F279974
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 182 | 156 | 159 | 508 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2643221573|2643880932 |
| Length | 513 |
| Sequence | DFRILLLNPPHTAIGSRIPREQLPPLGLLSIGGPLIDAGFAVELLDAEFGPLTIDEIVRRVLAAAPDLLMVGHSGSTSAHPTIARIAARLKRERPQLRIVYGGVYPTYHWRDVLEREAAVDIVVRGEGERTATLLAQALARGEDLASVPGLAYRRDDGRILETGQAEMILDLDQCRVGWELIDHDRYSYWGGMKAVVVQFSRGCPYLCSYCGQRGFWSRWRHRDPVKFARELARLHREHGVRLINFADELPTGSRKAWQAFLEALIAENVDLTLVGSTRAGDIVRDADILHLYKRAGVIRFLLGIESYSEATLSKIRKGASVSEDREAIRLLRAHGIISMATYVVGFDEERDRDYWNSLRHLLRYDPDQIQLLYVTPHRWTPYYDSVADRRVIQTDARKWDYKHQVLATTRVPPWRVLLWVKAIEAIVQLRPRALHRSLLHPDREVLKGMRWYVRMGRRVWLRELFEFFFAGGRSRNGPSVEEFWGASLSAQEYALAKPQRRRIPIRSLTPPP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2511231028 | Bradyrhizobium sp. YR681 | Isolate | Rhizosphere |
| 2 | 2513237096 | Bradyrhizobium pachyrhizi USDA 3259 | Isolate | Nodule |
| 3 | 2513237137 | Bradyrhizobium elkanii USDA 94 | Isolate | Nodule |
| 4 | 2513237145 | Bradyrhizobium elkanii USDA 3254 | Isolate | Nodule |
| 5 | 2517572143 | Bradyrhizobium elkanii USDA 76 | Isolate | Nodule |
| 6 | 2643221573 | Lysobacter sp. Root604 | Isolate | Unclassified |
| 7 | 2643221728 | Lysobacter sp. Root983 | Isolate | Unclassified |
| 8 | 2738543031 | Pleomorphomonas sp. CF100 | Isolate | Unclassified |
| 9 | 2739367664 | Novosphingobium sp. GV002 | Isolate | Unclassified |
| 10 | 2739367865 | Novosphingobium sp. GV013 | Isolate | Unclassified |
| 11 | 2811994881 | Pseudomonas sp. SLBN-26 | Isolate | Unclassified |
| 12 | 2816332527 | Bradyrhizobium diazoefficiens Y21 | Isolate | Nodule |
| 13 | 2824704595 | Bradyrhizobium sp. HAMBI 2150 | Isolate | Unclassified |
| 14 | 2824753945 | Bradyrhizobium sp. HAMBI 2128 | Isolate | Unclassified |
| 15 | 2824763712 | Bradyrhizobium sp. HAMBI 2129 | Isolate | Unclassified |
| 16 | 2829745981 | Methylorubrum rhodinum DSM 2163 | Isolate | Rhizosphere |
| 17 | 2888378607 | Bradyrhizobium sp. LCT2 | Isolate | Unclassified |
| 18 | 2903748898 | Bradyrhizobium uaiense UFLA 03-164 | Isolate | Nodule |
| 19 | 2904711408 | Bradyrhizobium sp. USDA 3456 | Isolate | Unclassified |
| 20 | 2906635258 | Bradyrhizobium sp. USDA 3458 | Isolate | Unclassified |
| 21 | 2906660503 | Bradyrhizobium brasilense UFLA 03-321 | Isolate | Unclassified |
| 22 | 2908739725 | Bradyrhizobium sp. UFLA03-84 | Isolate | Nodule |
| 23 | 2923519811 | Pseudomonas otitidis SLBN-103 | Isolate | Rhizosphere |
| 24 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 25 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 26 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 27 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 28 | 3300003659 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 29 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 30 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 31 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 32 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 34 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 37 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 38 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 39 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 40 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 41 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 42 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 43 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 44 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 45 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 46 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 47 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 48 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 49 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 50 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300024225 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 | Metagenome | Rhizosphere |
| 63 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 64 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 67 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 69 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 70 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 71 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 86 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 87 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 88 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 89 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 90 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 91 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 92 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 93 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 94 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 95 | 3300033442 | Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 | Metagenome | Nodule |
| 96 | 3300038705 | Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 | Metagenome | Unclassified |
| 97 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 98 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 99 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 100 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 101 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 102 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 103 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 104 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 105 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 106 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 107 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 108 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 126 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 127 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 128 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 129 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 130 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 131 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 132 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 133 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 134 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 135 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 136 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 137 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 139 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 140 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 144 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 145 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 146 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 147 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 148 | 3300053105 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere | Metagenome | Endosphere |
| 149 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 150 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 151 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 152 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 153 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 154 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 155 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 156 | 3300053727 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.36 |
| Metatranscriptomes | 0 |
| Isolates | 12.64 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 18.68 |
| Nodule | 4.4 |
| Rhizoplane | 4.95 |
| Rhizosphere | 53.3 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 18.68 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10003077 | 3300001979 | Bacteria | 7369 |
| 2 | JGI24739J22299_10003558 | 3300001989 | Bacteria | 5952 |
| 3 | JGI25406J46586_10019861 | 3300003203 | Bacteria | 2729 |
| 4 | JGI25153J46596_10001176 | 3300003215 | Bacteria | 15809 |
| 5 | JGI25153J46596_10003218 | 3300003215 | Bacteria | 9174 |
| 6 | JGI25404J52841_10008485 | 3300003659 | Bacteria | 2188 |
| 7 | Ga0055542_1005145 | 3300003762 | Bacteria | 3012 |
| 8 | Ga0055531_10003436 | 3300003794 | Bacteria | 10103 |
| 9 | Ga0065165_1009808 | 3300005262 | Bacteria | 4232 |
| 10 | Ga0070658_10000320 | 3300005327 | Bacteria | 41089 |
| 11 | Ga0068869_100006588 | 3300005334 | Bacteria | 7370 |
| 12 | Ga0070668_100080188 | 3300005347 | Bacteria | 2557 |
| 13 | Ga0070714_100000875 | 3300005435 | Bacteria | 21382 |
| 14 | Ga0070698_100239158 | 3300005471 | Bacteria | 1749 |
| 15 | Ga0068853_100000085 | 3300005539 | Bacteria | 64736 |
| 16 | Ga0068852_100003652 | 3300005616 | Bacteria | 10777 |
| 17 | Ga0068870_10027531 | 3300005840 | Bacteria | 2844 |
| 18 | Ga0068862_100080754 | 3300005844 | Bacteria | 2820 |
| 19 | Ga0081540_1004208 | 3300005983 | Bacteria | 11060 |
| 20 | Ga0081540_1004781 | 3300005983 | Bacteria | 10210 |
| 21 | Ga0081540_1020930 | 3300005983 | Bacteria | 3916 |
| 22 | Ga0081540_1028304 | 3300005983 | Bacteria | 3151 |
| 23 | Ga0081539_10001563 | 3300005985 | Bacteria | 37979 |
| 24 | Ga0081539_10011587 | 3300005985 | Bacteria | 6949 |
| 25 | Ga0070717_10000921 | 3300006028 | Bacteria | 19578 |
| 26 | Ga0075368_10005901 | 3300006042 | Bacteria | 4242 |
| 27 | Ga0075366_10026941 | 3300006195 | Bacteria | 3369 |
| 28 | Ga0075370_10065515 | 3300006353 | Bacteria | 2072 |
| 29 | Ga0075430_100097375 | 3300006846 | Bacteria | 2458 |
| 30 | Ga0075431_100000391 | 3300006847 | Bacteria | 35210 |
| 31 | Ga0075429_100165986 | 3300006880 | Bacteria | 1934 |
| 32 | Ga0105240_10005155 | 3300009093 | Bacteria | 19542 |
| 33 | Ga0105245_10044764 | 3300009098 | Bacteria | 3951 |
| 34 | Ga0105237_10029071 | 3300009545 | Bacteria | 5622 |
| 35 | Ga0105237_10049327 | 3300009545 | Bacteria | 4232 |
| 36 | Ga0105238_10042674 | 3300009551 | Eukaryota | 4592 |
| 37 | Ga0105239_10108972 | 3300010375 | Bacteria | 3068 |
| 38 | Ga0157370_10004778 | 3300013104 | Bacteria | 15409 |
| 39 | Ga0157369_10108901 | 3300013105 | Bacteria | 2946 |
| 40 | Ga0163162_10077291 | 3300013306 | Bacteria | 3392 |
| 41 | Ga0163162_10265044 | 3300013306 | Bacteria | 1849 |
| 42 | Ga0157375_10086771 | 3300013308 | Bacteria | 3181 |
| 43 | Ga0163163_10000002 | 3300014325 | Bacteria | 609846 |
| 44 | Ga0157380_10042822 | 3300014326 | Bacteria | 3541 |
| 45 | Ga0157379_10078640 | 3300014968 | Bacteria | 2954 |
| 46 | Ga0224572_1012399 | 3300024225 | Bacteria | 1619 |
| 47 | Ga0209026_1002187 | 3300025250 | Bacteria | 7571 |
| 48 | Ga0209148_1000170 | 3300025254 | Bacteria | 132641 |
| 49 | Ga0209455_1001191 | 3300025272 | Bacteria | 12424 |
| 50 | Ga0209564_1012205 | 3300025295 | Bacteria | 3765 |
| 51 | Ga0209758_1000015 | 3300025297 | Bacteria | 851943 |
| 52 | Ga0209256_1010104 | 3300025299 | Bacteria | 4014 |
| 53 | Ga0207426_1016958 | 3300025302 | Bacteria | 2600 |
| 54 | Ga0209257_1000390 | 3300025304 | Bacteria | 87532 |
| 55 | Ga0207643_10012642 | 3300025908 | Bacteria | 4560 |
| 56 | Ga0207705_10001185 | 3300025909 | Bacteria | 21177 |
| 57 | Ga0207695_10000065 | 3300025913 | Bacteria | 336949 |
| 58 | Ga0207671_10093173 | 3300025914 | Bacteria | 2272 |
| 59 | Ga0207681_10034904 | 3300025923 | Bacteria | 3311 |
| 60 | Ga0207659_10020018 | 3300025926 | Bacteria | 4416 |
| 61 | Ga0207664_10000749 | 3300025929 | Bacteria | 22081 |
| 62 | Ga0207669_10016391 | 3300025937 | Bacteria | 3764 |
| 63 | Ga0207689_10034449 | 3300025942 | Bacteria | 4206 |
| 64 | Ga0207668_10008195 | 3300025972 | Bacteria | 6223 |
| 65 | Ga0207668_10021551 | 3300025972 | Bacteria | 4110 |
| 66 | Ga0207639_10001881 | 3300026041 | Bacteria | 14112 |
| 67 | Ga0207641_10107857 | 3300026088 | Bacteria | 2464 |
| 68 | Ga0207675_100152292 | 3300026118 | Bacteria | 2202 |
| 69 | Ga0207683_10044437 | 3300026121 | Bacteria | 3884 |
| 70 | Ga0209813_10016264 | 3300027866 | Bacteria | 2028 |
| 71 | Ga0265334_10004557 | 3300028573 | Bacteria | 6142 |
| 72 | Ga0316177_1199791 | 3300030731 | Bacteria | 2443 |
| 73 | Ga0265328_10009450 | 3300031239 | Bacteria | 3969 |
| 74 | Ga0265329_10000473 | 3300031242 | Bacteria | 20922 |
| 75 | Ga0307509_10050098 | 3300031507 | Bacteria | 4472 |
| 76 | Ga0265314_10000020 | 3300031711 | Bacteria | 307052 |
| 77 | Ga0307516_10032091 | 3300031730 | Bacteria | 5290 |
| 78 | Ga0307516_10096957 | 3300031730 | Bacteria | 2769 |
| 79 | Ga0307414_10116528 | 3300032004 | Bacteria | 2045 |
| 80 | Ga0307510_10165530 | 3300033180 | Bacteria | 1800 |
| 81 | Ga0315911_1000013 | 3300033442 | Bacteria | 239334 |
| 82 | Ga0237819_00436 | 3300038705 | Bacteria | 14308 |
| 83 | Ga0400484_19354 | 3300038725 | Bacteria | 30119 |
| 84 | Ga0400490_10647 | 3300038726 | Bacteria | 20137 |
| 85 | Ga0400488_01880 | 3300038741 | Bacteria | 8519 |
| 86 | Ga0400486_18985 | 3300038742 | Bacteria | 2962 |
| 87 | Ga0400483_158267 | 3300039062 | Bacteria | 9924 |
| 88 | Ga0400483_160300 | 3300039062 | Bacteria | 4097 |
| 89 | Ga0400487_39503 | 3300039110 | Bacteria | 20632 |
| 90 | Ga0436360_0284130 | 3300039438 | Bacteria | 2543 |
| 91 | Ga0451577_0001029 | 3300042876 | Bacteria | 40446 |
| 92 | Ga0451577_0005586 | 3300042876 | Bacteria | 12798 |
| 93 | Ga0451577_0066094 | 3300042876 | Bacteria | 3226 |
| 94 | Ga0451577_0102077 | 3300042876 | Unclassified | 2563 |
| 95 | Ga0466964_0001265 | 3300044706 | Bacteria | 8602 |
| 96 | Ga0453684_0007658 | 3300044712 | Bacteria | 19763 |
| 97 | Ga0466968_0001274 | 3300044735 | Bacteria | 8972 |
| 98 | Ga0495592_0078218 | 3300046454 | Bacteria | 2396 |
| 99 | Ga0495629_0002578 | 3300046459 | Bacteria | 13885 |
| 100 | Ga0495606_0010654 | 3300046507 | Bacteria | 7602 |
| 101 | Ga0495648_0006583 | 3300046524 | Bacteria | 9445 |
| 102 | Ga0495642_0077069 | 3300046528 | Bacteria | 1400 |
| 103 | Ga0495640_0116661 | 3300046533 | Bacteria | 1739 |
| 104 | Ga0495586_0000604 | 3300046535 | Bacteria | 20799 |
| 105 | Ga0495634_0059838 | 3300046642 | Bacteria | 2536 |
| 106 | Ga0495625_0004630 | 3300046660 | Bacteria | 12929 |
| 107 | Ga0495625_0015912 | 3300046660 | Bacteria | 5935 |
| 108 | Ga0495625_0039647 | 3300046660 | Bacteria | 3438 |
| 109 | Ga0495657_0006517 | 3300046675 | Bacteria | 9128 |
| 110 | Ga0495658_0003936 | 3300046683 | Bacteria | 7330 |
| 111 | Ga0495658_0018977 | 3300046683 | Unclassified | 3584 |
| 112 | Ga0495613_0004900 | 3300046689 | Bacteria | 10058 |
| 113 | Ga0495613_0039918 | 3300046689 | Unclassified | 3478 |
| 114 | Ga0495670_0000004 | 3300046691 | Bacteria | 310086 |
| 115 | Ga0495649_0013278 | 3300046694 | Bacteria | 4756 |
| 116 | Ga0495600_0002065 | 3300046809 | Bacteria | 11328 |
| 117 | Ga0495677_0002016 | 3300047445 | Bacteria | 8110 |
| 118 | Ga0495686_0000640 | 3300047472 | Bacteria | 48223 |
| 119 | Ga0496101_0036975 | 3300048904 | Bacteria | 3461 |
| 120 | Ga0496102_0038448 | 3300048905 | Bacteria | 4319 |
| 121 | Ga0496104_0001003 | 3300048907 | Bacteria | 24153 |
| 122 | Ga0496104_0001514 | 3300048907 | Bacteria | 20053 |
| 123 | Ga0496104_0027253 | 3300048907 | Bacteria | 5287 |
| 124 | Ga0496105_0002006 | 3300048908 | Bacteria | 14681 |
| 125 | Ga0496106_0096317 | 3300048909 | Unclassified | 2290 |
| 126 | Ga0496112_0165733 | 3300048915 | Bacteria | 2176 |
| 127 | Ga0496114_0118361 | 3300048917 | Bacteria | 2276 |
| 128 | Ga0496119_0027604 | 3300048922 | Bacteria | 3896 |
| 129 | Ga0496120_0004650 | 3300048923 | Bacteria | 11360 |
| 130 | Ga0496120_0007480 | 3300048923 | Bacteria | 8113 |
| 131 | Ga0496121_0009637 | 3300048924 | Bacteria | 11064 |
| 132 | Ga0496121_0026268 | 3300048924 | Bacteria | 5493 |
| 133 | Ga0496121_0080169 | 3300048924 | Bacteria | 2589 |
| 134 | Ga0496125_0074123 | 3300048928 | Bacteria | 2641 |
| 135 | Ga0496126_0024061 | 3300048929 | Bacteria | 5885 |
| 136 | Ga0501034_0000148 | 3300049571 | Bacteria | 131931 |
| 137 | nmdc:mga06z11_38477_c1 | 3300050494 | Bacteria | 2376 |
| 138 | nmdc:mga07m45_10392_c1 | 3300050496 | Bacteria | 4861 |
| 139 | nmdc:mga09592_22290_c1 | 3300050508 | Bacteria | 5226 |
| 140 | nmdc:mga06r32_18141_c1 | 3300050510 | Bacteria | 6438 |
| 141 | nmdc:mga06r32_1989_c1 | 3300050510 | Bacteria | 18266 |
| 142 | nmdc:mga06r32_90823_c1 | 3300050510 | Bacteria | 2984 |
| 143 | Ga0495601_0072493 | 3300053077 | Bacteria | 2200 |
| 144 | Ga0500643_000154 | 3300053087 | Bacteria | 69581 |
| 145 | Ga0500643_000725 | 3300053087 | Bacteria | 21669 |
| 146 | Ga0500583_0005311 | 3300053092 | Bacteria | 4304 |
| 147 | Ga0500566_0000330 | 3300053094 | Bacteria | 25769 |
| 148 | Ga0500641_0015281 | 3300053096 | Bacteria | 2846 |
| 149 | Ga0500555_007385 | 3300053103 | Bacteria | 3121 |
| 150 | Ga0500557_000012 | 3300053105 | Bacteria | 115728 |
| 151 | Ga0500595_006432 | 3300053119 | Bacteria | 4984 |
| 152 | Ga0500595_023044 | 3300053119 | Bacteria | 2193 |
| 153 | Ga0500608_000354 | 3300053122 | Bacteria | 17690 |
| 154 | Ga0500642_0000111 | 3300053130 | Bacteria | 38004 |
| 155 | Ga0500658_0022777 | 3300053134 | Bacteria | 2386 |
| 156 | Ga0500559_0018452 | 3300053136 | Bacteria | 2949 |
| 157 | Ga0500577_0001067 | 3300053142 | Bacteria | 7065 |
| 158 | Ga0500616_0009366 | 3300053153 | Bacteria | 5963 |
| 159 | Ga0500611_002299 | 3300053727 | Bacteria | 2263 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046528 | Ga0495642_0077069 | Ga0495642_0077069_15_1289 | 417 |
| 2 | 3300005435 | Ga0070714_100000875 | Ga0070714_10000087517 | 445 |
| 3 | 3300046533 | Ga0495640_0116661 | Ga0495640_0116661_38_1552 | 464 |
| 4 | 3300050510 | nmdc:mga06r32_90823_c1 | nmdc:mga06r32_90823_c1_1417_2943 | 486 |
| 5 | 3300003762 | Ga0055542_1005145 | Ga0055542_10051453 | 489 |
| 6 | 3300025254 | Ga0209148_1000170 | Ga0209148_100017068 | 489 |
| 7 | 3300025272 | Ga0209455_1001191 | Ga0209455_10011912 | 489 |
| 8 | 3300046507 | Ga0495606_0010654 | Ga0495606_0010654_4383_5909 | 489 |
| 9 | 3300046524 | Ga0495648_0006583 | Ga0495648_0006583_6705_8231 | 489 |
| 10 | 3300046660 | Ga0495625_0039647 | Ga0495625_0039647_590_2116 | 489 |
| 11 | 3300046694 | Ga0495649_0013278 | Ga0495649_0013278_1935_3461 | 489 |
| 12 | 3300048923 | Ga0496120_0007480 | Ga0496120_0007480_5536_7062 | 489 |
| 13 | 3300053087 | Ga0500643_000154 | Ga0500643_000154_24894_26420 | 489 |
| 14 | 3300053096 | Ga0500641_0015281 | Ga0500641_0015281_996_2522 | 489 |
| 15 | 3300053103 | Ga0500555_007385 | Ga0500555_007385_762_2288 | 489 |
| 16 | 3300053130 | Ga0500642_0000111 | Ga0500642_0000111_29321_30847 | 489 |
| 17 | 3300005616 | Ga0068852_100003652 | Ga0068852_1000036529 | 490 |
| 18 | 3300009093 | Ga0105240_10005155 | Ga0105240_1000515513 | 490 |
| 19 | 3300009098 | Ga0105245_10044764 | Ga0105245_100447641 | 490 |
| 20 | 3300009545 | Ga0105237_10049327 | Ga0105237_100493272 | 490 |
| 21 | 3300010375 | Ga0105239_10108972 | Ga0105239_101089722 | 490 |
| 22 | 3300025913 | Ga0207695_10000065 | Ga0207695_10000065309 | 490 |
| 23 | 3300033180 | Ga0307510_10165530 | Ga0307510_101655301 | 490 |
| 24 | 3300046454 | Ga0495592_0078218 | Ga0495592_0078218_630_2156 | 490 |
| 25 | 3300046459 | Ga0495629_0002578 | Ga0495629_0002578_8032_9558 | 490 |
| 26 | 3300046675 | Ga0495657_0006517 | Ga0495657_0006517_3240_4766 | 490 |
| 27 | 3300046689 | Ga0495613_0004900 | Ga0495613_0004900_3935_5461 | 490 |
| 28 | 3300046809 | Ga0495600_0002065 | Ga0495600_0002065_107_1633 | 490 |
| 29 | 3300048904 | Ga0496101_0036975 | Ga0496101_0036975_905_2431 | 490 |
| 30 | 3300048905 | Ga0496102_0038448 | Ga0496102_0038448_1152_2678 | 490 |
| 31 | 3300048907 | Ga0496104_0027253 | Ga0496104_0027253_1694_3220 | 490 |
| 32 | 3300048908 | Ga0496105_0002006 | Ga0496105_0002006_6110_7636 | 490 |
| 33 | 3300048915 | Ga0496112_0165733 | Ga0496112_0165733_562_2088 | 490 |
| 34 | 3300048922 | Ga0496119_0027604 | Ga0496119_0027604_805_2331 | 490 |
| 35 | 3300048923 | Ga0496120_0004650 | Ga0496120_0004650_1693_3219 | 490 |
| 36 | 3300048924 | Ga0496121_0080169 | Ga0496121_0080169_797_2323 | 490 |
| 37 | 3300048928 | Ga0496125_0074123 | Ga0496125_0074123_1040_2566 | 490 |
| 38 | 3300053094 | Ga0500566_0000330 | Ga0500566_0000330_9331_10857 | 490 |
| 39 | 3300053105 | Ga0500557_000012 | Ga0500557_000012_75158_76684 | 490 |
| 40 | 3300053119 | Ga0500595_023044 | Ga0500595_023044_564_2090 | 490 |
| 41 | 3300005983 | Ga0081540_1028304 | Ga0081540_10283044 | 491 |
| 42 | 3300046660 | Ga0495625_0015912 | Ga0495625_0015912_117_1676 | 491 |
| 43 | 3300047472 | Ga0495686_0000640 | Ga0495686_0000640_12468_14027 | 491 |
| 44 | 3300042876 | Ga0451577_0005586 | Ga0451577_0005586_10085_11635 | 493 |
| 45 | 3300009551 | Ga0105238_10042674 | Ga0105238_100426742 | 495 |
| 46 | 3300025929 | Ga0207664_10000749 | Ga0207664_1000074916 | 495 |
| 47 | 3300026088 | Ga0207641_10107857 | Ga0207641_101078572 | 495 |
| 48 | 3300031239 | Ga0265328_10009450 | Ga0265328_100094502 | 495 |
| 49 | 3300031242 | Ga0265329_10000473 | Ga0265329_100004736 | 495 |
| 50 | 3300031711 | Ga0265314_10000020 | Ga0265314_10000020160 | 495 |
| 51 | 3300042876 | Ga0451577_0066094 | Ga0451577_0066094_885_2492 | 495 |
| 52 | 3300025972 | Ga0207668_10008195 | Ga0207668_100081953 | 497 |
| 53 | iso_pu_bacteria | 2829745981 | 2829750205 | 497 |
| 54 | iso_pu_bacteria | 2511231028 | 2511400124 | 499 |
| 55 | iso_pu_bacteria | 2513237096 | 2513658528 | 499 |
| 56 | iso_pu_bacteria | 2513237137 | 2513860110 | 499 |
| 57 | iso_pu_bacteria | 2513237145 | 2513920644 | 499 |
| 58 | iso_pu_bacteria | 2517572143 | 2517888591 | 499 |
| 59 | iso_pu_bacteria | 2816332527 | 2818237421 | 499 |
| 60 | iso_pu_bacteria | 2824704595 | 2824709987 | 499 |
| 61 | iso_pu_bacteria | 2824753945 | 2824759174 | 499 |
| 62 | iso_pu_bacteria | 2824763712 | 2824770786 | 499 |
| 63 | iso_pu_bacteria | 2888378607 | 2888379822 | 499 |
| 64 | iso_pu_bacteria | 2903748898 | 2903755782 | 499 |
| 65 | iso_pu_bacteria | 2904711408 | 2904715821 | 499 |
| 66 | iso_pu_bacteria | 2906635258 | 2906637725 | 499 |
| 67 | iso_pu_bacteria | 2906660503 | 2906668293 | 499 |
| 68 | iso_pu_bacteria | 2908739725 | 2908747129 | 499 |
| 69 | iso_pu_bacteria | 2738543031 | 2739351601 | 500 |
| 70 | iso_pu_bacteria | 2739367664 | 2739652200 | 500 |
| 71 | iso_pu_bacteria | 2739367865 | 2740030674 | 500 |
| 72 | iso_pu_bacteria | 2811994881 | 2812365799 | 500 |
| 73 | iso_pu_bacteria | 2923519811 | 2923519820 | 500 |
| 74 | 3300006847 | Ga0075431_100000391 | Ga0075431_10000039122 | 501 |
| 75 | 3300050508 | nmdc:mga09592_22290_c1 | nmdc:mga09592_22290_c1_336_1919 | 501 |
| 76 | 3300050510 | nmdc:mga06r32_1989_c1 | nmdc:mga06r32_1989_c1_652_2235 | 501 |
| 77 | 3300005334 | Ga0068869_100006588 | Ga0068869_1000065884 | 502 |
| 78 | 3300005347 | Ga0070668_100080188 | Ga0070668_1000801881 | 502 |
| 79 | 3300005840 | Ga0068870_10027531 | Ga0068870_100275311 | 502 |
| 80 | 3300005844 | Ga0068862_100080754 | Ga0068862_1000807542 | 502 |
| 81 | 3300005983 | Ga0081540_1004781 | Ga0081540_10047811 | 502 |
| 82 | 3300005983 | Ga0081540_1020930 | Ga0081540_10209303 | 502 |
| 83 | 3300005985 | Ga0081539_10011587 | Ga0081539_100115874 | 502 |
| 84 | 3300006195 | Ga0075366_10026941 | Ga0075366_100269414 | 502 |
| 85 | 3300013306 | Ga0163162_10265044 | Ga0163162_102650442 | 502 |
| 86 | 3300013308 | Ga0157375_10086771 | Ga0157375_100867712 | 502 |
| 87 | 3300014326 | Ga0157380_10042822 | Ga0157380_100428222 | 502 |
| 88 | 3300024225 | Ga0224572_1012399 | Ga0224572_10123991 | 502 |
| 89 | 3300025908 | Ga0207643_10012642 | Ga0207643_100126423 | 502 |
| 90 | 3300025923 | Ga0207681_10034904 | Ga0207681_100349042 | 502 |
| 91 | 3300025926 | Ga0207659_10020018 | Ga0207659_100200181 | 502 |
| 92 | 3300025937 | Ga0207669_10016391 | Ga0207669_100163913 | 502 |
| 93 | 3300025942 | Ga0207689_10034449 | Ga0207689_100344493 | 502 |
| 94 | 3300025972 | Ga0207668_10021551 | Ga0207668_100215513 | 502 |
| 95 | 3300026118 | Ga0207675_100152292 | Ga0207675_1001522922 | 502 |
| 96 | 3300026121 | Ga0207683_10044437 | Ga0207683_100444374 | 502 |
| 97 | 3300031730 | Ga0307516_10096957 | Ga0307516_100969572 | 502 |
| 98 | 3300048924 | Ga0496121_0009637 | Ga0496121_0009637_8922_10445 | 502 |
| 99 | 3300003203 | JGI25406J46586_10019861 | JGI25406J46586_100198613 | 503 |
| 100 | 3300003215 | JGI25153J46596_10001176 | JGI25153J46596_100011767 | 503 |
| 101 | 3300003215 | JGI25153J46596_10003218 | JGI25153J46596_100032187 | 503 |
| 102 | 3300003659 | JGI25404J52841_10008485 | JGI25404J52841_100084852 | 503 |
| 103 | 3300003794 | Ga0055531_10003436 | Ga0055531_100034361 | 503 |
| 104 | 3300005262 | Ga0065165_1009808 | Ga0065165_10098083 | 503 |
| 105 | 3300005983 | Ga0081540_1004208 | Ga0081540_10042088 | 503 |
| 106 | 3300005985 | Ga0081539_10001563 | Ga0081539_1000156330 | 503 |
| 107 | 3300006028 | Ga0070717_10000921 | Ga0070717_100009213 | 503 |
| 108 | 3300006042 | Ga0075368_10005901 | Ga0075368_100059014 | 503 |
| 109 | 3300006353 | Ga0075370_10065515 | Ga0075370_100655152 | 503 |
| 110 | 3300006846 | Ga0075430_100097375 | Ga0075430_1000973752 | 503 |
| 111 | 3300006880 | Ga0075429_100165986 | Ga0075429_1001659862 | 503 |
| 112 | 3300009545 | Ga0105237_10029071 | Ga0105237_100290715 | 503 |
| 113 | 3300025295 | Ga0209564_1012205 | Ga0209564_10122053 | 503 |
| 114 | 3300025297 | Ga0209758_1000015 | Ga0209758_100001527 | 503 |
| 115 | 3300025299 | Ga0209256_1010104 | Ga0209256_10101044 | 503 |
| 116 | 3300025302 | Ga0207426_1016958 | Ga0207426_10169582 | 503 |
| 117 | 3300025304 | Ga0209257_1000390 | Ga0209257_100039066 | 503 |
| 118 | 3300025914 | Ga0207671_10093173 | Ga0207671_100931732 | 503 |
| 119 | 3300027866 | Ga0209813_10016264 | Ga0209813_100162642 | 503 |
| 120 | 3300031507 | Ga0307509_10050098 | Ga0307509_100500982 | 503 |
| 121 | 3300033442 | Ga0315911_1000013 | Ga0315911_1000013214 | 503 |
| 122 | 3300038725 | Ga0400484_19354 | Ga0400484_19354_27945_29459 | 503 |
| 123 | 3300038726 | Ga0400490_10647 | Ga0400490_10647_9622_11136 | 503 |
| 124 | 3300038741 | Ga0400488_01880 | Ga0400488_01880_4209_5801 | 503 |
| 125 | 3300038742 | Ga0400486_18985 | Ga0400486_18985_1201_2793 | 503 |
| 126 | 3300039062 | Ga0400483_158267 | Ga0400483_158267_3856_5448 | 503 |
| 127 | 3300039062 | Ga0400483_160300 | Ga0400483_160300_507_2099 | 503 |
| 128 | 3300039110 | Ga0400487_39503 | Ga0400487_39503_12179_13693 | 503 |
| 129 | 3300042876 | Ga0451577_0102077 | Ga0451577_0102077_914_2524 | 503 |
| 130 | 3300046683 | Ga0495658_0018977 | Ga0495658_0018977_351_1994 | 503 |
| 131 | 3300048909 | Ga0496106_0096317 | Ga0496106_0096317_195_1841 | 503 |
| 132 | 3300048924 | Ga0496121_0026268 | Ga0496121_0026268_1158_2684 | 503 |
| 133 | 3300048929 | Ga0496126_0024061 | Ga0496126_0024061_1947_3473 | 503 |
| 134 | 3300050494 | nmdc:mga06z11_38477_c1 | nmdc:mga06z11_38477_c1_734_2260 | 503 |
| 135 | 3300050496 | nmdc:mga07m45_10392_c1 | nmdc:mga07m45_10392_c1_736_2262 | 503 |
| 136 | 3300050510 | nmdc:mga06r32_18141_c1 | nmdc:mga06r32_18141_c1_1755_3317 | 503 |
| 137 | 3300053077 | Ga0495601_0072493 | Ga0495601_0072493_466_2037 | 503 |
| 138 | 3300053092 | Ga0500583_0005311 | Ga0500583_0005311_2421_3947 | 503 |
| 139 | 3300053134 | Ga0500658_0022777 | Ga0500658_0022777_358_1884 | 503 |
| 140 | 3300053142 | Ga0500577_0001067 | Ga0500577_0001067_1606_3132 | 503 |
| 141 | 3300001979 | JGI24740J21852_10003077 | JGI24740J21852_100030773 | 504 |
| 142 | 3300001989 | JGI24739J22299_10003558 | JGI24739J22299_100035582 | 504 |
| 143 | 3300005327 | Ga0070658_10000320 | Ga0070658_1000032033 | 504 |
| 144 | 3300005471 | Ga0070698_100239158 | Ga0070698_1002391581 | 504 |
| 145 | 3300005539 | Ga0068853_100000085 | Ga0068853_10000008566 | 504 |
| 146 | 3300013104 | Ga0157370_10004778 | Ga0157370_1000477815 | 504 |
| 147 | 3300013105 | Ga0157369_10108901 | Ga0157369_101089013 | 504 |
| 148 | 3300013306 | Ga0163162_10077291 | Ga0163162_100772914 | 504 |
| 149 | 3300014325 | Ga0163163_10000002 | Ga0163163_10000002371 | 504 |
| 150 | 3300014968 | Ga0157379_10078640 | Ga0157379_100786403 | 504 |
| 151 | 3300025250 | Ga0209026_1002187 | Ga0209026_10021874 | 504 |
| 152 | 3300025909 | Ga0207705_10001185 | Ga0207705_1000118513 | 504 |
| 153 | 3300026041 | Ga0207639_10001881 | Ga0207639_100018816 | 504 |
| 154 | 3300028573 | Ga0265334_10004557 | Ga0265334_100045573 | 504 |
| 155 | 3300030731 | Ga0316177_1199791 | Ga0316177_11997911 | 504 |
| 156 | 3300031730 | Ga0307516_10032091 | Ga0307516_100320913 | 504 |
| 157 | 3300032004 | Ga0307414_10116528 | Ga0307414_101165282 | 504 |
| 158 | 3300038705 | Ga0237819_00436 | Ga0237819_00436_12713_14254 | 504 |
| 159 | 3300039438 | Ga0436360_0284130 | Ga0436360_0284130_180_1703 | 504 |
| 160 | 3300042876 | Ga0451577_0001029 | Ga0451577_0001029_20721_22268 | 504 |
| 161 | 3300044706 | Ga0466964_0001265 | Ga0466964_0001265_1722_3275 | 504 |
| 162 | 3300044712 | Ga0453684_0007658 | Ga0453684_0007658_1719_3266 | 504 |
| 163 | 3300044735 | Ga0466968_0001274 | Ga0466968_0001274_4506_6059 | 504 |
| 164 | 3300046535 | Ga0495586_0000604 | Ga0495586_0000604_2939_4573 | 504 |
| 165 | 3300046642 | Ga0495634_0059838 | Ga0495634_0059838_519_2153 | 504 |
| 166 | 3300046660 | Ga0495625_0004630 | Ga0495625_0004630_8122_9654 | 504 |
| 167 | 3300046683 | Ga0495658_0003936 | Ga0495658_0003936_3987_5621 | 504 |
| 168 | 3300046689 | Ga0495613_0039918 | Ga0495613_0039918_306_1940 | 504 |
| 169 | 3300046691 | Ga0495670_0000004 | Ga0495670_0000004_241826_243358 | 504 |
| 170 | 3300047445 | Ga0495677_0002016 | Ga0495677_0002016_6461_8020 | 504 |
| 171 | 3300048907 | Ga0496104_0001003 | Ga0496104_0001003_21197_22747 | 504 |
| 172 | 3300048907 | Ga0496104_0001514 | Ga0496104_0001514_4500_6050 | 504 |
| 173 | 3300048917 | Ga0496114_0118361 | Ga0496114_0118361_276_1814 | 504 |
| 174 | 3300049571 | Ga0501034_0000148 | Ga0501034_0000148_80751_82292 | 504 |
| 175 | 3300053087 | Ga0500643_000725 | Ga0500643_000725_3968_5527 | 504 |
| 176 | 3300053119 | Ga0500595_006432 | Ga0500595_006432_1953_3482 | 504 |
| 177 | 3300053122 | Ga0500608_000354 | Ga0500608_000354_480_1997 | 504 |
| 178 | 3300053136 | Ga0500559_0018452 | Ga0500559_0018452_1072_2631 | 504 |
| 179 | 3300053153 | Ga0500616_0009366 | Ga0500616_0009366_1671_3206 | 504 |
| 180 | 3300053727 | Ga0500611_002299 | Ga0500611_002299_566_2086 | 504 |
| 181 | iso_pu_bacteria | 2643221573 | 2643880932 | 504 |
| 182 | iso_pu_bacteria | 2643221728 | 2644699582 | 504 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6b4c-assembly3.cif.gz_C | structure of viperin from trichoderma virens | 0.8171 | 193 | 370 |
| 7n7i-assembly3.cif.gz_C | x-ray crystal structure of viperin-like enzyme from trichoderma virens | 0.8106 | 193 | 374 |
| 6b4c-assembly12.cif.gz_L | structure of viperin from trichoderma virens | 0.8076 | 193 | 370 |
| 6b4c-assembly1.cif.gz_A | structure of viperin from trichoderma virens | 0.8024 | 193 | 370 |
| 4r3u-assembly1.cif.gz_C | crystal structure of 2-hydroxyisobutyryl-coa mutase | 0.7942 | 2 | 103 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q58275_166_383_3.80.30.20 | Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain | 0.8461 | 194 | 385 | 3.80.30.20 |
| af_P96395_5_123_3.40.50.280 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin-binding domain | 0.8416 | 33 | 145 | 3.40.50.280 |
| af_A4IGH2_157_284_3.30.750.200 | Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; | 0.8151 | 299 | 386 | 3.30.750.200 |
| af_Q58882_171_402_3.80.30.20 | Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain | 0.8035 | 196 | 383 | 3.80.30.20 |
| af_Q76KC5_1_143_3.40.50.2300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator | 0.8013 | 1 | 102 | 3.40.50.2300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A529FBB5-F1-model_v4 | Magnesium-protoporphyrin IX monomethyl ester cyclase | 0.9787 | 65 | 186 |
GO:0005829
GO:0031419 GO:0046872 GO:0051539 |
| AF-A0A3S3M7B9-F1-model_v4 | Magnesium-protoporphyrin IX monomethyl ester cyclase | 0.965 | 1 | 180 |
GO:0005829
GO:0031419 GO:0046872 GO:0051536 |
| AF-A0A842NFA4-F1-model_v4 | Cobalamin B12-binding domain-containing protein | 0.9614 | 1 | 155 |
GO:0005829
GO:0031419 GO:0046872 GO:0051539 |
| AF-A0A7W0W7L4-F1-model_v4 | Radical SAM protein | 0.9598 | 2 | 469 |
GO:0003824
GO:0005829 GO:0031419 GO:0046872 GO:0051539 |
| AF-A0A3S3M7B9-F1-model_v4 | Magnesium-protoporphyrin IX monomethyl ester cyclase | 0.9546 | 1 | 180 |
GO:0005829
GO:0031419 GO:0046872 GO:0051536 |
Predicted Structure (AlphaFold2)
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