F437912

General Info

Members Datasets Scaffolds Average Seq Length
412 252 333 600

Family's Representative Sequence

Representative Sequence 3300048920|Ga0496117_0000750|Ga0496117_0000750_14404_16209
Length 590
Sequence MQNIRNIAIIAHVDHGKTTLVDKILHFTNLFRDNDGTGDLILDNNDLERERGITIVAKNVSVEYKGVKINVIDTPGHADFGGEVERVLKMADGVVLLVDAFEGPMPQTRFVTQKALSLGLKPLVVVNKVDKENCRPEEVYENVFDLFFSLDATEEQLAFPVLYGSSKHGWMSTDWKEKKEDVSELLDAIISHFPPSPFVEGTLQMQITSLDYSTFVGRIAGQPISLVKRDGKIVKSRVKELHTFEGLGRRRVEEVKCGDICAVVGIEGFDIGDTIADFENPEQLEVISIDEPTMNMLFTINNSPFFGKEGKLVTSRHIHDRLQKELEKNLALRVVPTESPDAWLVYGRGILHLSVLIETMRREGYELQVGQPQVILKEIDGKKCEPIEVLVVDVPAEVSGKVIELVTQRKGELLVMETKGEMQHLEFEIPSRGIIGLRNNVLTATAGEAVMAHRLKGYEPWRGTIPGRLHGVLISLDKGTTTAYSIDKLQDRGKFFVDPGVDIYEGQILGEHIRDNDLTINIVKGKQLTNMRASGTDDNTRIAPAIKFSLEESMEYIQADEYIEVTPQSIRLRKIYLTENERKVNAKKFQ

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
3 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
4 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
5 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
6 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
7 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
8 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
9 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
10 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
11 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
12 2738541283 Pedobacter sp. OK701 Isolate Unclassified
13 2738541284 Pedobacter sp. YR016 Isolate Unclassified
14 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
15 2738541302 Pedobacter sp. CF074 Isolate Unclassified
16 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
17 2738543023 Pedobacter sp. OK628 Isolate Unclassified
18 2739367651 Pedobacter sp. OK291 Isolate Unclassified
19 2739367656 Pedobacter sp. CF523 Isolate Unclassified
20 2739367663 Pedobacter sp. YR510 Isolate Unclassified
21 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
22 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
23 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
24 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
25 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
26 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
27 2818991437 Pedobacter terrae 518 Isolate Unclassified
28 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
29 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
30 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
31 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
32 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
33 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
34 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
35 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
36 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
37 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
38 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
39 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
40 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
41 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
42 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
43 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
44 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
45 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
46 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
47 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
48 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
49 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
50 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
51 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
52 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
53 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
54 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
55 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
56 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
57 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
58 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
59 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
60 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
61 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
62 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
63 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
64 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
65 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
66 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
67 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
68 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
69 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
70 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
71 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
72 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
73 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
74 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
75 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
76 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
77 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
78 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
79 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
80 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
81 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
82 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
83 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
84 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
85 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
86 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
87 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
88 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
89 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
90 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
91 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
92 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
93 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
94 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
95 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
96 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
97 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
98 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
99 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
100 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
101 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
102 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
103 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
104 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
105 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
106 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
107 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
108 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
109 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
110 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
111 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
112 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
113 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
114 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
115 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
116 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
117 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
118 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
119 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
120 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
121 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
122 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
123 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
124 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
125 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
126 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
127 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
128 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
129 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
130 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
131 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
132 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
133 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
134 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
135 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
136 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
137 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
138 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
139 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
140 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
141 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
142 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
143 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
144 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
145 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
146 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
164 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
165 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
166 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
167 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
168 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
169 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
170 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
171 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
172 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
173 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
174 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
175 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
176 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
177 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
178 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
179 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
180 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
181 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
182 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
183 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
184 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
185 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
186 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
187 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
188 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
189 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
190 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
191 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
192 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
193 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
194 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
195 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
196 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
197 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
198 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
199 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
200 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
201 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
202 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
203 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
204 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
205 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
206 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
207 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
208 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
209 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
210 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
211 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
212 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
213 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
214 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
215 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
216 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
217 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
218 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
219 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
220 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
221 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
222 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
223 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
224 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
225 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
226 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
227 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
228 3300049541 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
229 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
230 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
231 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
232 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
233 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
234 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
235 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
236 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
237 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
238 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
239 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
240 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
241 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
242 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
243 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
244 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
245 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
246 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
247 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
248 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
249 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
250 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere
251 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
252 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.34
Metatranscriptomes 0.49
Isolates 19.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.5
Nodule 0.97
Rhizoplane 0.24
Rhizosphere 76.21
Stem 0
Stem Tuber 0
Unclassified 14.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1311939 2162886007 Bacteria 2102
2 SwRhRL2b_contig_1574393 2162886007 Bacteria 3218
3 JGI24736J21556_1001393 3300001904 Bacteria 4426
4 JGI24736J21556_1001531 3300001904 Bacteria 4212
5 JGI24740J21852_10022081 3300001979 Bacteria 2196
6 JGI24737J22298_10000433 3300001990 Bacteria 14325
7 JGI24737J22298_10000797 3300001990 Bacteria 11180
8 JGI24735J21928_10000032 3300002067 Bacteria 72360
9 JGI25162J39368_1000016 3300002737 Bacteria 288734
10 JGI25162J39368_1001951 3300002737 Bacteria 9291
11 JGI25164J39214_1001888 3300002772 Bacteria 3908
12 JGI25152J39213_1000043 3300002773 Bacteria 87508
13 JGI25150J39212_1000023 3300002774 Bacteria 130663
14 JGI25151J46595_10000082 3300003187 Bacteria 130832
15 JGI25165J46597_1000742 3300003214 Bacteria 25223
16 JGI25153J46596_10000060 3300003215 Bacteria 131744
17 rootH1_10045152 3300003316 Bacteria 16291
18 rootH2_10010159 3300003320 Bacteria 33853
19 Ga0055536_1000006 3300003781 Bacteria 347733
20 Ga0055530_10003121 3300003791 Bacteria 9789
21 Ga0065714_10064490 3300005288 Bacteria 50332
22 Ga0065714_10066539 3300005288 Bacteria 6663
23 Ga0065714_10080777 3300005288 Bacteria 2380
24 Ga0065714_10086654 3300005288 Bacteria 2091
25 Ga0065704_10001341 3300005289 Bacteria 8244
26 Ga0065704_10086590 3300005289 Bacteria 3101
27 Ga0065715_10013925 3300005293 Bacteria 2236
28 Ga0070658_10000008 3300005327 Bacteria 319912
29 Ga0070658_10011598 3300005327 Bacteria 7068
30 Ga0070676_10000728 3300005328 Bacteria 16117
31 Ga0070660_100013982 3300005339 Bacteria 5775
32 Ga0070660_100057542 3300005339 Bacteria 3012
33 Ga0070671_100022326 3300005355 Bacteria 5168
34 Ga0070673_100087011 3300005364 Bacteria 2546
35 Ga0070659_100002204 3300005366 Bacteria 13856
36 Ga0070659_100068216 3300005366 Bacteria 2821
37 Ga0070713_100033117 3300005436 Bacteria 4136
38 Ga0070662_100000090 3300005457 Bacteria 49884
39 Ga0068867_100002572 3300005459 Bacteria 12790
40 Ga0068867_100060793 3300005459 Bacteria 2803
41 Ga0070679_100012662 3300005530 Bacteria 8068
42 Ga0070665_100000061 3300005548 Bacteria 222138
43 Ga0068855_100000895 3300005563 Bacteria 36960
44 Ga0068855_100010971 3300005563 Bacteria 10934
45 Ga0068855_100080344 3300005563 Bacteria 3781
46 Ga0068855_100108578 3300005563 Bacteria 3187
47 Ga0068856_100000385 3300005614 Bacteria 48447
48 Ga0068856_100004666 3300005614 Bacteria 13611
49 Ga0068852_100008148 3300005616 Bacteria 7694
50 Ga0075366_10000261 3300006195 Bacteria 23266
51 Ga0097621_100002156 3300006237 Bacteria 13466
52 Ga0068871_100000491 3300006358 Bacteria 27057
53 Ga0068871_100136737 3300006358 Bacteria 2082
54 Ga0068865_100000070 3300006881 Bacteria 53670
55 Ga0099824_1002777 3300006942 Bacteria 25651
56 Ga0079104_1000178 3300006946 Bacteria 90393
57 Ga0105244_10000095 3300009036 Bacteria 93295
58 Ga0105240_10000082 3300009093 Bacteria 195184
59 Ga0105240_10009767 3300009093 Bacteria 13547
60 Ga0105240_10113154 3300009093 Bacteria 3280
61 Ga0105243_10000016 3300009148 Bacteria 235629
62 Ga0105241_10009818 3300009174 Bacteria 7034
63 Ga0105241_10014433 3300009174 Bacteria 5784
64 Ga0105237_10000310 3300009545 Bacteria 67887
65 Ga0105237_10000394 3300009545 Bacteria 62227
66 Ga0105237_10000762 3300009545 Bacteria 44209
67 Ga0105237_10005080 3300009545 Bacteria 14953
68 Ga0105237_10021932 3300009545 Bacteria 6559
69 Ga0105238_10004702 3300009551 Bacteria 13503
70 Ga0105239_10000004 3300010375 Bacteria 532483
71 Ga0105239_10000049 3300010375 Bacteria 177578
72 Ga0105239_10001982 3300010375 Bacteria 26624
73 Ga0105239_10008305 3300010375 Bacteria 11834
74 Ga0105239_10022140 3300010375 Bacteria 7005
75 Ga0105239_10145260 3300010375 Bacteria 2645
76 Ga0157373_10000001 3300013100 Bacteria 864756
77 Ga0157373_10000057 3300013100 Bacteria 99697
78 Ga0157373_10001332 3300013100 Bacteria 18906
79 Ga0157373_10001726 3300013100 Bacteria 16609
80 Ga0157373_10004893 3300013100 Bacteria 10082
81 Ga0157373_10013523 3300013100 Bacteria 5985
82 Ga0157371_10000027 3300013102 Bacteria 269243
83 Ga0157371_10000107 3300013102 Bacteria 126477
84 Ga0157371_10003204 3300013102 Bacteria 15028
85 Ga0157371_10032473 3300013102 Bacteria 3756
86 Ga0157370_10000261 3300013104 Bacteria 66927
87 Ga0157370_10000620 3300013104 Bacteria 44173
88 Ga0157370_10003108 3300013104 Bacteria 19656
89 Ga0157370_10008980 3300013104 Bacteria 10728
90 Ga0157370_10019753 3300013104 Bacteria 6745
91 Ga0157370_10025584 3300013104 Bacteria 5842
92 Ga0157370_10055623 3300013104 Bacteria 3769
93 Ga0157369_10000053 3300013105 Bacteria 162962
94 Ga0157369_10001422 3300013105 Bacteria 29374
95 Ga0157369_10044868 3300013105 Bacteria 4809
96 Ga0157369_10152838 3300013105 Bacteria 2439
97 Ga0157374_10002405 3300013296 Bacteria 15782
98 Ga0157374_10002839 3300013296 Bacteria 14531
99 Ga0157378_10004071 3300013297 Bacteria 12914
100 Ga0163162_10000012 3300013306 Bacteria 292674
101 Ga0163162_10000078 3300013306 Bacteria 89842
102 Ga0163162_10043016 3300013306 Bacteria 4522
103 Ga0157372_10000238 3300013307 Bacteria 60988
104 Ga0157372_10011582 3300013307 Bacteria 9384
105 Ga0157372_10013761 3300013307 Bacteria 8644
106 Ga0157372_10038152 3300013307 Bacteria 5301
107 Ga0157372_10176373 3300013307 Bacteria 2474
108 Ga0157375_10026393 3300013308 Bacteria 5412
109 Ga0157375_10060725 3300013308 Bacteria 3751
110 Ga0157380_10000003 3300014326 Bacteria 224643
111 Ga0182008_10000020 3300014497 Bacteria 228333
112 Ga0182008_10000053 3300014497 Bacteria 102934
113 Ga0182008_10000334 3300014497 Bacteria 37000
114 Ga0182006_1000203 3300015261 Bacteria 61122
115 Ga0182006_1000270 3300015261 Bacteria 46578
116 Ga0182006_1001644 3300015261 Bacteria 13198
117 Ga0182006_1001768 3300015261 Bacteria 12532
118 Ga0182006_1003954 3300015261 Bacteria 7413
119 Ga0182006_1016389 3300015261 Bacteria 3162
120 Ga0182006_1022442 3300015261 Bacteria 2623
121 Ga0182007_10000005 3300015262 Bacteria 442702
122 Ga0183373_1007 3300015682 Bacteria 282776
123 Ga0163161_10000015 3300017792 Bacteria 250785
124 Ga0163161_10001764 3300017792 Bacteria 15793
125 Ga0163161_10002223 3300017792 Bacteria 13977
126 Ga0213872_10004548 3300021361 Bacteria 7334
127 Ga0207427_100122 3300025231 Bacteria 99064
128 Ga0209437_100048 3300025233 Bacteria 405107
129 Ga0209437_100119 3300025233 Bacteria 206549
130 Ga0207425_1000051 3300025245 Bacteria 166795
131 Ga0209129_1000121 3300025258 Bacteria 135404
132 Ga0209233_1000029 3300025261 Bacteria 641642
133 Ga0209233_1002665 3300025261 Bacteria 6465
134 Ga0209455_1001148 3300025272 Bacteria 12787
135 Ga0209676_1000039 3300025292 Bacteria 443158
136 Ga0209025_1000160 3300025294 Bacteria 166795
137 Ga0209758_1000147 3300025297 Bacteria 166795
138 Ga0209050_1000033 3300025298 Bacteria 442615
139 Ga0207655_1000012 3300025728 Bacteria 640488
140 Ga0207647_10000018 3300025904 Bacteria 124816
141 Ga0207647_10000071 3300025904 Bacteria 79170
142 Ga0207645_10000172 3300025907 Bacteria 51794
143 Ga0207705_10000026 3300025909 Bacteria 256051
144 Ga0207705_10030636 3300025909 Bacteria 3839
145 Ga0207654_10001791 3300025911 Bacteria 11158
146 Ga0207695_10000053 3300025913 Bacteria 396740
147 Ga0207671_10000366 3300025914 Bacteria 64454
148 Ga0207671_10000925 3300025914 Bacteria 36841
149 Ga0207671_10001165 3300025914 Bacteria 31349
150 Ga0207671_10002491 3300025914 Bacteria 19655
151 Ga0207671_10002661 3300025914 Bacteria 18743
152 Ga0207671_10020780 3300025914 Bacteria 4993
153 Ga0207657_10071746 3300025919 Bacteria 2931
154 Ga0207694_10010289 3300025924 Bacteria 7050
155 Ga0207644_10011725 3300025931 Bacteria 5802
156 Ga0207690_10000216 3300025932 Bacteria 43848
157 Ga0207690_10026000 3300025932 Bacteria 3684
158 Ga0207706_10000718 3300025933 Bacteria 34581
159 Ga0207709_10000020 3300025935 Bacteria 392366
160 Ga0207704_10000342 3300025938 Bacteria 21647
161 Ga0207667_10000274 3300025949 Bacteria 71328
162 Ga0207667_10000394 3300025949 Bacteria 58926
163 Ga0207667_10018977 3300025949 Bacteria 7689
164 Ga0207667_10090033 3300025949 Bacteria 3171
165 Ga0207703_10068230 3300026035 Bacteria 2930
166 Ga0207702_10015109 3300026078 Bacteria 6401
167 Ga0207702_10076063 3300026078 Bacteria 2901
168 Ga0207648_10000658 3300026089 Bacteria 38677
169 Ga0207683_10008888 3300026121 Bacteria 8564
170 Ga0207698_10097325 3300026142 Bacteria 2428
171 Ga0209281_1000299 3300027111 Bacteria 90106
172 Ga0209489_112561 3300027361 Bacteria 7572
173 Ga0268266_10000053 3300028379 Bacteria 295181
174 Ga0307517_10000198 3300028786 Bacteria 102181
175 Ga0307515_10001308 3300028794 Bacteria 56577
176 Ga0307515_10005765 3300028794 Bacteria 25025
177 Ga0265338_10000563 3300028800 Bacteria 65172
178 Ga0316177_1095610 3300030731 Bacteria 7211
179 Ga0316183_1025240 3300030742 Bacteria 70534
180 Ga0265327_10000370 3300031251 Bacteria 84921
181 Ga0265327_10004465 3300031251 Bacteria 12371
182 Ga0265327_10015049 3300031251 Bacteria 5024
183 Ga0265316_10002088 3300031344 Bacteria 21010
184 Ga0307408_100000054 3300031548 Bacteria 146208
185 Ga0307408_100001480 3300031548 Bacteria 17434
186 Ga0307408_100002318 3300031548 Bacteria 13499
187 Ga0307408_100008370 3300031548 Bacteria 6830
188 Ga0307405_10000001 3300031731 Bacteria 1731270
189 Ga0307405_10000085 3300031731 Bacteria 39496
190 Ga0307405_10024765 3300031731 Bacteria 3434
191 Ga0307410_10000149 3300031852 Bacteria 25144
192 Ga0307406_10000372 3300031901 Bacteria 25856
193 Ga0307407_10000001 3300031903 Bacteria 570048
194 Ga0307407_10000369 3300031903 Bacteria 13510
195 Ga0307412_10000001 3300031911 Bacteria 822691
196 Ga0307412_10088265 3300031911 Bacteria 2163
197 Ga0307409_100019157 3300031995 Bacteria 4625
198 Ga0307416_100000008 3300032002 Bacteria 401343
199 Ga0307414_10000012 3300032004 Bacteria 322675
200 Ga0307414_10000499 3300032004 Bacteria 20468
201 Ga0307414_10000575 3300032004 Bacteria 19130
202 Ga0307414_10001307 3300032004 Bacteria 12873
203 Ga0307414_10002588 3300032004 Bacteria 9518
204 Ga0307414_10015111 3300032004 Bacteria 4652
205 Ga0307414_10058595 3300032004 Bacteria 2714
206 Ga0307411_10000008 3300032005 Bacteria 321575
207 Ga0307411_10049872 3300032005 Bacteria 2723
208 Ga0307510_10000417 3300033180 Bacteria 40763
209 Ga0307510_10040486 3300033180 Bacteria 5115
210 Ga0316584_0064118 3300036712 Bacteria 2751
211 Ga0395899_0000027 3300037312 Bacteria 337387
212 Ga0395899_0000254 3300037312 Bacteria 70643
213 Ga0395899_0002947 3300037312 Bacteria 13640
214 Ga0395900_0000195 3300037418 Bacteria 97204
215 Ga0395900_0000275 3300037418 Bacteria 78207
216 Ga0395898_0039235 3300037466 Bacteria 4688
217 Ga0395905_0000001 3300037471 Bacteria 2037079
218 Ga0395905_0000254 3300037471 Bacteria 79953
219 Ga0395905_0005229 3300037471 Bacteria 13283
220 Ga0395901_0000644 3300038443 Bacteria 40364
221 Ga0395901_0003818 3300038443 Bacteria 15186
222 Ga0400488_13042 3300038741 Bacteria 1852
223 Ga0436361_0179845 3300039447 Bacteria 11031
224 Ga0451837_1851137 3300041494 Bacteria 5045
225 Ga0451577_0000010 3300042876 Bacteria 616686
226 Ga0451577_0000159 3300042876 Bacteria 148522
227 Ga0451577_0001728 3300042876 Bacteria 28150
228 Ga0451577_0030865 3300042876 Bacteria 4839
229 Ga0451577_0054380 3300042876 Bacteria 3574
230 Ga0451577_0074632 3300042876 Bacteria 3024
231 Ga0451577_0131831 3300042876 Bacteria 2242
232 Ga0453683_0000111 3300044673 Bacteria 122663
233 Ga0453683_0000594 3300044673 Bacteria 40002
234 Ga0453683_0001699 3300044673 Bacteria 18345
235 Ga0453683_0014464 3300044673 Bacteria 5121
236 Ga0453683_0020808 3300044673 Bacteria 4191
237 Ga0453683_0053969 3300044673 Bacteria 2515
238 Ga0453684_0000091 3300044712 Bacteria 387720
239 Ga0453684_0000130 3300044712 Bacteria 331761
240 Ga0453684_0000432 3300044712 Bacteria 170746
241 Ga0453684_0001437 3300044712 Bacteria 68001
242 Ga0453684_0002066 3300044712 Bacteria 51033
243 Ga0453684_0002932 3300044712 Bacteria 40002
244 Ga0453684_0006119 3300044712 Bacteria 23180
245 Ga0453684_0009030 3300044712 Bacteria 17593
246 Ga0453684_0010520 3300044712 Bacteria 15795
247 Ga0453684_0011273 3300044712 Bacteria 15038
248 Ga0453684_0013384 3300044712 Bacteria 13335
249 Ga0453684_0014992 3300044712 Bacteria 12309
250 Ga0453684_0017032 3300044712 Bacteria 11288
251 Ga0453684_0033111 3300044712 Bacteria 7211
252 Ga0453684_0039346 3300044712 Bacteria 6446
253 Ga0453684_0078711 3300044712 Bacteria 4124
254 Ga0453684_0093438 3300044712 Bacteria 3705
255 Ga0453684_0136016 3300044712 Bacteria 2942
256 Ga0453684_0224013 3300044712 Bacteria 2176
257 Ga0451576_0000113 3300045051 Bacteria 208644
258 Ga0451576_0000353 3300045051 Bacteria 110215
259 Ga0451576_0001464 3300045051 Bacteria 40002
260 Ga0451576_0001636 3300045051 Bacteria 37434
261 Ga0451576_0002696 3300045051 Bacteria 25812
262 Ga0451576_0008983 3300045051 Bacteria 11645
263 Ga0451576_0011135 3300045051 Bacteria 10259
264 Ga0451576_0011211 3300045051 Bacteria 10211
265 Ga0451576_0012426 3300045051 Bacteria 9565
266 Ga0451576_0017354 3300045051 Bacteria 7917
267 Ga0451576_0048973 3300045051 Bacteria 4435
268 Ga0451576_0057141 3300045051 Bacteria 4079
269 Ga0495585_0000037 3300046492 Bacteria 133335
270 Ga0495585_0000241 3300046492 Bacteria 56727
271 Ga0495583_0024641 3300046506 Bacteria 3019
272 Ga0495606_0000060 3300046507 Bacteria 185907
273 Ga0495606_0037365 3300046507 Bacteria 3299
274 Ga0495610_0000108 3300046512 Bacteria 96839
275 Ga0495610_0000129 3300046512 Bacteria 83051
276 Ga0495616_0001861 3300046513 Bacteria 14276
277 Ga0495630_0110388 3300046517 Bacteria 2083
278 Ga0495643_0003233 3300046522 Bacteria 12073
279 Ga0495648_0002824 3300046524 Bacteria 15618
280 Ga0495609_0006732 3300046538 Bacteria 5828
281 Ga0495633_0000006 3300046558 Bacteria 326774
282 Ga0495633_0011790 3300046558 Bacteria 4690
283 Ga0495633_0035996 3300046558 Bacteria 2374
284 Ga0495668_0000054 3300046616 Bacteria 203960
285 Ga0495625_0000191 3300046660 Bacteria 97363
286 Ga0495625_0000355 3300046660 Bacteria 69806
287 Ga0495625_0000548 3300046660 Bacteria 55064
288 Ga0495625_0017365 3300046660 Bacteria 5635
289 Ga0495625_0080863 3300046660 Bacteria 2262
290 Ga0495661_0000946 3300046665 Bacteria 26340
291 Ga0495661_0003229 3300046665 Bacteria 12157
292 Ga0495649_0000061 3300046694 Bacteria 97338
293 Ga0495680_0061901 3300047322 Bacteria 2878
294 Ga0495687_003171 3300047443 Bacteria 12240
295 Ga0495687_005916 3300047443 Bacteria 7651
296 Ga0495673_0041603 3300047469 Bacteria 2068
297 Ga0495686_0007995 3300047472 Bacteria 7842
298 Ga0495686_0049795 3300047472 Bacteria 2634
299 Ga0496116_0000004 3300048919 Bacteria 839841
300 Ga0496117_0000750 3300048920 Bacteria 51106
301 Ga0496117_0066083 3300048920 Bacteria 2455
302 Ga0496118_0012233 3300048921 Bacteria 8268
303 Ga0496121_0076335 3300048924 Bacteria 2672
304 Ga0496122_0000876 3300048925 Bacteria 56653
305 Ga0496122_0027132 3300048925 Bacteria 4906
306 Ga0496123_0000777 3300048926 Bacteria 51679
307 Ga0496123_0005962 3300048926 Bacteria 12001
308 Ga0496125_0000012 3300048928 Bacteria 651142
309 Ga0496125_0011657 3300048928 Bacteria 8776
310 Ga0496126_0008593 3300048929 Bacteria 10994
311 Ga0501307_000109 3300049162 Bacteria 3901
312 Ga0495678_009399 3300049459 Bacteria 4841
313 Ga0501325_000478 3300049541 Bacteria 1931
314 Ga0501036_0076003 3300049572 Bacteria 2841
315 Ga0501047_0009897 3300049581 Bacteria 9013
316 Ga0501223_000286 3300049663 Bacteria 12666
317 Ga0501238_000095 3300049671 Bacteria 14076
318 Ga0501266_000004 3300049763 Bacteria 356286
319 Ga0501280_000126 3300049776 Bacteria 19902
320 Ga0501035_0104850 3300049822 Bacteria 2479
321 nmdc:mga0k408_245_c1 3300050493 Bacteria 29347
322 nmdc:mga08y16_46593_c1 3300050511 Bacteria 4539
323 Ga0500646_0003752 3300053090 Bacteria 3887
324 Ga0500646_0004436 3300053090 Bacteria 3557
325 Ga0500651_0000058 3300053093 Bacteria 72493
326 Ga0500641_0000025 3300053096 Bacteria 108050
327 Ga0500608_007731 3300053122 Bacteria 4466
328 Ga0500618_000018 3300053125 Bacteria 163272
329 Ga0500658_0000010 3300053134 Bacteria 248149
330 Ga0500616_0013063 3300053153 Bacteria 4836
331 Ga0500622_0005326 3300053156 Bacteria 7755
332 Ga0500622_0005648 3300053156 Bacteria 7453
333 Ga0500624_001390 3300053157 Bacteria 4027

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046517 Ga0495630_0110388 Ga0495630_0110388_29_1633 527
2 3300038741 Ga0400488_13042 Ga0400488_13042_91_1758 552
3 3300044712 Ga0453684_0136016 Ga0453684_0136016_40_1713 557
4 3300044712 Ga0453684_0033111 Ga0453684_0033111_2230_3978 578
5 3300013307 Ga0157372_10176373 Ga0157372_101763731 584
6 3300031251 Ga0265327_10015049 Ga0265327_100150494 585
7 3300037312 Ga0395899_0000254 Ga0395899_0000254_26019_27878 586
8 3300038443 Ga0395901_0003818 Ga0395901_0003818_103_1911 586
9 3300048920 Ga0496117_0000750 Ga0496117_0000750_14404_16209 587
10 3300048925 Ga0496122_0027132 Ga0496122_0027132_2837_4642 587
11 3300048926 Ga0496123_0005962 Ga0496123_0005962_4362_6167 587
12 3300031251 Ga0265327_10000370 Ga0265327_1000037078 588
13 3300036712 Ga0316584_0064118 Ga0316584_0064118_602_2371 589
14 3300044712 Ga0453684_0011273 Ga0453684_0011273_5647_7428 591
15 3300045051 Ga0451576_0057141 Ga0451576_0057141_1561_3342 591
16 3300044712 Ga0453684_0000091 Ga0453684_0000091_345367_347148 592
17 3300037471 Ga0395905_0000254 Ga0395905_0000254_6418_8226 593
18 iso_pu_bacteria 2738541284 2738763308 593
19 iso_pu_bacteria 2852627209 2852630672 593
20 iso_pu_bacteria 2890804823 2890807307 593
21 iso_pu_bacteria 2513020052 2513232290 594
22 iso_pu_bacteria 2519899754 2520881876 594
23 iso_pu_bacteria 2585427687 2586207793 594
24 iso_pu_bacteria 2599185184 2599481391 594
25 iso_pu_bacteria 2643221600 2644009779 594
26 iso_pu_bacteria 2643221667 2644374265 594
27 iso_pu_bacteria 2643221716 2644640592 594
28 iso_pu_bacteria 2643221725 2644683734 594
29 iso_pu_bacteria 2721755487 2722725726 594
30 iso_pu_bacteria 2738541279 2738735100 594
31 iso_pu_bacteria 2738541283 2738756067 594
32 iso_pu_bacteria 2738541285 2738767676 594
33 iso_pu_bacteria 2738541302 2738854624 594
34 iso_pu_bacteria 2738543007 2739216682 594
35 iso_pu_bacteria 2738543023 2739304153 594
36 iso_pu_bacteria 2739367651 2739587143 594
37 iso_pu_bacteria 2739367656 2739615233 594
38 iso_pu_bacteria 2739367663 2739645640 594
39 iso_pu_bacteria 2739367857 2740002504 594
40 iso_pu_bacteria 2739367858 2740007320 594
41 iso_pu_bacteria 2739367866 2740033871 594
42 iso_pu_bacteria 2775506987 2776616086 594
43 iso_pu_bacteria 2802428842 2802652379 594
44 iso_pu_bacteria 2816332280 2817417443 594
45 iso_pu_bacteria 2818991437 2819547600 594
46 iso_pu_bacteria 2833640130 2833642816 594
47 iso_pu_bacteria 2839989709 2839989807 594
48 iso_pu_bacteria 2842722452 2842726618 594
49 iso_pu_bacteria 2842903701 2842904755 594
50 iso_pu_bacteria 2842909656 2842911462 594
51 iso_pu_bacteria 2849281842 2849284194 594
52 iso_pu_bacteria 2852623160 2852625759 594
53 iso_pu_bacteria 2857613821 2857615851 594
54 iso_pu_bacteria 2857618242 2857620406 594
55 iso_pu_bacteria 2857627736 2857627799 594
56 iso_pu_bacteria 2881247448 2881250173 594
57 iso_pu_bacteria 2881359912 2881360842 594
58 iso_pu_bacteria 2884634485 2884637108 594
59 iso_pu_bacteria 2884933994 2884935716 594
60 iso_pu_bacteria 2890737413 2890739057 594
61 iso_pu_bacteria 2896317667 2896321314 594
62 iso_pu_bacteria 2896344016 2896346212 594
63 iso_pu_bacteria 2898713307 2898714398 594
64 iso_pu_bacteria 2902048731 2902051322 594
65 iso_pu_bacteria 2903895155 2903897824 594
66 iso_pu_bacteria 2904419702 2904422043 594
67 iso_pu_bacteria 2904445276 2904449628 594
68 iso_pu_bacteria 2904555929 2904559118 594
69 iso_pu_bacteria 2904780799 2904782487 594
70 iso_pu_bacteria 2910245624 2910248998 594
71 iso_pu_bacteria 2919177583 2919178347 594
72 iso_pu_bacteria 2919186247 2919190630 594
73 iso_pu_bacteria 2919191525 2919192149 594
74 iso_pu_bacteria 2919437846 2919440520 594
75 iso_pu_bacteria 2919509842 2919512305 594
76 iso_pu_bacteria 2919683626 2919686008 594
77 iso_pu_bacteria 2919692658 2919697286 594
78 iso_pu_bacteria 2928078545 2928083315 594
79 iso_pu_bacteria 2928147474 2928152775 594
80 iso_pu_bacteria 2929150217 2929154707 594
81 iso_pu_bacteria 2932082852 2932088263 594
82 iso_pu_bacteria 2939664404 2939669160 594
83 iso_pu_bacteria 2945997725 2946003081 594
84 iso_pu_bacteria 2954016120 2954019940 594
85 iso_pu_bacteria 2958458903 2958459052 594
86 iso_pu_bacteria 2958512119 2958515911 594
87 iso_pu_bacteria 2965320100 2965322263 594
88 iso_pu_bacteria 2977268062 2977271537 594
89 iso_pu_bacteria 3003233435 3003236892 594
90 iso_pu_bacteria 8036736890 8036738752 594
91 iso_pu_bacteria 8054307821 8054310504 594
92 iso_pu_bacteria 8055419101 8055423067 594
93 iso_pu_bacteria 8055588893 8055591403 594
94 iso_pu_bacteria 8055592153 8055596576 594
95 iso_pu_bacteria 8056440228 8056442090 594
96 iso_pu_bacteria 2977232053 2977235665 595
97 3300005289 Ga0065704_10001341 Ga0065704_100013414 597
98 3300013100 Ga0157373_10004893 Ga0157373_100048939 597
99 3300014497 Ga0182008_10000020 Ga0182008_10000020133 597
100 3300015261 Ga0182006_1001644 Ga0182006_100164417 597
101 3300031548 Ga0307408_100000054 Ga0307408_10000005445 597
102 3300031911 Ga0307412_10000001 Ga0307412_10000001264 597
103 3300032004 Ga0307414_10002588 Ga0307414_100025883 597
104 3300041494 Ga0451837_1851137 Ga0451837_1851137_336_2129 597
105 3300042876 Ga0451577_0054380 Ga0451577_0054380_1270_3090 597
106 3300045051 Ga0451576_0008983 Ga0451576_0008983_2589_4382 597
107 3300047322 Ga0495680_0061901 Ga0495680_0061901_1072_2868 597
108 3300049162 Ga0501307_000109 Ga0501307_000109_2013_3809 597
109 3300053093 Ga0500651_0000058 Ga0500651_0000058_61851_63650 597
110 2162886007 SwRhRL2b_contig_1311939 SwRhRL2b_0038.00007730 598
111 2162886007 SwRhRL2b_contig_1574393 SwRhRL2b_0804.00006090 598
112 3300001904 JGI24736J21556_1001393 JGI24736J21556_10013933 598
113 3300001904 JGI24736J21556_1001531 JGI24736J21556_10015312 598
114 3300001979 JGI24740J21852_10022081 JGI24740J21852_100220812 598
115 3300001990 JGI24737J22298_10000433 JGI24737J22298_100004334 598
116 3300001990 JGI24737J22298_10000797 JGI24737J22298_100007977 598
117 3300002067 JGI24735J21928_10000032 JGI24735J21928_100000326 598
118 3300002737 JGI25162J39368_1000016 JGI25162J39368_1000016166 598
119 3300002737 JGI25162J39368_1001951 JGI25162J39368_10019514 598
120 3300002772 JGI25164J39214_1001888 JGI25164J39214_10018883 598
121 3300002773 JGI25152J39213_1000043 JGI25152J39213_100004371 598
122 3300002774 JGI25150J39212_1000023 JGI25150J39212_100002355 598
123 3300003187 JGI25151J46595_10000082 JGI25151J46595_1000008255 598
124 3300003214 JGI25165J46597_1000742 JGI25165J46597_100074225 598
125 3300003215 JGI25153J46596_10000060 JGI25153J46596_1000006056 598
126 3300003316 rootH1_10045152 rootH1_1004515213 598
127 3300003320 rootH2_10010159 rootH2_1001015932 598
128 3300003781 Ga0055536_1000006 Ga0055536_100000638 598
129 3300003791 Ga0055530_10003121 Ga0055530_100031219 598
130 3300005288 Ga0065714_10064490 Ga0065714_1006449027 598
131 3300005288 Ga0065714_10066539 Ga0065714_100665396 598
132 3300005288 Ga0065714_10080777 Ga0065714_100807772 598
133 3300005288 Ga0065714_10086654 Ga0065714_100866541 598
134 3300005289 Ga0065704_10086590 Ga0065704_100865901 598
135 3300005293 Ga0065715_10013925 Ga0065715_100139251 598
136 3300005327 Ga0070658_10000008 Ga0070658_10000008231 598
137 3300005327 Ga0070658_10011598 Ga0070658_100115982 598
138 3300005328 Ga0070676_10000728 Ga0070676_100007285 598
139 3300005339 Ga0070660_100013982 Ga0070660_1000139825 598
140 3300005339 Ga0070660_100057542 Ga0070660_1000575422 598
141 3300005355 Ga0070671_100022326 Ga0070671_1000223266 598
142 3300005364 Ga0070673_100087011 Ga0070673_1000870112 598
143 3300005366 Ga0070659_100002204 Ga0070659_1000022048 598
144 3300005366 Ga0070659_100068216 Ga0070659_1000682163 598
145 3300005436 Ga0070713_100033117 Ga0070713_1000331172 598
146 3300005457 Ga0070662_100000090 Ga0070662_10000009010 598
147 3300005459 Ga0068867_100002572 Ga0068867_1000025724 598
148 3300005459 Ga0068867_100060793 Ga0068867_1000607933 598
149 3300005530 Ga0070679_100012662 Ga0070679_1000126621 598
150 3300005548 Ga0070665_100000061 Ga0070665_100000061177 598
151 3300005563 Ga0068855_100000895 Ga0068855_1000008959 598
152 3300005563 Ga0068855_100010971 Ga0068855_10001097110 598
153 3300005563 Ga0068855_100080344 Ga0068855_1000803443 598
154 3300005563 Ga0068855_100108578 Ga0068855_1001085782 598
155 3300005614 Ga0068856_100000385 Ga0068856_10000038510 598
156 3300005614 Ga0068856_100004666 Ga0068856_1000046664 598
157 3300005616 Ga0068852_100008148 Ga0068852_1000081485 598
158 3300006195 Ga0075366_10000261 Ga0075366_100002616 598
159 3300006237 Ga0097621_100002156 Ga0097621_1000021565 598
160 3300006358 Ga0068871_100000491 Ga0068871_10000049127 598
161 3300006358 Ga0068871_100136737 Ga0068871_1001367371 598
162 3300006881 Ga0068865_100000070 Ga0068865_1000000706 598
163 3300006942 Ga0099824_1002777 Ga0099824_10027777 598
164 3300006946 Ga0079104_1000178 Ga0079104_100017877 598
165 3300009036 Ga0105244_10000095 Ga0105244_1000009540 598
166 3300009093 Ga0105240_10000082 Ga0105240_1000008237 598
167 3300009093 Ga0105240_10009767 Ga0105240_100097677 598
168 3300009093 Ga0105240_10113154 Ga0105240_101131541 598
169 3300009148 Ga0105243_10000016 Ga0105243_1000001635 598
170 3300009174 Ga0105241_10009818 Ga0105241_100098183 598
171 3300009174 Ga0105241_10014433 Ga0105241_100144332 598
172 3300009545 Ga0105237_10000310 Ga0105237_1000031045 598
173 3300009545 Ga0105237_10000394 Ga0105237_1000039435 598
174 3300009545 Ga0105237_10000762 Ga0105237_1000076216 598
175 3300009545 Ga0105237_10005080 Ga0105237_100050809 598
176 3300009545 Ga0105237_10021932 Ga0105237_100219323 598
177 3300009551 Ga0105238_10004702 Ga0105238_100047025 598
178 3300010375 Ga0105239_10000004 Ga0105239_100000047 598
179 3300010375 Ga0105239_10000049 Ga0105239_10000049127 598
180 3300010375 Ga0105239_10001982 Ga0105239_1000198211 598
181 3300010375 Ga0105239_10008305 Ga0105239_100083058 598
182 3300010375 Ga0105239_10022140 Ga0105239_100221405 598
183 3300010375 Ga0105239_10145260 Ga0105239_101452601 598
184 3300013100 Ga0157373_10000001 Ga0157373_10000001161 598
185 3300013100 Ga0157373_10000057 Ga0157373_1000005769 598
186 3300013100 Ga0157373_10001332 Ga0157373_100013325 598
187 3300013100 Ga0157373_10001726 Ga0157373_1000172615 598
188 3300013100 Ga0157373_10013523 Ga0157373_100135233 598
189 3300013102 Ga0157371_10000027 Ga0157371_1000002743 598
190 3300013102 Ga0157371_10000107 Ga0157371_1000010713 598
191 3300013102 Ga0157371_10003204 Ga0157371_100032045 598
192 3300013102 Ga0157371_10032473 Ga0157371_100324732 598
193 3300013104 Ga0157370_10000261 Ga0157370_100002616 598
194 3300013104 Ga0157370_10000620 Ga0157370_1000062044 598
195 3300013104 Ga0157370_10003108 Ga0157370_1000310814 598
196 3300013104 Ga0157370_10008980 Ga0157370_100089801 598
197 3300013104 Ga0157370_10019753 Ga0157370_100197535 598
198 3300013104 Ga0157370_10025584 Ga0157370_100255844 598
199 3300013104 Ga0157370_10055623 Ga0157370_100556232 598
200 3300013105 Ga0157369_10000053 Ga0157369_10000053113 598
201 3300013105 Ga0157369_10001422 Ga0157369_100014229 598
202 3300013105 Ga0157369_10044868 Ga0157369_100448682 598
203 3300013105 Ga0157369_10152838 Ga0157369_101528382 598
204 3300013296 Ga0157374_10002405 Ga0157374_1000240510 598
205 3300013296 Ga0157374_10002839 Ga0157374_100028398 598
206 3300013297 Ga0157378_10004071 Ga0157378_100040719 598
207 3300013306 Ga0163162_10000012 Ga0163162_10000012189 598
208 3300013306 Ga0163162_10000078 Ga0163162_1000007811 598
209 3300013306 Ga0163162_10043016 Ga0163162_100430164 598
210 3300013307 Ga0157372_10000238 Ga0157372_100002381 598
211 3300013307 Ga0157372_10011582 Ga0157372_100115822 598
212 3300013307 Ga0157372_10013761 Ga0157372_100137615 598
213 3300013307 Ga0157372_10038152 Ga0157372_100381525 598
214 3300013308 Ga0157375_10026393 Ga0157375_100263934 598
215 3300013308 Ga0157375_10060725 Ga0157375_100607252 598
216 3300014326 Ga0157380_10000003 Ga0157380_10000003161 598
217 3300014497 Ga0182008_10000053 Ga0182008_1000005376 598
218 3300014497 Ga0182008_10000334 Ga0182008_1000033431 598
219 3300015261 Ga0182006_1000203 Ga0182006_100020313 598
220 3300015261 Ga0182006_1000270 Ga0182006_100027039 598
221 3300015261 Ga0182006_1001768 Ga0182006_10017688 598
222 3300015261 Ga0182006_1003954 Ga0182006_10039543 598
223 3300015261 Ga0182006_1016389 Ga0182006_10163892 598
224 3300015261 Ga0182006_1022442 Ga0182006_10224422 598
225 3300015262 Ga0182007_10000005 Ga0182007_10000005302 598
226 3300015682 Ga0183373_1007 Ga0183373_1007177 598
227 3300017792 Ga0163161_10000015 Ga0163161_10000015174 598
228 3300017792 Ga0163161_10001764 Ga0163161_1000176418 598
229 3300017792 Ga0163161_10002223 Ga0163161_100022235 598
230 3300021361 Ga0213872_10004548 Ga0213872_100045487 598
231 3300025231 Ga0207427_100122 Ga0207427_10012262 598
232 3300025233 Ga0209437_100048 Ga0209437_100048234 598
233 3300025233 Ga0209437_100119 Ga0209437_10011982 598
234 3300025245 Ga0207425_1000051 Ga0207425_100005188 598
235 3300025258 Ga0209129_1000121 Ga0209129_100012155 598
236 3300025261 Ga0209233_1000029 Ga0209233_1000029142 598
237 3300025261 Ga0209233_1002665 Ga0209233_10026653 598
238 3300025272 Ga0209455_1001148 Ga0209455_100114813 598
239 3300025292 Ga0209676_1000039 Ga0209676_1000039134 598
240 3300025294 Ga0209025_1000160 Ga0209025_100016072 598
241 3300025297 Ga0209758_1000147 Ga0209758_100014772 598
242 3300025298 Ga0209050_1000033 Ga0209050_1000033315 598
243 3300025728 Ga0207655_1000012 Ga0207655_1000012502 598
244 3300025904 Ga0207647_10000018 Ga0207647_1000001866 598
245 3300025904 Ga0207647_10000071 Ga0207647_1000007169 598
246 3300025907 Ga0207645_10000172 Ga0207645_100001724 598
247 3300025909 Ga0207705_10000026 Ga0207705_10000026232 598
248 3300025909 Ga0207705_10030636 Ga0207705_100306362 598
249 3300025911 Ga0207654_10001791 Ga0207654_1000179111 598
250 3300025913 Ga0207695_10000053 Ga0207695_10000053314 598
251 3300025914 Ga0207671_10000366 Ga0207671_1000036620 598
252 3300025914 Ga0207671_10000925 Ga0207671_100009257 598
253 3300025914 Ga0207671_10001165 Ga0207671_100011655 598
254 3300025914 Ga0207671_10002491 Ga0207671_1000249118 598
255 3300025914 Ga0207671_10002661 Ga0207671_1000266115 598
256 3300025914 Ga0207671_10020780 Ga0207671_100207804 598
257 3300025919 Ga0207657_10071746 Ga0207657_100717462 598
258 3300025924 Ga0207694_10010289 Ga0207694_100102893 598
259 3300025931 Ga0207644_10011725 Ga0207644_100117252 598
260 3300025932 Ga0207690_10000216 Ga0207690_100002164 598
261 3300025932 Ga0207690_10026000 Ga0207690_100260004 598
262 3300025933 Ga0207706_10000718 Ga0207706_1000071814 598
263 3300025935 Ga0207709_10000020 Ga0207709_10000020160 598
264 3300025938 Ga0207704_10000342 Ga0207704_100003426 598
265 3300025949 Ga0207667_10000274 Ga0207667_1000027410 598
266 3300025949 Ga0207667_10000394 Ga0207667_1000039444 598
267 3300025949 Ga0207667_10018977 Ga0207667_100189771 598
268 3300025949 Ga0207667_10090033 Ga0207667_100900332 598
269 3300026035 Ga0207703_10068230 Ga0207703_100682302 598
270 3300026078 Ga0207702_10015109 Ga0207702_100151092 598
271 3300026078 Ga0207702_10076063 Ga0207702_100760632 598
272 3300026089 Ga0207648_10000658 Ga0207648_100006586 598
273 3300026121 Ga0207683_10008888 Ga0207683_100088883 598
274 3300026142 Ga0207698_10097325 Ga0207698_100973251 598
275 3300027111 Ga0209281_1000299 Ga0209281_100029975 598
276 3300027361 Ga0209489_112561 Ga0209489_1125612 598
277 3300028379 Ga0268266_10000053 Ga0268266_1000005327 598
278 3300028786 Ga0307517_10000198 Ga0307517_1000019814 598
279 3300028794 Ga0307515_10001308 Ga0307515_1000130856 598
280 3300028794 Ga0307515_10005765 Ga0307515_1000576520 598
281 3300028800 Ga0265338_10000563 Ga0265338_1000056312 598
282 3300030731 Ga0316177_1095610 Ga0316177_10956105 598
283 3300030742 Ga0316183_1025240 Ga0316183_102524017 598
284 3300031251 Ga0265327_10004465 Ga0265327_100044655 598
285 3300031344 Ga0265316_10002088 Ga0265316_1000208812 598
286 3300031548 Ga0307408_100001480 Ga0307408_1000014808 598
287 3300031548 Ga0307408_100002318 Ga0307408_1000023189 598
288 3300031548 Ga0307408_100008370 Ga0307408_1000083702 598
289 3300031731 Ga0307405_10000001 Ga0307405_100000011131 598
290 3300031731 Ga0307405_10000085 Ga0307405_1000008518 598
291 3300031731 Ga0307405_10024765 Ga0307405_100247653 598
292 3300031852 Ga0307410_10000149 Ga0307410_1000014915 598
293 3300031901 Ga0307406_10000372 Ga0307406_1000037215 598
294 3300031903 Ga0307407_10000001 Ga0307407_10000001164 598
295 3300031903 Ga0307407_10000369 Ga0307407_100003697 598
296 3300031911 Ga0307412_10088265 Ga0307412_100882653 598
297 3300031995 Ga0307409_100019157 Ga0307409_1000191571 598
298 3300032002 Ga0307416_100000008 Ga0307416_100000008225 598
299 3300032004 Ga0307414_10000012 Ga0307414_10000012134 598
300 3300032004 Ga0307414_10000499 Ga0307414_100004997 598
301 3300032004 Ga0307414_10000575 Ga0307414_100005756 598
302 3300032004 Ga0307414_10001307 Ga0307414_100013078 598
303 3300032004 Ga0307414_10015111 Ga0307414_100151112 598
304 3300032004 Ga0307414_10058595 Ga0307414_100585951 598
305 3300032005 Ga0307411_10000008 Ga0307411_1000000828 598
306 3300032005 Ga0307411_10049872 Ga0307411_100498724 598
307 3300033180 Ga0307510_10000417 Ga0307510_1000041726 598
308 3300033180 Ga0307510_10040486 Ga0307510_100404861 598
309 3300037312 Ga0395899_0000027 Ga0395899_0000027_148255_150069 598
310 3300037312 Ga0395899_0002947 Ga0395899_0002947_7018_8829 598
311 3300037418 Ga0395900_0000195 Ga0395900_0000195_18959_20770 598
312 3300037418 Ga0395900_0000275 Ga0395900_0000275_63049_64860 598
313 3300037466 Ga0395898_0039235 Ga0395898_0039235_347_2158 598
314 3300037471 Ga0395905_0000001 Ga0395905_0000001_1156295_1158106 598
315 3300037471 Ga0395905_0005229 Ga0395905_0005229_9571_11382 598
316 3300038443 Ga0395901_0000644 Ga0395901_0000644_37945_39756 598
317 3300039447 Ga0436361_0179845 Ga0436361_0179845_4174_5985 598
318 3300042876 Ga0451577_0000010 Ga0451577_0000010_182564_184366 598
319 3300042876 Ga0451577_0000159 Ga0451577_0000159_74744_76555 598
320 3300042876 Ga0451577_0001728 Ga0451577_0001728_17239_19044 598
321 3300042876 Ga0451577_0030865 Ga0451577_0030865_695_2497 598
322 3300042876 Ga0451577_0074632 Ga0451577_0074632_1095_2897 598
323 3300042876 Ga0451577_0131831 Ga0451577_0131831_165_1967 598
324 3300044673 Ga0453683_0000111 Ga0453683_0000111_109708_111510 598
325 3300044673 Ga0453683_0000594 Ga0453683_0000594_13357_15162 598
326 3300044673 Ga0453683_0001699 Ga0453683_0001699_13478_15322 598
327 3300044673 Ga0453683_0014464 Ga0453683_0014464_2679_4481 598
328 3300044673 Ga0453683_0020808 Ga0453683_0020808_1103_2905 598
329 3300044673 Ga0453683_0053969 Ga0453683_0053969_690_2489 598
330 3300044712 Ga0453684_0000130 Ga0453684_0000130_164654_166456 598
331 3300044712 Ga0453684_0000432 Ga0453684_0000432_141098_142900 598
332 3300044712 Ga0453684_0001437 Ga0453684_0001437_18973_20778 598
333 3300044712 Ga0453684_0002066 Ga0453684_0002066_8485_10287 598
334 3300044712 Ga0453684_0002932 Ga0453684_0002932_24841_26646 598
335 3300044712 Ga0453684_0006119 Ga0453684_0006119_14180_15979 598
336 3300044712 Ga0453684_0009030 Ga0453684_0009030_2174_4003 598
337 3300044712 Ga0453684_0010520 Ga0453684_0010520_12233_14044 598
338 3300044712 Ga0453684_0013384 Ga0453684_0013384_11191_13002 598
339 3300044712 Ga0453684_0014992 Ga0453684_0014992_3303_5105 598
340 3300044712 Ga0453684_0017032 Ga0453684_0017032_1112_2917 598
341 3300044712 Ga0453684_0039346 Ga0453684_0039346_4386_6188 598
342 3300044712 Ga0453684_0078711 Ga0453684_0078711_1261_3219 598
343 3300044712 Ga0453684_0093438 Ga0453684_0093438_552_2354 598
344 3300044712 Ga0453684_0224013 Ga0453684_0224013_219_2021 598
345 3300045051 Ga0451576_0000113 Ga0451576_0000113_141344_143146 598
346 3300045051 Ga0451576_0000353 Ga0451576_0000353_86263_88065 598
347 3300045051 Ga0451576_0001464 Ga0451576_0001464_13357_15162 598
348 3300045051 Ga0451576_0001636 Ga0451576_0001636_18456_20258 598
349 3300045051 Ga0451576_0002696 Ga0451576_0002696_5029_6828 598
350 3300045051 Ga0451576_0011135 Ga0451576_0011135_7362_9164 598
351 3300045051 Ga0451576_0011211 Ga0451576_0011211_4785_6587 598
352 3300045051 Ga0451576_0012426 Ga0451576_0012426_7496_9310 598
353 3300045051 Ga0451576_0017354 Ga0451576_0017354_2482_4284 598
354 3300045051 Ga0451576_0048973 Ga0451576_0048973_2619_4421 598
355 3300046492 Ga0495585_0000037 Ga0495585_0000037_7586_9397 598
356 3300046492 Ga0495585_0000241 Ga0495585_0000241_44458_46269 598
357 3300046506 Ga0495583_0024641 Ga0495583_0024641_326_2137 598
358 3300046507 Ga0495606_0000060 Ga0495606_0000060_19224_21035 598
359 3300046507 Ga0495606_0037365 Ga0495606_0037365_1313_3112 598
360 3300046512 Ga0495610_0000108 Ga0495610_0000108_23875_25680 598
361 3300046512 Ga0495610_0000129 Ga0495610_0000129_37198_39003 598
362 3300046513 Ga0495616_0001861 Ga0495616_0001861_10233_12044 598
363 3300046522 Ga0495643_0003233 Ga0495643_0003233_2271_4067 598
364 3300046524 Ga0495648_0002824 Ga0495648_0002824_13308_15119 598
365 3300046538 Ga0495609_0006732 Ga0495609_0006732_3376_5187 598
366 3300046558 Ga0495633_0000006 Ga0495633_0000006_31699_33510 598
367 3300046558 Ga0495633_0011790 Ga0495633_0011790_992_2803 598
368 3300046558 Ga0495633_0035996 Ga0495633_0035996_155_1960 598
369 3300046616 Ga0495668_0000054 Ga0495668_0000054_191706_193517 598
370 3300046660 Ga0495625_0000191 Ga0495625_0000191_93301_95112 598
371 3300046660 Ga0495625_0000355 Ga0495625_0000355_10459_12270 598
372 3300046660 Ga0495625_0000548 Ga0495625_0000548_47922_49733 598
373 3300046660 Ga0495625_0017365 Ga0495625_0017365_862_2658 598
374 3300046660 Ga0495625_0080863 Ga0495625_0080863_274_2085 598
375 3300046665 Ga0495661_0000946 Ga0495661_0000946_3323_5134 598
376 3300046665 Ga0495661_0003229 Ga0495661_0003229_3128_4939 598
377 3300046694 Ga0495649_0000061 Ga0495649_0000061_2252_4063 598
378 3300047443 Ga0495687_003171 Ga0495687_003171_710_2521 598
379 3300047443 Ga0495687_005916 Ga0495687_005916_977_2788 598
380 3300047469 Ga0495673_0041603 Ga0495673_0041603_101_1912 598
381 3300047472 Ga0495686_0007995 Ga0495686_0007995_85_1896 598
382 3300047472 Ga0495686_0049795 Ga0495686_0049795_386_2194 598
383 3300048919 Ga0496116_0000004 Ga0496116_0000004_157556_159352 598
384 3300048920 Ga0496117_0066083 Ga0496117_0066083_455_2251 598
385 3300048921 Ga0496118_0012233 Ga0496118_0012233_5570_7366 598
386 3300048924 Ga0496121_0076335 Ga0496121_0076335_708_2504 598
387 3300048925 Ga0496122_0000876 Ga0496122_0000876_24241_26049 598
388 3300048926 Ga0496123_0000777 Ga0496123_0000777_33777_35585 598
389 3300048928 Ga0496125_0000012 Ga0496125_0000012_159790_161586 598
390 3300048928 Ga0496125_0011657 Ga0496125_0011657_4252_6048 598
391 3300048929 Ga0496126_0008593 Ga0496126_0008593_4748_6544 598
392 3300049459 Ga0495678_009399 Ga0495678_009399_2495_4306 598
393 3300049541 Ga0501325_000478 Ga0501325_000478_24_1820 598
394 3300049572 Ga0501036_0076003 Ga0501036_0076003_968_2767 598
395 3300049581 Ga0501047_0009897 Ga0501047_0009897_19_1818 598
396 3300049663 Ga0501223_000286 Ga0501223_000286_5621_7426 598
397 3300049671 Ga0501238_000095 Ga0501238_000095_12143_13939 598
398 3300049763 Ga0501266_000004 Ga0501266_000004_72457_74253 598
399 3300049776 Ga0501280_000126 Ga0501280_000126_2369_4165 598
400 3300049822 Ga0501035_0104850 Ga0501035_0104850_381_2180 598
401 3300050493 nmdc:mga0k408_245_c1 nmdc:mga0k408_245_c1_17778_19589 598
402 3300050511 nmdc:mga08y16_46593_c1 nmdc:mga08y16_46593_c1_980_2782 598
403 3300053090 Ga0500646_0003752 Ga0500646_0003752_827_2623 598
404 3300053090 Ga0500646_0004436 Ga0500646_0004436_158_1954 598
405 3300053096 Ga0500641_0000025 Ga0500641_0000025_40559_42355 598
406 3300053122 Ga0500608_007731 Ga0500608_007731_2020_3831 598
407 3300053125 Ga0500618_000018 Ga0500618_000018_69244_71055 598
408 3300053134 Ga0500658_0000010 Ga0500658_0000010_170646_172442 598
409 3300053153 Ga0500616_0013063 Ga0500616_0013063_2660_4468 598
410 3300053156 Ga0500622_0005326 Ga0500622_0005326_5199_7010 598
411 3300053156 Ga0500622_0005648 Ga0500622_0005648_5433_7238 598
412 3300053157 Ga0500624_001390 Ga0500624_001390_643_2454 598

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21018

BipA_C

TypA/BipA C-terminal domain

470

579

0.98

PF00679

EFG_C

Elongation factor G C-terminus

382

469

0.96

PF00009

GTP_EFTU

Elongation factor Tu GTP binding domain

2

195

0.95

PF01926

MMR_HSR1

50S ribosome-binding GTPase

6

128

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e3x-assembly1.cif.gz_A-2 the c-terminal part of bipa protein from vibrio parahaemolyticus rimd 2210633 0.9747 300 595
3e3x-assembly1.cif.gz_A-2 the c-terminal part of bipa protein from vibrio parahaemolyticus rimd 2210633 0.9647 300 595
4zck-assembly1.cif.gz_A crystal structure of c-terminal fragment of escherichia coli bipa/typa 0.9142 303 595
4zck-assembly1.cif.gz_A crystal structure of c-terminal fragment of escherichia coli bipa/typa 0.8938 303 595
7oya-assembly1.cif.gz_v2 cryo-em structure of the 1 hpf zebrafish embryo 80s ribosome 0.8907 400 463
ID Description Score Start End Superfamily
af_G3K3T1_274_374_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9843 201 297 2.40.30.10
af_P0DTT0_303_388_3.30.70.870 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Elongation Factor G (Translational Gtpase), domain 3 0.9832 301 386 3.30.70.870
3e3xA03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);bipa protein 0.9757 479 535 2.40.50.250
af_Q2G1Y6_202_302_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9753 201 297 2.40.30.10
af_P0DTT0_303_388_3.30.70.870 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Elongation Factor G (Translational Gtpase), domain 3 0.9721 301 386 3.30.70.870
ID Description Score Start End GO Terms
AF-A0A812IU49-F1-model_v4 BipA protein 0.9923 91 165 GO:0003924
GO:0005525
GO:0005829
GO:1990904
AF-A0A0B4EE04-F1-model_v4 GTP-binding protein TypA 0.9866 58 199 GO:0003924
GO:0005525
GO:0005829
GO:1990904
AF-A0A6P6GEK2-F1-model_v4 Elongation factor G-1, mitochondrial-like 0.9849 393 472 GO:0003746
GO:0003924
GO:0005525
GO:0005739
GO:0070125
AF-A0A257C2Z4-F1-model_v4 Translational GTPase TypA 0.9807 344 595 GO:0017111
AF-A0A7V0XX28-F1-model_v4 Elongation factor EFG domain-containing protein 0.9807 393 472 GO:0005525
GO:0032790

Feature Viewer

pLDDT pTM Quality
83.08 0.73 High
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Predicted Structure (AlphaFold2)

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