453684_0169786 3300044712 Bacteria 2572
165 Ga0453684_0299962 3300044712 Bacteria 1826
166 Ga0453684_0348315 3300044712 Bacteria 1671
167 Ga0453684_0400591 3300044712 Bacteria 1537
168 Ga0453684_0723141 3300044712 Bacteria 1080
169 Ga0451576_0000322 3300045051 Bacteria 116299
170 Ga0451576_0008201 3300045051 Bacteria 12296
171 Ga0451576_0014966 3300045051 Bacteria 8616
172 Ga0451576_0023466 3300045051 Bacteria 6678
173 Ga0451576_0034040 3300045051 Bacteria 5413
174 Ga0451576_0041942 3300045051 Bacteria 4833
175 Ga0451576_0082706 3300045051 Bacteria 3339
176 Ga0451576_0170882 3300045051 Bacteria 2269
177 Ga0451576_0184950 3300045051 Bacteria 2176
178 Ga0451576_0403300 3300045051 Bacteria 1434
179 Ga0451576_0416004 3300045051 Bacteria 1410
180 Ga0501039_0085373 3300049575 Bacteria 2459
181 Ga0501075_0063369 3300049591 Bacteria 2786
182 Ga0501076_0025480 3300049592 Bacteria 4577
183 Ga0501076_0179048 3300049592 Bacteria 1728
184 Ga0501079_0030869 3300049741 Bacteria 4118
185 Ga0501081_0033971 3300049743 Bacteria 3468
186 Ga0501081_0049681 3300049743 Bacteria 2889
187 nmdc:mga05p37_114515_c1 3300050507 Bacteria 3315
188 nmdc:mga05p37_283_c1 3300050507 Bacteria 51325
189 nmdc:mga05p37_49457_c1 3300050507 Bacteria 5171
190 nmdc:mga05p37_89496_c1 3300050507 Bacteria 3793
191 nmdc:mga09592_28304_c1 3300050508 Bacteria 4655
192 nmdc:mga09592_47208_c1 3300050508 Bacteria 3629
193 nmdc:mga09592_809_c1 3300050508 Bacteria 24169
194 nmdc:mga09592_88777_c1 3300050508 Bacteria 2641
195 nmdc:mga0qj67_196224_c1 3300050509 Bacteria 1640
196 nmdc:mga06r32_119388_c1 3300050510 Bacteria 2600
197 nmdc:mga06r32_8282_c1 3300050510 Bacteria 9359
198 nmdc:mga08y16_101697_c1 3300050511 Bacteria 2992
199 nmdc:mga0n895_374559_c1 3300050512 Bacteria 1441
200 nmdc:mga0a205_73852_c1 3300050515 Bacteria 3295
201 Ga0501082_0080562 3300060353 Bacteria 2810
202 Ga0501082_0298600 3300060353 Bacteria 1403
203 Ga0501082_0313918 3300060353 Bacteria 1365
204 8057633010 8057632132 Bacteria 4726859
205 Ga0453684_0029790
206 SwRhRL3b_contig_667182
207 SwRhRL2b_contig_2290580
208 JGI25406J46586_10021072
209 Ga0065707_10081809
210 Ga0065707_10083479
211 Ga0065707_10154722
212 Ga0065707_10179550
213 Ga0070683_100035336
214 Ga0070689_100149506
215 Ga0070689_100181619
216 Ga0070703_10029819
217 Ga0070681_10099493
218 Ga0070698_100010333
219 Ga0070698_100019427
220 Ga0070699_100000855
221 Ga0070679_100046676
222 Ga0070695_100149324
223 Ga0070696_100010286
224 Ga0068859_100050033
225 Ga0068859_100092881
226 Ga0068864_100187382
227 Ga0068861_100212672
228 Ga0068862_100039048
229 Ga0068862_100130931
230 Ga0081538_10009460
231 Ga0081540_1000081
232 Ga0081539_10001287
233 Ga0081539_10012626
234 Ga0075427_10000638
235 Ga0075428_100041910
236 Ga0075428_100082506
237 Ga0075428_100211782
238 Ga0075430_100155780
239 Ga0075431_100021456
240 Ga0075433_10056716
241 Ga0075433_10262530
242 Ga0075434_100336262
243 Ga0075429_100012559
244 Ga0075429_100013988
245 Ga0075429_100020854
246 Ga0075429_100089092
247 Ga0097620_100050033
248 Ga0097620_100092882
249 Ga0111539_10024640
250 Ga0111539_10362998
251 Ga0114129_10018842
252 Ga0114129_10036573
253 Ga0114129_10040622
254 Ga0114129_10051384
255 Ga0114129_10105917
256 Ga0105243_10035521
257 Ga0105243_10256108
258 Ga0105249_10007850
259 Ga0105249_10104641
260 Ga0207684_10220331
261 Ga0207662_10152804
262 Ga0207652_10037894
263 Ga0207646_10236747
264 Ga0207712_10027615
265 Ga0207712_10117989
266 Ga0207675_100192154
267 Ga0207428_10074517
268 Ga0268265_10303090
269 Ga0268264_10271003
270 Ga0265323_10011150
271 Ga0265323_10019189
272 Ga0265322_10008186
273 Ga0265328_10028454
274 Ga0265320_10009476
275 Ga0265329_10046761
276 Ga0265340_10016139
277 Ga0265331_10071305
278 Ga0265316_10017168
279 Ga0265316_10056508
280 Ga0265316_10058604
281 Ga0307513_10005292
282 Ga0307408_100327236
283 Ga0265313_10052430
284 Ga0316575_10006649
285 Ga0316579_10025877
286 Ga0316579_10034387
287 Ga0265342_10010262
288 Ga0316576_10009720
289 Ga0316576_10009866
290 Ga0316576_10024489
291 Ga0316576_10037886
292 Ga0316576_10042626
293 Ga0316576_10121731
294 Ga0316578_10024785
295 Ga0316578_10029653
296 Ga0316578_10046437
297 Ga0316578_10142275
298 Ga0316577_10002905
299 Ga0316577_10018105
300 Ga0316577_10023632
301 Ga0307413_10036525
302 Ga0307410_10005609
303 Ga0307406_10026146
304 Ga0307406_10189116
305 Ga0307416_100045475
306 Ga0307414_10066539
307 Ga0316583_10012309
308 Ga0316585_10001578
309 Ga0316585_10006708
310 Ga0316585_10018651
311 Ga0316580_10007208
312 Ga0316593_10008653
313 Ga0316592_1017480
314 Ga0316596_1010503
315 Ga0316596_1019516
316 Ga0316574_0020537
317 Ga0316574_0180148
318 Ga0316582_0000152
319 Ga0316582_0004082
320 Ga0316582_0005484
321 Ga0316582_0024106
322 Ga0316582_0044959
323 Ga0316582_0063434
324 Ga0316584_0001061
325 Ga0316584_0008542
326 Ga0316584_0021224
327 Ga0316584_0055422
328 Ga0316584_0095804
329 Ga0316581_0000131
330 Ga0316581_0009097
331 Ga0316581_0009850
332 Ga0316581_0029651
333 Ga0400484_45247
334 Ga0400490_15859
335 Ga0400489_78388
336 Ga0451577_0000897
337 Ga0451577_0047886
338 Ga0451577_0097415
339 Ga0451577_0127712
340 Ga0451577_0229702
341 Ga0451577_0359564
342 Ga0451577_0372784
343 Ga0453683_0000682
344 Ga0453683_0002565
345 Ga0453683_0002728
346 Ga0453683_0010025
347 Ga0453684_0000164
348 Ga0453684_0000240
349 Ga0453684_0000249
350 Ga0453684_0000520
351 Ga0453684_0000962
352 Ga0453684_0001379
353 Ga0453684_0001447
354 Ga0453684_0002759
355 Ga0453684_0009688
356 Ga0453684_0016233
357 Ga0453684_0017435
358 Ga0453684_0020504
359 Ga0453684_0025366
360 Ga0453684_0033709
361 Ga0453684_0039225
362 Ga0453684_0056376
363 Ga0453684_0075608
364 Ga0453684_0078697
365 Ga0453684_0103579
366 Ga0453684_0107540
367 Ga0453684_0141637
368 Ga0453684_0169786
369 Ga0453684_0299962
370 Ga0453684_0348315
371 Ga0453684_0400591
372 Ga0453684_0723141
373 Ga0451576_0000322
374 Ga0451576_0008201
375 Ga0451576_0014966
376 Ga0451576_0023466
377 Ga0451576_0034040
378 Ga0451576_0041942
379 Ga0451576_0082706
380 Ga0451576_0170882
381 Ga0451576_0184950
382 Ga0451576_0403300
383 Ga0451576_0416004
384 Ga0501039_0085373
385 Ga0501075_0063369
386 Ga0501076_0025480
387 Ga0501076_0179048
388 Ga0501079_0030869
389 Ga0501081_0033971
390 Ga0501081_0049681
391 nmdc:mga05p37_114515_c1
392 nmdc:mga05p37_283_c1
393 nmdc:mga05p37_49457_c1
394 nmdc:mga05p37_89496_c1
395 nmdc:mga09592_28304_c1
396 nmdc:mga09592_47208_c1
397 nmdc:mga09592_809_c1
398 nmdc:mga09592_88777_c1
399 nmdc:mga0qj67_196224_c1
400 nmdc:mga06r32_119388_c1
401 nmdc:mga06r32_8282_c1
402 nmdc:mga08y16_101697_c1
403 nmdc:mga0n895_374559_c1
404 nmdc:mga0a205_73852_c1
405 Ga0501082_0080562
406 Ga0501082_0298600
407 Ga0501082_0313918
408 8057633010

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

278

341

0.96

PF00005

ABC_tran

ABC transporter

68

227

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6cvl-assembly1.cif.gz_C crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein 0.9511 7 258
7cha-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with amppnp 0.9463 5 258
4fwi-assembly1.cif.gz_B crystal structure of the nucleotide-binding domain of a dipeptide abc transporter 0.9462 5 328
4fwi-assembly1.cif.gz_B crystal structure of the nucleotide-binding domain of a dipeptide abc transporter 0.9433 5 328
6cvl-assembly1.cif.gz_D crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein 0.9419 7 258
ID Description Score Start End Superfamily
af_P33916_3_268_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9807 5 263 3.40.50.300
af_I6Y482_6_279_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9696 5 262 3.40.50.300
af_Q2G1F8_1_274_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9675 5 270 3.40.50.300
af_P9WQJ5_2_332_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9662 5 323 3.40.50.300
af_P0AAG0_1_323_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9622 5 323 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A0L8EX25-F1-model_v4 deleted 0.9799 5 326
AF-A0A3N5SIR2-F1-model_v4 ABC transporter ATP-binding protein 0.9795 5 294 GO:0005524
GO:0015833
GO:0016887
AF-A0A841DVN4-F1-model_v4 ABC-type glutathione transport system ATPase component 0.9786 6 258 GO:0005524
GO:0016887
AF-A0A1R3X1H6-F1-model_v4 Peptide/nickel transport system ATP-binding protein 0.9764 8 258 GO:0005524
GO:0005886
GO:0016887
AF-A0A537NHN9-F1-model_v4 ABC transporter ATP-binding protein 0.976 5 323 GO:0005524
GO:0005886
GO:0015833
GO:0016887

Map