F435372

General Info

Members Datasets Scaffolds Average Seq Length
403 224 364 378

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10082162|Ga0105240_100821625
Length 413
Sequence MGLKPIAMILCTSPQNQNSSSIFERFRVNLQLKMKAFYGDLKLGILGGGQLGRMLIQQAINYNVTVKVLDPDREAPCRKLCDEFTVGSLGDYETVYKFGKKVDLLTIEIEKVNVDALEQLEKEGVLVYPQPRIIRLIQDKGLQKQFFKENNIPTAEFKVISSIDDLKQQTDIPYPYIQKLRRDGYDGRGVYKVSDETYLANAFKEPSLVERLIDFEKEIAVIVARNESGEVSTFPLVEMEFNPDVNLVEFLISPSTLSFEIQQEAERIAKKIAEDLKIVGLLAVEMFLTKDGQILVNELAPRPHNSGHQSIEGNVVSQFEQHLRAIFNQPMGDTACLGNAVMINVLGEPGFEGPAVYQGIEKILKCPGVYVHLYGKALTKPFRKMGHVTVVDNDREKAIEKARFVQKTLKVIS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
5 2738541283 Pedobacter sp. OK701 Isolate Unclassified
6 2738541284 Pedobacter sp. YR016 Isolate Unclassified
7 2738541302 Pedobacter sp. CF074 Isolate Unclassified
8 2738543023 Pedobacter sp. OK628 Isolate Unclassified
9 2739367651 Pedobacter sp. OK291 Isolate Unclassified
10 2739367656 Pedobacter sp. CF523 Isolate Unclassified
11 2739367663 Pedobacter sp. YR510 Isolate Unclassified
12 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
13 2818991437 Pedobacter terrae 518 Isolate Unclassified
14 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
15 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
16 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
17 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
18 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
19 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
20 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
21 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
22 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
23 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
24 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
25 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
26 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
27 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
28 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
29 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
30 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
31 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
32 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
33 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
34 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
35 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
36 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
37 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
38 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
39 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
40 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
41 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
42 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
43 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
44 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
45 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
46 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
47 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
48 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
49 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
50 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
51 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
52 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
53 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
54 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
55 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
56 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
57 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
58 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
59 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
60 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
61 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
62 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
63 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
64 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
65 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
66 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
67 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
68 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
69 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
70 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
71 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
72 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
73 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
74 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
75 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
76 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
77 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
78 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
79 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
80 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
81 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
82 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
83 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
84 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
85 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
86 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
87 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
88 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
89 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
90 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
91 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
92 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
93 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
94 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
95 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
96 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
97 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
98 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
99 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
100 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
101 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
102 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
103 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
104 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
105 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
106 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
107 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
108 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
109 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
110 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
111 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
112 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
113 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
114 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
115 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
116 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
117 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
120 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
121 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
149 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
151 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
152 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
153 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
154 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
155 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
156 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
157 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
158 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
159 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
160 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
161 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
162 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
163 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
164 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
165 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
166 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
167 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
168 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
169 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
170 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
171 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
172 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
173 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
174 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
175 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
176 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
177 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
178 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
179 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
180 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
181 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
182 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
183 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
184 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
185 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
186 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
187 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
188 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
189 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
190 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
191 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
192 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
193 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
194 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
195 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
196 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
197 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
198 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
199 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
200 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
201 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
202 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
203 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
204 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
205 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
206 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
207 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
208 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
209 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
210 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
211 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
212 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
213 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
214 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
215 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
216 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
217 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
218 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
219 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
220 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
221 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
222 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
223 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
224 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.83
Metatranscriptomes 0
Isolates 10.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.91
Nodule 0
Rhizoplane 0.25
Rhizosphere 71.96
Stem 0
Stem Tuber 0
Unclassified 15.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3071305 2162886007 Bacteria 2030
2 JGI24736J21556_1005660 3300001904 Bacteria 2111
3 JGI24735J21928_10000001 3300002067 Bacteria 650042
4 JGI24735J21928_10027509 3300002067 Bacteria 1704
5 JGI25162J39368_1000427 3300002737 Bacteria 33903
6 JGI25164J39214_1001353 3300002772 Bacteria 5969
7 JGI25152J39213_1000894 3300002773 Bacteria 14641
8 JGI25150J39212_1000051 3300002774 Bacteria 72281
9 JGI25151J46595_10000205 3300003187 Bacteria 72281
10 JGI25165J46597_1000548 3300003214 Bacteria 34311
11 JGI25153J46596_10000144 3300003215 Bacteria 72281
12 rootH1_10001294 3300003316 Bacteria 31579
13 rootH1_10024721 3300003316 Bacteria 19323
14 rootH1_10044460 3300003316 Bacteria 10176
15 rootH1_10044460 3300003323 Bacteria 12555
16 rootH1_10075048 3300003316 Bacteria 2268
17 rootH1_10117365 3300003316 Bacteria 2962
18 rootH2_10006566 3300003320 Bacteria 99379
19 rootH2_10012128 3300003320 Bacteria 20508
20 rootH2_10056267 3300003320 Bacteria 3046
21 rootH2_10278939 3300003320 Bacteria 1439
22 rootL2_10006050 3300003322 Bacteria 9527
23 rootL2_10115235 3300003322 Bacteria 26947
24 rootL2_10195977 3300003322 Bacteria 4796
25 rootH1_10003667 3300003323 Bacteria 128566
26 rootH1_10020954 3300003323 Bacteria 5592
27 rootH1_10025005 3300003323 Bacteria 27131
28 rootH1_10029634 3300003323 Bacteria 17261
29 rootH1_10100821 3300003316 Bacteria 2191
30 rootH1_10100821 3300003323 Bacteria 8353
31 rootH1_10103210 3300003323 Bacteria 2486
32 rootH1_10112363 3300003323 Bacteria 3867
33 rootH1_10113739 3300003323 Bacteria 5956
34 rootH1_10129216 3300003323 Bacteria 3739
35 rootH1_10155243 3300003323 Bacteria 5013
36 rootH1_10174015 3300003323 Bacteria 2517
37 rootH1_10212103 3300003323 Bacteria 2394
38 Ga0055536_1000030 3300003781 Bacteria 153926
39 Ga0055530_10000723 3300003791 Bacteria 27721
40 Ga0055531_10000339 3300003794 Bacteria 46111
41 Ga0065165_1000417 3300005262 Bacteria 67578
42 Ga0065714_10002361 3300005288 Bacteria 37849
43 Ga0065714_10003305 3300005288 Bacteria 11301
44 Ga0065714_10004634 3300005288 Bacteria 6657
45 Ga0065714_10005722 3300005288 Bacteria 5520
46 Ga0065714_10064513 3300005288 Bacteria 45040
47 Ga0065714_10067901 3300005288 Bacteria 5122
48 Ga0065704_10071977 3300005289 Bacteria 9468
49 Ga0065704_10079977 3300005289 Bacteria 4012
50 Ga0065715_10089705 3300005293 Bacteria 8839
51 Ga0070658_10000045 3300005327 Bacteria 130728
52 Ga0070658_10011815 3300005327 Bacteria 7008
53 Ga0070676_10000502 3300005328 Bacteria 18694
54 Ga0070680_100039423 3300005336 Bacteria 3823
55 Ga0068868_100007520 3300005338 Bacteria 7762
56 Ga0070660_100032627 3300005339 Bacteria 3920
57 Ga0070671_100015008 3300005355 Bacteria 6256
58 Ga0070673_100205743 3300005364 Bacteria 1697
59 Ga0070659_100000100 3300005366 Bacteria 63786
60 Ga0070659_100007893 3300005366 Bacteria 7750
61 Ga0070662_100000103 3300005457 Bacteria 46838
62 Ga0070662_100285626 3300005457 Bacteria 1336
63 Ga0070681_10005489 3300005458 Bacteria 12250
64 Ga0068867_100002497 3300005459 Bacteria 12925
65 Ga0070679_100002090 3300005530 Bacteria 17981
66 Ga0070679_100096499 3300005530 Bacteria 2944
67 Ga0070684_100048155 3300005535 Bacteria 3697
68 Ga0068853_100013613 3300005539 Bacteria 6647
69 Ga0070665_100000083 3300005548 Bacteria 181044
70 Ga0068855_100000122 3300005563 Bacteria 97622
71 Ga0068855_100003118 3300005563 Bacteria 20278
72 Ga0068855_100026390 3300005563 Bacteria 6948
73 Ga0068855_100092416 3300005563 Bacteria 3490
74 Ga0068854_100103992 3300005578 Bacteria 2133
75 Ga0068856_100011720 3300005614 Bacteria 8503
76 Ga0068856_100013242 3300005614 Bacteria 7988
77 Ga0068856_100030304 3300005614 Bacteria 5289
78 Ga0068856_100118536 3300005614 Bacteria 2648
79 Ga0068856_100360567 3300005614 Bacteria 1472
80 Ga0068852_100004713 3300005616 Bacteria 9676
81 Ga0068852_100150443 3300005616 Bacteria 2164
82 Ga0068863_100047616 3300005841 Bacteria 4066
83 Ga0075366_10002823 3300006195 Bacteria 8994
84 Ga0075366_10018005 3300006195 Bacteria 4076
85 Ga0075366_10037615 3300006195 Bacteria 2858
86 Ga0075366_10047906 3300006195 Bacteria 2533
87 Ga0097621_100000041 3300006237 Bacteria 66329
88 Ga0068871_100003606 3300006358 Bacteria 10633
89 Ga0075428_100038854 3300006844 Bacteria 5237
90 Ga0068865_100001976 3300006881 Bacteria 12108
91 Ga0105240_10000010 3300009093 Bacteria 537830
92 Ga0105240_10012588 3300009093 Bacteria 11667
93 Ga0105240_10014628 3300009093 Bacteria 10706
94 Ga0105240_10082162 3300009093 Bacteria 3957
95 Ga0105240_10105415 3300009093 Bacteria 3423
96 Ga0105240_10118561 3300009093 Bacteria 3189
97 Ga0105240_10169618 3300009093 Bacteria 2586
98 Ga0105240_10308029 3300009093 Bacteria 1809
99 Ga0111539_10001883 3300009094 Bacteria 27869
100 Ga0111539_10026626 3300009094 Bacteria 7069
101 Ga0105243_10000018 3300009148 Bacteria 227618
102 Ga0105241_10000775 3300009174 Bacteria 24313
103 Ga0105241_10002686 3300009174 Bacteria 13328
104 Ga0105241_10002915 3300009174 Bacteria 12783
105 Ga0105242_10013698 3300009176 Bacteria 6275
106 Ga0105242_10443348 3300009176 Bacteria 1222
107 Ga0105237_10000227 3300009545 Bacteria 79785
108 Ga0105237_10002528 3300009545 Bacteria 22649
109 Ga0105237_10021405 3300009545 Bacteria 6648
110 Ga0105237_10042234 3300009545 Bacteria 4599
111 Ga0105237_10164920 3300009545 Bacteria 2214
112 Ga0105237_10189798 3300009545 Bacteria 2055
113 Ga0105237_10193209 3300009545 Bacteria 2035
114 Ga0105238_10037862 3300009551 Bacteria 4901
115 Ga0105249_10181011 3300009553 Bacteria 2051
116 Ga0105239_10000002 3300010375 Bacteria 610298
117 Ga0105239_10000006 3300010375 Bacteria 442319
118 Ga0105239_10000578 3300010375 Bacteria 52273
119 Ga0105239_10002369 3300010375 Bacteria 24039
120 Ga0105239_10003720 3300010375 Bacteria 18575
121 Ga0105239_10012355 3300010375 Bacteria 9510
122 Ga0105239_10100770 3300010375 Bacteria 3195
123 Ga0105239_10329146 3300010375 Bacteria 1723
124 Ga0157373_10000240 3300013100 Bacteria 44977
125 Ga0157373_10000265 3300013100 Bacteria 42223
126 Ga0157373_10003717 3300013100 Bacteria 11545
127 Ga0157373_10012120 3300013100 Bacteria 6337
128 Ga0157373_10043392 3300013100 Bacteria 3212
129 Ga0157371_10000034 3300013102 Bacteria 223947
130 Ga0157371_10000141 3300013102 Bacteria 104396
131 Ga0157371_10000869 3300013102 Bacteria 34259
132 Ga0157371_10002042 3300013102 Bacteria 19900
133 Ga0157371_10016476 3300013102 Bacteria 5515
134 Ga0157370_10006991 3300013104 Bacteria 12324
135 Ga0157370_10007182 3300013104 Bacteria 12153
136 Ga0157370_10022321 3300013104 Bacteria 6299
137 Ga0157370_10110159 3300013104 Bacteria 2574
138 Ga0157369_10000002 3300013105 Bacteria 524510
139 Ga0157369_10029666 3300013105 Bacteria 6042
140 Ga0157369_10057868 3300013105 Bacteria 4181
141 Ga0157369_10236973 3300013105 Bacteria 1906
142 Ga0157374_10000129 3300013296 Bacteria 69468
143 Ga0157374_10003215 3300013296 Bacteria 13719
144 Ga0157374_10044625 3300013296 Bacteria 4097
145 Ga0157374_10354031 3300013296 Bacteria 1459
146 Ga0157378_10020455 3300013297 Bacteria 5819
147 Ga0163162_10000068 3300013306 Bacteria 97068
148 Ga0163162_10000330 3300013306 Bacteria 43379
149 Ga0157372_10000016 3300013307 Bacteria 220177
150 Ga0157372_10000061 3300013307 Bacteria 119814
151 Ga0157372_10001333 3300013307 Bacteria 26670
152 Ga0157372_10008429 3300013307 Bacteria 10944
153 Ga0157372_10184885 3300013307 Bacteria 2413
154 Ga0157372_10435164 3300013307 Bacteria 1529
155 Ga0157375_10015866 3300013308 Bacteria 6751
156 Ga0157380_10000002 3300014326 Bacteria 236273
157 Ga0182008_10000010 3300014497 Bacteria 301527
158 Ga0182008_10000726 3300014497 Bacteria 23436
159 Ga0182008_10001151 3300014497 Bacteria 18248
160 Ga0182008_10011814 3300014497 Bacteria 4631
161 Ga0182006_1000505 3300015261 Bacteria 29828
162 Ga0182006_1002042 3300015261 Bacteria 11329
163 Ga0182006_1002694 3300015261 Bacteria 9542
164 Ga0182006_1010771 3300015261 Bacteria 4050
165 Ga0182007_10000001 3300015262 Bacteria 1127301
166 Ga0182007_10007336 3300015262 Bacteria 4631
167 Ga0183373_1003 3300015682 Bacteria 558813
168 Ga0163161_10001536 3300017792 Bacteria 17042
169 Ga0163161_10008145 3300017792 Bacteria 7248
170 Ga0207427_100090 3300025231 Bacteria 133759
171 Ga0209437_100034 3300025233 Bacteria 494007
172 Ga0209437_100070 3300025233 Bacteria 306718
173 Ga0207425_1000007 3300025245 Bacteria 777411
174 Ga0209026_1000526 3300025250 Bacteria 26962
175 Ga0209026_1002750 3300025250 Bacteria 6291
176 Ga0209026_1006847 3300025250 Bacteria 2696
177 Ga0209129_1000006 3300025258 Bacteria 777761
178 Ga0209129_1005705 3300025258 Bacteria 4291
179 Ga0209233_1000038 3300025261 Bacteria 548972
180 Ga0209233_1011651 3300025261 Bacteria 2585
181 Ga0209455_1001458 3300025272 Bacteria 10640
182 Ga0209676_1000001 3300025292 Bacteria 1852142
183 Ga0209025_1000025 3300025294 Bacteria 524454
184 Ga0209758_1000016 3300025297 Bacteria 778557
185 Ga0209050_1000018 3300025298 Bacteria 723263
186 Ga0209050_1001156 3300025298 Bacteria 31568
187 Ga0209050_1014538 3300025298 Bacteria 3381
188 Ga0209257_1000007 3300025304 Bacteria 1564415
189 Ga0207647_10000062 3300025904 Bacteria 83809
190 Ga0207647_10000263 3300025904 Bacteria 43120
191 Ga0207647_10045170 3300025904 Bacteria 2749
192 Ga0207645_10000224 3300025907 Bacteria 46998
193 Ga0207705_10000080 3300025909 Bacteria 119562
194 Ga0207654_10002041 3300025911 Bacteria 10362
195 Ga0207654_10006843 3300025911 Bacteria 5739
196 Ga0207654_10015451 3300025911 Bacteria 3963
197 Ga0207654_10098536 3300025911 Bacteria 1796
198 Ga0207707_10004744 3300025912 Bacteria 11920
199 Ga0207695_10000019 3300025913 Bacteria 732137
200 Ga0207695_10007270 3300025913 Bacteria 14142
201 Ga0207695_10017772 3300025913 Bacteria 8254
202 Ga0207695_10019865 3300025913 Bacteria 7720
203 Ga0207695_10118111 3300025913 Bacteria 2623
204 Ga0207671_10000515 3300025914 Bacteria 52421
205 Ga0207671_10018071 3300025914 Bacteria 5419
206 Ga0207671_10097453 3300025914 Bacteria 2223
207 Ga0207671_10104195 3300025914 Bacteria 2152
208 Ga0207671_10116841 3300025914 Bacteria 2035
209 Ga0207660_10015516 3300025917 Bacteria 5029
210 Ga0207657_10028553 3300025919 Bacteria 5088
211 Ga0207657_10057018 3300025919 Bacteria 3369
212 Ga0207657_10140810 3300025919 Bacteria 1971
213 Ga0207657_10289249 3300025919 Bacteria 1300
214 Ga0207690_10000381 3300025932 Bacteria 29417
215 Ga0207690_10045776 3300025932 Bacteria 2893
216 Ga0207706_10000851 3300025933 Bacteria 31416
217 Ga0207709_10000021 3300025935 Bacteria 386722
218 Ga0207704_10000037 3300025938 Bacteria 93990
219 Ga0207667_10000020 3300025949 Bacteria 374770
220 Ga0207667_10004885 3300025949 Bacteria 16364
221 Ga0207667_10092191 3300025949 Bacteria 3129
222 Ga0207651_10025431 3300025960 Bacteria 3679
223 Ga0207712_10150646 3300025961 Bacteria 1796
224 Ga0207640_10102795 3300025981 Bacteria 2008
225 Ga0207677_10003306 3300026023 Bacteria 8525
226 Ga0207677_10050958 3300026023 Bacteria 2804
227 Ga0207703_10062555 3300026035 Bacteria 3049
228 Ga0207639_10011268 3300026041 Bacteria 6204
229 Ga0207702_10000273 3300026078 Bacteria 59343
230 Ga0207702_10021553 3300026078 Bacteria 5335
231 Ga0207702_10022857 3300026078 Bacteria 5188
232 Ga0207702_10226178 3300026078 Bacteria 1746
233 Ga0207648_10000241 3300026089 Bacteria 58974
234 Ga0207674_10212054 3300026116 Bacteria 1886
235 Ga0207683_10006368 3300026121 Bacteria 10109
236 Ga0207698_10004698 3300026142 Bacteria 8353
237 Ga0207698_10095727 3300026142 Bacteria 2445
238 Ga0207428_10033182 3300027907 Unclassified 4242
239 Ga0268266_10000095 3300028379 Bacteria 186169
240 Ga0307517_10000719 3300028786 Bacteria 56987
241 Ga0307515_10000012 3300028794 Bacteria 582232
242 Ga0307515_10004038 3300028794 Bacteria 30636
243 Ga0307515_10006107 3300028794 Bacteria 24219
244 Ga0307515_10011558 3300028794 Bacteria 16742
245 Ga0307515_10116495 3300028794 Unclassified 3067
246 Ga0316176_1055852 3300030732 Bacteria 12325
247 Ga0316183_1209124 3300030742 Bacteria 21351
248 Ga0316181_1051627 3300030744 Bacteria 18287
249 Ga0307513_10075135 3300031456 Bacteria 3511
250 Ga0307509_10016710 3300031507 Bacteria 8479
251 Ga0307509_10027500 3300031507 Bacteria 6328
252 Ga0307509_10037505 3300031507 Bacteria 5298
253 Ga0307408_100000357 3300031548 Bacteria 42591
254 Ga0307408_100001180 3300031548 Bacteria 19789
255 Ga0307408_100002516 3300031548 Bacteria 12815
256 Ga0307408_100121656 3300031548 Unclassified 2023
257 Ga0307405_10000026 3300031731 Bacteria 118954
258 Ga0307405_10024675 3300031731 Bacteria 3439
259 Ga0307413_10108226 3300031824 Bacteria 1855
260 Ga0307410_10147399 3300031852 Bacteria 1748
261 Ga0307407_10000032 3300031903 Bacteria 87003
262 Ga0307412_10000018 3300031911 Bacteria 284374
263 Ga0307412_10000415 3300031911 Bacteria 26059
264 Ga0307416_100000045 3300032002 Bacteria 126832
265 Ga0307416_100024283 3300032002 Bacteria 4420
266 Ga0307414_10008062 3300032004 Bacteria 5952
267 Ga0307414_10008445 3300032004 Bacteria 5839
268 Ga0307414_10009300 3300032004 Bacteria 5636
269 Ga0307414_10101161 3300032004 Bacteria 2169
270 Ga0307414_10234916 3300032004 Bacteria 1514
271 Ga0307414_10403269 3300032004 Bacteria 1188
272 Ga0307411_10015562 3300032005 Unclassified 4277
273 Ga0307411_10256108 3300032005 Bacteria 1379
274 Ga0307415_100000558 3300032126 Bacteria 16326
275 Ga0307507_10001815 3300033179 Bacteria 46860
276 Ga0307510_10053157 3300033180 Bacteria 4261
277 Ga0373927_0010368 3300035695 Bacteria 6219
278 Ga0395899_0000002 3300037312 Bacteria 1324310
279 Ga0395899_0000283 3300037312 Bacteria 65893
280 Ga0395899_0001182 3300037312 Bacteria 23011
281 Ga0395899_0020716 3300037312 Bacteria 4986
282 Ga0395900_0000694 3300037418 Bacteria 44919
283 Ga0395900_0001938 3300037418 Bacteria 23442
284 Ga0395900_0042117 3300037418 Bacteria 4704
285 Ga0395900_0091462 3300037418 Bacteria 3127
286 Ga0395898_0022585 3300037466 Bacteria 6370
287 Ga0395905_0000841 3300037471 Bacteria 40055
288 Ga0395905_0006027 3300037471 Bacteria 12274
289 Ga0395901_0006601 3300038443 Bacteria 11724
290 Ga0395901_0094245 3300038443 Bacteria 3136
291 Ga0436361_0112067 3300039447 Bacteria 12525
292 Ga0439448_0006684 3300042005 Bacteria 3323
293 Ga0451577_0000097 3300042876 Bacteria 193351
294 Ga0451577_0021978 3300042876 Bacteria 5830
295 Ga0466969_0015787 3300044656 Bacteria 3958
296 Ga0453684_0007524 3300044712 Bacteria 19981
297 Ga0453684_0016570 3300044712 Bacteria 11505
298 Ga0451576_0005547 3300045051 Bacteria 15762
299 Ga0451576_0008086 3300045051 Bacteria 12400
300 Ga0451576_0043940 3300045051 Bacteria 4712
301 Ga0466958_0017675 3300045836 Bacteria 4129
302 Ga0495638_0000004 3300046460 Bacteria 700795
303 Ga0495650_0000014 3300046471 Bacteria 581606
304 Ga0495585_0001159 3300046492 Bacteria 21485
305 Ga0495606_0000241 3300046507 Bacteria 96663
306 Ga0495610_0000472 3300046512 Bacteria 41524
307 Ga0495610_0056680 3300046512 Bacteria 1883
308 Ga0495616_0001895 3300046513 Bacteria 14129
309 Ga0495644_0040281 3300046523 Bacteria 1761
310 Ga0495652_0059748 3300046529 Bacteria 3225
311 Ga0495652_0175510 3300046529 Bacteria 1650
312 Ga0495609_0001800 3300046538 Bacteria 13764
313 Ga0495609_0015002 3300046538 Bacteria 3631
314 Ga0495633_0000027 3300046558 Bacteria 204613
315 Ga0495668_0002237 3300046616 Bacteria 16368
316 Ga0495625_0000003 3300046660 Bacteria 686847
317 Ga0495625_0000381 3300046660 Bacteria 67732
318 Ga0495625_0001238 3300046660 Bacteria 32218
319 Ga0495625_0025624 3300046660 Bacteria 4470
320 Ga0495625_0054401 3300046660 Unclassified 2859
321 Ga0495625_0071409 3300046660 Bacteria 2436
322 Ga0495661_0003579 3300046665 Bacteria 11431
323 Ga0495661_0014257 3300046665 Bacteria 5326
324 Ga0495669_0035749 3300046684 Bacteria 2194
325 Ga0495649_0000002 3300046694 Bacteria 1093458
326 Ga0495660_0067240 3300046810 Bacteria 1909
327 Ga0495687_000785 3300047443 Bacteria 34129
328 Ga0495686_0002723 3300047472 Bacteria 16166
329 Ga0495686_0004577 3300047472 Bacteria 11288
330 Ga0495686_0138368 3300047472 Bacteria 1438
331 Ga0496116_0002707 3300048919 Bacteria 18248
332 Ga0496117_0001260 3300048920 Bacteria 37607
333 Ga0496118_0040640 3300048921 Bacteria 3695
334 Ga0496122_0000789 3300048925 Bacteria 60958
335 Ga0496122_0007970 3300048925 Bacteria 11578
336 Ga0496123_0002415 3300048926 Bacteria 23304
337 Ga0496123_0058872 3300048926 Bacteria 2488
338 Ga0495682_0081845 3300049460 Bacteria 1161
339 Ga0501300_001906 3300049523 Bacteria 3113
340 Ga0501202_007091 3300049652 Bacteria 2020
341 Ga0501223_000815 3300049663 Bacteria 7366
342 Ga0501236_000105 3300049670 Bacteria 7796
343 Ga0501247_001148 3300049677 Bacteria 2453
344 Ga0501257_010151 3300049686 Bacteria 2133
345 Ga0501257_010471 3300049686 Bacteria 2104
346 Ga0501264_000155 3300049761 Bacteria 10971
347 nmdc:mga0k408_11241_c1 3300050493 Bacteria 4866
348 nmdc:mga0k408_1219_c1 3300050493 Bacteria 14084
349 nmdc:mga0k408_2497_c1 3300050493 Bacteria 4079
350 nmdc:mga0k408_40564_c1 3300050493 Bacteria 2679
351 nmdc:mga08y16_20139_c1 3300050511 Bacteria 7040
352 Ga0500635_0000332 3300053080 Bacteria 16185
353 Ga0500635_0002836 3300053080 Bacteria 4308
354 Ga0500651_0001157 3300053093 Bacteria 13091
355 Ga0500562_006512 3300053108 Bacteria 2942
356 Ga0500608_038666 3300053122 Bacteria 2283
357 Ga0500618_000013 3300053125 Bacteria 183026
358 Ga0500604_0002299 3300053151 Bacteria 5228
359 Ga0500616_0000015 3300053153 Bacteria 633259
360 Ga0500622_0000075 3300053156 Bacteria 109513
361 Ga0500622_0000086 3300053156 Bacteria 99366
362 Ga0500622_0001295 3300053156 Bacteria 20351
363 Ga0500622_0018105 3300053156 Bacteria 3746
364 Ga0500624_000823 3300053157 Bacteria 7113

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003322 rootL2_10006050 rootL2_100060503 325
2 3300003316 rootH1_10075048 rootH1_100750482 332
3 3300046660 Ga0495625_0054401 Ga0495625_0054401_285_1313 342
4 3300005262 Ga0065165_1000417 Ga0065165_100041710 344
5 3300003323 rootH1_10103210 rootH1_101032102 346
6 3300053153 Ga0500616_0000015 Ga0500616_0000015_398058_399197 347
7 3300025298 Ga0209050_1014538 Ga0209050_10145382 348
8 3300025298 Ga0209050_1001156 Ga0209050_100115613 352
9 3300005339 Ga0070660_100032627 Ga0070660_1000326273 356
10 3300005366 Ga0070659_100000100 Ga0070659_10000010035 356
11 3300025919 Ga0207657_10140810 Ga0207657_101408101 356
12 3300025932 Ga0207690_10000381 Ga0207690_1000038123 356
13 3300003323 rootH1_10212103 rootH1_102121032 358
14 3300006844 Ga0075428_100038854 Ga0075428_1000388542 358
15 3300031548 Ga0307408_100121656 Ga0307408_1001216562 358
16 3300032002 Ga0307416_100024283 Ga0307416_1000242832 358
17 3300032126 Ga0307415_100000558 Ga0307415_10000055817 358
18 3300049652 Ga0501202_007091 Ga0501202_007091_924_2000 358
19 3300049686 Ga0501257_010151 Ga0501257_010151_1036_2112 358
20 3300053156 Ga0500622_0001295 Ga0500622_0001295_8616_9692 358
21 3300049460 Ga0495682_0081845 Ga0495682_0081845_53_1132 359
22 3300025250 Ga0209026_1000526 Ga0209026_100052623 363
23 3300013102 Ga0157371_10016476 Ga0157371_100164762 366
24 3300013105 Ga0157369_10057868 Ga0157369_100578685 366
25 3300042876 Ga0451577_0000097 Ga0451577_0000097_157829_158968 368
26 3300028794 Ga0307515_10006107 Ga0307515_1000610710 369
27 3300031548 Ga0307408_100000357 Ga0307408_10000035738 370
28 3300031548 Ga0307408_100001180 Ga0307408_10000118016 370
29 3300031911 Ga0307412_10000415 Ga0307412_1000041516 370
30 iso_pu_bacteria 2839989709 2839992019 372
31 3300046460 Ga0495638_0000004 Ga0495638_0000004_428526_429665 374
32 3300014326 Ga0157380_10000002 Ga0157380_10000002192 375
33 iso_pu_bacteria 2585427687 2586209484 375
34 iso_pu_bacteria 2599185184 2599477281 375
35 iso_pu_bacteria 2738541283 2738756544 375
36 iso_pu_bacteria 2738541284 2738760876 375
37 iso_pu_bacteria 2738541302 2738853629 375
38 iso_pu_bacteria 2738543023 2739303983 375
39 iso_pu_bacteria 2739367651 2739588857 375
40 iso_pu_bacteria 2739367656 2739617967 375
41 iso_pu_bacteria 2739367663 2739645242 375
42 iso_pu_bacteria 2775506987 2776613061 375
43 iso_pu_bacteria 2818991437 2819548030 375
44 iso_pu_bacteria 2842722452 2842726310 375
45 iso_pu_bacteria 2842909656 2842910563 375
46 iso_pu_bacteria 2849281842 2849282184 375
47 iso_pu_bacteria 2852623160 2852624095 375
48 iso_pu_bacteria 2852627209 2852627314 375
49 iso_pu_bacteria 2857627736 2857628997 375
50 iso_pu_bacteria 2884933994 2884936984 375
51 iso_pu_bacteria 2895498888 2895502784 375
52 iso_pu_bacteria 2902048731 2902048854 375
53 iso_pu_bacteria 2904445276 2904445521 375
54 iso_pu_bacteria 2919186247 2919187349 375
55 iso_pu_bacteria 2919437846 2919442311 375
56 iso_pu_bacteria 2928078545 2928079198 375
57 iso_pu_bacteria 2928147474 2928148431 375
58 iso_pu_bacteria 2932082852 2932085727 375
59 iso_pu_bacteria 2939664404 2939665383 375
60 iso_pu_bacteria 2945997725 2946000879 375
61 iso_pu_bacteria 2954016120 2954017784 375
62 iso_pu_bacteria 2977232053 2977236710 375
63 3300044712 Ga0453684_0016570 Ga0453684_0016570_10039_11169 376
64 iso_pu_bacteria 2721755487 2722726535 376
65 iso_pu_bacteria 2842903701 2842906733 376
66 iso_pu_bacteria 2890737413 2890737524 376
67 iso_pu_bacteria 2896317667 2896319436 376
68 iso_pu_bacteria 2896344016 2896345706 376
69 iso_pu_bacteria 2898713307 2898713329 376
70 iso_pu_bacteria 2904780799 2904783604 376
71 iso_pu_bacteria 2919177583 2919182155 376
72 iso_pu_bacteria 3003233435 3003235200 376
73 iso_pu_bacteria 8055588893 8055591944 376
74 3300009094 Ga0111539_10026626 Ga0111539_100266264 378
75 3300027907 Ga0207428_10033182 Ga0207428_100331822 378
76 3300042876 Ga0451577_0021978 Ga0451577_0021978_1538_2674 378
77 3300045051 Ga0451576_0008086 Ga0451576_0008086_8105_9241 378
78 3300050511 nmdc:mga08y16_20139_c1 nmdc:mga08y16_20139_c1_1231_2367 378
79 3300001904 JGI24736J21556_1005660 JGI24736J21556_10056602 379
80 3300002067 JGI24735J21928_10000001 JGI24735J21928_10000001344 379
81 3300002067 JGI24735J21928_10027509 JGI24735J21928_100275091 379
82 3300002737 JGI25162J39368_1000427 JGI25162J39368_100042727 379
83 3300002772 JGI25164J39214_1001353 JGI25164J39214_10013534 379
84 3300002773 JGI25152J39213_1000894 JGI25152J39213_100089412 379
85 3300002774 JGI25150J39212_1000051 JGI25150J39212_100005111 379
86 3300003187 JGI25151J46595_10000205 JGI25151J46595_1000020554 379
87 3300003214 JGI25165J46597_1000548 JGI25165J46597_100054830 379
88 3300003215 JGI25153J46596_10000144 JGI25153J46596_1000014411 379
89 3300003316 rootH1_10001294 rootH1_1000129427 379
90 3300003316 rootH1_10024721 rootH1_1002472116 379
91 3300003316 rootH1_10044460 rootH1_100444604 379
92 3300003316 rootH1_10117365 rootH1_101173652 379
93 3300003320 rootH2_10006566 rootH2_1000656632 379
94 3300003320 rootH2_10012128 rootH2_100121289 379
95 3300003320 rootH2_10056267 rootH2_100562672 379
96 3300003320 rootH2_10278939 rootH2_102789392 379
97 3300003322 rootL2_10115235 rootL2_1011523516 379
98 3300003322 rootL2_10195977 rootL2_101959775 379
99 3300003323 rootH1_10003667 rootH1_1000366773 379
100 3300003323 rootH1_10020954 rootH1_100209543 379
101 3300003323 rootH1_10025005 rootH1_100250054 379
102 3300003323 rootH1_10029634 rootH1_1002963411 379
103 3300003323 rootH1_10100821 rootH1_101008211 379
104 3300003323 rootH1_10112363 rootH1_101123631 379
105 3300003323 rootH1_10113739 rootH1_101137393 379
106 3300003323 rootH1_10129216 rootH1_101292163 379
107 3300003323 rootH1_10155243 rootH1_101552433 379
108 3300003323 rootH1_10174015 rootH1_101740152 379
109 3300003781 Ga0055536_1000030 Ga0055536_100003022 379
110 3300003791 Ga0055530_10000723 Ga0055530_1000072311 379
111 3300003794 Ga0055531_10000339 Ga0055531_1000033943 379
112 3300005288 Ga0065714_10002361 Ga0065714_1000236132 379
113 3300005288 Ga0065714_10003305 Ga0065714_100033056 379
114 3300005288 Ga0065714_10004634 Ga0065714_100046342 379
115 3300005288 Ga0065714_10005722 Ga0065714_100057226 379
116 3300005288 Ga0065714_10064513 Ga0065714_100645136 379
117 3300005288 Ga0065714_10067901 Ga0065714_100679011 379
118 3300005289 Ga0065704_10071977 Ga0065704_100719777 379
119 3300005293 Ga0065715_10089705 Ga0065715_100897056 379
120 3300005327 Ga0070658_10000045 Ga0070658_10000045104 379
121 3300005327 Ga0070658_10011815 Ga0070658_100118156 379
122 3300005328 Ga0070676_10000502 Ga0070676_1000050214 379
123 3300005336 Ga0070680_100039423 Ga0070680_1000394233 379
124 3300005338 Ga0068868_100007520 Ga0068868_1000075206 379
125 3300005355 Ga0070671_100015008 Ga0070671_1000150086 379
126 3300005364 Ga0070673_100205743 Ga0070673_1002057432 379
127 3300005366 Ga0070659_100007893 Ga0070659_1000078938 379
128 3300005457 Ga0070662_100000103 Ga0070662_10000010330 379
129 3300005457 Ga0070662_100285626 Ga0070662_1002856261 379
130 3300005458 Ga0070681_10005489 Ga0070681_100054897 379
131 3300005459 Ga0068867_100002497 Ga0068867_1000024973 379
132 3300005530 Ga0070679_100002090 Ga0070679_10000209013 379
133 3300005530 Ga0070679_100096499 Ga0070679_1000964993 379
134 3300005535 Ga0070684_100048155 Ga0070684_1000481553 379
135 3300005539 Ga0068853_100013613 Ga0068853_1000136133 379
136 3300005548 Ga0070665_100000083 Ga0070665_10000008370 379
137 3300005563 Ga0068855_100000122 Ga0068855_1000001225 379
138 3300005563 Ga0068855_100003118 Ga0068855_10000311817 379
139 3300005563 Ga0068855_100026390 Ga0068855_1000263906 379
140 3300005563 Ga0068855_100092416 Ga0068855_1000924163 379
141 3300005578 Ga0068854_100103992 Ga0068854_1001039922 379
142 3300005614 Ga0068856_100011720 Ga0068856_1000117209 379
143 3300005614 Ga0068856_100013242 Ga0068856_1000132422 379
144 3300005614 Ga0068856_100030304 Ga0068856_1000303042 379
145 3300005614 Ga0068856_100118536 Ga0068856_1001185362 379
146 3300005614 Ga0068856_100360567 Ga0068856_1003605671 379
147 3300005616 Ga0068852_100004713 Ga0068852_10000471315 379
148 3300005616 Ga0068852_100150443 Ga0068852_1001504433 379
149 3300005841 Ga0068863_100047616 Ga0068863_1000476163 379
150 3300006195 Ga0075366_10002823 Ga0075366_100028235 379
151 3300006195 Ga0075366_10018005 Ga0075366_100180056 379
152 3300006195 Ga0075366_10037615 Ga0075366_100376152 379
153 3300006195 Ga0075366_10047906 Ga0075366_100479062 379
154 3300006237 Ga0097621_100000041 Ga0097621_10000004163 379
155 3300006358 Ga0068871_100003606 Ga0068871_10000360613 379
156 3300006881 Ga0068865_100001976 Ga0068865_1000019765 379
157 3300009093 Ga0105240_10000010 Ga0105240_10000010350 379
158 3300009093 Ga0105240_10012588 Ga0105240_1001258812 379
159 3300009093 Ga0105240_10014628 Ga0105240_1001462810 379
160 3300009093 Ga0105240_10105415 Ga0105240_101054152 379
161 3300009093 Ga0105240_10118561 Ga0105240_101185613 379
162 3300009093 Ga0105240_10169618 Ga0105240_101696183 379
163 3300009093 Ga0105240_10308029 Ga0105240_103080293 379
164 3300009094 Ga0111539_10001883 Ga0111539_100018832 379
165 3300009174 Ga0105241_10000775 Ga0105241_1000077519 379
166 3300009174 Ga0105241_10002686 Ga0105241_1000268612 379
167 3300009174 Ga0105241_10002915 Ga0105241_1000291514 379
168 3300009176 Ga0105242_10013698 Ga0105242_100136985 379
169 3300009176 Ga0105242_10443348 Ga0105242_104433481 379
170 3300009545 Ga0105237_10000227 Ga0105237_100002276 379
171 3300009545 Ga0105237_10002528 Ga0105237_1000252817 379
172 3300009545 Ga0105237_10021405 Ga0105237_100214056 379
173 3300009545 Ga0105237_10042234 Ga0105237_100422346 379
174 3300009545 Ga0105237_10164920 Ga0105237_101649203 379
175 3300009545 Ga0105237_10189798 Ga0105237_101897981 379
176 3300009545 Ga0105237_10193209 Ga0105237_101932091 379
177 3300009551 Ga0105238_10037862 Ga0105238_100378624 379
178 3300009553 Ga0105249_10181011 Ga0105249_101810112 379
179 3300010375 Ga0105239_10000002 Ga0105239_1000000265 379
180 3300010375 Ga0105239_10000006 Ga0105239_1000000650 379
181 3300010375 Ga0105239_10000578 Ga0105239_100005785 379
182 3300010375 Ga0105239_10002369 Ga0105239_1000236933 379
183 3300010375 Ga0105239_10003720 Ga0105239_1000372014 379
184 3300010375 Ga0105239_10012355 Ga0105239_100123556 379
185 3300010375 Ga0105239_10100770 Ga0105239_101007703 379
186 3300010375 Ga0105239_10329146 Ga0105239_103291461 379
187 3300013100 Ga0157373_10000265 Ga0157373_1000026531 379
188 3300013100 Ga0157373_10003717 Ga0157373_1000371711 379
189 3300013100 Ga0157373_10012120 Ga0157373_100121205 379
190 3300013102 Ga0157371_10000034 Ga0157371_1000003493 379
191 3300013102 Ga0157371_10000869 Ga0157371_1000086937 379
192 3300013102 Ga0157371_10002042 Ga0157371_1000204218 379
193 3300013104 Ga0157370_10006991 Ga0157370_100069917 379
194 3300013104 Ga0157370_10007182 Ga0157370_100071827 379
195 3300013104 Ga0157370_10022321 Ga0157370_100223212 379
196 3300013104 Ga0157370_10110159 Ga0157370_101101594 379
197 3300013105 Ga0157369_10000002 Ga0157369_10000002188 379
198 3300013105 Ga0157369_10029666 Ga0157369_100296664 379
199 3300013105 Ga0157369_10236973 Ga0157369_102369732 379
200 3300013296 Ga0157374_10000129 Ga0157374_1000012951 379
201 3300013296 Ga0157374_10003215 Ga0157374_1000321514 379
202 3300013296 Ga0157374_10044625 Ga0157374_100446252 379
203 3300013296 Ga0157374_10354031 Ga0157374_103540311 379
204 3300013297 Ga0157378_10020455 Ga0157378_100204554 379
205 3300013306 Ga0163162_10000068 Ga0163162_1000006870 379
206 3300013306 Ga0163162_10000330 Ga0163162_1000033036 379
207 3300013307 Ga0157372_10000016 Ga0157372_10000016168 379
208 3300013307 Ga0157372_10001333 Ga0157372_100013333 379
209 3300013307 Ga0157372_10008429 Ga0157372_1000842912 379
210 3300013307 Ga0157372_10184885 Ga0157372_101848852 379
211 3300013307 Ga0157372_10435164 Ga0157372_104351642 379
212 3300013308 Ga0157375_10015866 Ga0157375_100158666 379
213 3300014497 Ga0182008_10000010 Ga0182008_10000010183 379
214 3300014497 Ga0182008_10000726 Ga0182008_1000072611 379
215 3300014497 Ga0182008_10001151 Ga0182008_1000115114 379
216 3300014497 Ga0182008_10011814 Ga0182008_100118145 379
217 3300015261 Ga0182006_1000505 Ga0182006_10005055 379
218 3300015261 Ga0182006_1002042 Ga0182006_10020426 379
219 3300015261 Ga0182006_1002694 Ga0182006_10026943 379
220 3300015262 Ga0182007_10000001 Ga0182007_10000001585 379
221 3300015262 Ga0182007_10007336 Ga0182007_100073365 379
222 3300015682 Ga0183373_1003 Ga0183373_100318 379
223 3300017792 Ga0163161_10001536 Ga0163161_100015363 379
224 3300017792 Ga0163161_10008145 Ga0163161_100081452 379
225 3300025231 Ga0207427_100090 Ga0207427_10009084 379
226 3300025233 Ga0209437_100034 Ga0209437_100034293 379
227 3300025233 Ga0209437_100070 Ga0209437_10007039 379
228 3300025245 Ga0207425_1000007 Ga0207425_1000007604 379
229 3300025250 Ga0209026_1002750 Ga0209026_10027507 379
230 3300025258 Ga0209129_1000006 Ga0209129_1000006604 379
231 3300025258 Ga0209129_1005705 Ga0209129_10057053 379
232 3300025261 Ga0209233_1000038 Ga0209233_1000038293 379
233 3300025261 Ga0209233_1011651 Ga0209233_10116512 379
234 3300025272 Ga0209455_1001458 Ga0209455_10014585 379
235 3300025292 Ga0209676_1000001 Ga0209676_10000011070 379
236 3300025294 Ga0209025_1000025 Ga0209025_1000025434 379
237 3300025297 Ga0209758_1000016 Ga0209758_1000016604 379
238 3300025298 Ga0209050_1000018 Ga0209050_1000018513 379
239 3300025304 Ga0209257_1000007 Ga0209257_1000007943 379
240 3300025904 Ga0207647_10000062 Ga0207647_1000006227 379
241 3300025904 Ga0207647_10000263 Ga0207647_1000026317 379
242 3300025904 Ga0207647_10045170 Ga0207647_100451704 379
243 3300025907 Ga0207645_10000224 Ga0207645_1000022415 379
244 3300025909 Ga0207705_10000080 Ga0207705_1000008022 379
245 3300025911 Ga0207654_10002041 Ga0207654_1000204114 379
246 3300025911 Ga0207654_10006843 Ga0207654_100068436 379
247 3300025911 Ga0207654_10015451 Ga0207654_100154513 379
248 3300025911 Ga0207654_10098536 Ga0207654_100985361 379
249 3300025912 Ga0207707_10004744 Ga0207707_100047445 379
250 3300025913 Ga0207695_10000019 Ga0207695_10000019106 379
251 3300025913 Ga0207695_10007270 Ga0207695_100072706 379
252 3300025913 Ga0207695_10017772 Ga0207695_100177728 379
253 3300025913 Ga0207695_10019865 Ga0207695_100198659 379
254 3300025914 Ga0207671_10000515 Ga0207671_1000051555 379
255 3300025914 Ga0207671_10018071 Ga0207671_100180713 379
256 3300025914 Ga0207671_10097453 Ga0207671_100974531 379
257 3300025914 Ga0207671_10104195 Ga0207671_101041953 379
258 3300025914 Ga0207671_10116841 Ga0207671_101168412 379
259 3300025917 Ga0207660_10015516 Ga0207660_100155165 379
260 3300025919 Ga0207657_10028553 Ga0207657_100285535 379
261 3300025919 Ga0207657_10057018 Ga0207657_100570181 379
262 3300025919 Ga0207657_10289249 Ga0207657_102892491 379
263 3300025932 Ga0207690_10045776 Ga0207690_100457762 379
264 3300025933 Ga0207706_10000851 Ga0207706_100008518 379
265 3300025938 Ga0207704_10000037 Ga0207704_1000003758 379
266 3300025949 Ga0207667_10000020 Ga0207667_10000020313 379
267 3300025949 Ga0207667_10004885 Ga0207667_1000488511 379
268 3300025949 Ga0207667_10092191 Ga0207667_100921912 379
269 3300025960 Ga0207651_10025431 Ga0207651_100254315 379
270 3300025961 Ga0207712_10150646 Ga0207712_101506462 379
271 3300025981 Ga0207640_10102795 Ga0207640_101027952 379
272 3300026023 Ga0207677_10003306 Ga0207677_100033064 379
273 3300026023 Ga0207677_10050958 Ga0207677_100509583 379
274 3300026035 Ga0207703_10062555 Ga0207703_100625553 379
275 3300026041 Ga0207639_10011268 Ga0207639_100112683 379
276 3300026078 Ga0207702_10000273 Ga0207702_1000027322 379
277 3300026078 Ga0207702_10021553 Ga0207702_100215532 379
278 3300026078 Ga0207702_10022857 Ga0207702_100228576 379
279 3300026078 Ga0207702_10226178 Ga0207702_102261782 379
280 3300026089 Ga0207648_10000241 Ga0207648_1000024158 379
281 3300026116 Ga0207674_10212054 Ga0207674_102120542 379
282 3300026121 Ga0207683_10006368 Ga0207683_1000636811 379
283 3300026142 Ga0207698_10004698 Ga0207698_100046985 379
284 3300026142 Ga0207698_10095727 Ga0207698_100957273 379
285 3300028379 Ga0268266_10000095 Ga0268266_1000009574 379
286 3300028786 Ga0307517_10000719 Ga0307517_100007196 379
287 3300028794 Ga0307515_10000012 Ga0307515_1000001227 379
288 3300028794 Ga0307515_10004038 Ga0307515_1000403823 379
289 3300028794 Ga0307515_10011558 Ga0307515_100115586 379
290 3300028794 Ga0307515_10116495 Ga0307515_101164952 379
291 3300031456 Ga0307513_10075135 Ga0307513_100751353 379
292 3300031507 Ga0307509_10016710 Ga0307509_100167102 379
293 3300031507 Ga0307509_10027500 Ga0307509_100275004 379
294 3300031507 Ga0307509_10037505 Ga0307509_100375054 379
295 3300031548 Ga0307408_100002516 Ga0307408_1000025162 379
296 3300031731 Ga0307405_10000026 Ga0307405_1000002671 379
297 3300031731 Ga0307405_10024675 Ga0307405_100246753 379
298 3300031824 Ga0307413_10108226 Ga0307413_101082262 379
299 3300031852 Ga0307410_10147399 Ga0307410_101473992 379
300 3300031903 Ga0307407_10000032 Ga0307407_1000003254 379
301 3300031911 Ga0307412_10000018 Ga0307412_10000018205 379
302 3300032002 Ga0307416_100000045 Ga0307416_10000004579 379
303 3300032004 Ga0307414_10008062 Ga0307414_100080623 379
304 3300032004 Ga0307414_10008445 Ga0307414_100084452 379
305 3300032004 Ga0307414_10009300 Ga0307414_100093005 379
306 3300032004 Ga0307414_10101161 Ga0307414_101011612 379
307 3300032004 Ga0307414_10234916 Ga0307414_102349161 379
308 3300032005 Ga0307411_10015562 Ga0307411_100155622 379
309 3300032005 Ga0307411_10256108 Ga0307411_102561081 379
310 3300033179 Ga0307507_10001815 Ga0307507_1000181546 379
311 3300033180 Ga0307510_10053157 Ga0307510_100531572 379
312 3300035695 Ga0373927_0010368 Ga0373927_0010368_1615_2754 379
313 3300037312 Ga0395899_0000002 Ga0395899_0000002_765044_766183 379
314 3300037312 Ga0395899_0000283 Ga0395899_0000283_29280_30419 379
315 3300037312 Ga0395899_0001182 Ga0395899_0001182_1735_2874 379
316 3300037312 Ga0395899_0020716 Ga0395899_0020716_3092_4231 379
317 3300037418 Ga0395900_0000694 Ga0395900_0000694_17528_18667 379
318 3300037418 Ga0395900_0001938 Ga0395900_0001938_11513_12652 379
319 3300037418 Ga0395900_0091462 Ga0395900_0091462_1234_2373 379
320 3300037466 Ga0395898_0022585 Ga0395898_0022585_4422_5561 379
321 3300037471 Ga0395905_0000841 Ga0395905_0000841_24305_25444 379
322 3300037471 Ga0395905_0006027 Ga0395905_0006027_9647_10786 379
323 3300038443 Ga0395901_0006601 Ga0395901_0006601_3795_4934 379
324 3300038443 Ga0395901_0094245 Ga0395901_0094245_25_1164 379
325 3300039447 Ga0436361_0112067 Ga0436361_0112067_192_1331 379
326 3300042005 Ga0439448_0006684 Ga0439448_0006684_271_1410 379
327 3300044656 Ga0466969_0015787 Ga0466969_0015787_946_2085 379
328 3300044712 Ga0453684_0007524 Ga0453684_0007524_13574_14713 379
329 3300045051 Ga0451576_0005547 Ga0451576_0005547_9147_10286 379
330 3300046471 Ga0495650_0000014 Ga0495650_0000014_20632_21771 379
331 3300046492 Ga0495585_0001159 Ga0495585_0001159_19235_20374 379
332 3300046507 Ga0495606_0000241 Ga0495606_0000241_60774_61913 379
333 3300046512 Ga0495610_0000472 Ga0495610_0000472_21783_22922 379
334 3300046512 Ga0495610_0056680 Ga0495610_0056680_59_1198 379
335 3300046513 Ga0495616_0001895 Ga0495616_0001895_10118_11257 379
336 3300046523 Ga0495644_0040281 Ga0495644_0040281_478_1617 379
337 3300046529 Ga0495652_0059748 Ga0495652_0059748_1860_2999 379
338 3300046529 Ga0495652_0175510 Ga0495652_0175510_449_1588 379
339 3300046538 Ga0495609_0001800 Ga0495609_0001800_77_1216 379
340 3300046538 Ga0495609_0015002 Ga0495609_0015002_2148_3287 379
341 3300046558 Ga0495633_0000027 Ga0495633_0000027_165649_166788 379
342 3300046616 Ga0495668_0002237 Ga0495668_0002237_9883_11022 379
343 3300046660 Ga0495625_0000003 Ga0495625_0000003_215032_216171 379
344 3300046660 Ga0495625_0000381 Ga0495625_0000381_42263_43402 379
345 3300046660 Ga0495625_0001238 Ga0495625_0001238_3676_4815 379
346 3300046660 Ga0495625_0025624 Ga0495625_0025624_18_1157 379
347 3300046660 Ga0495625_0071409 Ga0495625_0071409_18_1157 379
348 3300046665 Ga0495661_0003579 Ga0495661_0003579_5542_6681 379
349 3300046665 Ga0495661_0014257 Ga0495661_0014257_2599_3738 379
350 3300046684 Ga0495669_0035749 Ga0495669_0035749_637_1776 379
351 3300046694 Ga0495649_0000002 Ga0495649_0000002_790822_791961 379
352 3300046810 Ga0495660_0067240 Ga0495660_0067240_688_1827 379
353 3300047443 Ga0495687_000785 Ga0495687_000785_31374_32513 379
354 3300047472 Ga0495686_0002723 Ga0495686_0002723_9639_10778 379
355 3300047472 Ga0495686_0004577 Ga0495686_0004577_8692_9831 379
356 3300047472 Ga0495686_0138368 Ga0495686_0138368_162_1301 379
357 3300048925 Ga0496122_0000789 Ga0496122_0000789_57316_58455 379
358 3300048926 Ga0496123_0002415 Ga0496123_0002415_5073_6212 379
359 3300049523 Ga0501300_001906 Ga0501300_001906_458_1597 379
360 3300049670 Ga0501236_000105 Ga0501236_000105_4580_5719 379
361 3300049677 Ga0501247_001148 Ga0501247_001148_99_1238 379
362 3300049686 Ga0501257_010471 Ga0501257_010471_524_1663 379
363 3300049761 Ga0501264_000155 Ga0501264_000155_8748_9887 379
364 3300050493 nmdc:mga0k408_11241_c1 nmdc:mga0k408_11241_c1_466_1605 379
365 3300050493 nmdc:mga0k408_1219_c1 nmdc:mga0k408_1219_c1_2406_3545 379
366 3300050493 nmdc:mga0k408_2497_c1 nmdc:mga0k408_2497_c1_229_1368 379
367 3300050493 nmdc:mga0k408_40564_c1 nmdc:mga0k408_40564_c1_1337_2476 379
368 3300053080 Ga0500635_0000332 Ga0500635_0000332_9054_10193 379
369 3300053080 Ga0500635_0002836 Ga0500635_0002836_1168_2307 379
370 3300053093 Ga0500651_0001157 Ga0500651_0001157_4826_5965 379
371 3300053108 Ga0500562_006512 Ga0500562_006512_1761_2903 379
372 3300053122 Ga0500608_038666 Ga0500608_038666_379_1518 379
373 3300053125 Ga0500618_000013 Ga0500618_000013_92847_93986 379
374 3300053151 Ga0500604_0002299 Ga0500604_0002299_1530_2672 379
375 3300053156 Ga0500622_0000075 Ga0500622_0000075_40746_41888 379
376 3300053156 Ga0500622_0000086 Ga0500622_0000086_1552_2694 379
377 3300053156 Ga0500622_0018105 Ga0500622_0018105_2549_3688 379
378 3300053157 Ga0500624_000823 Ga0500624_000823_3722_4861 379
379 2162886007 SwRhRL2b_contig_3071305 SwRhRL2b_0381.00006460 380
380 3300005289 Ga0065704_10079977 Ga0065704_100799774 380
381 3300009093 Ga0105240_10082162 Ga0105240_100821625 380
382 3300009148 Ga0105243_10000018 Ga0105243_10000018128 380
383 3300013100 Ga0157373_10000240 Ga0157373_1000024020 380
384 3300013100 Ga0157373_10043392 Ga0157373_100433924 380
385 3300013102 Ga0157371_10000141 Ga0157371_1000014128 380
386 3300013307 Ga0157372_10000061 Ga0157372_10000061116 380
387 3300015261 Ga0182006_1010771 Ga0182006_10107715 380
388 3300025250 Ga0209026_1006847 Ga0209026_10068473 380
389 3300025913 Ga0207695_10118111 Ga0207695_101181113 380
390 3300025935 Ga0207709_10000021 Ga0207709_1000002168 380
391 3300030732 Ga0316176_1055852 Ga0316176_10558525 380
392 3300030742 Ga0316183_1209124 Ga0316183_120912414 380
393 3300030744 Ga0316181_1051627 Ga0316181_10516277 380
394 3300032004 Ga0307414_10403269 Ga0307414_104032691 380
395 3300037418 Ga0395900_0042117 Ga0395900_0042117_1676_2818 380
396 3300045051 Ga0451576_0043940 Ga0451576_0043940_1704_2870 380
397 3300045836 Ga0466958_0017675 Ga0466958_0017675_683_1924 380
398 3300048919 Ga0496116_0002707 Ga0496116_0002707_16480_17622 380
399 3300048920 Ga0496117_0001260 Ga0496117_0001260_16026_17168 380
400 3300048921 Ga0496118_0040640 Ga0496118_0040640_1642_2784 380
401 3300048925 Ga0496122_0007970 Ga0496122_0007970_9004_10146 380
402 3300048926 Ga0496123_0058872 Ga0496123_0058872_528_1670 380
403 3300049663 Ga0501223_000815 Ga0501223_000815_167_1318 380

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22660

RS_preATP-grasp-like

Ribonucleotide synthetase preATP-grasp domain

41

138

0.99

PF17769

PurK_C

Phosphoribosylaminoimidazole carboxylase C-terminal domain

340

401

0.97

PF02222

ATP-grasp

ATP-grasp domain

147

314

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ax6-assembly1.cif.gz_B crystal structure of n5-carboxyaminoimidazole ribonucleotide synthetase from thermotoga maritima 0.9627 9 380
3ax6-assembly1.cif.gz_B crystal structure of n5-carboxyaminoimidazole ribonucleotide synthetase from thermotoga maritima 0.9549 9 380
3ax6-assembly2.cif.gz_D crystal structure of n5-carboxyaminoimidazole ribonucleotide synthetase from thermotoga maritima 0.9527 9 380
3ax6-assembly2.cif.gz_C crystal structure of n5-carboxyaminoimidazole ribonucleotide synthetase from thermotoga maritima 0.9511 9 380
3ax6-assembly2.cif.gz_D crystal structure of n5-carboxyaminoimidazole ribonucleotide synthetase from thermotoga maritima 0.945 9 380
ID Description Score Start End Superfamily
3ax6C03 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9652 180 375 3.30.470.20
3ax6C03 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.96 180 375 3.30.470.20
2czgB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9484 8 115 3.40.50.20
3aw8B03 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.948 180 375 3.30.470.20
af_A0A1D6M0Q5_75_186_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9292 4 115 3.40.50.20
ID Description Score Start End GO Terms
AF-A0A7Y6ZII1-F1-model_v4 5-(Carboxyamino)imidazole ribonucleotide synthase 0.9886 304 380 GO:0005829
AF-A0A3D3PBW4-F1-model_v4 5-(Carboxyamino)imidazole ribonucleotide synthase 0.9873 48 273 GO:0003824
GO:0005524
GO:0005829
GO:0006164
GO:0046872
AF-E4RS76-F1-model_v4 N5-carboxyaminoimidazole ribonucleotide synthase (N5-CAIR synthase) (EC 6.3.4.18) (5-(carboxyamino)imidazole ribonucleotide synthetase) 0.984 9 380 GO:0004638
GO:0005524
GO:0005829
GO:0006189
GO:0034028
GO:0046872
AF-A0A7X9KNS6-F1-model_v4 ATP-grasp domain-containing protein 0.9826 9 260 GO:0003824
GO:0005524
AF-A0A553FNH2-F1-model_v4 N5-carboxyaminoimidazole ribonucleotide synthase (N5-CAIR synthase) (EC 6.3.4.18) (5-(carboxyamino)imidazole ribonucleotide synthetase) 0.9805 1 380 GO:0004638
GO:0005524
GO:0005829
GO:0006189
GO:0034028
GO:0046872

Feature Viewer

pLDDT pTM Quality
93.54 0.92 High
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Predicted Structure (AlphaFold2)

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