F429940

General Info

Members Datasets Scaffolds Average Seq Length
384 186 768 425

Family's Representative Sequence

Representative Sequence 3300035119|Ga0373956_0019811|Ga0373956_0019811_94_1527
Length 477
Sequence MQGDGVLTMLKLIGAQPKNDLSQIHSLFRFSKSITKGFQMTSNYQRASLAGALILSGLSCGLQSADAAVNAAVNPQVIDDSSLHAKSTTLGGATVLPTTRTVAHWWGSTPNPSNGITYGYNMVGASPYTCSGLDCSVTIEVDITPIVVNVAGLTFSGSDVLAATLASPEFSTEDFGSTPFATAGAPNLPRGVGGILSQNDAGNHLQLQDATMRAQFNQTGGSGYHLILHPHVLPAVTINVPQNQGTLLQSGRGVIFADVDIGWWSSQIQNLTNTADATHLAVYLTNNVLLFEGKSVLNCCVIGYHGTRATGNGGGSTNSNGNAVVQTFAWASWVQPGIYARPNGGTDWALQDIHALSHEIAEWADDPFVNNTVQPWLTPTAPQYGCTGVLETGDPVVGIGFAIGTNTFQQGPNPNGTQSADGYYHPEDEALLPWFMRVAPNNISEPTQTSSTNVGRYTLMGDLNPFAGFRQPATGCQ

Samples

Sample ID Description Type Environment
1 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
61 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
88 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
89 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
90 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
91 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
92 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
101 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
102 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
110 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
120 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
121 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
122 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
123 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
124 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
125 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
126 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
127 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
128 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
129 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
130 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
131 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
132 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
133 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
134 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
135 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
136 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
137 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
138 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
139 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
140 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
141 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
142 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
143 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
144 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
145 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
146 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
147 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
148 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
149 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
150 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
151 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
152 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
155 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
156 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
157 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
158 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
159 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
160 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
161 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
164 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
165 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
166 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
167 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
168 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
169 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
170 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
171 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
172 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
175 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
176 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
177 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
178 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
179 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
180 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
181 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
182 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
183 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
184 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
185 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
186 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.05
Metatranscriptomes 3.65
Isolates 1.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.81
Rhizosphere 90.89
Stem 0
Stem Tuber 0
Unclassified 11.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373956_0019811 3300035119 Unclassified 2856
2 LJNas_1000154 3300000546 Bacteria 11091
3 LJNas_1001282 3300000546 Unclassified 3731
4 rootL2_10200242 3300003322 Bacteria 1792
5 Ga0058859_10589926 3300004798 Bacteria 1732
6 Ga0070683_100005806 3300005329 Bacteria 10321
7 Ga0070680_100081100 3300005336 Bacteria 2677
8 Ga0070680_100278182 3300005336 Bacteria 1418
9 Ga0070660_100096050 3300005339 Bacteria 2343
10 Ga0070689_100199500 3300005340 Unclassified 1633
11 Ga0070691_10006008 3300005341 Bacteria 5541
12 Ga0070661_100026472 3300005344 Bacteria 4172
13 Ga0070667_100033966 3300005367 Bacteria 4266
14 Ga0070709_10127820 3300005434 Bacteria 1731
15 Ga0070714_100010549 3300005435 Bacteria 7309
16 Ga0070714_100052943 3300005435 Bacteria 3463
17 Ga0070713_100000769 3300005436 Bacteria 20534
18 Ga0070713_100056780 3300005436 Unclassified 3257
19 Ga0070708_100000027 3300005445 Bacteria 97468
20 Ga0070681_10004326 3300005458 Bacteria 13499
21 Ga0070681_10040150 3300005458 Unclassified 4691
22 Ga0070681_10095201 3300005458 Bacteria 2926
23 Ga0070706_100000117 3300005467 Bacteria 97475
24 Ga0070706_100009275 3300005467 Bacteria 9169
25 Ga0070706_100041589 3300005467 Bacteria 4243
26 Ga0070706_100122250 3300005467 Bacteria 2427
27 Ga0070707_100000060 3300005468 Bacteria 97475
28 Ga0070707_100001659 3300005468 Bacteria 21551
29 Ga0070707_100012869 3300005468 Bacteria 7814
30 Ga0070707_100028045 3300005468 Bacteria 5357
31 Ga0070707_100133983 3300005468 Unclassified 2410
32 Ga0070707_100300387 3300005468 Unclassified 1560
33 Ga0070698_100041971 3300005471 Bacteria 4694
34 Ga0070698_100045483 3300005471 Bacteria 4493
35 Ga0070698_100231516 3300005471 Bacteria 1781
36 Ga0070698_100253575 3300005471 Unclassified 1692
37 Ga0070699_100000232 3300005518 Bacteria 54289
38 Ga0070699_100001466 3300005518 Bacteria 21605
39 Ga0070699_100021872 3300005518 Bacteria 5512
40 Ga0070699_100025040 3300005518 Bacteria 5145
41 Ga0070699_100030898 3300005518 Bacteria 4624
42 Ga0070679_100004179 3300005530 Bacteria 13314
43 Ga0070679_100079333 3300005530 Bacteria 3272
44 Ga0070684_100001432 3300005535 Bacteria 17196
45 Ga0070684_100110829 3300005535 Bacteria 2461
46 Ga0070697_100000029 3300005536 Bacteria 114092
47 Ga0070697_100022917 3300005536 Bacteria 4965
48 Ga0070697_100042953 3300005536 Unclassified 3659
49 Ga0070672_100032626 3300005543 Bacteria 3933
50 Ga0070695_100027577 3300005545 Bacteria 3519
51 Ga0070695_100105473 3300005545 Bacteria 1905
52 Ga0070696_100048451 3300005546 Unclassified 2950
53 Ga0070704_100024178 3300005549 Bacteria 3983
54 Ga0068855_100060471 3300005563 Bacteria 4430
55 Ga0070664_100014555 3300005564 Bacteria 6418
56 Ga0070664_100092952 3300005564 Unclassified 2613
57 Ga0068857_100000294 3300005577 Bacteria 34550
58 Ga0068857_100008800 3300005577 Bacteria 8744
59 Ga0068856_100000378 3300005614 Bacteria 48711
60 Ga0068856_100206097 3300005614 Bacteria 1981
61 Ga0068856_100277732 3300005614 Bacteria 1692
62 Ga0068852_100105519 3300005616 Unclassified 2553
63 Ga0068859_100171303 3300005617 Unclassified 2252
64 Ga0068864_100153305 3300005618 Unclassified 2089
65 Ga0068864_100304388 3300005618 Bacteria 1493
66 Ga0068858_100114952 3300005842 Unclassified 2514
67 Ga0068858_100126110 3300005842 Bacteria 2397
68 Ga0070717_10002102 3300006028 Bacteria 13966
69 Ga0070717_10028778 3300006028 Unclassified 4451
70 Ga0070712_100003895 3300006175 Bacteria 9186
71 Ga0070712_100098809 3300006175 Bacteria 2153
72 Ga0097621_100107202 3300006237 Bacteria 2357
73 Ga0097621_100240258 3300006237 Bacteria 1583
74 Ga0075436_100000825 3300006914 Bacteria 20635
75 Ga0075436_100001260 3300006914 Bacteria 17182
76 Ga0075436_100066514 3300006914 Bacteria 2491
77 Ga0097620_100171302 3300006931 Unclassified 2252
78 Ga0099795_10030336 3300007788 Unclassified 1855
79 Ga0105240_10019483 3300009093 Bacteria 9063
80 Ga0105240_10197513 3300009093 Bacteria 2360
81 Ga0111539_10518741 3300009094 Bacteria 1388
82 Ga0105245_10058320 3300009098 Bacteria 3475
83 Ga0105242_10154706 3300009176 Bacteria 2002
84 Ga0105242_10210347 3300009176 Bacteria 1733
85 Ga0105248_10008489 3300009177 Bacteria 11276
86 Ga0105248_10019922 3300009177 Bacteria 7425
87 Ga0105248_10031216 3300009177 Bacteria 5955
88 Ga0105248_10086904 3300009177 Unclassified 3519
89 Ga0105248_10119236 3300009177 Bacteria 2976
90 Ga0105237_10154405 3300009545 Bacteria 2292
91 Ga0099796_10022717 3300010159 Unclassified 1949
92 Ga0105246_10023589 3300011119 Bacteria 3983
93 Ga0157370_10304252 3300013104 Bacteria 1471
94 Ga0157369_10019574 3300013105 Bacteria 7575
95 Ga0157369_10083148 3300013105 Bacteria 3424
96 Ga0157378_10013514 3300013297 Bacteria 7140
97 Ga0163162_10277440 3300013306 Unclassified 1808
98 Ga0157375_10073210 3300013308 Bacteria 3445
99 Ga0163163_10066037 3300014325 Bacteria 3592
100 Ga0163163_10198246 3300014325 Unclassified 2056
101 Ga0157380_10046982 3300014326 Unclassified 3393
102 Ga0157379_10057521 3300014968 Bacteria 3475
103 Ga0197907_10273545 3300020069 Bacteria 1420
104 Ga0197907_10944824 3300020069 Unclassified 1383
105 Ga0206356_10104720 3300020070 Bacteria 1607
106 Ga0206356_10896465 3300020070 Bacteria 1499
107 Ga0206355_1366275 3300020076 Unclassified 1398
108 Ga0206351_10055424 3300020077 Unclassified 1403
109 Ga0206352_11199873 3300020078 Bacteria 1515
110 Ga0206350_10617437 3300020080 Bacteria 1419
111 Ga0206350_10673208 3300020080 Bacteria 1594
112 Ga0206354_10452058 3300020081 Unclassified 1397
113 Ga0206353_10001560 3300020082 Bacteria 3026
114 Ga0206353_10003984 3300020082 Unclassified 1397
115 Ga0207692_10035675 3300025898 Bacteria 2418
116 Ga0207647_10090877 3300025904 Bacteria 1821
117 Ga0207705_10217256 3300025909 Bacteria 1451
118 Ga0207684_10000148 3300025910 Bacteria 124604
119 Ga0207684_10010749 3300025910 Bacteria 8036
120 Ga0207684_10055580 3300025910 Bacteria 3358
121 Ga0207693_10002756 3300025915 Bacteria 15213
122 Ga0207660_10064483 3300025917 Bacteria 2644
123 Ga0207646_10000079 3300025922 Bacteria 129281
124 Ga0207646_10000143 3300025922 Bacteria 97493
125 Ga0207646_10003158 3300025922 Bacteria 18872
126 Ga0207646_10006268 3300025922 Bacteria 12335
127 Ga0207646_10016873 3300025922 Bacteria 6847
128 Ga0207646_10024273 3300025922 Bacteria 5556
129 Ga0207646_10033651 3300025922 Bacteria 4634
130 Ga0207646_10042488 3300025922 Bacteria 4083
131 Ga0207700_10023978 3300025928 Bacteria 4217
132 Ga0207700_10040042 3300025928 Bacteria 3417
133 Ga0207700_10136064 3300025928 Unclassified 2013
134 Ga0207664_10008880 3300025929 Bacteria 7034
135 Ga0207686_10063623 3300025934 Bacteria 2347
136 Ga0207691_10171681 3300025940 Bacteria 1899
137 Ga0207711_10044334 3300025941 Bacteria 3797
138 Ga0207711_10085268 3300025941 Unclassified 2767
139 Ga0207711_10142560 3300025941 Bacteria 2157
140 Ga0207711_10165570 3300025941 Bacteria 2004
141 Ga0207661_10044969 3300025944 Unclassified 3492
142 Ga0207661_10063794 3300025944 Bacteria 2984
143 Ga0207679_10140429 3300025945 Bacteria 1952
144 Ga0207667_10119478 3300025949 Bacteria 2716
145 Ga0207703_10019455 3300026035 Bacteria 5307
146 Ga0207703_10053979 3300026035 Unclassified 3267
147 Ga0207702_10011804 3300026078 Bacteria 7273
148 Ga0207641_10110004 3300026088 Unclassified 2441
149 Ga0207676_10019604 3300026095 Bacteria 4935
150 Ga0207674_10001031 3300026116 Bacteria 36347
151 Ga0207674_10014535 3300026116 Bacteria 8691
152 Ga0268264_10180174 3300028381 Unclassified 1918
153 Ga0373944_0031083 3300035089 Bacteria 1605
154 Ga0373953_0020964 3300035117 Bacteria 2447
155 Ga0373943_0005278 3300035170 Bacteria 5813
156 Ga0373955_0023272 3300035172 Bacteria 3154
157 Ga0373927_0060637 3300035695 Bacteria 2448
158 Ga0373947_0019304 3300035725 Bacteria 3929
159 Ga0373947_0021363 3300035725 Bacteria 3745
160 Ga0373937_0002790 3300036401 Bacteria 14588
161 Ga0373937_0004753 3300036401 Bacteria 11553
162 Ga0373937_0016549 3300036401 Bacteria 6549
163 Ga0373937_0073537 3300036401 Bacteria 3153
164 Ga0373925_0013161 3300037068 Bacteria 5988
165 Ga0373925_0019301 3300037068 Bacteria 4958
166 Ga0373925_0030717 3300037068 Bacteria 3944
167 Ga0395899_0055269 3300037312 Unclassified 2937
168 Ga0395899_0188798 3300037312 Bacteria 1443
169 Ga0395900_0042796 3300037418 Bacteria 4666
170 Ga0395900_0136245 3300037418 Bacteria 2515
171 Ga0395898_0038177 3300037466 Bacteria 4762
172 Ga0395905_0043326 3300037471 Bacteria 4222
173 Ga0395901_0019408 3300038443 Bacteria 6951
174 Ga0395901_0064457 3300038443 Bacteria 3814
175 Ga0451789_0395115 3300041443 Bacteria 1655
176 Ga0451802_0087826 3300041460 Unclassified 2224
177 Ga0451845_0238588 3300041501 Bacteria 1426
178 Ga0466969_0029105 3300044656 Bacteria 2823
179 Ga0466972_0054351 3300044658 Bacteria 1927
180 Ga0453683_0070763 3300044673 Bacteria 2182
181 Ga0453683_0079822 3300044673 Unclassified 2049
182 Ga0466965_0112008 3300044683 Bacteria 1403
183 Ga0466966_0034313 3300044684 Bacteria 3281
184 Ga0466966_0124261 3300044684 Bacteria 1583
185 Ga0466961_0007346 3300044693 Bacteria 7010
186 Ga0466961_0012981 3300044693 Bacteria 5329
187 Ga0466961_0050926 3300044693 Bacteria 2645
188 Ga0466961_0064554 3300044693 Bacteria 2327
189 Ga0466961_0088518 3300044693 Bacteria 1956
190 Ga0466963_0009683 3300044694 Bacteria 5810
191 Ga0466963_0011839 3300044694 Bacteria 5322
192 Ga0466963_0014299 3300044694 Bacteria 4890
193 Ga0466963_0037931 3300044694 Bacteria 3150
194 Ga0466963_0054917 3300044694 Bacteria 2648
195 Ga0466964_0000431 3300044706 Bacteria 12748
196 Ga0466964_0005212 3300044706 Bacteria 4821
197 Ga0466964_0012282 3300044706 Bacteria 3241
198 Ga0466971_0004874 3300044719 Bacteria 5804
199 Ga0466971_0014075 3300044719 Bacteria 3517
200 Ga0466971_0038547 3300044719 Bacteria 2144
201 Ga0466968_0002579 3300044735 Bacteria 6656
202 Ga0466968_0013754 3300044735 Unclassified 3185
203 Ga0466968_0042436 3300044735 Bacteria 1923
204 Ga0466957_0000932 3300044842 Bacteria 14961
205 Ga0466957_0003231 3300044842 Bacteria 8915
206 Ga0466957_0010136 3300044842 Bacteria 5393
207 Ga0466957_0013591 3300044842 Bacteria 4725
208 Ga0466957_0023161 3300044842 Bacteria 3669
209 Ga0466957_0092538 3300044842 Bacteria 1896
210 Ga0466960_0061522 3300044901 Bacteria 1843
211 Ga0466959_0009586 3300045049 Bacteria 6888
212 Ga0466959_0053192 3300045049 Bacteria 2961
213 Ga0466959_0081103 3300045049 Bacteria 2338
214 Ga0466959_0118805 3300045049 Bacteria 1881
215 Ga0466959_0121289 3300045049 Bacteria 1858
216 Ga0466959_0135254 3300045049 Bacteria 1745
217 Ga0466959_0159276 3300045049 Bacteria 1587
218 Ga0466959_0161175 3300045049 Bacteria 1577
219 Ga0466959_0177567 3300045049 Bacteria 1491
220 Ga0451576_0029162 3300045051 Bacteria 5905
221 Ga0451576_0079934 3300045051 Bacteria 3402
222 Ga0451576_0253310 3300045051 Unclassified 1840
223 Ga0466958_0000447 3300045836 Bacteria 17123
224 Ga0466958_0002602 3300045836 Bacteria 9112
225 Ga0466958_0004263 3300045836 Bacteria 7522
226 Ga0466958_0027231 3300045836 Bacteria 3383
227 Ga0466958_0057801 3300045836 Bacteria 2357
228 Ga0466958_0159869 3300045836 Bacteria 1423
229 Ga0466967_0000291 3300045976 Bacteria 22401
230 Ga0466967_0010953 3300045976 Bacteria 6835
231 Ga0466967_0017239 3300045976 Bacteria 5727
232 Ga0466967_0018299 3300045976 Bacteria 5595
233 Ga0466967_0037973 3300045976 Unclassified 4127
234 Ga0466967_0085046 3300045976 Bacteria 2863
235 Ga0466967_0111017 3300045976 Bacteria 2519
236 Ga0466967_0233876 3300045976 Bacteria 1750
237 Ga0495592_0018191 3300046454 Bacteria 5340
238 Ga0495592_0176966 3300046454 Bacteria 1456
239 Ga0495629_0008220 3300046459 Bacteria 7672
240 Ga0495629_0012630 3300046459 Bacteria 6117
241 Ga0495641_0009319 3300046461 Bacteria 5843
242 Ga0495641_0109621 3300046461 Unclassified 1232
243 Ga0495651_0005260 3300046462 Bacteria 9864
244 Ga0495651_0018171 3300046462 Bacteria 5443
245 Ga0495651_0040017 3300046462 Bacteria 3646
246 Ga0495653_0016826 3300046463 Bacteria 5950
247 Ga0495653_0021380 3300046463 Bacteria 5242
248 Ga0495653_0038303 3300046463 Bacteria 3763
249 Ga0495653_0043713 3300046463 Bacteria 3481
250 Ga0495653_0075536 3300046463 Bacteria 2507
251 Ga0495580_0010908 3300046472 Bacteria 7048
252 Ga0495582_0015555 3300046473 Bacteria 4178
253 Ga0495639_0002476 3300046475 Bacteria 8055
254 Ga0495662_0011153 3300046476 Bacteria 4390
255 Ga0495664_0012833 3300046477 Bacteria 4745
256 Ga0495608_0003386 3300046511 Bacteria 11415
257 Ga0495608_0006799 3300046511 Bacteria 8108
258 Ga0495618_0009427 3300046514 Bacteria 5894
259 Ga0495618_0012623 3300046514 Bacteria 5131
260 Ga0495628_0027705 3300046516 Bacteria 4606
261 Ga0495628_0033263 3300046516 Bacteria 4157
262 Ga0495628_0039520 3300046516 Bacteria 3774
263 Ga0495630_0092698 3300046517 Bacteria 2283
264 Ga0495630_0178670 3300046517 Bacteria 1618
265 Ga0495666_0004457 3300046526 Bacteria 7076
266 Ga0495652_0006081 3300046529 Bacteria 11284
267 Ga0495652_0037136 3300046529 Bacteria 4228
268 Ga0495652_0056901 3300046529 Bacteria 3319
269 Ga0495652_0062539 3300046529 Bacteria 3138
270 Ga0495665_0006740 3300046531 Bacteria 6191
271 Ga0495665_0031037 3300046531 Bacteria 2860
272 Ga0495640_0025401 3300046533 Bacteria 4297
273 Ga0495640_0063085 3300046533 Bacteria 2511
274 Ga0495586_0007217 3300046535 Bacteria 5926
275 Ga0495587_0031454 3300046536 Bacteria 3213
276 Ga0495645_0043331 3300046543 Bacteria 3283
277 Ga0495645_0045620 3300046543 Unclassified 3198
278 Ga0495645_0055457 3300046543 Bacteria 2878
279 Ga0495667_0007393 3300046559 Bacteria 7448
280 Ga0495667_0099316 3300046559 Bacteria 1884
281 Ga0495634_0009386 3300046642 Bacteria 7215
282 Ga0495634_0023250 3300046642 Bacteria 4358
283 Ga0495634_0037572 3300046642 Bacteria 3308
284 Ga0495634_0043820 3300046642 Bacteria 3031
285 Ga0495635_0002685 3300046663 Bacteria 12158
286 Ga0495635_0011361 3300046663 Bacteria 6247
287 Ga0495635_0013309 3300046663 Bacteria 5757
288 Ga0495657_0001879 3300046675 Bacteria 17868
289 Ga0495657_0003869 3300046675 Bacteria 12060
290 Ga0495657_0046221 3300046675 Bacteria 2949
291 Ga0495599_0020016 3300046678 Bacteria 4168
292 Ga0495599_0030482 3300046678 Bacteria 3384
293 Ga0495599_0030789 3300046678 Bacteria 3369
294 Ga0495623_0085630 3300046679 Bacteria 1943
295 Ga0495646_0045314 3300046680 Bacteria 2687
296 Ga0495658_0004106 3300046683 Bacteria 7170
297 Ga0495658_0010983 3300046683 Bacteria 4541
298 Ga0495658_0050180 3300046683 Bacteria 2359
299 Ga0495658_0087555 3300046683 Bacteria 1839
300 Ga0495613_0011560 3300046689 Bacteria 6562
301 Ga0495613_0017910 3300046689 Bacteria 5281
302 Ga0495624_0011468 3300046690 Bacteria 6091
303 Ga0495600_0007187 3300046809 Bacteria 6799
304 Ga0495600_0007442 3300046809 Bacteria 6700
305 Ga0495600_0064866 3300046809 Bacteria 2387
306 Ga0495581_0002370 3300047315 Bacteria 10633
307 Ga0495581_0063248 3300047315 Bacteria 2138
308 Ga0495604_0012851 3300047317 Bacteria 6667
309 Ga0495604_0022473 3300047317 Bacteria 5036
310 Ga0495604_0073543 3300047317 Bacteria 2580
311 Ga0495674_0008907 3300047319 Bacteria 9546
312 Ga0495674_0043433 3300047319 Bacteria 4000
313 Ga0495676_0024636 3300047321 Bacteria 5205
314 Ga0495680_0001141 3300047322 Bacteria 29263
315 Ga0495680_0008150 3300047322 Bacteria 9551
316 Ga0495680_0012860 3300047322 Bacteria 7333
317 Ga0495680_0017350 3300047322 Bacteria 6151
318 Ga0495680_0050890 3300047322 Bacteria 3237
319 Ga0495684_0005204 3300047471 Bacteria 10138
320 Ga0495684_0017727 3300047471 Bacteria 5484
321 Ga0495684_0036029 3300047471 Bacteria 3793
322 Ga0495684_0047840 3300047471 Bacteria 3270
323 Ga0495593_0007427 3300047673 Bacteria 6414
324 Ga0495602_0007463 3300048088 Bacteria 11438
325 Ga0495602_0050808 3300048088 Bacteria 3701
326 Ga0495602_0054276 3300048088 Bacteria 3539
327 Ga0495602_0099367 3300048088 Bacteria 2392
328 Ga0495614_0023745 3300048089 Bacteria 2646
329 Ga0496101_0005711 3300048904 Bacteria 7945
330 Ga0496102_0002544 3300048905 Bacteria 15560
331 Ga0496102_0014820 3300048905 Bacteria 6780
332 Ga0496104_0001544 3300048907 Bacteria 19867
333 Ga0496104_0177559 3300048907 Bacteria 2040
334 Ga0496107_0000933 3300048910 Bacteria 17270
335 Ga0496108_0023669 3300048911 Bacteria 5054
336 Ga0496108_0033200 3300048911 Bacteria 4287
337 Ga0496109_0010583 3300048912 Bacteria 7889
338 Ga0496111_0213871 3300048914 Bacteria 1432
339 Ga0496112_0000001 3300048915 Bacteria 1346031
340 Ga0496112_0001209 3300048915 Bacteria 19393
341 Ga0496112_0009482 3300048915 Bacteria 8776
342 Ga0496112_0013683 3300048915 Bacteria 7498
343 Ga0496112_0033236 3300048915 Bacteria 5012
344 Ga0496112_0034670 3300048915 Bacteria 4912
345 Ga0496112_0037310 3300048915 Bacteria 4744
346 Ga0496112_0057820 3300048915 Bacteria 3819
347 Ga0496112_0068094 3300048915 Bacteria 3515
348 Ga0496112_0073134 3300048915 Bacteria 3389
349 Ga0496112_0445803 3300048915 Bacteria 1232
350 Ga0496113_0000918 3300048916 Bacteria 15578
351 Ga0496113_0011258 3300048916 Bacteria 5958
352 Ga0496113_0053362 3300048916 Bacteria 3023
353 Ga0496114_0204501 3300048917 Bacteria 1730
354 Ga0496115_0000406 3300048918 Bacteria 35489
355 Ga0496115_0078658 3300048918 Bacteria 2683
356 Ga0496115_0191925 3300048918 Bacteria 1688
357 Ga0501067_0042071 3300049583 Bacteria 2537
358 Ga0501067_0068376 3300049583 Bacteria 1966
359 Ga0501069_0005898 3300049585 Bacteria 6381
360 Ga0501069_0006991 3300049585 Bacteria 5904
361 nmdc:mga08y16_96735_c1 3300050511 Bacteria 3074
362 nmdc:mga08x19_2510_c1 3300050514 Bacteria 11152
363 nmdc:mga08x19_4947_c1 3300050514 Bacteria 7868
364 nmdc:mga0a205_228160_c1 3300050515 Bacteria 1746
365 Ga0495601_0022796 3300053077 Bacteria 3846
366 Ga0495601_0032735 3300053077 Unclassified 3237
367 Ga0495601_0112014 3300053077 Bacteria 1768
368 Ga0495601_0174433 3300053077 Bacteria 1405
369 Ga0495612_0005783 3300053078 Bacteria 5106
370 Ga0495595_0012152 3300053084 Bacteria 3614
371 Ga0495619_0012044 3300053085 Bacteria 5450
372 Ga0495619_0012666 3300053085 Bacteria 5308
373 Ga0495619_0018596 3300053085 Unclassified 4409
374 Ga0495619_0047424 3300053085 Bacteria 2828
375 Ga0495619_0059122 3300053085 Bacteria 2546
376 Ga0495619_0067129 3300053085 Bacteria 2394
377 Ga0587111_0010370 3300060346 Unclassified 1598
378 Ga0466962_0002698 3300061719 Bacteria 8443
379 Ga0466962_0101591 3300061719 Bacteria 1381
380 2812372736 2811994882 Bacteria 4688362
381 2819428854 2818991318 Bacteria 5266538
382 2819664516 2818991458 Bacteria 4794049
383 2819689740 2818991462 Bacteria 4320267
384 2819726703 2818991469 Bacteria 4644110
385 Ga0373956_0019811
386 LJNas_1000154
387 LJNas_1001282
388 rootL2_10200242
389 Ga0058859_10589926
390 Ga0070683_100005806
391 Ga0070680_100081100
392 Ga0070680_100278182
393 Ga0070660_100096050
394 Ga0070689_100199500
395 Ga0070691_10006008
396 Ga0070661_100026472
397 Ga0070667_100033966
398 Ga0070709_10127820
399 Ga0070714_100010549
400 Ga0070714_100052943
401 Ga0070713_100000769
402 Ga0070713_100056780
403 Ga0070708_100000027
404 Ga0070681_10004326
405 Ga0070681_10040150
406 Ga0070681_10095201
407 Ga0070706_100000117
408 Ga0070706_100009275
409 Ga0070706_100041589
410 Ga0070706_100122250
411 Ga0070707_100000060
412 Ga0070707_100001659
413 Ga0070707_100012869
414 Ga0070707_100028045
415 Ga0070707_100133983
416 Ga0070707_100300387
417 Ga0070698_100041971
418 Ga0070698_100045483
419 Ga0070698_100231516
420 Ga0070698_100253575
421 Ga0070699_100000232
422 Ga0070699_100001466
423 Ga0070699_100021872
424 Ga0070699_100025040
425 Ga0070699_100030898
426 Ga0070679_100004179
427 Ga0070679_100079333
428 Ga0070684_100001432
429 Ga0070684_100110829
430 Ga0070697_100000029
431 Ga0070697_100022917
432 Ga0070697_100042953
433 Ga0070672_100032626
434 Ga0070695_100027577
435 Ga0070695_100105473
436 Ga0070696_100048451
437 Ga0070704_100024178
438 Ga0068855_100060471
439 Ga0070664_100014555
440 Ga0070664_100092952
441 Ga0068857_100000294
442 Ga0068857_100008800
443 Ga0068856_100000378
444 Ga0068856_100206097
445 Ga0068856_100277732
446 Ga0068852_100105519
447 Ga0068859_100171303
448 Ga0068864_100153305
449 Ga0068864_100304388
450 Ga0068858_100114952
451 Ga0068858_100126110
452 Ga0070717_10002102
453 Ga0070717_10028778
454 Ga0070712_100003895
455 Ga0070712_100098809
456 Ga0097621_100107202
457 Ga0097621_100240258
458 Ga0075436_100000825
459 Ga0075436_100001260
460 Ga0075436_100066514
461 Ga0097620_100171302
462 Ga0099795_10030336
463 Ga0105240_10019483
464 Ga0105240_10197513
465 Ga0111539_10518741
466 Ga0105245_10058320
467 Ga0105242_10154706
468 Ga0105242_10210347
469 Ga0105248_10008489
470 Ga0105248_10019922
471 Ga0105248_10031216
472 Ga0105248_10086904
473 Ga0105248_10119236
474 Ga0105237_10154405
475 Ga0099796_10022717
476 Ga0105246_10023589
477 Ga0157370_10304252
478 Ga0157369_10019574
479 Ga0157369_10083148
480 Ga0157378_10013514
481 Ga0163162_10277440
482 Ga0157375_10073210
483 Ga0163163_10066037
484 Ga0163163_10198246
485 Ga0157380_10046982
486 Ga0157379_10057521
487 Ga0197907_10273545
488 Ga0197907_10944824
489 Ga0206356_10104720
490 Ga0206356_10896465
491 Ga0206355_1366275
492 Ga0206351_10055424
493 Ga0206352_11199873
494 Ga0206350_10617437
495 Ga0206350_10673208
496 Ga0206354_10452058
497 Ga0206353_10001560
498 Ga0206353_10003984
499 Ga0207692_10035675
500 Ga0207647_10090877
501 Ga0207705_10217256
502 Ga0207684_10000148
503 Ga0207684_10010749
504 Ga0207684_10055580
505 Ga0207693_10002756
506 Ga0207660_10064483
507 Ga0207646_10000079
508 Ga0207646_10000143
509 Ga0207646_10003158
510 Ga0207646_10006268
511 Ga0207646_10016873
512 Ga0207646_10024273
513 Ga0207646_10033651
514 Ga0207646_10042488
515 Ga0207700_10023978
516 Ga0207700_10040042
517 Ga0207700_10136064
518 Ga0207664_10008880
519 Ga0207686_10063623
520 Ga0207691_10171681
521 Ga0207711_10044334
522 Ga0207711_10085268
523 Ga0207711_10142560
524 Ga0207711_10165570
525 Ga0207661_10044969
526 Ga0207661_10063794
527 Ga0207679_10140429
528 Ga0207667_10119478
529 Ga0207703_10019455
530 Ga0207703_10053979
531 Ga0207702_10011804
532 Ga0207641_10110004
533 Ga0207676_10019604
534 Ga0207674_10001031
535 Ga0207674_10014535
536 Ga0268264_10180174
537 Ga0373944_0031083
538 Ga0373953_0020964
539 Ga0373943_0005278
540 Ga0373955_0023272
541 Ga0373927_0060637
542 Ga0373947_0019304
543 Ga0373947_0021363
544 Ga0373937_0002790
545 Ga0373937_0004753
546 Ga0373937_0016549
547 Ga0373937_0073537
548 Ga0373925_0013161
549 Ga0373925_0019301
550 Ga0373925_0030717
551 Ga0395899_0055269
552 Ga0395899_0188798
553 Ga0395900_0042796
554 Ga0395900_0136245
555 Ga0395898_0038177
556 Ga0395905_0043326
557 Ga0395901_0019408
558 Ga0395901_0064457
559 Ga0451789_0395115
560 Ga0451802_0087826
561 Ga0451845_0238588
562 Ga0466969_0029105
563 Ga0466972_0054351
564 Ga0453683_0070763
565 Ga0453683_0079822
566 Ga0466965_0112008
567 Ga0466966_0034313
568 Ga0466966_0124261
569 Ga0466961_0007346
570 Ga0466961_0012981
571 Ga0466961_0050926
572 Ga0466961_0064554
573 Ga0466961_0088518
574 Ga0466963_0009683
575 Ga0466963_0011839
576 Ga0466963_0014299
577 Ga0466963_0037931
578 Ga0466963_0054917
579 Ga0466964_0000431
580 Ga0466964_0005212
581 Ga0466964_0012282
582 Ga0466971_0004874
583 Ga0466971_0014075
584 Ga0466971_0038547
585 Ga0466968_0002579
586 Ga0466968_0013754
587 Ga0466968_0042436
588 Ga0466957_0000932
589 Ga0466957_0003231
590 Ga0466957_0010136
591 Ga0466957_0013591
592 Ga0466957_0023161
593 Ga0466957_0092538
594 Ga0466960_0061522
595 Ga0466959_0009586
596 Ga0466959_0053192
597 Ga0466959_0081103
598 Ga0466959_0118805
599 Ga0466959_0121289
600 Ga0466959_0135254
601 Ga0466959_0159276
602 Ga0466959_0161175
603 Ga0466959_0177567
604 Ga0451576_0029162
605 Ga0451576_0079934
606 Ga0451576_0253310
607 Ga0466958_0000447
608 Ga0466958_0002602
609 Ga0466958_0004263
610 Ga0466958_0027231
611 Ga0466958_0057801
612 Ga0466958_0159869
613 Ga0466967_0000291
614 Ga0466967_0010953
615 Ga0466967_0017239
616 Ga0466967_0018299
617 Ga0466967_0037973
618 Ga0466967_0085046
619 Ga0466967_0111017
620 Ga0466967_0233876
621 Ga0495592_0018191
622 Ga0495592_0176966
623 Ga0495629_0008220
624 Ga0495629_0012630
625 Ga0495641_0009319
626 Ga0495641_0109621
627 Ga0495651_0005260
628 Ga0495651_0018171
629 Ga0495651_0040017
630 Ga0495653_0016826
631 Ga0495653_0021380
632 Ga0495653_0038303
633 Ga0495653_0043713
634 Ga0495653_0075536
635 Ga0495580_0010908
636 Ga0495582_0015555
637 Ga0495639_0002476
638 Ga0495662_0011153
639 Ga0495664_0012833
640 Ga0495608_0003386
641 Ga0495608_0006799
642 Ga0495618_0009427
643 Ga0495618_0012623
644 Ga0495628_0027705
645 Ga0495628_0033263
646 Ga0495628_0039520
647 Ga0495630_0092698
648 Ga0495630_0178670
649 Ga0495666_0004457
650 Ga0495652_0006081
651 Ga0495652_0037136
652 Ga0495652_0056901
653 Ga0495652_0062539
654 Ga0495665_0006740
655 Ga0495665_0031037
656 Ga0495640_0025401
657 Ga0495640_0063085
658 Ga0495586_0007217
659 Ga0495587_0031454
660 Ga0495645_0043331
661 Ga0495645_0045620
662 Ga0495645_0055457
663 Ga0495667_0007393
664 Ga0495667_0099316
665 Ga0495634_0009386
666 Ga0495634_0023250
667 Ga0495634_0037572
668 Ga0495634_0043820
669 Ga0495635_0002685
670 Ga0495635_0011361
671 Ga0495635_0013309
672 Ga0495657_0001879
673 Ga0495657_0003869
674 Ga0495657_0046221
675 Ga0495599_0020016
676 Ga0495599_0030482
677 Ga0495599_0030789
678 Ga0495623_0085630
679 Ga0495646_0045314
680 Ga0495658_0004106
681 Ga0495658_0010983
682 Ga0495658_0050180
683 Ga0495658_0087555
684 Ga0495613_0011560
685 Ga0495613_0017910
686 Ga0495624_0011468
687 Ga0495600_0007187
688 Ga0495600_0007442
689 Ga0495600_0064866
690 Ga0495581_0002370
691 Ga0495581_0063248
692 Ga0495604_0012851
693 Ga0495604_0022473
694 Ga0495604_0073543
695 Ga0495674_0008907
696 Ga0495674_0043433
697 Ga0495676_0024636
698 Ga0495680_0001141
699 Ga0495680_0008150
700 Ga0495680_0012860
701 Ga0495680_0017350
702 Ga0495680_0050890
703 Ga0495684_0005204
704 Ga0495684_0017727
705 Ga0495684_0036029
706 Ga0495684_0047840
707 Ga0495593_0007427
708 Ga0495602_0007463
709 Ga0495602_0050808
710 Ga0495602_0054276
711 Ga0495602_0099367
712 Ga0495614_0023745
713 Ga0496101_0005711
714 Ga0496102_0002544
715 Ga0496102_0014820
716 Ga0496104_0001544
717 Ga0496104_0177559
718 Ga0496107_0000933
719 Ga0496108_0023669
720 Ga0496108_0033200
721 Ga0496109_0010583
722 Ga0496111_0213871
723 Ga0496112_0000001
724 Ga0496112_0001209
725 Ga0496112_0009482
726 Ga0496112_0013683
727 Ga0496112_0033236
728 Ga0496112_0034670
729 Ga0496112_0037310
730 Ga0496112_0057820
731 Ga0496112_0068094
732 Ga0496112_0073134
733 Ga0496112_0445803
734 Ga0496113_0000918
735 Ga0496113_0011258
736 Ga0496113_0053362
737 Ga0496114_0204501
738 Ga0496115_0000406
739 Ga0496115_0078658
740 Ga0496115_0191925
741 Ga0501067_0042071
742 Ga0501067_0068376
743 Ga0501069_0005898
744 Ga0501069_0006991
745 nmdc:mga08y16_96735_c1
746 nmdc:mga08x19_2510_c1
747 nmdc:mga08x19_4947_c1
748 nmdc:mga0a205_228160_c1
749 Ga0495601_0022796
750 Ga0495601_0032735
751 Ga0495601_0112014
752 Ga0495601_0174433
753 Ga0495612_0005783
754 Ga0495595_0012152
755 Ga0495619_0012044
756 Ga0495619_0012666
757 Ga0495619_0018596
758 Ga0495619_0047424
759 Ga0495619_0059122
760 Ga0495619_0067129
761 Ga0587111_0010370
762 Ga0466962_0002698
763 Ga0466962_0101591
764 2812372736
765 2819428854
766 2819664516
767 2819689740
768 2819726703

MSA Aligner

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
6a7i-assembly1.cif.gz_A cyp154c4 from streptomyces sp. w2061 0.7622 205 220
7p5x-assembly1.cif.gz_AC mycobacterial rnap with transcriptional activator pafbc 0.7588 54 78
7z8q-assembly1.cif.gz_c cryo-em structure of mycobacterium tuberculosis rna polymerase core 0.7123 55 78
6vw0-assembly1.cif.gz_C mycobacterium tuberculosis rnap s456l mutant open promoter complex 0.7099 55 78
8dy9-assembly1.cif.gz_C streptomyces venezuelae rnap unconstrained open promoter complex with whia and whib transcription factors 0.7091 54 78
ID Description Score Start End Superfamily
af_Q4E4R9_6_95_2.30.29.170 Mainly Beta;Roll;PH-domain like; 0.7671 59 80 2.30.29.170
4kbjA02 Alpha Beta;Alpha-Beta Complex;Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3;RNA polymerase Rpb2, domain 2 0.7226 55 78 3.90.1110.10
af_A0A0N7KNK9_93_200_3.30.430.20 Alpha Beta;2-Layer Sandwich;Killer Toxin P4; Chain A;Gnk2 domain, C-X8-C-X2-C motif 0.7144 59 82 3.30.430.20
af_A0A1D6E9H4_7_153_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.6995 54 79 2.40.50.140
af_Q9FHE9_195_352_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.6906 58 79 2.60.120.260
ID Description Score Start End GO Terms
AF-A0A3N5HBM3-F1-model_v4 DNRLRE domain-containing protein 0.992 32 425
AF-A0A3N5HBM3-F1-model_v4 DNRLRE domain-containing protein 0.9604 32 425
AF-A0A534ZST1-F1-model_v4 DUF1559 domain-containing protein 0.9491 268 424
AF-A0A534ZST1-F1-model_v4 DUF1559 domain-containing protein 0.926 268 424
AF-A0A535I172-F1-model_v4 Uncharacterized protein 0.8999 10 424

Map