F266706
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 175 | 136 | 175 | 468 |
Family's Representative Sequence
| Representative Sequence | 3300036712|Ga0316584_0000236|Ga0316584_0000236_3723_5267 |
| Length | 514 |
| Sequence | MQADSSAAAPRNKSVRCVIELTLKQTSHEIPQLGLRGPWKKSPGGCYIPAMRRAKIVCTLGPASASKEMIGRLVGAGMDVARLNFSHGTHEDHRRTFGLVREVARERAQSIAILQDLQGPKIRVGHMQGGAVELVAGRELELTIEKVEGTAELLPHTYEPLAQDVDPGDRILLDDGRLELEVLGAKAGRVSCRVVAGGTLTDRKGMNLPGVKLSTPALTEKDRRDLALGVELGVDYVALSFVRRPEDVQEAKDLARGIPVIAKIEKPEAVERFDEILAVTNGVMVARGDLGVEMGPERVPLIQKQLIEQTNLAGKVVITATEMLDSMRRNPRPTRAEASDVANAILDGTDAVMLSGETAAGDYPEQSVATMDRIVREIECSARYRRLPEPPSVRRRETTNAVARAAVVASKEVEAGSILCFTESGATATLISEYRPPAHILAVTGSRATYRRLALHWGVFPLCVDHTPSTDETIARMTEAALGAGVIKRGEIVVLTMGTREHGASDLLKIHRVE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 4 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 6 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 20 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 23 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 25 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 26 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 27 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 29 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 30 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 31 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 32 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 33 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 34 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 35 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 36 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 37 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 38 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 39 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300021441 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 | Metagenome | Rhizosphere |
| 49 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 69 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 72 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 73 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 74 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 75 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 76 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 77 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 78 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 79 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 80 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 81 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 82 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 83 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 84 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 85 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 86 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 87 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 88 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 89 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 90 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 91 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 92 | 3300035090 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 | Metagenome | Rhizosphere |
| 93 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 94 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 95 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 96 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 97 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 98 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 99 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 100 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 101 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 102 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 103 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 104 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 105 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 106 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 109 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049665 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought | Metagenome | Rhizosphere |
| 118 | 3300049667 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control | Metagenome | Rhizosphere |
| 119 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 120 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 123 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 124 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 131 | 3300053095 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere | Metagenome | Endosphere |
| 132 | 3300053111 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere | Metagenome | Endosphere |
| 133 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 134 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
| 135 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 136 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.14 |
| Nodule | 0 |
| Rhizoplane | 0.57 |
| Rhizosphere | 85.71 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.57 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10005441 | 3300003203 | Bacteria | 5908 |
| 2 | Ga0070658_10012959 | 3300005327 | Bacteria | 6693 |
| 3 | Ga0070658_10072700 | 3300005327 | Bacteria | 2819 |
| 4 | Ga0068869_100027510 | 3300005334 | Bacteria | 3964 |
| 5 | Ga0070682_100079385 | 3300005337 | Bacteria | 2119 |
| 6 | Ga0068868_100063110 | 3300005338 | Bacteria | 2938 |
| 7 | Ga0070689_100003757 | 3300005340 | Bacteria | 10163 |
| 8 | Ga0070689_100051542 | 3300005340 | Bacteria | 3182 |
| 9 | Ga0070687_100017112 | 3300005343 | Bacteria | 3326 |
| 10 | Ga0070692_10022020 | 3300005345 | Bacteria | 3108 |
| 11 | Ga0070671_100108754 | 3300005355 | Bacteria | 2328 |
| 12 | Ga0070674_100007889 | 3300005356 | Bacteria | 6300 |
| 13 | Ga0070667_100078588 | 3300005367 | Bacteria | 2819 |
| 14 | Ga0070701_10006245 | 3300005438 | Bacteria | 4999 |
| 15 | Ga0070700_100083625 | 3300005441 | Bacteria | 2067 |
| 16 | Ga0070694_100001946 | 3300005444 | Bacteria | 12245 |
| 17 | Ga0070663_100020314 | 3300005455 | Bacteria | 4395 |
| 18 | Ga0070707_100000117 | 3300005468 | Bacteria | 74269 |
| 19 | Ga0070698_100004362 | 3300005471 | Bacteria | 15554 |
| 20 | Ga0070698_100042458 | 3300005471 | Bacteria | 4664 |
| 21 | Ga0070679_100048100 | 3300005530 | Bacteria | 4250 |
| 22 | Ga0070684_100084794 | 3300005535 | Bacteria | 2809 |
| 23 | Ga0070665_100007841 | 3300005548 | Bacteria | 10831 |
| 24 | Ga0070704_100028151 | 3300005549 | Bacteria | 3735 |
| 25 | Ga0070704_100106825 | 3300005549 | Bacteria | 2122 |
| 26 | Ga0068857_100055134 | 3300005577 | Bacteria | 3528 |
| 27 | Ga0070702_100052787 | 3300005615 | Bacteria | 2332 |
| 28 | Ga0068859_100007916 | 3300005617 | Bacteria | 10778 |
| 29 | Ga0068859_100011419 | 3300005617 | Bacteria | 8929 |
| 30 | Ga0068863_100059781 | 3300005841 | Bacteria | 3606 |
| 31 | Ga0068863_100060018 | 3300005841 | Bacteria | 3598 |
| 32 | Ga0081539_10002474 | 3300005985 | Bacteria | 25999 |
| 33 | Ga0070717_10004958 | 3300006028 | Bacteria | 9682 |
| 34 | Ga0075365_10013654 | 3300006038 | Bacteria | 4869 |
| 35 | Ga0075364_10023268 | 3300006051 | Bacteria | 3921 |
| 36 | Ga0075362_10007009 | 3300006177 | Bacteria | 4234 |
| 37 | Ga0075367_10020830 | 3300006178 | Bacteria | 3657 |
| 38 | Ga0075367_10027875 | 3300006178 | Bacteria | 3217 |
| 39 | Ga0075366_10011987 | 3300006195 | Bacteria | 4909 |
| 40 | Ga0075428_100004773 | 3300006844 | Bacteria | 15010 |
| 41 | Ga0075430_100028689 | 3300006846 | Bacteria | 4726 |
| 42 | Ga0075430_100159343 | 3300006846 | Bacteria | 1879 |
| 43 | Ga0075430_100246630 | 3300006846 | Bacteria | 1480 |
| 44 | Ga0075431_100037787 | 3300006847 | Bacteria | 4972 |
| 45 | Ga0075433_10021351 | 3300006852 | Bacteria | 5430 |
| 46 | Ga0075433_10021852 | 3300006852 | Bacteria | 5368 |
| 47 | Ga0075429_100007756 | 3300006880 | Bacteria | 9321 |
| 48 | Ga0075429_100030053 | 3300006880 | Bacteria | 4719 |
| 49 | Ga0068865_100006573 | 3300006881 | Bacteria | 7107 |
| 50 | Ga0097620_100007916 | 3300006931 | Bacteria | 10778 |
| 51 | Ga0097620_100011419 | 3300006931 | Bacteria | 8929 |
| 52 | Ga0111539_10000712 | 3300009094 | Bacteria | 43173 |
| 53 | Ga0111539_10120494 | 3300009094 | Bacteria | 3074 |
| 54 | Ga0105245_10000036 | 3300009098 | Bacteria | 147150 |
| 55 | Ga0114129_10036971 | 3300009147 | Bacteria | 6894 |
| 56 | Ga0114129_10217453 | 3300009147 | Bacteria | 2580 |
| 57 | Ga0105243_10006424 | 3300009148 | Bacteria | 9086 |
| 58 | Ga0105239_10018729 | 3300010375 | Bacteria | 7648 |
| 59 | Ga0157378_10037041 | 3300013297 | Bacteria | 4319 |
| 60 | Ga0157379_10025965 | 3300014968 | Bacteria | 5209 |
| 61 | Ga0157376_10072081 | 3300014969 | Bacteria | 2937 |
| 62 | Ga0213871_10021631 | 3300021441 | Bacteria | 1605 |
| 63 | Ga0209676_1000126 | 3300025292 | Bacteria | 191340 |
| 64 | Ga0209050_1004710 | 3300025298 | Bacteria | 9042 |
| 65 | Ga0207705_10027553 | 3300025909 | Bacteria | 4052 |
| 66 | Ga0207652_10077172 | 3300025921 | Bacteria | 2906 |
| 67 | Ga0207646_10000239 | 3300025922 | Bacteria | 75771 |
| 68 | Ga0207646_10047755 | 3300025922 | Bacteria | 3839 |
| 69 | Ga0207659_10031900 | 3300025926 | Bacteria | 3611 |
| 70 | Ga0207687_10000044 | 3300025927 | Bacteria | 100713 |
| 71 | Ga0207709_10087843 | 3300025935 | Bacteria | 2022 |
| 72 | Ga0207670_10005379 | 3300025936 | Bacteria | 7023 |
| 73 | Ga0207670_10018935 | 3300025936 | Bacteria | 4196 |
| 74 | Ga0207669_10012400 | 3300025937 | Bacteria | 4189 |
| 75 | Ga0207691_10144160 | 3300025940 | Bacteria | 2097 |
| 76 | Ga0207667_10209744 | 3300025949 | Bacteria | 1997 |
| 77 | Ga0207640_10128430 | 3300025981 | Bacteria | 1828 |
| 78 | Ga0207677_10008196 | 3300026023 | Bacteria | 5820 |
| 79 | Ga0207708_10163602 | 3300026075 | Bacteria | 1758 |
| 80 | Ga0207648_10012875 | 3300026089 | Bacteria | 7812 |
| 81 | Ga0207674_10043974 | 3300026116 | Bacteria | 4603 |
| 82 | Ga0207675_100090142 | 3300026118 | Bacteria | 2883 |
| 83 | Ga0207683_10022209 | 3300026121 | Bacteria | 5445 |
| 84 | Ga0207428_10000060 | 3300027907 | Bacteria | 156452 |
| 85 | Ga0268266_10003331 | 3300028379 | Bacteria | 16095 |
| 86 | Ga0268265_10029837 | 3300028380 | Bacteria | 3922 |
| 87 | Ga0265323_10006634 | 3300028653 | Bacteria | 4856 |
| 88 | Ga0307515_10042327 | 3300028794 | Bacteria | 7130 |
| 89 | Ga0265338_10021873 | 3300028800 | Bacteria | 6647 |
| 90 | Ga0265332_10002750 | 3300031238 | Bacteria | 8772 |
| 91 | Ga0307513_10002594 | 3300031456 | Bacteria | 24967 |
| 92 | Ga0307509_10000037 | 3300031507 | Bacteria | 188517 |
| 93 | Ga0307509_10023537 | 3300031507 | Bacteria | 6911 |
| 94 | Ga0307408_100012033 | 3300031548 | Bacteria | 5728 |
| 95 | Ga0307508_10036998 | 3300031616 | Bacteria | 4392 |
| 96 | Ga0316578_10014793 | 3300031728 | Bacteria | 4181 |
| 97 | Ga0307516_10018879 | 3300031730 | Bacteria | 7157 |
| 98 | Ga0307405_10038392 | 3300031731 | Bacteria | 2886 |
| 99 | Ga0307410_10004850 | 3300031852 | Bacteria | 7030 |
| 100 | Ga0307410_10010888 | 3300031852 | Bacteria | 5177 |
| 101 | Ga0307406_10000801 | 3300031901 | Bacteria | 17627 |
| 102 | Ga0307407_10000779 | 3300031903 | Bacteria | 10537 |
| 103 | Ga0307407_10001386 | 3300031903 | Bacteria | 8724 |
| 104 | Ga0307412_10001388 | 3300031911 | Bacteria | 13453 |
| 105 | Ga0307412_10036452 | 3300031911 | Bacteria | 3151 |
| 106 | Ga0307409_100005117 | 3300031995 | Bacteria | 7485 |
| 107 | Ga0307409_100017915 | 3300031995 | Bacteria | 4738 |
| 108 | Ga0307409_100133434 | 3300031995 | Bacteria | 2126 |
| 109 | Ga0307416_100006175 | 3300032002 | Bacteria | 7472 |
| 110 | Ga0307416_100056626 | 3300032002 | Bacteria | 3165 |
| 111 | Ga0307414_10007918 | 3300032004 | Bacteria | 5998 |
| 112 | Ga0307411_10000808 | 3300032005 | Bacteria | 11696 |
| 113 | Ga0307411_10006131 | 3300032005 | Bacteria | 5980 |
| 114 | Ga0307415_100002183 | 3300032126 | Bacteria | 9709 |
| 115 | Ga0307415_100013786 | 3300032126 | Bacteria | 4729 |
| 116 | Ga0373944_0025499 | 3300035089 | Bacteria | 1741 |
| 117 | Ga0373949_0002546 | 3300035090 | Bacteria | 4635 |
| 118 | Ga0373936_0000033 | 3300035113 | Bacteria | 112284 |
| 119 | Ga0373936_0021625 | 3300035113 | Bacteria | 2503 |
| 120 | Ga0373955_0086999 | 3300035172 | Bacteria | 1775 |
| 121 | Ga0373961_0000033 | 3300035241 | Bacteria | 86848 |
| 122 | Ga0316574_0020399 | 3300035398 | Bacteria | 3923 |
| 123 | Ga0373937_0037831 | 3300036401 | Bacteria | 4398 |
| 124 | Ga0316584_0000236 | 3300036712 | Bacteria | 27457 |
| 125 | Ga0395899_0033227 | 3300037312 | Bacteria | 3874 |
| 126 | Ga0395898_0043032 | 3300037466 | Bacteria | 4451 |
| 127 | Ga0395898_0205931 | 3300037466 | Bacteria | 1877 |
| 128 | Ga0395901_0047514 | 3300038443 | Bacteria | 4456 |
| 129 | Ga0436365_0530789 | 3300039437 | Bacteria | 5439 |
| 130 | Ga0436365_1589206 | 3300039437 | Bacteria | 2107 |
| 131 | Ga0439445_0020909 | 3300042004 | Bacteria | 1641 |
| 132 | Ga0466969_0004470 | 3300044656 | Bacteria | 7445 |
| 133 | Ga0453684_0056705 | 3300044712 | Bacteria | 5078 |
| 134 | Ga0495669_0022288 | 3300046684 | Bacteria | 2751 |
| 135 | Ga0495686_0018279 | 3300047472 | Bacteria | 4708 |
| 136 | Ga0496105_0111224 | 3300048908 | Bacteria | 2261 |
| 137 | Ga0501034_0135341 | 3300049571 | Bacteria | 2445 |
| 138 | Ga0501040_0067945 | 3300049576 | Bacteria | 2457 |
| 139 | Ga0501043_0040814 | 3300049579 | Bacteria | 3647 |
| 140 | Ga0501047_0009207 | 3300049581 | Bacteria | 9322 |
| 141 | Ga0501047_0011050 | 3300049581 | Bacteria | 8544 |
| 142 | Ga0501069_0045410 | 3300049585 | Bacteria | 2434 |
| 143 | Ga0501070_0002689 | 3300049586 | Bacteria | 15528 |
| 144 | Ga0501070_0018967 | 3300049586 | Bacteria | 5769 |
| 145 | Ga0501070_0115025 | 3300049586 | Bacteria | 2222 |
| 146 | Ga0501072_0051708 | 3300049588 | Bacteria | 3235 |
| 147 | Ga0501077_0032877 | 3300049593 | Bacteria | 3304 |
| 148 | Ga0501227_000287 | 3300049665 | Bacteria | 10411 |
| 149 | Ga0501230_001369 | 3300049667 | Bacteria | 2887 |
| 150 | Ga0501225_0005661 | 3300049705 | Bacteria | 3662 |
| 151 | Ga0501083_0040699 | 3300049744 | Bacteria | 3154 |
| 152 | Ga0501044_0015742 | 3300049823 | Bacteria | 8145 |
| 153 | nmdc:mga0k408_13675_c1 | 3300050493 | Bacteria | 4456 |
| 154 | nmdc:mga04h51_11859_c1 | 3300050495 | Bacteria | 2431 |
| 155 | nmdc:mga05p37_135345_c1 | 3300050507 | Bacteria | 3022 |
| 156 | nmdc:mga09592_43543_c1 | 3300050508 | Bacteria | 3778 |
| 157 | nmdc:mga09592_63502_c1 | 3300050508 | Bacteria | 3126 |
| 158 | nmdc:mga09592_8267_c1 | 3300050508 | Bacteria | 8465 |
| 159 | nmdc:mga0qj67_191896_c1 | 3300050509 | Bacteria | 1660 |
| 160 | nmdc:mga0qj67_23278_c1 | 3300050509 | Bacteria | 4763 |
| 161 | nmdc:mga06r32_144222_c1 | 3300050510 | Bacteria | 2358 |
| 162 | nmdc:mga06r32_49738_c1 | 3300050510 | Bacteria | 4010 |
| 163 | nmdc:mga06r32_80118_c1 | 3300050510 | Bacteria | 3177 |
| 164 | nmdc:mga06r32_9145_c1 | 3300050510 | Bacteria | 8931 |
| 165 | nmdc:mga08y16_111418_c1 | 3300050511 | Bacteria | 2849 |
| 166 | nmdc:mga0a205_104401_c1 | 3300050515 | Bacteria | 2733 |
| 167 | nmdc:mga0a205_123175_c1 | 3300050515 | Bacteria | 2492 |
| 168 | nmdc:mga0a205_58662_c1 | 3300050515 | Bacteria | 3718 |
| 169 | Ga0500566_0003057 | 3300053094 | Bacteria | 10000 |
| 170 | Ga0500640_024572 | 3300053095 | Bacteria | 2617 |
| 171 | Ga0500572_003362 | 3300053111 | Bacteria | 3675 |
| 172 | Ga0500595_000640 | 3300053119 | Bacteria | 20995 |
| 173 | Ga0500614_000242 | 3300053123 | Bacteria | 14170 |
| 174 | Ga0500642_0024176 | 3300053130 | Bacteria | 2451 |
| 175 | Ga0530510_0029307 | 3300061734 | Bacteria | 3950 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005337 | Ga0070682_100079385 | Ga0070682_1000793852 | 426 |
| 2 | 3300005530 | Ga0070679_100048100 | Ga0070679_1000481002 | 426 |
| 3 | 3300005535 | Ga0070684_100084794 | Ga0070684_1000847942 | 426 |
| 4 | 3300031238 | Ga0265332_10002750 | Ga0265332_100027505 | 426 |
| 5 | 3300049581 | Ga0501047_0009207 | Ga0501047_0009207_43_1326 | 426 |
| 6 | 3300053094 | Ga0500566_0003057 | Ga0500566_0003057_7935_9215 | 426 |
| 7 | 3300053111 | Ga0500572_003362 | Ga0500572_003362_13_1293 | 426 |
| 8 | 3300053130 | Ga0500642_0024176 | Ga0500642_0024176_1154_2434 | 426 |
| 9 | 3300006846 | Ga0075430_100246630 | Ga0075430_1002466301 | 429 |
| 10 | 3300006852 | Ga0075433_10021852 | Ga0075433_100218522 | 429 |
| 11 | 3300035089 | Ga0373944_0025499 | Ga0373944_0025499_206_1495 | 429 |
| 12 | 3300039437 | Ga0436365_0530789 | Ga0436365_0530789_379_1668 | 429 |
| 13 | 3300050511 | nmdc:mga08y16_111418_c1 | nmdc:mga08y16_111418_c1_1262_2551 | 429 |
| 14 | 3300050515 | nmdc:mga0a205_104401_c1 | nmdc:mga0a205_104401_c1_181_1470 | 429 |
| 15 | 3300005355 | Ga0070671_100108754 | Ga0070671_1001087542 | 431 |
| 16 | 3300049579 | Ga0501043_0040814 | Ga0501043_0040814_993_2438 | 435 |
| 17 | 3300049581 | Ga0501047_0011050 | Ga0501047_0011050_6056_7501 | 435 |
| 18 | 3300049586 | Ga0501070_0002689 | Ga0501070_0002689_3684_5129 | 435 |
| 19 | 3300005327 | Ga0070658_10072700 | Ga0070658_100727002 | 443 |
| 20 | 3300050510 | nmdc:mga06r32_49738_c1 | nmdc:mga06r32_49738_c1_353_1726 | 443 |
| 21 | 3300026121 | Ga0207683_10022209 | Ga0207683_100222091 | 444 |
| 22 | 3300046684 | Ga0495669_0022288 | Ga0495669_0022288_250_1668 | 445 |
| 23 | 3300006178 | Ga0075367_10027875 | Ga0075367_100278754 | 446 |
| 24 | 3300050515 | nmdc:mga0a205_123175_c1 | nmdc:mga0a205_123175_c1_323_1741 | 446 |
| 25 | 3300006847 | Ga0075431_100037787 | Ga0075431_1000377871 | 451 |
| 26 | 3300009147 | Ga0114129_10217453 | Ga0114129_102174532 | 451 |
| 27 | 3300050510 | nmdc:mga06r32_9145_c1 | nmdc:mga06r32_9145_c1_4536_5954 | 451 |
| 28 | 3300005338 | Ga0068868_100063110 | Ga0068868_1000631102 | 459 |
| 29 | 3300005345 | Ga0070692_10022020 | Ga0070692_100220203 | 459 |
| 30 | 3300005356 | Ga0070674_100007889 | Ga0070674_1000078894 | 459 |
| 31 | 3300005438 | Ga0070701_10006245 | Ga0070701_100062455 | 459 |
| 32 | 3300005441 | Ga0070700_100083625 | Ga0070700_1000836252 | 459 |
| 33 | 3300005455 | Ga0070663_100020314 | Ga0070663_1000203142 | 459 |
| 34 | 3300005615 | Ga0070702_100052787 | Ga0070702_1000527872 | 459 |
| 35 | 3300005617 | Ga0068859_100011419 | Ga0068859_1000114192 | 459 |
| 36 | 3300005841 | Ga0068863_100060018 | Ga0068863_1000600182 | 459 |
| 37 | 3300006038 | Ga0075365_10013654 | Ga0075365_100136545 | 459 |
| 38 | 3300006051 | Ga0075364_10023268 | Ga0075364_100232684 | 459 |
| 39 | 3300006177 | Ga0075362_10007009 | Ga0075362_100070093 | 459 |
| 40 | 3300006178 | Ga0075367_10020830 | Ga0075367_100208303 | 459 |
| 41 | 3300006195 | Ga0075366_10011987 | Ga0075366_100119873 | 459 |
| 42 | 3300006880 | Ga0075429_100030053 | Ga0075429_1000300532 | 459 |
| 43 | 3300006881 | Ga0068865_100006573 | Ga0068865_1000065732 | 459 |
| 44 | 3300006931 | Ga0097620_100011419 | Ga0097620_1000114199 | 459 |
| 45 | 3300009094 | Ga0111539_10000712 | Ga0111539_100007122 | 459 |
| 46 | 3300014968 | Ga0157379_10025965 | Ga0157379_100259652 | 459 |
| 47 | 3300025926 | Ga0207659_10031900 | Ga0207659_100319002 | 459 |
| 48 | 3300025937 | Ga0207669_10012400 | Ga0207669_100124002 | 459 |
| 49 | 3300025940 | Ga0207691_10144160 | Ga0207691_101441602 | 459 |
| 50 | 3300026023 | Ga0207677_10008196 | Ga0207677_100081962 | 459 |
| 51 | 3300026075 | Ga0207708_10163602 | Ga0207708_101636022 | 459 |
| 52 | 3300026089 | Ga0207648_10012875 | Ga0207648_100128754 | 459 |
| 53 | 3300026118 | Ga0207675_100090142 | Ga0207675_1000901423 | 459 |
| 54 | 3300027907 | Ga0207428_10000060 | Ga0207428_1000006090 | 459 |
| 55 | 3300049576 | Ga0501040_0067945 | Ga0501040_0067945_204_1676 | 459 |
| 56 | 3300049588 | Ga0501072_0051708 | Ga0501072_0051708_763_2235 | 459 |
| 57 | 3300049593 | Ga0501077_0032877 | Ga0501077_0032877_188_1660 | 459 |
| 58 | 3300050493 | nmdc:mga0k408_13675_c1 | nmdc:mga0k408_13675_c1_498_1916 | 459 |
| 59 | 3300050495 | nmdc:mga04h51_11859_c1 | nmdc:mga04h51_11859_c1_430_1848 | 459 |
| 60 | 3300050508 | nmdc:mga09592_43543_c1 | nmdc:mga09592_43543_c1_575_1993 | 459 |
| 61 | 3300050509 | nmdc:mga0qj67_191896_c1 | nmdc:mga0qj67_191896_c1_221_1639 | 459 |
| 62 | 3300061734 | Ga0530510_0029307 | Ga0530510_0029307_2310_3782 | 459 |
| 63 | 3300010375 | Ga0105239_10018729 | Ga0105239_100187292 | 460 |
| 64 | 3300031995 | Ga0307409_100133434 | Ga0307409_1001334342 | 461 |
| 65 | 3300050510 | nmdc:mga06r32_144222_c1 | nmdc:mga06r32_144222_c1_432_1850 | 461 |
| 66 | 3300009148 | Ga0105243_10006424 | Ga0105243_100064246 | 464 |
| 67 | 3300031548 | Ga0307408_100012033 | Ga0307408_1000120332 | 465 |
| 68 | 3300031728 | Ga0316578_10014793 | Ga0316578_100147932 | 465 |
| 69 | 3300031731 | Ga0307405_10038392 | Ga0307405_100383922 | 465 |
| 70 | 3300031852 | Ga0307410_10004850 | Ga0307410_100048503 | 465 |
| 71 | 3300031852 | Ga0307410_10010888 | Ga0307410_100108883 | 465 |
| 72 | 3300031903 | Ga0307407_10000779 | Ga0307407_1000077910 | 465 |
| 73 | 3300031903 | Ga0307407_10001386 | Ga0307407_100013864 | 465 |
| 74 | 3300031911 | Ga0307412_10001388 | Ga0307412_100013889 | 465 |
| 75 | 3300031911 | Ga0307412_10036452 | Ga0307412_100364522 | 465 |
| 76 | 3300031995 | Ga0307409_100005117 | Ga0307409_1000051173 | 465 |
| 77 | 3300031995 | Ga0307409_100017915 | Ga0307409_1000179153 | 465 |
| 78 | 3300032002 | Ga0307416_100006175 | Ga0307416_1000061753 | 465 |
| 79 | 3300032002 | Ga0307416_100056626 | Ga0307416_1000566262 | 465 |
| 80 | 3300032004 | Ga0307414_10007918 | Ga0307414_100079183 | 465 |
| 81 | 3300032005 | Ga0307411_10000808 | Ga0307411_100008083 | 465 |
| 82 | 3300032005 | Ga0307411_10006131 | Ga0307411_100061313 | 465 |
| 83 | 3300032126 | Ga0307415_100002183 | Ga0307415_1000021833 | 465 |
| 84 | 3300032126 | Ga0307415_100013786 | Ga0307415_1000137863 | 465 |
| 85 | 3300036712 | Ga0316584_0000236 | Ga0316584_0000236_3723_5267 | 465 |
| 86 | 3300044712 | Ga0453684_0056705 | Ga0453684_0056705_2844_4253 | 465 |
| 87 | 3300006846 | Ga0075430_100028689 | Ga0075430_1000286895 | 466 |
| 88 | 3300050509 | nmdc:mga0qj67_23278_c1 | nmdc:mga0qj67_23278_c1_766_2214 | 466 |
| 89 | 3300005327 | Ga0070658_10012959 | Ga0070658_100129595 | 467 |
| 90 | 3300025909 | Ga0207705_10027553 | Ga0207705_100275532 | 467 |
| 91 | 3300048908 | Ga0496105_0111224 | Ga0496105_0111224_760_2178 | 468 |
| 92 | 3300005468 | Ga0070707_100000117 | Ga0070707_1000001178 | 469 |
| 93 | 3300009094 | Ga0111539_10120494 | Ga0111539_101204943 | 469 |
| 94 | 3300021441 | Ga0213871_10021631 | Ga0213871_100216311 | 469 |
| 95 | 3300025292 | Ga0209676_1000126 | Ga0209676_100012671 | 469 |
| 96 | 3300025298 | Ga0209050_1004710 | Ga0209050_10047105 | 469 |
| 97 | 3300025922 | Ga0207646_10000239 | Ga0207646_1000023951 | 469 |
| 98 | 3300035398 | Ga0316574_0020399 | Ga0316574_0020399_1128_2540 | 469 |
| 99 | 3300044656 | Ga0466969_0004470 | Ga0466969_0004470_210_1751 | 469 |
| 100 | 3300005340 | Ga0070689_100003757 | Ga0070689_1000037577 | 470 |
| 101 | 3300005549 | Ga0070704_100106825 | Ga0070704_1001068251 | 470 |
| 102 | 3300005577 | Ga0068857_100055134 | Ga0068857_1000551342 | 470 |
| 103 | 3300005617 | Ga0068859_100007916 | Ga0068859_1000079166 | 470 |
| 104 | 3300006844 | Ga0075428_100004773 | Ga0075428_1000047737 | 470 |
| 105 | 3300006852 | Ga0075433_10021351 | Ga0075433_100213514 | 470 |
| 106 | 3300006880 | Ga0075429_100007756 | Ga0075429_1000077564 | 470 |
| 107 | 3300006931 | Ga0097620_100007916 | Ga0097620_1000079166 | 470 |
| 108 | 3300009147 | Ga0114129_10036971 | Ga0114129_100369715 | 470 |
| 109 | 3300025922 | Ga0207646_10047755 | Ga0207646_100477554 | 470 |
| 110 | 3300025936 | Ga0207670_10005379 | Ga0207670_100053794 | 470 |
| 111 | 3300025981 | Ga0207640_10128430 | Ga0207640_101284301 | 470 |
| 112 | 3300026116 | Ga0207674_10043974 | Ga0207674_100439743 | 470 |
| 113 | 3300028380 | Ga0268265_10029837 | Ga0268265_100298372 | 470 |
| 114 | 3300035113 | Ga0373936_0021625 | Ga0373936_0021625_1068_2480 | 470 |
| 115 | 3300035172 | Ga0373955_0086999 | Ga0373955_0086999_246_1658 | 470 |
| 116 | 3300036401 | Ga0373937_0037831 | Ga0373937_0037831_1610_3022 | 470 |
| 117 | 3300050507 | nmdc:mga05p37_135345_c1 | nmdc:mga05p37_135345_c1_671_2158 | 470 |
| 118 | 3300050508 | nmdc:mga09592_8267_c1 | nmdc:mga09592_8267_c1_2934_4349 | 470 |
| 119 | 3300050515 | nmdc:mga0a205_58662_c1 | nmdc:mga0a205_58662_c1_1746_3209 | 470 |
| 120 | 3300005334 | Ga0068869_100027510 | Ga0068869_1000275103 | 471 |
| 121 | 3300005340 | Ga0070689_100051542 | Ga0070689_1000515422 | 471 |
| 122 | 3300005367 | Ga0070667_100078588 | Ga0070667_1000785882 | 471 |
| 123 | 3300005471 | Ga0070698_100004362 | Ga0070698_1000043622 | 471 |
| 124 | 3300005471 | Ga0070698_100042458 | Ga0070698_1000424582 | 471 |
| 125 | 3300005548 | Ga0070665_100007841 | Ga0070665_1000078414 | 471 |
| 126 | 3300005549 | Ga0070704_100028151 | Ga0070704_1000281513 | 471 |
| 127 | 3300005841 | Ga0068863_100059781 | Ga0068863_1000597812 | 471 |
| 128 | 3300006028 | Ga0070717_10004958 | Ga0070717_100049582 | 471 |
| 129 | 3300006846 | Ga0075430_100159343 | Ga0075430_1001593432 | 471 |
| 130 | 3300009098 | Ga0105245_10000036 | Ga0105245_1000003640 | 471 |
| 131 | 3300013297 | Ga0157378_10037041 | Ga0157378_100370412 | 471 |
| 132 | 3300014969 | Ga0157376_10072081 | Ga0157376_100720812 | 471 |
| 133 | 3300025921 | Ga0207652_10077172 | Ga0207652_100771722 | 471 |
| 134 | 3300025927 | Ga0207687_10000044 | Ga0207687_1000004410 | 471 |
| 135 | 3300025935 | Ga0207709_10087843 | Ga0207709_100878432 | 471 |
| 136 | 3300025936 | Ga0207670_10018935 | Ga0207670_100189352 | 471 |
| 137 | 3300025949 | Ga0207667_10209744 | Ga0207667_102097442 | 471 |
| 138 | 3300028379 | Ga0268266_10003331 | Ga0268266_100033318 | 471 |
| 139 | 3300028653 | Ga0265323_10006634 | Ga0265323_100066343 | 471 |
| 140 | 3300028794 | Ga0307515_10042327 | Ga0307515_100423272 | 471 |
| 141 | 3300028800 | Ga0265338_10021873 | Ga0265338_100218735 | 471 |
| 142 | 3300031456 | Ga0307513_10002594 | Ga0307513_1000259419 | 471 |
| 143 | 3300031507 | Ga0307509_10000037 | Ga0307509_10000037115 | 471 |
| 144 | 3300031507 | Ga0307509_10023537 | Ga0307509_100235374 | 471 |
| 145 | 3300031616 | Ga0307508_10036998 | Ga0307508_100369982 | 471 |
| 146 | 3300031730 | Ga0307516_10018879 | Ga0307516_100188794 | 471 |
| 147 | 3300035090 | Ga0373949_0002546 | Ga0373949_0002546_2392_3807 | 471 |
| 148 | 3300035113 | Ga0373936_0000033 | Ga0373936_0000033_38490_39905 | 471 |
| 149 | 3300035241 | Ga0373961_0000033 | Ga0373961_0000033_17833_19248 | 471 |
| 150 | 3300037312 | Ga0395899_0033227 | Ga0395899_0033227_675_2093 | 471 |
| 151 | 3300037466 | Ga0395898_0043032 | Ga0395898_0043032_2547_3965 | 471 |
| 152 | 3300037466 | Ga0395898_0205931 | Ga0395898_0205931_354_1772 | 471 |
| 153 | 3300038443 | Ga0395901_0047514 | Ga0395901_0047514_314_1732 | 471 |
| 154 | 3300039437 | Ga0436365_1589206 | Ga0436365_1589206_381_1796 | 471 |
| 155 | 3300047472 | Ga0495686_0018279 | Ga0495686_0018279_3044_4459 | 471 |
| 156 | 3300049571 | Ga0501034_0135341 | Ga0501034_0135341_157_1575 | 471 |
| 157 | 3300049585 | Ga0501069_0045410 | Ga0501069_0045410_69_1484 | 471 |
| 158 | 3300049586 | Ga0501070_0018967 | Ga0501070_0018967_3868_5286 | 471 |
| 159 | 3300049586 | Ga0501070_0115025 | Ga0501070_0115025_775_2193 | 471 |
| 160 | 3300049744 | Ga0501083_0040699 | Ga0501083_0040699_700_2115 | 471 |
| 161 | 3300049823 | Ga0501044_0015742 | Ga0501044_0015742_5588_7006 | 471 |
| 162 | 3300050508 | nmdc:mga09592_63502_c1 | nmdc:mga09592_63502_c1_957_2372 | 471 |
| 163 | 3300053095 | Ga0500640_024572 | Ga0500640_024572_102_1517 | 471 |
| 164 | 3300053119 | Ga0500595_000640 | Ga0500595_000640_13877_15292 | 471 |
| 165 | 3300053123 | Ga0500614_000242 | Ga0500614_000242_8776_10191 | 471 |
| 166 | 3300005343 | Ga0070687_100017112 | Ga0070687_1000171122 | 472 |
| 167 | 3300031901 | Ga0307406_10000801 | Ga0307406_1000080110 | 472 |
| 168 | 3300049665 | Ga0501227_000287 | Ga0501227_000287_4106_5527 | 472 |
| 169 | 3300049667 | Ga0501230_001369 | Ga0501230_001369_874_2295 | 472 |
| 170 | 3300049705 | Ga0501225_0005661 | Ga0501225_0005661_903_2324 | 472 |
| 171 | 3300042004 | Ga0439445_0020909 | Ga0439445_0020909_103_1533 | 473 |
| 172 | 3300050510 | nmdc:mga06r32_80118_c1 | nmdc:mga06r32_80118_c1_339_1775 | 478 |
| 173 | 3300005444 | Ga0070694_100001946 | Ga0070694_1000019468 | 479 |
| 174 | 3300005985 | Ga0081539_10002474 | Ga0081539_1000247423 | 479 |
| 175 | 3300003203 | JGI25406J46586_10005441 | JGI25406J46586_100054412 | 480 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3eoe-assembly1.cif.gz_B | crystal structure of pyruvate kinase from toxoplasma gondii, 55.m00007 | 0.953 | 3 | 471 |
| 3eoe-assembly1.cif.gz_A | crystal structure of pyruvate kinase from toxoplasma gondii, 55.m00007 | 0.9528 | 3 | 471 |
| 7ueh-assembly4.cif.gz_F | pyruvate kinase from zymomonas mobilis | 0.9528 | 3 | 470 |
| 3eoe-assembly1.cif.gz_C | crystal structure of pyruvate kinase from toxoplasma gondii, 55.m00007 | 0.9511 | 3 | 471 |
| 7z4r-assembly1.cif.gz_A | plasmodium falciparum pyruvate kinase mutant - c343a | 0.9498 | 3 | 471 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0R0KTV1_6_81_3.20.20.60 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains | 1.002 | 252 | 325 | 3.20.20.60 |
| af_Q0DS91_57_151_2.40.33.10 | Mainly Beta;Beta Barrel;M1 Pyruvate Kinase; Domain 3;PK beta-barrel domain-like | 0.9862 | 73 | 161 | 2.40.33.10 |
| 1e0uB03 | Mainly Beta;Beta Barrel;M1 Pyruvate Kinase; Domain 3;PK beta-barrel domain-like | 0.9857 | 71 | 167 | 2.40.33.10 |
| 5wrpA01 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains | 0.9828 | 3 | 330 | 3.20.20.60 |
| 1pkyC03 | Mainly Beta;Beta Barrel;M1 Pyruvate Kinase; Domain 3;PK beta-barrel domain-like | 0.9805 | 107 | 167 | 2.40.33.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2N7XSP8-F1-model_v4 | Pyruvate kinase (EC 2.7.1.40) | 0.9984 | 263 | 335 |
GO:0000287
GO:0004743 GO:0005524 GO:0016301 GO:0030955 |
| AF-A0A7S3HA66-F1-model_v4 | Pyruvate kinase (EC 2.7.1.40) | 0.9956 | 216 | 334 |
GO:0000287
GO:0004743 GO:0005524 GO:0016301 GO:0030955 |
| AF-A0A7S2YIU0-F1-model_v4 | Pyruvate kinase (EC 2.7.1.40) | 0.9904 | 216 | 318 |
GO:0000287
GO:0004743 GO:0005524 GO:0016301 GO:0030955 |
| AF-A0A5J9W142-F1-model_v4 | Pyruvate kinase (EC 2.7.1.40) | 0.9882 | 231 | 335 |
GO:0000287
GO:0004743 GO:0005524 GO:0015979 GO:0016301 GO:0030955 |
| AF-X1NQB2-F1-model_v4 | pyruvate kinase (EC 2.7.1.40) | 0.9875 | 26 | 281 |
GO:0000287
GO:0004743 GO:0005524 GO:0016301 GO:0030955 |
Predicted Structure (AlphaFold2)
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