F312486

General Info

Members Datasets Scaffolds Average Seq Length
204 142 408 320

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10347294|Ga0105248_103472941
Length 342
Sequence MSERRFFLGVDGGGTKTEFVCIDRERKLVATALTGTTYHLQVGLKGAVGLLRQGVSAICGQLNISPDEIEHAFFGLPAFGEDAAIDPQLEAACGQILGHARYACGNDMICGWAGSLGGEDGINLVAGTGSIGYGEREGLTARVGGWGEIFSDEGSAYWIAIQGLNAFTRMSDGRLSPGPLHSAFRNALGLSADLDICARVMGERGMARDGIANLAQIVSDAADKGDAAACHILQQAGLELAEMARALRRTLGFRANEVSLISWSGGVLTKQATVRETLERHLSSSGQFRLIEPRYAPGYGAALNAFRIALRELTPKHLEDRAIKRQESSAGAQRPASDAAME

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
7 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
36 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
61 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
66 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
67 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
68 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
76 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
77 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
78 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
79 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
80 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
83 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
84 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
85 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
86 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
87 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
88 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
89 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
90 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
91 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
92 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
93 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
94 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
95 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
96 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
97 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
98 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
104 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
105 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
118 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
119 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
120 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
121 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
122 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
123 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
128 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
129 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
130 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
131 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
132 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
133 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
134 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
135 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
136 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
137 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
138 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
139 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
140 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
141 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
142 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.57
Metatranscriptomes 0
Isolates 3.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.25
Nodule 0
Rhizoplane 10.29
Rhizosphere 53.43
Stem 0
Stem Tuber 0
Unclassified 8.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10347294 3300009177 Bacteria 1670
2 SwRhRL2b_contig_428645 2162886007 Bacteria 2235
3 JGI24741J21665_1002208 3300001915 Bacteria 5168
4 rootH2_10033674 3300003320 Bacteria 2710
5 rootH1_10021201 3300003323 Bacteria 3415
6 rootH1_10028378 3300003323 Bacteria 8490
7 Ga0055536_1000100 3300003781 Bacteria 74377
8 Ga0055536_1000132 3300003781 Bacteria 63495
9 Ga0055530_10000525 3300003791 Bacteria 33242
10 Ga0055531_10000121 3300003794 Bacteria 87524
11 Ga0055531_10000130 3300003794 Bacteria 85308
12 Ga0065704_10008064 3300005289 Bacteria 3072
13 Ga0070682_100029215 3300005337 Bacteria 3318
14 Ga0070660_100000459 3300005339 Bacteria 27142
15 Ga0068867_100101858 3300005459 Bacteria 2194
16 Ga0068853_100019427 3300005539 Bacteria 5633
17 Ga0070665_100025610 3300005548 Bacteria 5942
18 Ga0070665_100203554 3300005548 Unclassified 1980
19 Ga0068855_100119931 3300005563 Bacteria 3011
20 Ga0068857_100014518 3300005577 Bacteria 6870
21 Ga0068857_100120463 3300005577 Bacteria 2362
22 Ga0068859_100162306 3300005617 Unclassified 2314
23 Ga0068864_100452372 3300005618 Unclassified 1228
24 Ga0068858_100005639 3300005842 Bacteria 12244
25 Ga0068860_100002826 3300005843 Bacteria 18060
26 Ga0068862_100028894 3300005844 Unclassified 4671
27 Ga0097620_100162311 3300006931 Unclassified 2314
28 Ga0099795_10000001 3300007788 Bacteria 179944
29 Ga0105240_10000630 3300009093 Bacteria 65019
30 Ga0105240_10003693 3300009093 Bacteria 23672
31 Ga0105240_10070564 3300009093 Unclassified 4321
32 Ga0105243_10228306 3300009148 Bacteria 1650
33 Ga0105237_10001230 3300009545 Bacteria 34130
34 Ga0105237_10075723 3300009545 Bacteria 3356
35 Ga0105237_10146280 3300009545 Bacteria 2358
36 Ga0105249_10115727 3300009553 Bacteria 2541
37 Ga0099796_10000089 3300010159 Bacteria 15213
38 Ga0105239_10000633 3300010375 Bacteria 50164
39 Ga0105239_10018298 3300010375 Bacteria 7745
40 Ga0105246_10068236 3300011119 Bacteria 2494
41 Ga0157369_10039656 3300013105 Bacteria 5146
42 Ga0157374_10150592 3300013296 Unclassified 2262
43 Ga0163162_10229248 3300013306 Bacteria 1988
44 Ga0163163_10326910 3300014325 Unclassified 1587
45 Ga0209233_1013987 3300025261 Bacteria 2276
46 Ga0209676_1000031 3300025292 Bacteria 478976
47 Ga0209676_1000150 3300025292 Bacteria 167474
48 Ga0209050_1000135 3300025298 Bacteria 184020
49 Ga0209050_1000154 3300025298 Bacteria 159160
50 Ga0209050_1000249 3300025298 Bacteria 116136
51 Ga0209050_1029211 3300025298 Bacteria 1770
52 Ga0209256_1001568 3300025299 Bacteria 22481
53 Ga0209051_1003651 3300025303 Bacteria 9966
54 Ga0209257_1000050 3300025304 Bacteria 439325
55 Ga0207656_10114078 3300025321 Bacteria 1252
56 Ga0207695_10001494 3300025913 Bacteria 39002
57 Ga0207695_10040162 3300025913 Bacteria 5021
58 Ga0207671_10002399 3300025914 Bacteria 20094
59 Ga0207671_10040629 3300025914 Bacteria 3442
60 Ga0207671_10131959 3300025914 Bacteria 1918
61 Ga0207657_10000253 3300025919 Bacteria 56919
62 Ga0207694_10093549 3300025924 Bacteria 2374
63 Ga0207644_10146275 3300025931 Unclassified 1825
64 Ga0207709_10040201 3300025935 Bacteria 2798
65 Ga0207711_10332848 3300025941 Bacteria 1404
66 Ga0207712_10370568 3300025961 Unclassified 1196
67 Ga0207658_10334553 3300025986 Bacteria 1314
68 Ga0207703_10002148 3300026035 Bacteria 17332
69 Ga0207639_10013977 3300026041 Bacteria 5633
70 Ga0207641_10000880 3300026088 Bacteria 31415
71 Ga0207674_10006322 3300026116 Bacteria 13961
72 Ga0207674_10130484 3300026116 Bacteria 2477
73 Ga0209179_1000015 3300027512 Bacteria 50401
74 Ga0268266_10044415 3300028379 Bacteria 3798
75 Ga0268266_10092449 3300028379 Bacteria 2654
76 Ga0268265_10039393 3300028380 Bacteria 3484
77 Ga0268264_10000100 3300028381 Bacteria 227852
78 Ga0307515_10047792 3300028794 Bacteria 6492
79 Ga0307511_10147662 3300030521 Bacteria 1360
80 Ga0265328_10017547 3300031239 Bacteria 2772
81 Ga0265325_10000412 3300031241 Bacteria 30489
82 Ga0265339_10004574 3300031249 Bacteria 9421
83 Ga0307513_10015434 3300031456 Bacteria 9258
84 Ga0307513_10077624 3300031456 Bacteria 3438
85 Ga0307513_10119782 3300031456 Bacteria 2603
86 Ga0265314_10000565 3300031711 Bacteria 47145
87 Ga0265342_10003331 3300031712 Bacteria 13263
88 Ga0307413_10029928 3300031824 Bacteria 3053
89 Ga0307412_10008987 3300031911 Bacteria 5725
90 Ga0307414_10016046 3300032004 Bacteria 4541
91 Ga0307411_10070624 3300032005 Bacteria 2364
92 Ga0307510_10000001 3300033180 Bacteria 1172244
93 Ga0307510_10006124 3300033180 Bacteria 14334
94 Ga0395900_0003323 3300037418 Bacteria 17387
95 Ga0395905_0200955 3300037471 Bacteria 1868
96 Ga0395901_0001307 3300038443 Bacteria 26259
97 Ga0436361_1167053 3300039447 Bacteria 3664
98 Ga0439460_0022083 3300042461 Bacteria 1743
99 Ga0451577_0015391 3300042876 Bacteria 7117
100 Ga0451577_0032865 3300042876 Bacteria 4676
101 Ga0439440_0070723 3300042993 Bacteria 908
102 Ga0453683_0105506 3300044673 Bacteria 1770
103 Ga0453684_0045998 3300044712 Bacteria 5813
104 Ga0453684_0222803 3300044712 Bacteria 2183
105 Ga0466967_0011924 3300045976 Bacteria 6620
106 Ga0495638_0000943 3300046460 Bacteria 29505
107 Ga0495638_0010195 3300046460 Bacteria 6542
108 Ga0495650_0000007 3300046471 Bacteria 718072
109 Ga0495650_0002933 3300046471 Bacteria 12936
110 Ga0495610_0000024 3300046512 Bacteria 304748
111 Ga0495616_0000061 3300046513 Bacteria 97964
112 Ga0495632_0012785 3300046519 Bacteria 4818
113 Ga0495637_0003517 3300046520 Bacteria 8306
114 Ga0495643_0030106 3300046522 Bacteria 3033
115 Ga0495648_0001499 3300046524 Bacteria 22847
116 Ga0495654_0000053 3300046530 Bacteria 145014
117 Ga0495609_0046206 3300046538 Bacteria 1950
118 Ga0495668_0027820 3300046616 Bacteria 3202
119 Ga0495668_0058883 3300046616 Bacteria 2120
120 Ga0495625_0000081 3300046660 Bacteria 156254
121 Ga0495625_0023385 3300046660 Bacteria 4720
122 Ga0495625_0076398 3300046660 Bacteria 2342
123 Ga0495672_0000183 3300047320 Bacteria 91129
124 Ga0495683_0053239 3300047323 Bacteria 2019
125 Ga0495687_000055 3300047443 Bacteria 194477
126 Ga0495673_0001086 3300047469 Bacteria 23742
127 Ga0495673_0001227 3300047469 Bacteria 21242
128 Ga0495681_0000940 3300047470 Bacteria 22441
129 Ga0495681_0115219 3300047470 Bacteria 1159
130 Ga0495686_0000161 3300047472 Bacteria 126951
131 Ga0495686_0000849 3300047472 Bacteria 39236
132 Ga0496100_0046403 3300048903 Bacteria 2793
133 Ga0496101_0019538 3300048904 Bacteria 4626
134 Ga0496101_0300425 3300048904 Bacteria 1257
135 Ga0496102_0014154 3300048905 Bacteria 6930
136 Ga0496102_0024954 3300048905 Bacteria 5318
137 Ga0496103_0132551 3300048906 Unclassified 1592
138 Ga0496104_0103576 3300048907 Bacteria 2726
139 Ga0496105_0185547 3300048908 Unclassified 1702
140 Ga0496106_0004012 3300048909 Bacteria 11002
141 Ga0496106_0022688 3300048909 Bacteria 4664
142 Ga0496107_0000033 3300048910 Bacteria 94532
143 Ga0496108_0015277 3300048911 Bacteria 6265
144 Ga0496109_0003421 3300048912 Bacteria 13266
145 Ga0496110_0000307 3300048913 Bacteria 32320
146 Ga0496111_0000405 3300048914 Bacteria 21591
147 Ga0496111_0077132 3300048914 Unclassified 2429
148 Ga0496112_0030531 3300048915 Bacteria 5216
149 Ga0496113_0010229 3300048916 Bacteria 6194
150 Ga0496114_0299903 3300048917 Unclassified 1419
151 Ga0496117_0000035 3300048920 Bacteria 326449
152 Ga0496117_0022990 3300048920 Bacteria 4985
153 Ga0496117_0067217 3300048920 Bacteria 2427
154 Ga0496117_0082178 3300048920 Bacteria 2111
155 Ga0496118_0000038 3300048921 Bacteria 315464
156 Ga0496118_0011106 3300048921 Bacteria 8836
157 Ga0496118_0031741 3300048921 Bacteria 4371
158 Ga0496119_0002918 3300048922 Bacteria 18242
159 Ga0496119_0005478 3300048922 Bacteria 12140
160 Ga0496119_0087214 3300048922 Bacteria 1782
161 Ga0496119_0138911 3300048922 Unclassified 1314
162 Ga0496120_0000086 3300048923 Bacteria 154099
163 Ga0496120_0005233 3300048923 Bacteria 10427
164 Ga0496121_0000021 3300048924 Bacteria 478544
165 Ga0496121_0000078 3300048924 Bacteria 233455
166 Ga0496121_0000259 3300048924 Bacteria 110676
167 Ga0496121_0000529 3300048924 Bacteria 72533
168 Ga0496121_0001819 3300048924 Bacteria 34405
169 Ga0496121_0006647 3300048924 Bacteria 14236
170 Ga0496121_0059399 3300048924 Bacteria 3153
171 Ga0496121_0220446 3300048924 Unclassified 1336
172 Ga0496122_0073030 3300048925 Bacteria 2435
173 Ga0496123_0013915 3300048926 Bacteria 6702
174 Ga0496123_0032162 3300048926 Bacteria 3804
175 Ga0496123_0043028 3300048926 Bacteria 3108
176 Ga0496124_0000110 3300048927 Bacteria 166321
177 Ga0496124_0003134 3300048927 Bacteria 20487
178 Ga0496124_0126217 3300048927 Bacteria 2038
179 Ga0496125_0042533 3300048928 Bacteria 3867
180 Ga0496125_0061800 3300048928 Bacteria 3001
181 Ga0496125_0065571 3300048928 Bacteria 2875
182 Ga0496126_0024110 3300048929 Bacteria 5877
183 Ga0496126_0205901 3300048929 Unclassified 1658
184 Ga0496126_0226206 3300048929 Bacteria 1569
185 Ga0496126_0253516 3300048929 Unclassified 1465
186 Ga0501043_0063905 3300049579 Bacteria 2890
187 Ga0501044_0009263 3300049823 Bacteria 10755
188 Ga0500644_0000353 3300053088 Bacteria 22757
189 Ga0500556_0002259 3300053104 Bacteria 6376
190 Ga0500626_042702 3300053128 Bacteria 2049
191 Ga0500559_0002096 3300053136 Bacteria 10630
192 Ga0500564_000122 3300053138 Bacteria 19631
193 Ga0500616_0000279 3300053153 Bacteria 75756
194 Ga0500645_000253 3300053730 Bacteria 39351
195 Ga0500645_005245 3300053730 Bacteria 4813
196 Ga0500609_000041 3300053731 Bacteria 17191
197 Ga0500596_001550 3300053735 Bacteria 4655
198 2524612592 2524023250 Bacteria 5457705
199 2600201446 2599185354 Bacteria 4398675
200 2600228879 2599185359 Bacteria 4772316
201 2753765623 2751185897 Bacteria 5322941
202 2819716575 2818991466 Bacteria 4748179
203 2928968868 2928968154 Bacteria 4633371
204 8057102339 8057101203 Bacteria 5034064
205 Ga0105248_10347294
206 SwRhRL2b_contig_428645
207 JGI24741J21665_1002208
208 rootH2_10033674
209 rootH1_10021201
210 rootH1_10028378
211 Ga0055536_1000100
212 Ga0055536_1000132
213 Ga0055530_10000525
214 Ga0055531_10000121
215 Ga0055531_10000130
216 Ga0065704_10008064
217 Ga0070682_100029215
218 Ga0070660_100000459
219 Ga0068867_100101858
220 Ga0068853_100019427
221 Ga0070665_100025610
222 Ga0070665_100203554
223 Ga0068855_100119931
224 Ga0068857_100014518
225 Ga0068857_100120463
226 Ga0068859_100162306
227 Ga0068864_100452372
228 Ga0068858_100005639
229 Ga0068860_100002826
230 Ga0068862_100028894
231 Ga0097620_100162311
232 Ga0099795_10000001
233 Ga0105240_10000630
234 Ga0105240_10003693
235 Ga0105240_10070564
236 Ga0105243_10228306
237 Ga0105237_10001230
238 Ga0105237_10075723
239 Ga0105237_10146280
240 Ga0105249_10115727
241 Ga0099796_10000089
242 Ga0105239_10000633
243 Ga0105239_10018298
244 Ga0105246_10068236
245 Ga0157369_10039656
246 Ga0157374_10150592
247 Ga0163162_10229248
248 Ga0163163_10326910
249 Ga0209233_1013987
250 Ga0209676_1000031
251 Ga0209676_1000150
252 Ga0209050_1000135
253 Ga0209050_1000154
254 Ga0209050_1000249
255 Ga0209050_1029211
256 Ga0209256_1001568
257 Ga0209051_1003651
258 Ga0209257_1000050
259 Ga0207656_10114078
260 Ga0207695_10001494
261 Ga0207695_10040162
262 Ga0207671_10002399
263 Ga0207671_10040629
264 Ga0207671_10131959
265 Ga0207657_10000253
266 Ga0207694_10093549
267 Ga0207644_10146275
268 Ga0207709_10040201
269 Ga0207711_10332848
270 Ga0207712_10370568
271 Ga0207658_10334553
272 Ga0207703_10002148
273 Ga0207639_10013977
274 Ga0207641_10000880
275 Ga0207674_10006322
276 Ga0207674_10130484
277 Ga0209179_1000015
278 Ga0268266_10044415
279 Ga0268266_10092449
280 Ga0268265_10039393
281 Ga0268264_10000100
282 Ga0307515_10047792
283 Ga0307511_10147662
284 Ga0265328_10017547
285 Ga0265325_10000412
286 Ga0265339_10004574
287 Ga0307513_10015434
288 Ga0307513_10077624
289 Ga0307513_10119782
290 Ga0265314_10000565
291 Ga0265342_10003331
292 Ga0307413_10029928
293 Ga0307412_10008987
294 Ga0307414_10016046
295 Ga0307411_10070624
296 Ga0307510_10000001
297 Ga0307510_10006124
298 Ga0395900_0003323
299 Ga0395905_0200955
300 Ga0395901_0001307
301 Ga0436361_1167053
302 Ga0439460_0022083
303 Ga0451577_0015391
304 Ga0451577_0032865
305 Ga0439440_0070723
306 Ga0453683_0105506
307 Ga0453684_0045998
308 Ga0453684_0222803
309 Ga0466967_0011924
310 Ga0495638_0000943
311 Ga0495638_0010195
312 Ga0495650_0000007
313 Ga0495650_0002933
314 Ga0495610_0000024
315 Ga0495616_0000061
316 Ga0495632_0012785
317 Ga0495637_0003517
318 Ga0495643_0030106
319 Ga0495648_0001499
320 Ga0495654_0000053
321 Ga0495609_0046206
322 Ga0495668_0027820
323 Ga0495668_0058883
324 Ga0495625_0000081
325 Ga0495625_0023385
326 Ga0495625_0076398
327 Ga0495672_0000183
328 Ga0495683_0053239
329 Ga0495687_000055
330 Ga0495673_0001086
331 Ga0495673_0001227
332 Ga0495681_0000940
333 Ga0495681_0115219
334 Ga0495686_0000161
335 Ga0495686_0000849
336 Ga0496100_0046403
337 Ga0496101_0019538
338 Ga0496101_0300425
339 Ga0496102_0014154
340 Ga0496102_0024954
341 Ga0496103_0132551
342 Ga0496104_0103576
343 Ga0496105_0185547
344 Ga0496106_0004012
345 Ga0496106_0022688
346 Ga0496107_0000033
347 Ga0496108_0015277
348 Ga0496109_0003421
349 Ga0496110_0000307
350 Ga0496111_0000405
351 Ga0496111_0077132
352 Ga0496112_0030531
353 Ga0496113_0010229
354 Ga0496114_0299903
355 Ga0496117_0000035
356 Ga0496117_0022990
357 Ga0496117_0067217
358 Ga0496117_0082178
359 Ga0496118_0000038
360 Ga0496118_0011106
361 Ga0496118_0031741
362 Ga0496119_0002918
363 Ga0496119_0005478
364 Ga0496119_0087214
365 Ga0496119_0138911
366 Ga0496120_0000086
367 Ga0496120_0005233
368 Ga0496121_0000021
369 Ga0496121_0000078
370 Ga0496121_0000259
371 Ga0496121_0000529
372 Ga0496121_0001819
373 Ga0496121_0006647
374 Ga0496121_0059399
375 Ga0496121_0220446
376 Ga0496122_0073030
377 Ga0496123_0013915
378 Ga0496123_0032162
379 Ga0496123_0043028
380 Ga0496124_0000110
381 Ga0496124_0003134
382 Ga0496124_0126217
383 Ga0496125_0042533
384 Ga0496125_0061800
385 Ga0496125_0065571
386 Ga0496126_0024110
387 Ga0496126_0205901
388 Ga0496126_0226206
389 Ga0496126_0253516
390 Ga0501043_0063905
391 Ga0501044_0009263
392 Ga0500644_0000353
393 Ga0500556_0002259
394 Ga0500626_042702
395 Ga0500559_0002096
396 Ga0500564_000122
397 Ga0500616_0000279
398 Ga0500645_000253
399 Ga0500645_005245
400 Ga0500609_000041
401 Ga0500596_001550
402 2524612592
403 2600201446
404 2600228879
405 2753765623
406 2819716575
407 2928968868
408 8057102339

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01869

BcrAD_BadFG

BadF/BadG/BcrA/BcrD ATPase family

8

305

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xht-assembly1.cif.gz_A structure of the ogeuiscb-omega rna-target dna complex 0.8782 1 32
8ctl-assembly1.cif.gz_D iscb and wrna bound to target dna (locked state) 0.85 1 30
8csz-assembly1.cif.gz_D iscb and wrna bound to target dna 0.839 1 30
3ezw-assembly1.cif.gz_B crystal structure of a hyperactive escherichia coli glycerol kinase mutant gly230 --> asp obtained using microfluidic crystallization devices 0.7909 1 75
1zc6-assembly1.cif.gz_A crystal structure of putative n-acetylglucosamine kinase from chromobacterium violaceum. northeast structural genomics target cvr23. 0.7788 1 301
ID Description Score Start End Superfamily
af_Q54PM7_128_294_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9268 120 282 3.30.420.40
af_Q54PM7_128_317_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9243 120 291 3.30.420.40
2e2nA02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9127 117 289 3.30.420.40
af_Q54PM7_128_294_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9006 120 282 3.30.420.40
2e2nA02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8924 117 289 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A2J6X4H2-F1-model_v4 ATPase BadF/BadG/BcrA/BcrD type domain-containing protein 0.9556 4 83
AF-A0A1S2N7Y6-F1-model_v4 BadF/BadG/BcrA/BcrD ATPase family protein 0.9438 7 315
AF-A0A422QQA3-F1-model_v4 N-acetylglucosamine kinase 0.9431 7 315 GO:0016301
AF-A0A560F0W7-F1-model_v4 N-acetylglucosamine kinase-like BadF-type ATPase 0.942 28 315 GO:0016301
AF-A0A4Q3KDW6-F1-model_v4 deleted 0.9389 142 292

Map