F302171

General Info

Members Datasets Scaffolds Average Seq Length
196 146 392 570

Family's Representative Sequence

Representative Sequence 3300049591|Ga0501075_0012707|Ga0501075_0012707_4105_5943
Length 612
Sequence MSTALQKRWVVKQADSQSVLRQAEQLAISPLLARILILRGFTDEHAARRYLSSTLRADLPSPFEMAGMEPAVRRLVEAIRNQEQIAIWGDYDVDGTTGASVLVSFLREIGAEPIYYVPHRIEEGYGLNVDGLRRLRARGVSLVVTVDCGISNAEEVRAASEMGLELVVVDHHQPPDELPPAVAVINPYRKDCLFPDKGLCAAGLAFYLVIGLRARLRDEGWFERSANPDIRRYLDIVTLGTIADMVPLRGVNRTLIRRGLSQLGVSTRPGVVALKQVSNIPAGDVSAGQVGFRLGPRINAAGRVDYGIKVVELLTTDSPDVALRIALELDAHNSERRAIEAVVLEQAMTQAAIAMESGARYSLVLAGADWHPGVLGIVASRIVEKYYRPTVVIALNGGAGKGSARSIRGFHMVEGFRRCAAHLEKFGGHEYAGGLSINADRLELFAESFETCARQALSQEDLLPLLEMDGQLNFPEIGLALARELDVLKPFGVGNPEPLFITLGAEVCERKVFSAGVRYRLRQASRVLGAVSFGVGDDFPGRVGESIDVAYRLSKNQWNGATSVELKIVDVRPAGTVESSSPVVSNDHSGHARGGSERLSRLANPDVAPRRG

Samples

Sample ID Description Type Environment
1 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
85 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
86 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
87 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
88 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
94 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
95 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
96 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
97 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
98 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
99 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
100 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
104 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
105 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
106 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
107 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
108 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
112 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
113 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
144 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
145 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
146 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.51
Rhizosphere 95.41
Stem 0
Stem Tuber 0
Unclassified 16.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501075_0012707 3300049591 Bacteria 5991
2 JGI25406J46586_10000001 3300003203 Bacteria 251772
3 Ga0065712_10000887 3300005290 Bacteria 10159
4 Ga0065712_10004383 3300005290 Bacteria 3260
5 Ga0065712_10073958 3300005290 Bacteria 4225
6 Ga0065715_10104051 3300005293 Bacteria 2982
7 Ga0065707_10000867 3300005295 Bacteria 13298
8 Ga0070683_100049618 3300005329 Unclassified 3883
9 Ga0070670_100002736 3300005331 Bacteria 14563
10 Ga0068869_100090611 3300005334 Unclassified 2299
11 Ga0070680_100010332 3300005336 Bacteria 7198
12 Ga0068868_100022251 3300005338 Unclassified 4782
13 Ga0070660_100012822 3300005339 Bacteria 5994
14 Ga0070689_100010388 3300005340 Bacteria 6635
15 Ga0070661_100015989 3300005344 Bacteria 5297
16 Ga0070669_100006283 3300005353 Bacteria 8567
17 Ga0070671_100028834 3300005355 Unclassified 4574
18 Ga0070667_100036124 3300005367 Unclassified 4142
19 Ga0070714_100189035 3300005435 Bacteria 1878
20 Ga0070711_100134730 3300005439 Unclassified 1844
21 Ga0070708_100065345 3300005445 Bacteria 3262
22 Ga0070708_100118217 3300005445 Unclassified 2442
23 Ga0070663_100016514 3300005455 Bacteria 4798
24 Ga0070681_10007476 3300005458 Bacteria 10677
25 Ga0070707_100000292 3300005468 Bacteria 49172
26 Ga0070707_100008821 3300005468 Bacteria 9352
27 Ga0070707_100021189 3300005468 Bacteria 6142
28 Ga0070698_100010730 3300005471 Bacteria 9752
29 Ga0070699_100078083 3300005518 Bacteria 2883
30 Ga0070679_100029330 3300005530 Bacteria 5428
31 Ga0070697_100002355 3300005536 Bacteria 14531
32 Ga0070697_100004815 3300005536 Bacteria 10345
33 Ga0070697_100127222 3300005536 Bacteria 2135
34 Ga0070686_100024207 3300005544 Unclassified 3638
35 Ga0070696_100017047 3300005546 Bacteria 4900
36 Ga0070704_100037232 3300005549 Unclassified 3321
37 Ga0070704_100037893 3300005549 Bacteria 3298
38 Ga0068855_100020285 3300005563 Bacteria 7976
39 Ga0070664_100015065 3300005564 Bacteria 6313
40 Ga0068854_100043764 3300005578 Unclassified 3175
41 Ga0068860_100003425 3300005843 Bacteria 16312
42 Ga0081455_10000567 3300005937 Bacteria 48149
43 Ga0081455_10017088 3300005937 Bacteria 6971
44 Ga0081538_10010087 3300005981 Bacteria 7779
45 Ga0081539_10000014 3300005985 Bacteria 411270
46 Ga0081539_10007674 3300005985 Bacteria 9699
47 Ga0070717_10011013 3300006028 Bacteria 6849
48 Ga0075428_100007773 3300006844 Bacteria 11884
49 Ga0075428_100100916 3300006844 Bacteria 3146
50 Ga0075430_100010751 3300006846 Bacteria 7756
51 Ga0075431_100003488 3300006847 Bacteria 15246
52 Ga0075431_100026285 3300006847 Bacteria 5971
53 Ga0075433_10001239 3300006852 Bacteria 18627
54 Ga0075433_10004973 3300006852 Bacteria 10406
55 Ga0075433_10015142 3300006852 Bacteria 6319
56 Ga0075433_10036126 3300006852 Bacteria 4254
57 Ga0075434_100011655 3300006871 Bacteria 8303
58 Ga0075434_100022112 3300006871 Bacteria 6193
59 Ga0075434_100039207 3300006871 Bacteria 4694
60 Ga0075434_100047125 3300006871 Bacteria 4278
61 Ga0075434_100073393 3300006871 Unclassified 3414
62 Ga0075434_100189534 3300006871 Unclassified 2077
63 Ga0075429_100085433 3300006880 Unclassified 2750
64 Ga0075436_100018942 3300006914 Bacteria 4714
65 Ga0075435_100028958 3300007076 Unclassified 4347
66 Ga0075435_100039013 3300007076 Unclassified 3789
67 Ga0075435_100059909 3300007076 Bacteria 3086
68 Ga0075435_100061147 3300007076 Bacteria 3055
69 Ga0105240_10264782 3300009093 Unclassified 1982
70 Ga0114129_10024606 3300009147 Bacteria 8532
71 Ga0114129_10112829 3300009147 Unclassified 3749
72 Ga0114129_10209017 3300009147 Bacteria 2639
73 Ga0105242_10021170 3300009176 Bacteria 5104
74 Ga0105249_10073809 3300009553 Bacteria 3156
75 Ga0105239_10009462 3300010375 Bacteria 10980
76 Ga0105246_10006546 3300011119 Bacteria 7112
77 Ga0157371_10022422 3300013102 Unclassified 4627
78 Ga0157374_10011408 3300013296 Bacteria 7691
79 Ga0157374_10014463 3300013296 Bacteria 6906
80 Ga0157374_10132431 3300013296 Bacteria 2414
81 Ga0157378_10014155 3300013297 Bacteria 6981
82 Ga0157378_10018626 3300013297 Bacteria 6104
83 Ga0163162_10030520 3300013306 Bacteria 5341
84 Ga0207688_10004184 3300025901 Bacteria 7864
85 Ga0207645_10000955 3300025907 Bacteria 23941
86 Ga0207684_10056886 3300025910 Unclassified 3318
87 Ga0207707_10010649 3300025912 Bacteria 7989
88 Ga0207657_10016299 3300025919 Bacteria 7171
89 Ga0207646_10003177 3300025922 Bacteria 18788
90 Ga0207646_10006093 3300025922 Bacteria 12562
91 Ga0207664_10052002 3300025929 Bacteria 3238
92 Ga0207644_10059290 3300025931 Unclassified 2768
93 Ga0207706_10003847 3300025933 Bacteria 14296
94 Ga0207686_10010491 3300025934 Bacteria 5047
95 Ga0207670_10002058 3300025936 Bacteria 10535
96 Ga0207689_10010804 3300025942 Bacteria 7854
97 Ga0207678_10001585 3300026067 Bacteria 20917
98 Ga0207678_10004705 3300026067 Bacteria 12249
99 Ga0207708_10150912 3300026075 Bacteria 1829
100 Ga0207674_10049758 3300026116 Unclassified 4284
101 Ga0207683_10001050 3300026121 Bacteria 25175
102 Ga0209974_10005752 3300027876 Bacteria 4348
103 Ga0268264_10000528 3300028381 Bacteria 48425
104 Ga0307513_10018988 3300031456 Bacteria 8197
105 Ga0307408_100015379 3300031548 Bacteria 5093
106 Ga0307408_100041292 3300031548 Bacteria 3270
107 Ga0307413_10002670 3300031824 Bacteria 7310
108 Ga0307406_10033229 3300031901 Bacteria 3156
109 Ga0307407_10076974 3300031903 Bacteria 2005
110 Ga0307409_100100334 3300031995 Bacteria 2399
111 Ga0307416_100002422 3300032002 Bacteria 10707
112 Ga0307416_100003724 3300032002 Bacteria 9042
113 Ga0307414_10031064 3300032004 Bacteria 3498
114 Ga0307411_10045261 3300032005 Bacteria 2830
115 Ga0307411_10056136 3300032005 Bacteria 2594
116 Ga0307415_100003206 3300032126 Bacteria 8300
117 Ga0307415_100021967 3300032126 Bacteria 3932
118 Ga0373945_0036691 3300035116 Bacteria 1757
119 Ga0373955_0001223 3300035172 Bacteria 10914
120 Ga0373942_0008648 3300035207 Bacteria 2376
121 Ga0373931_0035920 3300035691 Bacteria 2580
122 Ga0373935_0005995 3300035692 Bacteria 7216
123 Ga0373937_0003747 3300036401 Bacteria 12848
124 Ga0373925_0026864 3300037068 Bacteria 4214
125 Ga0395898_0002044 3300037466 Bacteria 25218
126 Ga0395901_0001709 3300038443 Bacteria 22672
127 Ga0400484_31790 3300038725 Bacteria 12996
128 Ga0400490_11168 3300038726 Bacteria 44943
129 Ga0400490_45439 3300038726 Bacteria 3555
130 Ga0400485_11990 3300038735 Bacteria 13227
131 Ga0400486_20766 3300038742 Bacteria 91783
132 Ga0400483_111576 3300039062 Bacteria 8619
133 Ga0400489_63456 3300039093 Bacteria 51868
134 Ga0451577_0111123 3300042876 Unclassified 2452
135 Ga0453683_0002517 3300044673 Bacteria 14143
136 Ga0453684_0076091 3300044712 Bacteria 4215
137 Ga0451576_0022127 3300045051 Bacteria 6898
138 Ga0495603_0076538 3300046455 Unclassified 1964
139 Ga0495651_0002901 3300046462 Bacteria 13279
140 Ga0495580_0003903 3300046472 Bacteria 12600
141 Ga0495594_0062274 3300046499 Bacteria 2066
142 Ga0495608_0066526 3300046511 Bacteria 2359
143 Ga0495618_0042448 3300046514 Bacteria 2867
144 Ga0495630_0068888 3300046517 Bacteria 2661
145 Ga0495634_0151220 3300046642 Unclassified 1468
146 Ga0495635_0023340 3300046663 Unclassified 4312
147 Ga0495647_0029430 3300046681 Unclassified 2031
148 Ga0495684_0008321 3300047471 Bacteria 8039
149 Ga0496113_0101556 3300048916 Unclassified 2230
150 Ga0501033_0004288 3300049570 Bacteria 11462
151 Ga0501034_0021702 3300049571 Bacteria 6542
152 Ga0501036_0036508 3300049572 Bacteria 4159
153 Ga0501037_0006979 3300049573 Bacteria 8249
154 Ga0501039_0008162 3300049575 Bacteria 7979
155 Ga0501040_0000282 3300049576 Bacteria 29680
156 Ga0501040_0031024 3300049576 Unclassified 3612
157 Ga0501043_0068567 3300049579 Bacteria 2785
158 Ga0501046_0001936 3300049580 Bacteria 19648
159 Ga0501046_0003904 3300049580 Bacteria 13639
160 Ga0501048_0001264 3300049582 Bacteria 19126
161 Ga0501069_0005458 3300049585 Bacteria 6611
162 Ga0501071_0001219 3300049587 Bacteria 14525
163 Ga0501071_0016569 3300049587 Bacteria 5071
164 Ga0501072_0000077 3300049588 Bacteria 71949
165 Ga0501073_0014940 3300049589 Bacteria 5633
166 Ga0501073_0039133 3300049589 Bacteria 3361
167 Ga0501074_0002619 3300049590 Bacteria 12592
168 Ga0501075_0000039 3300049591 Bacteria 52266
169 Ga0501075_0016924 3300049591 Bacteria 5257
170 Ga0501077_0088506 3300049593 Unclassified 1962
171 Ga0501080_0008698 3300049742 Bacteria 9216
172 Ga0501081_0000274 3300049743 Bacteria 27173
173 Ga0501081_0012253 3300049743 Bacteria 5627
174 Ga0501083_0003027 3300049744 Bacteria 11678
175 Ga0501035_0019974 3300049822 Bacteria 6154
176 Ga0501044_0028841 3300049823 Bacteria 5854
177 Ga0501045_0000158 3300049824 Bacteria 36829
178 nmdc:mga05p37_226035_c1 3300050507 Bacteria 2257
179 nmdc:mga05p37_76411_c1 3300050507 Unclassified 4124
180 nmdc:mga0qj67_116114_c1 3300050509 Bacteria 2163
181 nmdc:mga0qj67_39378_c1 3300050509 Bacteria 3711
182 nmdc:mga0qj67_41581_c1 3300050509 Bacteria 3615
183 nmdc:mga06r32_13744_c1 3300050510 Bacteria 7343
184 nmdc:mga0n895_3496_c1 3300050512 Bacteria 12688
185 nmdc:mga0n895_55968_c1 3300050512 Bacteria 3884
186 nmdc:mga0rr50_83155_c1 3300050513 Bacteria 2474
187 nmdc:mga0rr50_86561_c1 3300050513 Unclassified 2431
188 nmdc:mga08x19_40494_c1 3300050514 Bacteria 2965
189 nmdc:mga08x19_47623_c1 3300050514 Unclassified 2744
190 nmdc:mga0a205_1583_c1 3300050515 Bacteria 19517
191 nmdc:mga0a205_18807_c1 3300050515 Bacteria 6502
192 nmdc:mga0a205_76259_c1 3300050515 Unclassified 3240
193 Ga0495619_0110148 3300053085 Bacteria 1881
194 Ga0590071_003137 3300059421 Bacteria 4090
195 Ga0590077_000741 3300059426 Bacteria 8566
196 Ga0501082_0000312 3300060353 Bacteria 43345
197 Ga0501075_0012707
198 JGI25406J46586_10000001
199 Ga0065712_10000887
200 Ga0065712_10004383
201 Ga0065712_10073958
202 Ga0065715_10104051
203 Ga0065707_10000867
204 Ga0070683_100049618
205 Ga0070670_100002736
206 Ga0068869_100090611
207 Ga0070680_100010332
208 Ga0068868_100022251
209 Ga0070660_100012822
210 Ga0070689_100010388
211 Ga0070661_100015989
212 Ga0070669_100006283
213 Ga0070671_100028834
214 Ga0070667_100036124
215 Ga0070714_100189035
216 Ga0070711_100134730
217 Ga0070708_100065345
218 Ga0070708_100118217
219 Ga0070663_100016514
220 Ga0070681_10007476
221 Ga0070707_100000292
222 Ga0070707_100008821
223 Ga0070707_100021189
224 Ga0070698_100010730
225 Ga0070699_100078083
226 Ga0070679_100029330
227 Ga0070697_100002355
228 Ga0070697_100004815
229 Ga0070697_100127222
230 Ga0070686_100024207
231 Ga0070696_100017047
232 Ga0070704_100037232
233 Ga0070704_100037893
234 Ga0068855_100020285
235 Ga0070664_100015065
236 Ga0068854_100043764
237 Ga0068860_100003425
238 Ga0081455_10000567
239 Ga0081455_10017088
240 Ga0081538_10010087
241 Ga0081539_10000014
242 Ga0081539_10007674
243 Ga0070717_10011013
244 Ga0075428_100007773
245 Ga0075428_100100916
246 Ga0075430_100010751
247 Ga0075431_100003488
248 Ga0075431_100026285
249 Ga0075433_10001239
250 Ga0075433_10004973
251 Ga0075433_10015142
252 Ga0075433_10036126
253 Ga0075434_100011655
254 Ga0075434_100022112
255 Ga0075434_100039207
256 Ga0075434_100047125
257 Ga0075434_100073393
258 Ga0075434_100189534
259 Ga0075429_100085433
260 Ga0075436_100018942
261 Ga0075435_100028958
262 Ga0075435_100039013
263 Ga0075435_100059909
264 Ga0075435_100061147
265 Ga0105240_10264782
266 Ga0114129_10024606
267 Ga0114129_10112829
268 Ga0114129_10209017
269 Ga0105242_10021170
270 Ga0105249_10073809
271 Ga0105239_10009462
272 Ga0105246_10006546
273 Ga0157371_10022422
274 Ga0157374_10011408
275 Ga0157374_10014463
276 Ga0157374_10132431
277 Ga0157378_10014155
278 Ga0157378_10018626
279 Ga0163162_10030520
280 Ga0207688_10004184
281 Ga0207645_10000955
282 Ga0207684_10056886
283 Ga0207707_10010649
284 Ga0207657_10016299
285 Ga0207646_10003177
286 Ga0207646_10006093
287 Ga0207664_10052002
288 Ga0207644_10059290
289 Ga0207706_10003847
290 Ga0207686_10010491
291 Ga0207670_10002058
292 Ga0207689_10010804
293 Ga0207678_10001585
294 Ga0207678_10004705
295 Ga0207708_10150912
296 Ga0207674_10049758
297 Ga0207683_10001050
298 Ga0209974_10005752
299 Ga0268264_10000528
300 Ga0307513_10018988
301 Ga0307408_100015379
302 Ga0307408_100041292
303 Ga0307413_10002670
304 Ga0307406_10033229
305 Ga0307407_10076974
306 Ga0307409_100100334
307 Ga0307416_100002422
308 Ga0307416_100003724
309 Ga0307414_10031064
310 Ga0307411_10045261
311 Ga0307411_10056136
312 Ga0307415_100003206
313 Ga0307415_100021967
314 Ga0373945_0036691
315 Ga0373955_0001223
316 Ga0373942_0008648
317 Ga0373931_0035920
318 Ga0373935_0005995
319 Ga0373937_0003747
320 Ga0373925_0026864
321 Ga0395898_0002044
322 Ga0395901_0001709
323 Ga0400484_31790
324 Ga0400490_11168
325 Ga0400490_45439
326 Ga0400485_11990
327 Ga0400486_20766
328 Ga0400483_111576
329 Ga0400489_63456
330 Ga0451577_0111123
331 Ga0453683_0002517
332 Ga0453684_0076091
333 Ga0451576_0022127
334 Ga0495603_0076538
335 Ga0495651_0002901
336 Ga0495580_0003903
337 Ga0495594_0062274
338 Ga0495608_0066526
339 Ga0495618_0042448
340 Ga0495630_0068888
341 Ga0495634_0151220
342 Ga0495635_0023340
343 Ga0495647_0029430
344 Ga0495684_0008321
345 Ga0496113_0101556
346 Ga0501033_0004288
347 Ga0501034_0021702
348 Ga0501036_0036508
349 Ga0501037_0006979
350 Ga0501039_0008162
351 Ga0501040_0000282
352 Ga0501040_0031024
353 Ga0501043_0068567
354 Ga0501046_0001936
355 Ga0501046_0003904
356 Ga0501048_0001264
357 Ga0501069_0005458
358 Ga0501071_0001219
359 Ga0501071_0016569
360 Ga0501072_0000077
361 Ga0501073_0014940
362 Ga0501073_0039133
363 Ga0501074_0002619
364 Ga0501075_0000039
365 Ga0501075_0016924
366 Ga0501077_0088506
367 Ga0501080_0008698
368 Ga0501081_0000274
369 Ga0501081_0012253
370 Ga0501083_0003027
371 Ga0501035_0019974
372 Ga0501044_0028841
373 Ga0501045_0000158
374 nmdc:mga05p37_226035_c1
375 nmdc:mga05p37_76411_c1
376 nmdc:mga0qj67_116114_c1
377 nmdc:mga0qj67_39378_c1
378 nmdc:mga0qj67_41581_c1
379 nmdc:mga06r32_13744_c1
380 nmdc:mga0n895_3496_c1
381 nmdc:mga0n895_55968_c1
382 nmdc:mga0rr50_83155_c1
383 nmdc:mga0rr50_86561_c1
384 nmdc:mga08x19_40494_c1
385 nmdc:mga08x19_47623_c1
386 nmdc:mga0a205_1583_c1
387 nmdc:mga0a205_18807_c1
388 nmdc:mga0a205_76259_c1
389 Ga0495619_0110148
390 Ga0590071_003137
391 Ga0590077_000741
392 Ga0501082_0000312

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17768

RecJ_OB

RecJ OB domain

468

570

0.98

PF02272

DHHA1

DHHA1 domain

329

452

0.93

PF01368

DHH

DHH family

84

241

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zxp-assembly1.cif.gz_A crystal structure of recj in complex with mn2+ from thermus thermophilus hb8 0.8709 4 547
6lrd-assembly1.cif.gz_A structure of recj complexed with a 5'-p-dspacer-modified ssdna 0.8662 1 544
2zxr-assembly1.cif.gz_A crystal structure of recj in complex with mg2+ from thermus thermophilus hb8 0.8627 4 547
5f56-assembly1.cif.gz_A structure of recj complexed with dna and ssb-ct 0.8491 1 544
5f54-assembly1.cif.gz_A structure of recj complexed with dtmp 0.8483 3 545
ID Description Score Start End Superfamily
af_Q2FXT9_57_316_3.90.1640.30 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.9532 56 319 3.90.1640.30
af_Q2FXT9_57_316_3.90.1640.30 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.9461 56 319 3.90.1640.30
2zxrA02 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.9422 61 319 3.90.1640.30
2zxrA03 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; 0.941 323 446 3.10.310.30
af_P21893_50_326_3.90.1640.30 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core); 0.9395 58 319 3.90.1640.30
ID Description Score Start End GO Terms
AF-A0A2V6EY08-F1-model_v4 Single-stranded-DNA-specific exonuclease RecJ 0.9846 35 310 GO:0004527
AF-K1UZQ3-F1-model_v4 Single-stranded-DNA-specific exonuclease RecJ 0.9587 60 201 GO:0004527
AF-A0A382PN99-F1-model_v4 DDH domain-containing protein 0.9565 55 302 GO:0004527
AF-A0A7X6NPA1-F1-model_v4 deleted 0.9533 299 549
AF-A0A388PYR0-F1-model_v4 Single-stranded-DNA-specific exonuclease RecJ 0.9518 29 251 GO:0004527
GO:0016020

Map