F436472

General Info

Members Datasets Scaffolds Average Seq Length
407 230 348 306

Family's Representative Sequence

Representative Sequence 3300015689|Ga0183360_10003|Ga0183360_10003411
Length 344
Sequence VYCAQRAGYGGVRPRSPRPRAGPGPARAATLAGMTQFAARLLYLFASLIGRLPWSWQQRLGDAVASVWQRRDAREARVARVNLGLAYPELLPAQREQWQQAIVRTTARQAVETLRLWTRPHAENLGLLRERHGTELFDAALAAGKGLIVAAPHYGNWELLNQWLAQRTPLAILYKPPESAVGEAFLNLVRADTDADRVTQVRAEGSAVRQLWKRLSAGGVVGILPDQQPKAGDGEFAPFFGVQALTMTLLGRLAERTGAAVLFCYCERIDQHPDGPGFALRIEAAPEGIADPDPRRACAALNQAMERIARRDPAQYQWTYKRYTLRPSGDGRDNPYRSIETDRR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
3 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
4 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
5 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
6 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
7 2643221559 Lysobacter sp. Root559 Isolate Unclassified
8 2643221573 Lysobacter sp. Root604 Isolate Unclassified
9 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
10 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
11 2643221586 Lysobacter sp. Root667 Isolate Unclassified
12 2643221593 Lysobacter sp. Root690 Isolate Unclassified
13 2643221612 Lysobacter sp. Root76 Isolate Unclassified
14 2643221695 Lysobacter sp. Root494 Isolate Unclassified
15 2643221720 Lysobacter sp. Root916 Isolate Unclassified
16 2643221727 Lysobacter sp. Root96 Isolate Unclassified
17 2643221728 Lysobacter sp. Root983 Isolate Unclassified
18 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
19 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
20 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
21 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
22 2818991457 Xanthomonas translucens 569 Isolate Unclassified
23 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
24 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
25 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
26 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
27 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
28 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
29 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
30 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
31 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
32 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
33 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
34 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
35 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
36 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
37 2919513703 Luteimonas sp. 3794 Isolate Unclassified
38 2919675420 Luteimonas terrae 4099 Isolate Unclassified
39 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
40 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
41 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
42 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
43 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
44 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
45 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
46 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
47 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
48 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
49 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
50 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
51 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
52 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
53 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
54 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
55 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
56 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
57 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
58 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
59 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
60 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
61 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
62 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
63 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
64 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
65 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
66 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
67 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
68 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
69 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
70 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
71 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
72 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
73 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
74 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
75 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
76 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
77 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
78 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
79 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
80 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
81 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
82 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
83 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
84 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
85 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
86 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
87 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
88 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
89 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
90 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
91 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
92 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
93 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
94 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
95 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
96 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
97 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
98 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
99 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
100 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
101 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
102 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
103 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
104 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
107 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
110 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
111 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
112 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
133 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
135 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
137 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
138 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
139 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
140 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
141 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
142 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
143 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
144 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
145 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
146 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
147 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
148 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
149 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
150 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
151 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
152 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
153 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
154 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
155 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
156 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
157 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
158 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
159 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
160 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
161 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
162 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
163 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
164 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
165 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
166 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
167 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
168 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
169 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
170 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
171 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
172 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
173 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
174 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
175 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
176 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
177 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
178 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
179 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
180 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
181 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
182 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
183 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
184 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
185 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
186 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
187 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
188 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
189 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
190 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
191 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
192 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
193 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
194 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
195 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
196 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
197 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
198 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
199 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
200 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
201 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
202 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
203 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
204 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
205 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
206 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
207 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
208 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
209 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
210 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
211 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
212 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
213 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
214 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
215 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
216 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
217 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
218 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
219 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
220 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
221 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
222 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
223 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
224 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
225 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
226 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
227 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
228 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
229 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
230 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.5
Metatranscriptomes 0
Isolates 14.5

Biome Distribution

Category Percentage (%)
Aerial Root 0.25
Bulb 0
Endosphere 24.08
Nodule 0.25
Rhizoplane 2.46
Rhizosphere 48.89
Stem 0
Stem Tuber 0
Unclassified 24.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2252835 2162886007 Bacteria 3670
2 JGI25152J39213_1004043 3300002773 Bacteria 4774
3 JGI25150J39212_1000347 3300002774 Bacteria 22719
4 JGI25151J46595_10008956 3300003187 Bacteria 4774
5 JGI25151J46595_10015980 3300003187 Bacteria 3293
6 JGI25153J46596_10008814 3300003215 Bacteria 4774
7 rootH2_10087598 3300003320 Bacteria 1555
8 rootL2_10176085 3300003322 Bacteria 3480
9 rootH1_10018072 3300003323 Bacteria 3352
10 Ga0055526_1000003 3300003771 Bacteria 413092
11 Ga0055526_1000247 3300003771 Bacteria 45809
12 Ga0055526_1009034 3300003771 Bacteria 4865
13 Ga0055537_1000055 3300003773 Bacteria 81951
14 Ga0055537_1001998 3300003773 Bacteria 7252
15 Ga0055524_1000002 3300003775 Bacteria 459550
16 Ga0055524_1005200 3300003775 Bacteria 5855
17 Ga0055524_1018532 3300003775 Bacteria 2413
18 Ga0055536_1002218 3300003781 Bacteria 11056
19 Ga0055536_1002224 3300003781 Bacteria 11045
20 Ga0055536_1002379 3300003781 Bacteria 10611
21 Ga0055536_1003078 3300003781 Bacteria 9094
22 Ga0055536_1013519 3300003781 Bacteria 2935
23 Ga0055536_1041569 3300003781 Bacteria 1084
24 Ga0055534_1000062 3300003784 Bacteria 81951
25 Ga0055534_1000599 3300003784 Bacteria 18695
26 Ga0055528_1000001 3300003790 Bacteria 402384
27 Ga0055528_1000407 3300003790 Bacteria 34812
28 Ga0055530_10001944 3300003791 Bacteria 14108
29 Ga0055530_10001946 3300003791 Bacteria 14103
30 Ga0055530_10004848 3300003791 Bacteria 6723
31 Ga0055531_10005005 3300003794 Bacteria 7859
32 Ga0055531_10005432 3300003794 Bacteria 7461
33 Ga0055531_10007553 3300003794 Bacteria 5904
34 Ga0055531_10016059 3300003794 Bacteria 3256
35 Ga0055531_10018593 3300003794 Bacteria 2861
36 Ga0055531_10019980 3300003794 Bacteria 2675
37 Ga0055531_10023046 3300003794 Bacteria 2350
38 Ga0055531_10023979 3300003794 Bacteria 2267
39 Ga0055531_10030643 3300003794 Bacteria 1800
40 Ga0055531_10031230 3300003794 Bacteria 1768
41 Ga0058692_1000004 3300003856 Bacteria 431119
42 Ga0058692_1000078 3300003856 Bacteria 70873
43 Ga0065704_10000512 3300005289 Bacteria 18867
44 Ga0065704_10081143 3300005289 Bacteria 3812
45 Ga0070670_100026101 3300005331 Bacteria 5028
46 Ga0070670_100026652 3300005331 Bacteria 4972
47 Ga0070668_100016074 3300005347 Bacteria 5600
48 Ga0070669_100056306 3300005353 Bacteria 2883
49 Ga0070671_100080303 3300005355 Bacteria 2727
50 Ga0070674_100082809 3300005356 Bacteria 2296
51 Ga0070673_100037538 3300005364 Bacteria 3692
52 Ga0070667_100241187 3300005367 Bacteria 1614
53 Ga0070678_100015476 3300005456 Bacteria 4852
54 Ga0070679_100164646 3300005530 Bacteria 2191
55 Ga0070672_100029711 3300005543 Bacteria 4101
56 Ga0070665_100120715 3300005548 Bacteria 2623
57 Ga0081539_10028703 3300005985 Bacteria 3494
58 Ga0075365_10069826 3300006038 Bacteria 2362
59 Ga0075364_10022340 3300006051 Bacteria 3994
60 Ga0075364_10061412 3300006051 Bacteria 2465
61 Ga0075364_10072318 3300006051 Bacteria 2272
62 Ga0075369_10066888 3300006186 Bacteria 1577
63 Ga0105251_10002153 3300009011 Bacteria 15809
64 Ga0105244_10018457 3300009036 Bacteria 3914
65 Ga0105243_10011087 3300009148 Bacteria 6818
66 Ga0105243_10017759 3300009148 Bacteria 5382
67 Ga0105032_100895 3300009979 Bacteria 2801
68 Ga0157373_10198240 3300013100 Bacteria 1415
69 Ga0157373_10402092 3300013100 Bacteria 982
70 Ga0157371_10000509 3300013102 Bacteria 46826
71 Ga0157370_10026214 3300013104 Bacteria 5759
72 Ga0157370_10108214 3300013104 Bacteria 2599
73 Ga0157370_10161938 3300013104 Bacteria 2081
74 Ga0157370_10259251 3300013104 Bacteria 1607
75 Ga0157369_10040515 3300013105 Bacteria 5084
76 Ga0157369_10108607 3300013105 Bacteria 2951
77 Ga0182008_10001256 3300014497 Bacteria 17405
78 Ga0182008_10012626 3300014497 Bacteria 4455
79 Ga0182006_1007230 3300015261 Bacteria 5099
80 Ga0182006_1013978 3300015261 Bacteria 3467
81 Ga0182006_1030700 3300015261 Bacteria 2170
82 Ga0182007_10000142 3300015262 Bacteria 47856
83 Ga0182005_1000456 3300015265 Bacteria 21433
84 Ga0182005_1011989 3300015265 Bacteria 2458
85 Ga0183360_10003 3300015689 Bacteria 713221
86 Ga0163161_10011448 3300017792 Bacteria 6154
87 Ga0163161_10097576 3300017792 Bacteria 2183
88 Ga0207425_1003291 3300025245 Bacteria 5245
89 Ga0209129_1000150 3300025258 Bacteria 113886
90 Ga0209565_1000002 3300025263 Bacteria 1423083
91 Ga0209565_1000050 3300025263 Bacteria 213856
92 Ga0209565_1006988 3300025263 Bacteria 3095
93 Ga0209673_1000002 3300025273 Bacteria 1423083
94 Ga0209673_1000199 3300025273 Bacteria 120904
95 Ga0209673_1010180 3300025273 Bacteria 3989
96 Ga0209130_1003132 3300025284 Bacteria 7347
97 Ga0209130_1007826 3300025284 Bacteria 3241
98 Ga0209675_1000002 3300025291 Bacteria 1423083
99 Ga0209675_1000007 3300025291 Bacteria 683430
100 Ga0209675_1024873 3300025291 Bacteria 1521
101 Ga0209676_1000018 3300025292 Bacteria 631385
102 Ga0209676_1000052 3300025292 Bacteria 371539
103 Ga0209676_1000168 3300025292 Bacteria 156042
104 Ga0209676_1000612 3300025292 Bacteria 52191
105 Ga0209676_1002246 3300025292 Bacteria 14279
106 Ga0209676_1002770 3300025292 Bacteria 11705
107 Ga0209676_1003607 3300025292 Bacteria 9320
108 Ga0209676_1006509 3300025292 Bacteria 5744
109 Ga0209676_1015834 3300025292 Bacteria 2754
110 Ga0209676_1016198 3300025292 Bacteria 2704
111 Ga0209676_1041356 3300025292 Bacteria 1289
112 Ga0209025_1000048 3300025294 Bacteria 335574
113 Ga0209025_1011950 3300025294 Bacteria 5641
114 Ga0209025_1062525 3300025294 Bacteria 1380
115 Ga0209564_1000004 3300025295 Bacteria 1424639
116 Ga0209564_1000061 3300025295 Bacteria 322795
117 Ga0209564_1005388 3300025295 Bacteria 7330
118 Ga0209758_1000056 3300025297 Bacteria 335574
119 Ga0209050_1000382 3300025298 Bacteria 83595
120 Ga0209050_1000424 3300025298 Bacteria 77803
121 Ga0209050_1004964 3300025298 Bacteria 8665
122 Ga0209050_1009784 3300025298 Bacteria 4838
123 Ga0209050_1025414 3300025298 Bacteria 2014
124 Ga0209256_1000004 3300025299 Bacteria 1424643
125 Ga0209256_1003876 3300025299 Bacteria 9931
126 Ga0209256_1006477 3300025299 Bacteria 6166
127 Ga0209256_1009603 3300025299 Bacteria 4208
128 Ga0209256_1011769 3300025299 Bacteria 3448
129 Ga0209256_1022557 3300025299 Bacteria 1903
130 Ga0209051_1001153 3300025303 Bacteria 24028
131 Ga0209257_1000035 3300025304 Bacteria 631463
132 Ga0209257_1000046 3300025304 Bacteria 477765
133 Ga0209257_1000147 3300025304 Bacteria 194105
134 Ga0209257_1000261 3300025304 Bacteria 121357
135 Ga0209257_1002362 3300025304 Bacteria 18933
136 Ga0209257_1008033 3300025304 Bacteria 6147
137 Ga0209257_1008123 3300025304 Bacteria 6093
138 Ga0209257_1008529 3300025304 Bacteria 5792
139 Ga0209257_1017601 3300025304 Bacteria 2804
140 Ga0209257_1020906 3300025304 Bacteria 2398
141 Ga0207655_1022900 3300025728 Bacteria 3113
142 Ga0207655_1094326 3300025728 Bacteria 1046
143 Ga0207713_1000585 3300025735 Bacteria 36150
144 Ga0207705_10114121 3300025909 Bacteria 1998
145 Ga0207660_10157489 3300025917 Bacteria 1749
146 Ga0207657_10015053 3300025919 Bacteria 7512
147 Ga0207681_10046497 3300025923 Bacteria 2919
148 Ga0207650_10030664 3300025925 Bacteria 3875
149 Ga0207650_10206829 3300025925 Bacteria 1575
150 Ga0207644_10005261 3300025931 Bacteria 8447
151 Ga0207644_10142278 3300025931 Bacteria 1848
152 Ga0207709_10000528 3300025935 Bacteria 33221
153 Ga0207709_10019616 3300025935 Bacteria 3805
154 Ga0207669_10139142 3300025937 Bacteria 1682
155 Ga0207691_10002013 3300025940 Bacteria 19906
156 Ga0207679_10566727 3300025945 Bacteria 1020
157 Ga0207668_10008323 3300025972 Bacteria 6176
158 Ga0207668_10025053 3300025972 Bacteria 3856
159 Ga0207658_10173526 3300025986 Bacteria 1779
160 Ga0207683_10024728 3300026121 Bacteria 5175
161 Ga0209371_1000018 3300027312 Bacteria 614700
162 Ga0209371_1000025 3300027312 Bacteria 450640
163 Ga0209983_1011402 3300027665 Bacteria 1819
164 Ga0209971_1002018 3300027682 Bacteria 4935
165 Ga0209974_10016938 3300027876 Bacteria 2419
166 Ga0268266_10336320 3300028379 Bacteria 1416
167 Ga0307515_10244418 3300028794 Bacteria 1559
168 Ga0268256_1000016 3300030500 Bacteria 614700
169 Ga0268256_1000027 3300030500 Bacteria 450640
170 Ga0314311_1198479 3300030733 Bacteria 1949
171 Ga0316183_1093021 3300030742 Bacteria 3630
172 Ga0307513_10000429 3300031456 Bacteria 60815
173 Ga0307513_10138653 3300031456 Bacteria 2362
174 Ga0307408_100062903 3300031548 Bacteria 2713
175 Ga0307408_100173136 3300031548 Bacteria 1725
176 Ga0307516_10004710 3300031730 Bacteria 16677
177 Ga0307405_10062481 3300031731 Bacteria 2359
178 Ga0307405_10070368 3300031731 Bacteria 2247
179 Ga0307405_10124610 3300031731 Bacteria 1769
180 Ga0307413_10035842 3300031824 Bacteria 2850
181 Ga0307413_10128061 3300031824 Bacteria 1732
182 Ga0307410_10027097 3300031852 Bacteria 3618
183 Ga0307406_10001776 3300031901 Bacteria 11789
184 Ga0307406_10453367 3300031901 Bacteria 1029
185 Ga0307412_10271096 3300031911 Bacteria 1328
186 Ga0307416_100248076 3300032002 Bacteria 1731
187 Ga0307416_100279249 3300032002 Bacteria 1646
188 Ga0307414_10002016 3300032004 Bacteria 10551
189 Ga0307414_10012797 3300032004 Bacteria 4978
190 Ga0307414_10017783 3300032004 Bacteria 4358
191 Ga0395899_0094875 3300037312 Bacteria 2158
192 Ga0395900_0106219 3300037418 Bacteria 2884
193 Ga0395900_0165850 3300037418 Bacteria 2251
194 Ga0395905_0009637 3300037471 Bacteria 9425
195 Ga0395905_0574094 3300037471 Bacteria 1029
196 Ga0395905_0627858 3300037471 Bacteria 976
197 Ga0395901_0057155 3300038443 Bacteria 4058
198 Ga0237819_00014 3300038705 Bacteria 59581
199 Ga0237816_00033 3300039145 Bacteria 8463
200 Ga0439436_0006772 3300041404 Bacteria 3522
201 Ga0439436_0007212 3300041404 Bacteria 3420
202 Ga0439436_0007938 3300041404 Bacteria 3260
203 Ga0439436_0009088 3300041404 Bacteria 3048
204 Ga0439439_0000263 3300041406 Bacteria 8243
205 Ga0439447_001901 3300041407 Bacteria 7646
206 Ga0439465_0000166 3300041413 Bacteria 16776
207 Ga0439465_0000375 3300041413 Bacteria 12836
208 Ga0439465_0035034 3300041413 Bacteria 1608
209 Ga0451807_1403101 3300041486 Bacteria 2070
210 Ga0451841_0077621 3300041498 Bacteria 2974
211 Ga0451843_0091747 3300041509 Bacteria 1671
212 Ga0451853_1027231 3300041512 Bacteria 1701
213 Ga0439433_0029675 3300041999 Bacteria 1249
214 Ga0439445_0007005 3300042004 Bacteria 2605
215 Ga0439432_003849 3300042006 Bacteria 5533
216 Ga0439432_021373 3300042006 Bacteria 2146
217 Ga0439432_047935 3300042006 Bacteria 1339
218 Ga0439449_0000016 3300042007 Bacteria 49059
219 Ga0439449_0010232 3300042007 Bacteria 3543
220 Ga0439449_0010282 3300042007 Bacteria 3533
221 Ga0439449_0016567 3300042007 Bacteria 2769
222 Ga0439449_0060844 3300042007 Bacteria 1393
223 Ga0439452_013662 3300042010 Bacteria 2274
224 Ga0439462_0010531 3300042015 Bacteria 2343
225 Ga0439462_0014871 3300042015 Bacteria 2003
226 Ga0450901_002318 3300042533 Bacteria 2067
227 Ga0451577_0009269 3300042876 Bacteria 9486
228 Ga0451577_0017404 3300042876 Bacteria 6641
229 Ga0495627_016611 3300046453 Bacteria 2516
230 Ga0495627_039079 3300046453 Bacteria 1465
231 Ga0495591_028917 3300046458 Bacteria 1690
232 Ga0495638_0022184 3300046460 Bacteria 4170
233 Ga0495638_0026526 3300046460 Bacteria 3754
234 Ga0495638_0041497 3300046460 Bacteria 2911
235 Ga0495607_0044611 3300046501 Bacteria 2613
236 Ga0495610_0007929 3300046512 Bacteria 6970
237 Ga0495610_0036346 3300046512 Bacteria 2518
238 Ga0495631_0001419 3300046518 Bacteria 14555
239 Ga0495643_0001536 3300046522 Bacteria 20716
240 Ga0495663_0005530 3300046525 Bacteria 3507
241 Ga0495663_0018273 3300046525 Bacteria 1996
242 Ga0495598_0005629 3300046537 Bacteria 2789
243 Ga0495621_0009089 3300046539 Bacteria 3005
244 Ga0495621_0065673 3300046539 Bacteria 1326
245 Ga0495633_0019106 3300046558 Bacteria 3468
246 Ga0495633_0045060 3300046558 Bacteria 2089
247 Ga0495633_0066021 3300046558 Bacteria 1690
248 Ga0495656_0014777 3300046615 Bacteria 2934
249 Ga0495656_0019600 3300046615 Bacteria 2613
250 Ga0495668_0000951 3300046616 Bacteria 32160
251 Ga0495668_0047004 3300046616 Bacteria 2396
252 Ga0495625_0101188 3300046660 Bacteria 1979
253 Ga0495625_0203136 3300046660 Bacteria 1306
254 Ga0495671_0005638 3300046692 Bacteria 7304
255 Ga0495660_0019847 3300046810 Bacteria 3857
256 Ga0495636_0003752 3300047318 Bacteria 5911
257 Ga0495636_0004360 3300047318 Bacteria 5552
258 Ga0495636_0024555 3300047318 Bacteria 2445
259 Ga0495636_0056334 3300047318 Bacteria 1655
260 Ga0495636_0078109 3300047318 Bacteria 1421
261 Ga0495672_0001653 3300047320 Bacteria 21663
262 Ga0495672_0056764 3300047320 Bacteria 2276
263 Ga0495677_0010484 3300047445 Bacteria 3402
264 Ga0495686_0002109 3300047472 Bacteria 19488
265 Ga0495686_0013977 3300047472 Bacteria 5550
266 Ga0496100_0151593 3300048903 Bacteria 1654
267 Ga0496102_0537686 3300048905 Bacteria 1091
268 Ga0496104_0073615 3300048907 Bacteria 3250
269 Ga0496108_0015258 3300048911 Bacteria 6270
270 Ga0496111_0016689 3300048914 Bacteria 5064
271 Ga0496111_0213418 3300048914 Bacteria 1434
272 Ga0496112_0368730 3300048915 Bacteria 1377
273 Ga0496113_0027949 3300048916 Bacteria 4050
274 Ga0496114_0004683 3300048917 Bacteria 10639
275 Ga0496116_0023331 3300048919 Bacteria 4609
276 Ga0496116_0061514 3300048919 Bacteria 2430
277 Ga0496116_0147269 3300048919 Bacteria 1314
278 Ga0496117_0003169 3300048920 Bacteria 19552
279 Ga0496117_0027710 3300048920 Bacteria 4405
280 Ga0496117_0059269 3300048920 Bacteria 2645
281 Ga0496117_0065133 3300048920 Bacteria 2479
282 Ga0496118_0000661 3300048921 Bacteria 56425
283 Ga0496118_0003383 3300048921 Bacteria 20155
284 Ga0496118_0005830 3300048921 Bacteria 13808
285 Ga0496118_0019390 3300048921 Bacteria 6080
286 Ga0496118_0050665 3300048921 Bacteria 3184
287 Ga0496118_0066382 3300048921 Bacteria 2634
288 Ga0496118_0071711 3300048921 Bacteria 2492
289 Ga0496118_0115326 3300048921 Bacteria 1768
290 Ga0496119_0000192 3300048922 Bacteria 85787
291 Ga0496119_0002158 3300048922 Bacteria 22096
292 Ga0496120_0001184 3300048923 Bacteria 33176
293 Ga0496120_0002178 3300048923 Bacteria 20782
294 Ga0496121_0002087 3300048924 Bacteria 31540
295 Ga0496121_0037197 3300048924 Bacteria 4326
296 Ga0496122_0001623 3300048925 Bacteria 35103
297 Ga0496122_0002776 3300048925 Bacteria 24122
298 Ga0496122_0004567 3300048925 Bacteria 17062
299 Ga0496122_0021677 3300048925 Bacteria 5742
300 Ga0496122_0024738 3300048925 Bacteria 5244
301 Ga0496122_0128713 3300048925 Bacteria 1614
302 Ga0496123_0001282 3300048926 Bacteria 35895
303 Ga0496123_0002342 3300048926 Bacteria 23773
304 Ga0496123_0017921 3300048926 Bacteria 5669
305 Ga0496123_0029171 3300048926 Bacteria 4070
306 Ga0496123_0106558 3300048926 Bacteria 1614
307 Ga0496123_0179066 3300048926 Bacteria 1109
308 Ga0496124_0000006 3300048927 Bacteria 904259
309 Ga0496124_0002117 3300048927 Bacteria 26727
310 Ga0496124_0002767 3300048927 Bacteria 22294
311 Ga0496124_0006154 3300048927 Bacteria 13165
312 Ga0496124_0021077 3300048927 Bacteria 6010
313 Ga0496124_0027891 3300048927 Bacteria 5057
314 Ga0496124_0057736 3300048927 Bacteria 3269
315 Ga0496124_0096569 3300048927 Bacteria 2400
316 Ga0496124_0152507 3300048927 Bacteria 1810
317 Ga0496124_0210518 3300048927 Bacteria 1471
318 Ga0496125_0005651 3300048928 Bacteria 13801
319 Ga0496125_0022705 3300048928 Bacteria 5817
320 Ga0496125_0023491 3300048928 Bacteria 5689
321 Ga0496125_0059969 3300048928 Bacteria 3062
322 Ga0496125_0210892 3300048928 Bacteria 1261
323 Ga0496126_0005622 3300048929 Bacteria 14253
324 Ga0496126_0082454 3300048929 Bacteria 2841
325 Ga0496126_0127037 3300048929 Bacteria 2206
326 Ga0496126_0127338 3300048929 Bacteria 2203
327 Ga0496126_0132167 3300048929 Bacteria 2156
328 Ga0501290_001177 3300049513 Bacteria 3664
329 Ga0501032_0028532 3300049569 Bacteria 3835
330 Ga0501033_0055701 3300049570 Bacteria 2923
331 Ga0501034_0000192 3300049571 Bacteria 115486
332 Ga0501034_0016434 3300049571 Bacteria 7595
333 Ga0501034_0035452 3300049571 Bacteria 5057
334 Ga0501037_0178395 3300049573 Bacteria 1508
335 Ga0501038_0013401 3300049574 Bacteria 7474
336 Ga0501043_0004402 3300049579 Bacteria 11442
337 Ga0501043_0151496 3300049579 Bacteria 1815
338 Ga0501209_047948 3300049656 Bacteria 1156
339 Ga0501245_009699 3300049708 Bacteria 1385
340 Ga0501265_000728 3300049762 Bacteria 3606
341 Ga0501275_000002 3300049772 Bacteria 42523
342 Ga0501035_0021562 3300049822 Bacteria 5923
343 Ga0501044_0012823 3300049823 Bacteria 9076
344 Ga0501044_0014548 3300049823 Bacteria 8489
345 nmdc:mga00v17_29051_c1 3300050491 Bacteria 3243
346 nmdc:mga00v17_62917_c1 3300050491 Bacteria 2284
347 nmdc:mga00v17_671_c1 3300050491 Bacteria 18843
348 Ga0500634_0000139 3300053161 Bacteria 26249

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006051 Ga0075364_10061412 Ga0075364_100614123 272
2 3300050491 nmdc:mga00v17_29051_c1 nmdc:mga00v17_29051_c1_1002_1922 272
3 3300031548 Ga0307408_100062903 Ga0307408_1000629032 273
4 3300006051 Ga0075364_10022340 Ga0075364_100223404 274
5 3300041407 Ga0439447_001901 Ga0439447_001901_4571_5491 274
6 3300050491 nmdc:mga00v17_671_c1 nmdc:mga00v17_671_c1_14156_15061 274
7 3300039145 Ga0237816_00033 Ga0237816_00033_3126_4022 275
8 3300046616 Ga0495668_0000951 Ga0495668_0000951_19216_20136 275
9 3300031456 Ga0307513_10000429 Ga0307513_1000042934 281
10 3300042876 Ga0451577_0009269 Ga0451577_0009269_1026_1943 284
11 3300031730 Ga0307516_10004710 Ga0307516_100047103 285
12 iso_pu_bacteria 2643221579 2643906583 286
13 iso_pu_bacteria 2643221581 2643913901 286
14 iso_pu_bacteria 2895522137 2895524525 286
15 iso_pu_bacteria 2923516293 2923516368 286
16 iso_pu_bacteria 8002869464 8002870355 286
17 iso_pu_bacteria 2643221559 2643818127 287
18 iso_pu_bacteria 2643221573 2643880294 287
19 iso_pu_bacteria 2643221586 2643937791 287
20 iso_pu_bacteria 2643221593 2643973632 287
21 iso_pu_bacteria 2643221612 2644078696 287
22 iso_pu_bacteria 2643221720 2644660871 287
23 iso_pu_bacteria 2643221727 2644693473 287
24 iso_pu_bacteria 2643221728 2644698950 287
25 iso_pu_bacteria 8003014200 8003017764 287
26 iso_pu_bacteria 2571042365 2572254238 288
27 iso_pu_bacteria 2643221695 2644528085 288
28 iso_pu_bacteria 2895498888 2895502056 288
29 iso_pu_bacteria 2895511927 2895518094 288
30 iso_pu_bacteria 2895525241 2895525917 288
31 3300005364 Ga0070673_100037538 Ga0070673_1000375382 289
32 3300025931 Ga0207644_10142278 Ga0207644_101422781 289
33 3300046525 Ga0495663_0018273 Ga0495663_0018273_679_1644 289
34 3300046615 Ga0495656_0014777 Ga0495656_0014777_1950_2906 289
35 3300046616 Ga0495668_0047004 Ga0495668_0047004_898_1863 289
36 3300047318 Ga0495636_0003752 Ga0495636_0003752_414_1370 289
37 3300047318 Ga0495636_0056334 Ga0495636_0056334_42_1007 289
38 3300047445 Ga0495677_0010484 Ga0495677_0010484_1486_2451 289
39 3300048914 Ga0496111_0016689 Ga0496111_0016689_158_1114 289
40 3300048916 Ga0496113_0027949 Ga0496113_0027949_2076_3032 289
41 iso_pu_bacteria 2524614729 2525557385 289
42 iso_pu_bacteria 2627854209 2630648976 289
43 3300003781 Ga0055536_1003078 Ga0055536_10030785 290
44 3300005289 Ga0065704_10000512 Ga0065704_100005123 290
45 3300025292 Ga0209676_1000052 Ga0209676_1000052310 290
46 3300028794 Ga0307515_10244418 Ga0307515_102444182 290
47 3300030733 Ga0314311_1198479 Ga0314311_11984794 290
48 3300031456 Ga0307513_10138653 Ga0307513_101386532 290
49 3300032004 Ga0307414_10012797 Ga0307414_100127972 290
50 3300041404 Ga0439436_0009088 Ga0439436_0009088_1483_2382 290
51 3300041413 Ga0439465_0000166 Ga0439465_0000166_1954_2853 290
52 3300042004 Ga0439445_0007005 Ga0439445_0007005_759_1658 290
53 3300042007 Ga0439449_0000016 Ga0439449_0000016_46731_47630 290
54 3300042015 Ga0439462_0014871 Ga0439462_0014871_355_1254 290
55 3300048917 Ga0496114_0004683 Ga0496114_0004683_9425_10324 290
56 3300048929 Ga0496126_0127037 Ga0496126_0127037_799_1698 290
57 3300049571 Ga0501034_0000192 Ga0501034_0000192_31314_32213 290
58 3300003187 JGI25151J46595_10015980 JGI25151J46595_100159803 291
59 3300003771 Ga0055526_1009034 Ga0055526_10090344 291
60 3300003775 Ga0055524_1005200 Ga0055524_10052005 291
61 3300003775 Ga0055524_1018532 Ga0055524_10185322 291
62 3300003781 Ga0055536_1002379 Ga0055536_10023792 291
63 3300003781 Ga0055536_1013519 Ga0055536_10135193 291
64 3300003781 Ga0055536_1041569 Ga0055536_10415691 291
65 3300003791 Ga0055530_10004848 Ga0055530_100048485 291
66 3300003794 Ga0055531_10007553 Ga0055531_100075535 291
67 3300003794 Ga0055531_10018593 Ga0055531_100185932 291
68 3300003794 Ga0055531_10023046 Ga0055531_100230462 291
69 3300003794 Ga0055531_10030643 Ga0055531_100306432 291
70 3300003794 Ga0055531_10031230 Ga0055531_100312302 291
71 3300025273 Ga0209673_1010180 Ga0209673_10101803 291
72 3300025284 Ga0209130_1007826 Ga0209130_10078263 291
73 3300025291 Ga0209675_1024873 Ga0209675_10248732 291
74 3300025292 Ga0209676_1000612 Ga0209676_10006127 291
75 3300025292 Ga0209676_1002770 Ga0209676_100277011 291
76 3300025292 Ga0209676_1003607 Ga0209676_10036073 291
77 3300025292 Ga0209676_1006509 Ga0209676_10065095 291
78 3300025292 Ga0209676_1015834 Ga0209676_10158343 291
79 3300025292 Ga0209676_1016198 Ga0209676_10161982 291
80 3300025292 Ga0209676_1041356 Ga0209676_10413562 291
81 3300025294 Ga0209025_1011950 Ga0209025_10119504 291
82 3300025294 Ga0209025_1062525 Ga0209025_10625252 291
83 3300025295 Ga0209564_1005388 Ga0209564_10053884 291
84 3300025298 Ga0209050_1004964 Ga0209050_10049647 291
85 3300025299 Ga0209256_1003876 Ga0209256_10038763 291
86 3300025299 Ga0209256_1006477 Ga0209256_10064775 291
87 3300025299 Ga0209256_1011769 Ga0209256_10117693 291
88 3300025304 Ga0209257_1000261 Ga0209257_100026169 291
89 3300025304 Ga0209257_1008033 Ga0209257_10080332 291
90 3300025304 Ga0209257_1008123 Ga0209257_10081235 291
91 3300025304 Ga0209257_1008529 Ga0209257_10085294 291
92 3300025304 Ga0209257_1017601 Ga0209257_10176012 291
93 3300031901 Ga0307406_10001776 Ga0307406_100017769 291
94 3300031901 Ga0307406_10453367 Ga0307406_104533671 291
95 3300032002 Ga0307416_100279249 Ga0307416_1002792492 291
96 3300041404 Ga0439436_0007212 Ga0439436_0007212_1702_2619 291
97 3300041406 Ga0439439_0000263 Ga0439439_0000263_5396_6313 291
98 3300041498 Ga0451841_0077621 Ga0451841_0077621_1121_2029 291
99 3300042010 Ga0439452_013662 Ga0439452_013662_295_1227 291
100 3300042015 Ga0439462_0010531 Ga0439462_0010531_174_1091 291
101 3300046460 Ga0495638_0022184 Ga0495638_0022184_2432_3370 291
102 3300047318 Ga0495636_0078109 Ga0495636_0078109_87_1019 291
103 3300048919 Ga0496116_0147269 Ga0496116_0147269_370_1287 291
104 3300048921 Ga0496118_0019390 Ga0496118_0019390_657_1574 291
105 3300048926 Ga0496123_0017921 Ga0496123_0017921_4368_5285 291
106 3300048927 Ga0496124_0057736 Ga0496124_0057736_1207_2124 291
107 3300048928 Ga0496125_0022705 Ga0496125_0022705_4508_5425 291
108 3300049513 Ga0501290_001177 Ga0501290_001177_2033_2971 291
109 3300049579 Ga0501043_0004402 Ga0501043_0004402_9520_10452 291
110 3300049762 Ga0501265_000728 Ga0501265_000728_2008_2946 291
111 3300049772 Ga0501275_000002 Ga0501275_000002_1212_2150 291
112 iso_pu_bacteria 2747842501 2748017594 291
113 iso_pu_bacteria 2919513703 2919515771 291
114 iso_pu_bacteria 2919675420 2919678450 291
115 iso_pu_bacteria 2941489479 2941491204 291
116 3300009036 Ga0105244_10018457 Ga0105244_100184572 292
117 3300015262 Ga0182007_10000142 Ga0182007_1000014241 292
118 3300015265 Ga0182005_1000456 Ga0182005_10004563 292
119 3300025728 Ga0207655_1022900 Ga0207655_10229002 292
120 3300031548 Ga0307408_100173136 Ga0307408_1001731362 292
121 3300031731 Ga0307405_10062481 Ga0307405_100624812 292
122 3300031731 Ga0307405_10070368 Ga0307405_100703682 292
123 3300031731 Ga0307405_10124610 Ga0307405_101246102 292
124 3300031824 Ga0307413_10128061 Ga0307413_101280612 292
125 3300032002 Ga0307416_100248076 Ga0307416_1002480762 292
126 3300041404 Ga0439436_0007938 Ga0439436_0007938_647_1576 292
127 3300042006 Ga0439432_003849 Ga0439432_003849_1426_2355 292
128 3300042006 Ga0439432_021373 Ga0439432_021373_1185_2114 292
129 3300042006 Ga0439432_047935 Ga0439432_047935_78_1007 292
130 3300042007 Ga0439449_0010282 Ga0439449_0010282_628_1557 292
131 3300042007 Ga0439449_0016567 Ga0439449_0016567_1608_2537 292
132 3300046539 Ga0495621_0065673 Ga0495621_0065673_180_1109 292
133 3300046615 Ga0495656_0019600 Ga0495656_0019600_1421_2350 292
134 3300047318 Ga0495636_0004360 Ga0495636_0004360_3766_4695 292
135 3300047318 Ga0495636_0024555 Ga0495636_0024555_635_1564 292
136 3300048919 Ga0496116_0061514 Ga0496116_0061514_629_1546 292
137 3300048927 Ga0496124_0210518 Ga0496124_0210518_448_1452 292
138 3300049569 Ga0501032_0028532 Ga0501032_0028532_1404_2330 292
139 3300049570 Ga0501033_0055701 Ga0501033_0055701_696_1622 292
140 3300049573 Ga0501037_0178395 Ga0501037_0178395_512_1438 292
141 3300049579 Ga0501043_0151496 Ga0501043_0151496_673_1599 292
142 3300049656 Ga0501209_047948 Ga0501209_047948_62_991 292
143 3300049822 Ga0501035_0021562 Ga0501035_0021562_3124_4050 292
144 3300049823 Ga0501044_0012823 Ga0501044_0012823_6497_7423 292
145 iso_pu_bacteria 2547132130 2547503696 292
146 iso_pu_bacteria 2576861471 2578456823 292
147 iso_pu_bacteria 2747842428 2747948544 292
148 iso_pu_bacteria 2765235840 2765580681 292
149 iso_pu_bacteria 2816332141 2816518310 292
150 iso_pu_bacteria 2818991457 2819661486 292
151 iso_pu_bacteria 2842391507 2842395070 292
152 iso_pu_bacteria 2842757796 2842760691 292
153 iso_pu_bacteria 2842780639 2842782441 292
154 iso_pu_bacteria 2852649853 2852651982 292
155 iso_pu_bacteria 2852684882 2852687378 292
156 iso_pu_bacteria 2857442823 2857444318 292
157 iso_pu_bacteria 2874220319 2874223343 292
158 iso_pu_bacteria 2919089067 2919092415 292
159 iso_pu_bacteria 2919130084 2919130811 292
160 iso_pu_bacteria 2919134579 2919137131 292
161 iso_pu_bacteria 2928496128 2928500053 292
162 iso_pu_bacteria 2929195423 2929196038 292
163 iso_pu_bacteria 2931380184 2931383237 292
164 iso_pu_bacteria 2937610967 2937614187 292
165 iso_pu_bacteria 2939589442 2939589970 292
166 iso_pu_bacteria 2939622612 2939624351 292
167 iso_pu_bacteria 2939626828 2939629291 292
168 iso_pu_bacteria 2941475908 2941478616 292
169 iso_pu_bacteria 2961047084 2961050107 292
170 iso_pu_bacteria 2961064222 2961064752 292
171 iso_pu_bacteria 2974307012 2974307430 292
172 iso_pu_bacteria 2977247770 2977248177 292
173 iso_pu_bacteria 2984514374 2984517367 292
174 iso_pu_bacteria 2987605356 2987609026 292
175 iso_pu_bacteria 8021622325 8021625976 292
176 iso_pu_bacteria 8021626552 8021628743 292
177 iso_pu_bacteria 8021648035 8021651922 292
178 3300005355 Ga0070671_100080303 Ga0070671_1000803031 293
179 3300025931 Ga0207644_10005261 Ga0207644_100052617 293
180 3300031824 Ga0307413_10035842 Ga0307413_100358422 293
181 3300031852 Ga0307410_10027097 Ga0307410_100270973 293
182 3300031911 Ga0307412_10271096 Ga0307412_102710961 293
183 3300037312 Ga0395899_0094875 Ga0395899_0094875_82_996 293
184 3300037418 Ga0395900_0165850 Ga0395900_0165850_650_1564 293
185 3300037471 Ga0395905_0009637 Ga0395905_0009637_852_1766 293
186 3300037471 Ga0395905_0574094 Ga0395905_0574094_15_929 293
187 3300038443 Ga0395901_0057155 Ga0395901_0057155_710_1624 293
188 3300048903 Ga0496100_0151593 Ga0496100_0151593_704_1618 293
189 3300048911 Ga0496108_0015258 Ga0496108_0015258_3300_4214 293
190 3300048915 Ga0496112_0368730 Ga0496112_0368730_378_1292 293
191 3300049574 Ga0501038_0013401 Ga0501038_0013401_5880_6872 293
192 3300049708 Ga0501245_009699 Ga0501245_009699_408_1370 293
193 3300049823 Ga0501044_0014548 Ga0501044_0014548_4181_5173 293
194 3300009979 Ga0105032_100895 Ga0105032_1008953 294
195 3300027665 Ga0209983_1011402 Ga0209983_10114022 294
196 3300027682 Ga0209971_1002018 Ga0209971_10020183 294
197 3300027876 Ga0209974_10016938 Ga0209974_100169383 294
198 3300041413 Ga0439465_0035034 Ga0439465_0035034_412_1323 294
199 3300042876 Ga0451577_0017404 Ga0451577_0017404_5104_6042 294
200 3300046460 Ga0495638_0041497 Ga0495638_0041497_550_1461 294
201 3300048905 Ga0496102_0537686 Ga0496102_0537686_78_989 294
202 3300005331 Ga0070670_100026652 Ga0070670_1000266523 295
203 3300005347 Ga0070668_100016074 Ga0070668_1000160744 295
204 3300005353 Ga0070669_100056306 Ga0070669_1000563063 295
205 3300005356 Ga0070674_100082809 Ga0070674_1000828092 295
206 3300005367 Ga0070667_100241187 Ga0070667_1002411872 295
207 3300005530 Ga0070679_100164646 Ga0070679_1001646462 295
208 3300005543 Ga0070672_100029711 Ga0070672_1000297113 295
209 3300006038 Ga0075365_10069826 Ga0075365_100698263 295
210 3300013100 Ga0157373_10198240 Ga0157373_101982402 295
211 3300013104 Ga0157370_10108214 Ga0157370_101082142 295
212 3300013105 Ga0157369_10108607 Ga0157369_101086073 295
213 3300015261 Ga0182006_1030700 Ga0182006_10307003 295
214 3300025909 Ga0207705_10114121 Ga0207705_101141212 295
215 3300025917 Ga0207660_10157489 Ga0207660_101574892 295
216 3300025919 Ga0207657_10015053 Ga0207657_100150533 295
217 3300025923 Ga0207681_10046497 Ga0207681_100464972 295
218 3300025925 Ga0207650_10030664 Ga0207650_100306643 295
219 3300025925 Ga0207650_10206829 Ga0207650_102068292 295
220 3300025937 Ga0207669_10139142 Ga0207669_101391422 295
221 3300025940 Ga0207691_10002013 Ga0207691_100020133 295
222 3300025945 Ga0207679_10566727 Ga0207679_105667271 295
223 3300025972 Ga0207668_10025053 Ga0207668_100250533 295
224 3300025986 Ga0207658_10173526 Ga0207658_101735262 295
225 3300032004 Ga0307414_10002016 Ga0307414_100020163 295
226 3300032004 Ga0307414_10017783 Ga0307414_100177833 295
227 3300037418 Ga0395900_0106219 Ga0395900_0106219_1921_2841 295
228 3300037471 Ga0395905_0627858 Ga0395905_0627858_25_945 295
229 3300041404 Ga0439436_0006772 Ga0439436_0006772_2524_3438 295
230 3300041413 Ga0439465_0000375 Ga0439465_0000375_1010_1924 295
231 3300041486 Ga0451807_1403101 Ga0451807_1403101_865_1779 295
232 3300041512 Ga0451853_1027231 Ga0451853_1027231_282_1196 295
233 3300041999 Ga0439433_0029675 Ga0439433_0029675_107_1021 295
234 3300042007 Ga0439449_0010232 Ga0439449_0010232_2090_3010 295
235 3300042007 Ga0439449_0060844 Ga0439449_0060844_191_1105 295
236 3300046453 Ga0495627_039079 Ga0495627_039079_22_936 295
237 3300046537 Ga0495598_0005629 Ga0495598_0005629_368_1291 295
238 3300046539 Ga0495621_0009089 Ga0495621_0009089_1627_2550 295
239 3300046558 Ga0495633_0019106 Ga0495633_0019106_1299_2213 295
240 3300046558 Ga0495633_0066021 Ga0495633_0066021_668_1624 295
241 3300046692 Ga0495671_0005638 Ga0495671_0005638_1869_2783 295
242 3300048924 Ga0496121_0002087 Ga0496121_0002087_20597_21532 295
243 3300048925 Ga0496122_0021677 Ga0496122_0021677_3697_4611 295
244 3300048926 Ga0496123_0179066 Ga0496123_0179066_50_964 295
245 3300049571 Ga0501034_0035452 Ga0501034_0035452_1223_2152 295
246 3300050491 nmdc:mga00v17_62917_c1 nmdc:mga00v17_62917_c1_1231_2151 295
247 3300053161 Ga0500634_0000139 Ga0500634_0000139_6629_7543 295
248 2162886007 SwRhRL2b_contig_2252835 SwRhRL2b_0259.00004410 296
249 3300002773 JGI25152J39213_1004043 JGI25152J39213_10040431 296
250 3300002774 JGI25150J39212_1000347 JGI25150J39212_100034719 296
251 3300003187 JGI25151J46595_10008956 JGI25151J46595_100089561 296
252 3300003215 JGI25153J46596_10008814 JGI25153J46596_100088141 296
253 3300003320 rootH2_10087598 rootH2_100875982 296
254 3300003322 rootL2_10176085 rootL2_101760852 296
255 3300003323 rootH1_10018072 rootH1_100180722 296
256 3300003771 Ga0055526_1000003 Ga0055526_1000003216 296
257 3300003771 Ga0055526_1000247 Ga0055526_100024719 296
258 3300003773 Ga0055537_1000055 Ga0055537_10000553 296
259 3300003773 Ga0055537_1001998 Ga0055537_10019985 296
260 3300003775 Ga0055524_1000002 Ga0055524_1000002151 296
261 3300003781 Ga0055536_1002218 Ga0055536_10022189 296
262 3300003781 Ga0055536_1002224 Ga0055536_10022249 296
263 3300003784 Ga0055534_1000062 Ga0055534_10000623 296
264 3300003784 Ga0055534_1000599 Ga0055534_10005993 296
265 3300003790 Ga0055528_1000001 Ga0055528_1000001151 296
266 3300003790 Ga0055528_1000407 Ga0055528_100040730 296
267 3300003791 Ga0055530_10001944 Ga0055530_1000194412 296
268 3300003791 Ga0055530_10001946 Ga0055530_1000194612 296
269 3300003794 Ga0055531_10005005 Ga0055531_100050052 296
270 3300003794 Ga0055531_10005432 Ga0055531_100054323 296
271 3300003794 Ga0055531_10016059 Ga0055531_100160592 296
272 3300003794 Ga0055531_10019980 Ga0055531_100199802 296
273 3300003794 Ga0055531_10023979 Ga0055531_100239792 296
274 3300003856 Ga0058692_1000004 Ga0058692_10000043 296
275 3300003856 Ga0058692_1000078 Ga0058692_100007859 296
276 3300005289 Ga0065704_10081143 Ga0065704_100811433 296
277 3300005331 Ga0070670_100026101 Ga0070670_1000261013 296
278 3300005456 Ga0070678_100015476 Ga0070678_1000154764 296
279 3300005548 Ga0070665_100120715 Ga0070665_1001207153 296
280 3300005985 Ga0081539_10028703 Ga0081539_100287033 296
281 3300006051 Ga0075364_10072318 Ga0075364_100723182 296
282 3300006186 Ga0075369_10066888 Ga0075369_100668882 296
283 3300009011 Ga0105251_10002153 Ga0105251_1000215312 296
284 3300009148 Ga0105243_10011087 Ga0105243_100110873 296
285 3300009148 Ga0105243_10017759 Ga0105243_100177592 296
286 3300013100 Ga0157373_10402092 Ga0157373_104020921 296
287 3300013102 Ga0157371_10000509 Ga0157371_100005093 296
288 3300013104 Ga0157370_10026214 Ga0157370_100262142 296
289 3300013104 Ga0157370_10161938 Ga0157370_101619382 296
290 3300013104 Ga0157370_10259251 Ga0157370_102592512 296
291 3300013105 Ga0157369_10040515 Ga0157369_100405153 296
292 3300014497 Ga0182008_10001256 Ga0182008_100012563 296
293 3300014497 Ga0182008_10012626 Ga0182008_100126261 296
294 3300015261 Ga0182006_1007230 Ga0182006_10072305 296
295 3300015261 Ga0182006_1013978 Ga0182006_10139782 296
296 3300015265 Ga0182005_1011989 Ga0182005_10119895 296
297 3300015689 Ga0183360_10003 Ga0183360_10003411 296
298 3300017792 Ga0163161_10011448 Ga0163161_100114483 296
299 3300017792 Ga0163161_10097576 Ga0163161_100975762 296
300 3300025245 Ga0207425_1003291 Ga0207425_10032914 296
301 3300025258 Ga0209129_1000150 Ga0209129_1000150106 296
302 3300025263 Ga0209565_1000002 Ga0209565_1000002429 296
303 3300025263 Ga0209565_1000050 Ga0209565_100005092 296
304 3300025263 Ga0209565_1006988 Ga0209565_10069882 296
305 3300025273 Ga0209673_1000002 Ga0209673_1000002429 296
306 3300025273 Ga0209673_1000199 Ga0209673_100019969 296
307 3300025284 Ga0209130_1003132 Ga0209130_10031324 296
308 3300025291 Ga0209675_1000002 Ga0209675_1000002429 296
309 3300025291 Ga0209675_1000007 Ga0209675_1000007418 296
310 3300025292 Ga0209676_1000018 Ga0209676_1000018151 296
311 3300025292 Ga0209676_1000168 Ga0209676_1000168118 296
312 3300025292 Ga0209676_1002246 Ga0209676_10022462 296
313 3300025294 Ga0209025_1000048 Ga0209025_1000048106 296
314 3300025295 Ga0209564_1000004 Ga0209564_1000004430 296
315 3300025295 Ga0209564_1000061 Ga0209564_1000061191 296
316 3300025297 Ga0209758_1000056 Ga0209758_1000056106 296
317 3300025298 Ga0209050_1000382 Ga0209050_100038281 296
318 3300025298 Ga0209050_1000424 Ga0209050_100042456 296
319 3300025298 Ga0209050_1009784 Ga0209050_10097844 296
320 3300025298 Ga0209050_1025414 Ga0209050_10254142 296
321 3300025299 Ga0209256_1000004 Ga0209256_1000004430 296
322 3300025299 Ga0209256_1009603 Ga0209256_10096034 296
323 3300025299 Ga0209256_1022557 Ga0209256_10225572 296
324 3300025303 Ga0209051_1001153 Ga0209051_100115311 296
325 3300025304 Ga0209257_1000035 Ga0209257_1000035151 296
326 3300025304 Ga0209257_1000046 Ga0209257_1000046387 296
327 3300025304 Ga0209257_1000147 Ga0209257_100014716 296
328 3300025304 Ga0209257_1002362 Ga0209257_10023622 296
329 3300025304 Ga0209257_1020906 Ga0209257_10209062 296
330 3300025728 Ga0207655_1094326 Ga0207655_10943262 296
331 3300025735 Ga0207713_1000585 Ga0207713_100058521 296
332 3300025935 Ga0207709_10000528 Ga0207709_100005284 296
333 3300025935 Ga0207709_10019616 Ga0207709_100196164 296
334 3300025972 Ga0207668_10008323 Ga0207668_100083233 296
335 3300026121 Ga0207683_10024728 Ga0207683_100247283 296
336 3300027312 Ga0209371_1000018 Ga0209371_1000018389 296
337 3300027312 Ga0209371_1000025 Ga0209371_1000025261 296
338 3300028379 Ga0268266_10336320 Ga0268266_103363202 296
339 3300030500 Ga0268256_1000016 Ga0268256_1000016389 296
340 3300030500 Ga0268256_1000027 Ga0268256_1000027261 296
341 3300030742 Ga0316183_1093021 Ga0316183_10930213 296
342 3300038705 Ga0237819_00014 Ga0237819_00014_9428_10345 296
343 3300041509 Ga0451843_0091747 Ga0451843_0091747_312_1229 296
344 3300042533 Ga0450901_002318 Ga0450901_002318_783_1700 296
345 3300046453 Ga0495627_016611 Ga0495627_016611_868_1785 296
346 3300046458 Ga0495591_028917 Ga0495591_028917_53_970 296
347 3300046460 Ga0495638_0026526 Ga0495638_0026526_1980_2897 296
348 3300046501 Ga0495607_0044611 Ga0495607_0044611_1215_2135 296
349 3300046512 Ga0495610_0007929 Ga0495610_0007929_4699_5616 296
350 3300046512 Ga0495610_0036346 Ga0495610_0036346_871_1791 296
351 3300046518 Ga0495631_0001419 Ga0495631_0001419_12832_13749 296
352 3300046522 Ga0495643_0001536 Ga0495643_0001536_17679_18596 296
353 3300046525 Ga0495663_0005530 Ga0495663_0005530_1755_2672 296
354 3300046558 Ga0495633_0045060 Ga0495633_0045060_807_1724 296
355 3300046660 Ga0495625_0101188 Ga0495625_0101188_1049_1966 296
356 3300046660 Ga0495625_0203136 Ga0495625_0203136_376_1293 296
357 3300046810 Ga0495660_0019847 Ga0495660_0019847_2052_2969 296
358 3300047320 Ga0495672_0001653 Ga0495672_0001653_18611_19528 296
359 3300047320 Ga0495672_0056764 Ga0495672_0056764_662_1666 296
360 3300047472 Ga0495686_0002109 Ga0495686_0002109_941_1858 296
361 3300047472 Ga0495686_0013977 Ga0495686_0013977_3844_4761 296
362 3300048907 Ga0496104_0073615 Ga0496104_0073615_1350_2354 296
363 3300048914 Ga0496111_0213418 Ga0496111_0213418_317_1234 296
364 3300048919 Ga0496116_0023331 Ga0496116_0023331_3040_3960 296
365 3300048920 Ga0496117_0003169 Ga0496117_0003169_2104_3021 296
366 3300048920 Ga0496117_0027710 Ga0496117_0027710_3356_4270 296
367 3300048920 Ga0496117_0059269 Ga0496117_0059269_1007_1924 296
368 3300048920 Ga0496117_0065133 Ga0496117_0065133_849_1766 296
369 3300048921 Ga0496118_0000661 Ga0496118_0000661_53338_54255 296
370 3300048921 Ga0496118_0003383 Ga0496118_0003383_17093_18010 296
371 3300048921 Ga0496118_0005830 Ga0496118_0005830_706_1623 296
372 3300048921 Ga0496118_0050665 Ga0496118_0050665_860_1777 296
373 3300048921 Ga0496118_0066382 Ga0496118_0066382_884_1798 296
374 3300048921 Ga0496118_0071711 Ga0496118_0071711_714_1631 296
375 3300048921 Ga0496118_0115326 Ga0496118_0115326_296_1210 296
376 3300048922 Ga0496119_0000192 Ga0496119_0000192_17657_18661 296
377 3300048922 Ga0496119_0002158 Ga0496119_0002158_18977_19891 296
378 3300048923 Ga0496120_0001184 Ga0496120_0001184_18998_19912 296
379 3300048923 Ga0496120_0002178 Ga0496120_0002178_17718_18722 296
380 3300048924 Ga0496121_0037197 Ga0496121_0037197_2733_3737 296
381 3300048925 Ga0496122_0001623 Ga0496122_0001623_15197_16111 296
382 3300048925 Ga0496122_0002776 Ga0496122_0002776_21112_22032 296
383 3300048925 Ga0496122_0004567 Ga0496122_0004567_2034_2951 296
384 3300048925 Ga0496122_0024738 Ga0496122_0024738_3791_4708 296
385 3300048925 Ga0496122_0128713 Ga0496122_0128713_658_1575 296
386 3300048926 Ga0496123_0001282 Ga0496123_0001282_19010_19924 296
387 3300048926 Ga0496123_0002342 Ga0496123_0002342_2130_3050 296
388 3300048926 Ga0496123_0029171 Ga0496123_0029171_2325_3242 296
389 3300048926 Ga0496123_0106558 Ga0496123_0106558_40_957 296
390 3300048927 Ga0496124_0000006 Ga0496124_0000006_510582_511502 296
391 3300048927 Ga0496124_0002117 Ga0496124_0002117_25135_26052 296
392 3300048927 Ga0496124_0002767 Ga0496124_0002767_2356_3270 296
393 3300048927 Ga0496124_0006154 Ga0496124_0006154_587_1591 296
394 3300048927 Ga0496124_0021077 Ga0496124_0021077_1327_2244 296
395 3300048927 Ga0496124_0027891 Ga0496124_0027891_2540_3457 296
396 3300048927 Ga0496124_0096569 Ga0496124_0096569_685_1602 296
397 3300048927 Ga0496124_0152507 Ga0496124_0152507_189_1106 296
398 3300048928 Ga0496125_0005651 Ga0496125_0005651_1474_2391 296
399 3300048928 Ga0496125_0023491 Ga0496125_0023491_306_1310 296
400 3300048928 Ga0496125_0059969 Ga0496125_0059969_1921_2850 296
401 3300048928 Ga0496125_0210892 Ga0496125_0210892_318_1235 296
402 3300048929 Ga0496126_0005622 Ga0496126_0005622_1964_2968 296
403 3300048929 Ga0496126_0082454 Ga0496126_0082454_1079_1993 296
404 3300048929 Ga0496126_0127338 Ga0496126_0127338_716_1633 296
405 3300048929 Ga0496126_0132167 Ga0496126_0132167_144_1061 296
406 3300049571 Ga0501034_0016434 Ga0501034_0016434_4701_5621 296
407 iso_pu_bacteria 2995948881 2995953710 296

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03279

Lip_A_acyltrans

Bacterial lipid A biosynthesis acyltransferase

28

324

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kn7-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii 0.9543 37 281
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.8662 1 281
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.8646 37 278
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.8231 37 278
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.7897 1 281
ID Description Score Start End Superfamily
af_Q9W5H8_10_164_1.10.8.1310 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.674 37 72 1.10.8.1310
af_P31119_15_138_3.40.1010.10 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.6563 100 220 3.40.1010.10
af_Q2FXJ7_19_144_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.6321 107 220 3.40.50.2000
af_Q54EU4_95_228_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.6016 107 220 3.40.50.620
af_P31119_15_138_3.40.1010.10 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.5942 100 220 3.40.1010.10
ID Description Score Start End GO Terms
AF-A0A3C0GV01-F1-model_v4 Lipid A biosynthesis lauroyl acyltransferase 0.9837 55 296 GO:0005886
GO:0009247
GO:0016746
AF-A0A1S1XLN1-F1-model_v4 deleted 0.9782 1 252
AF-A0A3C0GV01-F1-model_v4 Lipid A biosynthesis lauroyl acyltransferase 0.9718 55 296 GO:0005886
GO:0009247
GO:0016746
AF-A0A3B1BXE1-F1-model_v4 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) 0.9614 61 287 GO:0005886
GO:0008610
GO:0016746
GO:1901137
AF-A0A3C1VT91-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9614 77 285 GO:0005886
GO:0009247
GO:0016746

Feature Viewer

pLDDT pTM Quality
92.27 0.9 High
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Predicted Structure (AlphaFold2)

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