F212486

General Info

Members Datasets Scaffolds Average Seq Length
151 114 302 378

Family's Representative Sequence

Representative Sequence 3300046491|Ga0495584_0045234|Ga0495584_0045234_675_1967
Length 430
Sequence VREHRRGAAVRREDPDGRVRVDRGASGLGDVGTVEAVFRAEYGRVVATLIRDLRDIDLAEDALQDALATALVAWPRAGVPSSPGAWLTVTARRKAIDRLRRDRRLAELVTELEQQTEEAVDEETIPDERLSLIFTCCHPALSPDTQVALTLRLVGGLTTCEIARAFLVAEETLAQRIVRAKAKIRTAGIPYRVPPDHLLPDRLAAVLAVVYLIFNEGYSATSGDALTRPDLLAESIRLGGILAALMPDEAEVLGLEALLLLQASRTRARSGPDGELVLLDDQDRALWDRDLIARGVALLDRALALRRPGPYQLQAAIAALHSQAREAGETDWTQIALLYAELARLQPSPVVELNRAVAVAMADGPAAGLELLDDLPLERYHLFHSARADLLRREGRVDEARAAYERARELVTNEPERAFLSRRIAELEPA

Samples

Sample ID Description Type Environment
1 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
16 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
27 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
28 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
42 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
43 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
49 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
50 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
51 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
52 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
53 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
54 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
57 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
58 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
59 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
60 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
61 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
64 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
65 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
68 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
69 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
72 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
73 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
76 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
77 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
78 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
79 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
83 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
88 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
89 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
90 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
91 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
92 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
95 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
96 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
97 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
98 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
99 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
100 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
104 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
107 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
108 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
109 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
110 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
111 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
112 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
113 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
114 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.35
Metatranscriptomes 0
Isolates 2.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.97
Nodule 0
Rhizoplane 4.64
Rhizosphere 85.43
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495584_0045234 3300046491 Bacteria 2221
2 JGI25406J46586_10020141 3300003203 Bacteria 2703
3 Ga0068868_100081491 3300005338 Bacteria 2594
4 Ga0070714_100014420 3300005435 Bacteria 6349
5 Ga0070711_100000472 3300005439 Bacteria 21003
6 Ga0070705_100008566 3300005440 Bacteria 5066
7 Ga0070708_100007250 3300005445 Bacteria 8863
8 Ga0070708_100140907 3300005445 Bacteria 2236
9 Ga0070706_100029848 3300005467 Bacteria 5022
10 Ga0070706_100063965 3300005467 Bacteria 3400
11 Ga0070707_100095597 3300005468 Bacteria 2877
12 Ga0070698_100018602 3300005471 Bacteria 7313
13 Ga0070679_100011995 3300005530 Bacteria 8272
14 Ga0081539_10003095 3300005985 Bacteria 21371
15 Ga0070717_10067847 3300006028 Bacteria 2969
16 Ga0075364_10155083 3300006051 Bacteria 1544
17 Ga0075432_10013109 3300006058 Bacteria 2817
18 Ga0075370_10007771 3300006353 Bacteria 5478
19 Ga0075428_100023962 3300006844 Bacteria 6754
20 Ga0075428_100207727 3300006844 Bacteria 2116
21 Ga0075431_100101627 3300006847 Bacteria 2967
22 Ga0075431_100117657 3300006847 Bacteria 2742
23 Ga0075431_100381049 3300006847 Bacteria 1414
24 Ga0075433_10023206 3300006852 Bacteria 5219
25 Ga0075433_10113003 3300006852 Bacteria 2409
26 Ga0075429_100010588 3300006880 Bacteria 7978
27 Ga0075429_100029581 3300006880 Bacteria 4757
28 Ga0075436_100002185 3300006914 Bacteria 13485
29 Ga0075435_100013362 3300007076 Bacteria 6106
30 Ga0075435_100104101 3300007076 Bacteria 2354
31 Ga0111539_10030890 3300009094 Bacteria 6511
32 Ga0114129_10005740 3300009147 Bacteria 17586
33 Ga0114129_10006422 3300009147 Bacteria 16671
34 Ga0114129_10011927 3300009147 Bacteria 12359
35 Ga0114129_10018686 3300009147 Bacteria 9871
36 Ga0114129_10212302 3300009147 Bacteria 2616
37 Ga0114129_10337343 3300009147 Bacteria 2000
38 Ga0114129_10463860 3300009147 Bacteria 1660
39 Ga0105249_10030337 3300009553 Bacteria 4888
40 Ga0105035_101047 3300009988 Bacteria 1828
41 Ga0157380_10238934 3300014326 Bacteria 1637
42 Ga0207699_10064742 3300025906 Bacteria 2213
43 Ga0207684_10145917 3300025910 Bacteria 2035
44 Ga0207684_10174634 3300025910 Bacteria 1852
45 Ga0207707_10054002 3300025912 Bacteria 3497
46 Ga0207693_10008182 3300025915 Bacteria 8569
47 Ga0207693_10014089 3300025915 Bacteria 6438
48 Ga0207663_10006974 3300025916 Bacteria 5826
49 Ga0207652_10029151 3300025921 Bacteria 4612
50 Ga0207646_10140988 3300025922 Bacteria 2171
51 Ga0207700_10000001 3300025928 Bacteria 1122509
52 Ga0207664_10100510 3300025929 Bacteria 2388
53 Ga0207709_10080953 3300025935 Bacteria 2092
54 Ga0207674_10286429 3300026116 Bacteria 1596
55 Ga0207675_100003989 3300026118 Bacteria 14318
56 Ga0207698_10045733 3300026142 Bacteria 3300
57 Ga0207428_10005317 3300027907 Bacteria 12005
58 Ga0207428_10013175 3300027907 Bacteria 7239
59 Ga0307405_10009351 3300031731 Bacteria 5020
60 Ga0307413_10014264 3300031824 Bacteria 4028
61 Ga0307410_10005225 3300031852 Bacteria 6838
62 Ga0307410_10013551 3300031852 Bacteria 4761
63 Ga0307412_10005537 3300031911 Bacteria 7092
64 Ga0307409_100005393 3300031995 Bacteria 7349
65 Ga0307416_100006115 3300032002 Bacteria 7496
66 Ga0307414_10011465 3300032004 Bacteria 5200
67 Ga0307414_10064695 3300032004 Bacteria 2605
68 Ga0307411_10004055 3300032005 Bacteria 6936
69 Ga0373952_0010338 3300035092 Bacteria 1802
70 Ga0373945_0011912 3300035116 Bacteria 2882
71 Ga0373943_0075222 3300035170 Bacteria 1719
72 Ga0373946_0013682 3300035171 Bacteria 3053
73 Ga0373947_0000918 3300035725 Bacteria 17889
74 Ga0373937_0105182 3300036401 Bacteria 2623
75 Ga0373925_0030031 3300037068 Bacteria 3988
76 Ga0395899_0013324 3300037312 Bacteria 6290
77 Ga0395900_0011014 3300037418 Bacteria 9243
78 Ga0395898_0228052 3300037466 Bacteria 1776
79 Ga0395905_0029971 3300037471 Bacteria 5128
80 Ga0395905_0084495 3300037471 Bacteria 2974
81 Ga0436364_0657384 3300037853 Bacteria 6943
82 Ga0395901_0021914 3300038443 Bacteria 6549
83 Ga0395901_0055764 3300038443 Bacteria 4110
84 Ga0395901_0133893 3300038443 Bacteria 2604
85 Ga0395901_0160080 3300038443 Bacteria 2364
86 Ga0395901_0297338 3300038443 Bacteria 1674
87 Ga0436365_0456406 3300039437 Bacteria 6949
88 Ga0436363_0003354 3300039450 Bacteria 1479
89 Ga0453683_0185800 3300044673 Bacteria 1319
90 Ga0466957_0150067 3300044842 Bacteria 1507
91 Ga0466958_0031401 3300045836 Bacteria 3157
92 Ga0466958_0062969 3300045836 Bacteria 2262
93 Ga0495592_0203776 3300046454 Bacteria 1333
94 Ga0495641_0000516 3300046461 Bacteria 32427
95 Ga0495651_0141235 3300046462 Bacteria 1746
96 Ga0495582_0024996 3300046473 Bacteria 3271
97 Ga0495664_0123404 3300046477 Bacteria 1567
98 Ga0495594_0002439 3300046499 Bacteria 9685
99 Ga0495628_0055673 3300046516 Bacteria 3115
100 Ga0495652_0222300 3300046529 Bacteria 1418
101 Ga0495587_0116651 3300046536 Bacteria 1531
102 Ga0495645_0109196 3300046543 Bacteria 1958
103 Ga0495600_0137743 3300046809 Bacteria 1585
104 Ga0495674_0071929 3300047319 Bacteria 2984
105 Ga0495676_0012467 3300047321 Bacteria 7654
106 Ga0495680_0091366 3300047322 Bacteria 2282
107 Ga0495684_0095052 3300047471 Bacteria 2256
108 Ga0495686_0093992 3300047472 Bacteria 1818
109 Ga0496104_0001596 3300048907 Bacteria 19511
110 Ga0496105_0014938 3300048908 Bacteria 6181
111 Ga0496108_0279170 3300048911 Bacteria 1454
112 Ga0496110_0021721 3300048913 Bacteria 5439
113 Ga0496111_0036356 3300048914 Bacteria 3521
114 Ga0496115_0000028 3300048918 Bacteria 141457
115 Ga0496115_0000047 3300048918 Bacteria 111160
116 Ga0496116_0006122 3300048919 Bacteria 11005
117 Ga0496119_0005540 3300048922 Bacteria 12028
118 Ga0496124_0055589 3300048927 Bacteria 3345
119 Ga0501042_0297323 3300049578 Bacteria 1166
120 Ga0501067_0005164 3300049583 Bacteria 7260
121 Ga0501069_0016643 3300049585 Bacteria 3951
122 Ga0501075_0110333 3300049591 Bacteria 2091
123 Ga0501079_0145063 3300049741 Bacteria 1850
124 nmdc:mga0yw44_42966_c1 3300050492 Bacteria 2698
125 nmdc:mga06z11_53226_c1 3300050494 Bacteria 2081
126 nmdc:mga07m45_53412_c1 3300050496 Bacteria 2283
127 nmdc:mga05p37_167883_c1 3300050507 Bacteria 2678
128 nmdc:mga05p37_193709_c1 3300050507 Bacteria 2466
129 nmdc:mga05p37_34831_c1 3300050507 Bacteria 6168
130 nmdc:mga05p37_48797_c1 3300050507 Bacteria 5206
131 nmdc:mga05p37_70734_c1 3300050507 Bacteria 4292
132 nmdc:mga09592_11730_c1 3300050508 Bacteria 7128
133 nmdc:mga09592_67112_c1 3300050508 Bacteria 3042
134 nmdc:mga0qj67_25757_c1 3300050509 Bacteria 4548
135 nmdc:mga0qj67_6536_c1 3300050509 Bacteria 8566
136 nmdc:mga06r32_22448_c1 3300050510 Bacteria 5835
137 nmdc:mga06r32_253872_c1 3300050510 Bacteria 1746
138 nmdc:mga06r32_3226_c1 3300050510 Bacteria 14596
139 nmdc:mga06r32_96716_c1 3300050510 Bacteria 2892
140 nmdc:mga08y16_186459_c1 3300050511 Bacteria 2153
141 nmdc:mga08y16_24254_c1 3300050511 Bacteria 6402
142 nmdc:mga08y16_82903_c1 3300050511 Bacteria 3343
143 nmdc:mga0rr50_53726_c1 3300050513 Bacteria 2997
144 nmdc:mga08x19_11226_c1 3300050514 Bacteria 5392
145 nmdc:mga0a205_233091_c1 3300050515 Bacteria 1724
146 Ga0495612_0039321 3300053078 Bacteria 1924
147 Ga0500595_009065 3300053119 Bacteria 4038
148 2547405619 2547132111 Bacteria 8013147
149 2862511109 2862507626 Bacteria 9425308
150 2899366691 2899359706 Bacteria 10940472
151 2929226244 2929219909 Bacteria 6984360
152 Ga0495584_0045234
153 JGI25406J46586_10020141
154 Ga0068868_100081491
155 Ga0070714_100014420
156 Ga0070711_100000472
157 Ga0070705_100008566
158 Ga0070708_100007250
159 Ga0070708_100140907
160 Ga0070706_100029848
161 Ga0070706_100063965
162 Ga0070707_100095597
163 Ga0070698_100018602
164 Ga0070679_100011995
165 Ga0081539_10003095
166 Ga0070717_10067847
167 Ga0075364_10155083
168 Ga0075432_10013109
169 Ga0075370_10007771
170 Ga0075428_100023962
171 Ga0075428_100207727
172 Ga0075431_100101627
173 Ga0075431_100117657
174 Ga0075431_100381049
175 Ga0075433_10023206
176 Ga0075433_10113003
177 Ga0075429_100010588
178 Ga0075429_100029581
179 Ga0075436_100002185
180 Ga0075435_100013362
181 Ga0075435_100104101
182 Ga0111539_10030890
183 Ga0114129_10005740
184 Ga0114129_10006422
185 Ga0114129_10011927
186 Ga0114129_10018686
187 Ga0114129_10212302
188 Ga0114129_10337343
189 Ga0114129_10463860
190 Ga0105249_10030337
191 Ga0105035_101047
192 Ga0157380_10238934
193 Ga0207699_10064742
194 Ga0207684_10145917
195 Ga0207684_10174634
196 Ga0207707_10054002
197 Ga0207693_10008182
198 Ga0207693_10014089
199 Ga0207663_10006974
200 Ga0207652_10029151
201 Ga0207646_10140988
202 Ga0207700_10000001
203 Ga0207664_10100510
204 Ga0207709_10080953
205 Ga0207674_10286429
206 Ga0207675_100003989
207 Ga0207698_10045733
208 Ga0207428_10005317
209 Ga0207428_10013175
210 Ga0307405_10009351
211 Ga0307413_10014264
212 Ga0307410_10005225
213 Ga0307410_10013551
214 Ga0307412_10005537
215 Ga0307409_100005393
216 Ga0307416_100006115
217 Ga0307414_10011465
218 Ga0307414_10064695
219 Ga0307411_10004055
220 Ga0373952_0010338
221 Ga0373945_0011912
222 Ga0373943_0075222
223 Ga0373946_0013682
224 Ga0373947_0000918
225 Ga0373937_0105182
226 Ga0373925_0030031
227 Ga0395899_0013324
228 Ga0395900_0011014
229 Ga0395898_0228052
230 Ga0395905_0029971
231 Ga0395905_0084495
232 Ga0436364_0657384
233 Ga0395901_0021914
234 Ga0395901_0055764
235 Ga0395901_0133893
236 Ga0395901_0160080
237 Ga0395901_0297338
238 Ga0436365_0456406
239 Ga0436363_0003354
240 Ga0453683_0185800
241 Ga0466957_0150067
242 Ga0466958_0031401
243 Ga0466958_0062969
244 Ga0495592_0203776
245 Ga0495641_0000516
246 Ga0495651_0141235
247 Ga0495582_0024996
248 Ga0495664_0123404
249 Ga0495594_0002439
250 Ga0495628_0055673
251 Ga0495652_0222300
252 Ga0495587_0116651
253 Ga0495645_0109196
254 Ga0495600_0137743
255 Ga0495674_0071929
256 Ga0495676_0012467
257 Ga0495680_0091366
258 Ga0495684_0095052
259 Ga0495686_0093992
260 Ga0496104_0001596
261 Ga0496105_0014938
262 Ga0496108_0279170
263 Ga0496110_0021721
264 Ga0496111_0036356
265 Ga0496115_0000028
266 Ga0496115_0000047
267 Ga0496116_0006122
268 Ga0496119_0005540
269 Ga0496124_0055589
270 Ga0501042_0297323
271 Ga0501067_0005164
272 Ga0501069_0016643
273 Ga0501075_0110333
274 Ga0501079_0145063
275 nmdc:mga0yw44_42966_c1
276 nmdc:mga06z11_53226_c1
277 nmdc:mga07m45_53412_c1
278 nmdc:mga05p37_167883_c1
279 nmdc:mga05p37_193709_c1
280 nmdc:mga05p37_34831_c1
281 nmdc:mga05p37_48797_c1
282 nmdc:mga05p37_70734_c1
283 nmdc:mga09592_11730_c1
284 nmdc:mga09592_67112_c1
285 nmdc:mga0qj67_25757_c1
286 nmdc:mga0qj67_6536_c1
287 nmdc:mga06r32_22448_c1
288 nmdc:mga06r32_253872_c1
289 nmdc:mga06r32_3226_c1
290 nmdc:mga06r32_96716_c1
291 nmdc:mga08y16_186459_c1
292 nmdc:mga08y16_24254_c1
293 nmdc:mga08y16_82903_c1
294 nmdc:mga0rr50_53726_c1
295 nmdc:mga08x19_11226_c1
296 nmdc:mga0a205_233091_c1
297 Ga0495612_0039321
298 Ga0500595_009065
299 2547405619
300 2862511109
301 2899366691
302 2929226244

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20239

DUF6596

Family of unknown function (DUF6596)

202

303

0.99

PF08281

Sigma70_r4_2

Sigma-70, region 4

131

184

0.95

PF04542

Sigma70_r2

Sigma-70 region 2

37

105

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.8871 307 367
3upv-assembly1.cif.gz_A tpr2b-domain:phsp70-complex of yeast sti1 0.8749 288 382
3vep-assembly4.cif.gz_H crystal structure of sigd4 in complex with its negative regulator rsda 0.8732 100 161
3kd7-assembly2.cif.gz_B designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) 0.8682 288 368
2kcl-assembly1.cif.gz_A solution nmr structure of tetratricopeptide repeat domain protein sru_0103 from salinibacter ruber, northeast structural genomics consortium (nesg) target srr115c 0.8637 305 383
ID Description Score Start End Superfamily
af_Q337E1_42_200_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9176 288 383 1.25.40.10
af_Q4DF91_471_692_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9149 289 383 1.25.40.10
af_K7KUY6_39_195_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.892 288 383 1.25.40.10
af_P0AGM5_187_259_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8907 313 381 1.25.40.10
af_A0A1D6MTC7_43_119_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8907 306 367 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A7W1M2D5-F1-model_v4 DUF6596 domain-containing protein 0.9921 211 384
AF-A0A2V7EJQ2-F1-model_v4 RNA polymerase subunit sigma-24 0.9818 270 383
AF-A0A0K8QDE4-F1-model_v4 Uncharacterized protein R00370 0.9793 179 383
AF-A0A519FTM8-F1-model_v4 RNA polymerase sigma factor 0.9789 195 383
AF-A0A5R8MEV5-F1-model_v4 RNA polymerase subunit sigma-24 0.9779 275 383

Map