F429609

General Info

Members Datasets Scaffolds Average Seq Length
383 259 766 465

Family's Representative Sequence

Representative Sequence 3300025294|Ga0209025_1018806|Ga0209025_10188063
Length 533
Sequence MYVHSKKNRLYYVNRKRDITYDCETLSIFLELLCSMFHNVSKRCSEMSKVSMEMMNALIYERRKKMDTVILSRIQFASTTLFHFIFVPLSIGLVFLVAIMETMYVVKKDEQYKKMAKFWGHLFLINFAVGVVTGILQEFQFGMNWSEYSRFVGDVFGAPLAIEALLAFFMESTFLGLWIFGWDRLPKWLHCLCIWLVSLGTIFSAFFILTANSFMQHPVGMELNNGRLEMNDFFKLLTNGQLWVEFPHTILGSFATGAFFITGVSAIMLLKKKHLAFAKKSFQVAIIVGLVSGVGIALSGHEQAGYLVKTQPMKMAASEGLWENSGSPGAWTVTANIHPDEKKNTGEIKIPYLLSFLSYGKFSGSVPGMNELQEQYTAKYGAGNYIPPVRTTFWSFRIMAGLGGVLCALGIWGTYLLSRKKLQESKLFLRIMTIAIAFPFLGSSAGWIMTEIGRQPWVVFGYMKTEDAVSPGVTAGELLFSIISFSFFYLILAVIMVFLFVKEIKKGPDHDHEAHTKVVSTDPFTKEGYNVFS

Samples

Sample ID Description Type Environment
1 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
8 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
11 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
26 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
43 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
45 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
54 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
59 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
64 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
65 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
66 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
67 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
68 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
69 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
74 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
75 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
77 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
78 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
79 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
80 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
81 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
96 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
97 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
98 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
99 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
100 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
101 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
102 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
103 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
104 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
105 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
106 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
114 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
115 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
116 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
117 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
118 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
119 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
120 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
141 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
142 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
143 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
144 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
145 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
146 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
147 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
148 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
149 2554235283 Bacillus safensis VK Isolate Rhizosphere
150 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
151 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
152 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
153 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
154 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
155 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
156 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
157 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
158 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
159 2643221731 Bacillus sp. Root147 Isolate Unclassified
160 2643221732 Bacillus sp. Root239 Isolate Unclassified
161 2643221735 Bacillus sp. Root920 Isolate Unclassified
162 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
163 2671180694 Paenibacillus sp. A3 Isolate Unclassified
164 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
165 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
166 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
167 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
168 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
169 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
170 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
171 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
172 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
173 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
174 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
175 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
176 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
177 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
178 2811994870 Bacillus sp. JB4 Isolate Unclassified
179 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
180 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
181 2818991441 Niallia circulans 3243 Isolate Rhizosphere
182 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
183 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
184 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
185 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
186 2842882022 Bacillus sp. R-71893 Isolate Unclassified
187 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
188 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
189 2860837431 Bacillus sp. WR11 Isolate Unclassified
190 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
191 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
192 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
193 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
194 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
195 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
196 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
197 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
198 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
199 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
200 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
201 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
202 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
203 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
204 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
205 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
206 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
207 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
208 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
209 2919720352 Priestia megaterium 4340 Isolate Unclassified
210 2919726948 Bacillus pumilus 4489 Isolate Unclassified
211 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
212 2929004312 Priestia megaterium 1104 Isolate Unclassified
213 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
214 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
215 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
216 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
217 2939615513 Lactococcus lactis 1925 Isolate Rhizosphere
218 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
219 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
220 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
221 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
222 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
223 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
224 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
225 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
226 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
227 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
228 2969141011 Bacillus velezensis MH25 Isolate Unclassified
229 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
230 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
231 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
232 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
233 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
234 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
235 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
236 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
237 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
238 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
239 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
240 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
241 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
242 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
243 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
244 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
245 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
246 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
247 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified
248 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
249 8022653035 Bacillus sp. Rc4 Isolate Unclassified
250 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
251 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
252 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
253 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
254 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
255 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
256 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
257 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
258 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere
259 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 67.89
Metatranscriptomes 2.09
Isolates 30.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.96
Nodule 0.78
Rhizoplane 2.61
Rhizosphere 72.32
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209025_1018806 3300025294 Bacteria 3888
2 SwRhRL2b_contig_890794 2162886007 Bacteria 11450
3 JGI25151J46595_10000054 3300003187 Bacteria 154819
4 rootL2_10013117 3300003322 Bacteria 8119
5 rootH1_10114854 3300003323 Bacteria 2827
6 Ga0006562J51391_1000506 3300003578 Bacteria 36880
7 Ga0006562J51391_1005606 3300003578 Bacteria 11770
8 Ga0055532_1000052 3300003758 Bacteria 164911
9 Ga0055528_1009235 3300003790 Bacteria 4138
10 Ga0065704_10000250 3300005289 Bacteria 52865
11 Ga0065704_10113028 3300005289 Bacteria 1921
12 Ga0065712_10098846 3300005290 Bacteria 2107
13 Ga0065707_10000561 3300005295 Bacteria 22857
14 Ga0065707_10101547 3300005295 Bacteria 2854
15 Ga0065707_10105556 3300005295 Bacteria 2638
16 Ga0070670_100016703 3300005331 Bacteria 6300
17 Ga0070689_100009119 3300005340 Bacteria 7023
18 Ga0070669_100053844 3300005353 Bacteria 2946
19 Ga0070707_100023754 3300005468 Bacteria 5798
20 Ga0070698_100138071 3300005471 Bacteria 2391
21 Ga0070699_100011441 3300005518 Bacteria 7662
22 Ga0070699_100013056 3300005518 Bacteria 7158
23 Ga0068857_100107742 3300005577 Bacteria 2503
24 Ga0068859_100017911 3300005617 Bacteria 7119
25 Ga0068859_100295590 3300005617 Bacteria 1713
26 Ga0068866_10095834 3300005718 Bacteria 1626
27 Ga0068862_100098225 3300005844 Bacteria 2557
28 Ga0075428_100070567 3300006844 Bacteria 3819
29 Ga0075429_100009263 3300006880 Bacteria 8548
30 Ga0097620_100017911 3300006931 Bacteria 7119
31 Ga0097620_100295584 3300006931 Bacteria 1713
32 Ga0079104_1000084 3300006946 Bacteria 136884
33 Ga0105244_10014118 3300009036 Bacteria 4634
34 Ga0111539_10149945 3300009094 Bacteria 2730
35 Ga0105245_10108476 3300009098 Bacteria 2578
36 Ga0105247_10022749 3300009101 Bacteria 3774
37 Ga0114129_10000238 3300009147 Bacteria 61413
38 Ga0114129_10012935 3300009147 Bacteria 11877
39 Ga0114129_10036015 3300009147 Bacteria 6989
40 Ga0114129_10044995 3300009147 Bacteria 6207
41 Ga0114129_10133323 3300009147 Bacteria 3411
42 Ga0114129_10341433 3300009147 Bacteria 1986
43 Ga0114129_10543986 3300009147 Bacteria 1511
44 Ga0105243_10033254 3300009148 Bacteria 3987
45 Ga0105243_10039162 3300009148 Bacteria 3695
46 Ga0105242_10020020 3300009176 Bacteria 5244
47 Ga0105242_10110962 3300009176 Bacteria 2338
48 Ga0105238_10075232 3300009551 Bacteria 3369
49 Ga0105239_10065449 3300010375 Bacteria 3992
50 Ga0105246_10001972 3300011119 Bacteria 12373
51 Ga0105246_10064766 3300011119 Bacteria 2554
52 Ga0105246_10107734 3300011119 Bacteria 2041
53 Ga0157378_10009585 3300013297 Bacteria 8433
54 Ga0157375_10078531 3300013308 Bacteria 3334
55 Ga0157376_10006446 3300014969 Bacteria 8290
56 Ga0209784_100474 3300025224 Bacteria 16520
57 Ga0209566_100153 3300025225 Bacteria 78294
58 Ga0209147_100028 3300025229 Bacteria 383994
59 Ga0209147_100396 3300025229 Bacteria 29877
60 Ga0209437_100604 3300025233 Bacteria 22343
61 Ga0209258_103850 3300025242 Bacteria 3056
62 Ga0209025_1000011 3300025294 Bacteria 976387
63 Ga0209025_1000095 3300025294 Bacteria 240057
64 Ga0209025_1000403 3300025294 Bacteria 87822
65 Ga0209025_1001171 3300025294 Bacteria 37155
66 Ga0209025_1017144 3300025294 Bacteria 4207
67 Ga0207426_1005042 3300025302 Bacteria 6191
68 Ga0207696_1014484 3300025711 Bacteria 2703
69 Ga0207713_1007136 3300025735 Bacteria 6676
70 Ga0207642_10076928 3300025899 Bacteria 1608
71 Ga0207710_10076347 3300025900 Bacteria 1546
72 Ga0207646_10020822 3300025922 Bacteria 6071
73 Ga0207664_10097916 3300025929 Bacteria 2417
74 Ga0207670_10016366 3300025936 Bacteria 4455
75 Ga0207668_10175313 3300025972 Bacteria 1686
76 Ga0209281_1000154 3300027111 Bacteria 166618
77 Ga0209371_1001621 3300027312 Bacteria 14592
78 Ga0209968_1004049 3300027526 Bacteria 2201
79 Ga0207428_10088960 3300027907 Bacteria 2400
80 Ga0268265_10104922 3300028380 Bacteria 2292
81 Ga0265326_10020097 3300028558 Bacteria 1915
82 Ga0265318_10017223 3300028577 Bacteria 2968
83 Ga0265338_10112723 3300028800 Bacteria 2186
84 Ga0268256_1001408 3300030500 Bacteria 14592
85 Ga0265340_10008273 3300031247 Bacteria 5619
86 Ga0307408_100074104 3300031548 Bacteria 2525
87 Ga0316575_10008004 3300031665 Bacteria 3840
88 Ga0316579_10048444 3300031691 Bacteria 1985
89 Ga0316576_10003371 3300031727 Bacteria 9341
90 Ga0316576_10003457 3300031727 Bacteria 9256
91 Ga0316576_10004243 3300031727 Bacteria 8562
92 Ga0316576_10007687 3300031727 Bacteria 6799
93 Ga0316576_10012344 3300031727 Bacteria 5639
94 Ga0316576_10012949 3300031727 Bacteria 5523
95 Ga0316576_10013681 3300031727 Bacteria 5403
96 Ga0316576_10143026 3300031727 Bacteria 1801
97 Ga0316576_10152656 3300031727 Bacteria 1741
98 Ga0316578_10001382 3300031728 Bacteria 9791
99 Ga0316578_10002571 3300031728 Bacteria 8023
100 Ga0316578_10046973 3300031728 Bacteria 2518
101 Ga0316578_10063334 3300031728 Bacteria 2181
102 Ga0316578_10106162 3300031728 Bacteria 1685
103 Ga0316577_10004383 3300031733 Bacteria 7281
104 Ga0316577_10011180 3300031733 Bacteria 4860
105 Ga0316577_10021126 3300031733 Bacteria 3610
106 Ga0316577_10026241 3300031733 Bacteria 3243
107 Ga0307413_10101541 3300031824 Bacteria 1902
108 Ga0307410_10000820 3300031852 Bacteria 13175
109 Ga0307407_10002471 3300031903 Bacteria 7249
110 Ga0307416_100004339 3300032002 Bacteria 8529
111 Ga0307416_100070372 3300032002 Bacteria 2901
112 Ga0316583_10000919 3300032133 Bacteria 9487
113 Ga0316580_10000667 3300032139 Bacteria 8154
114 Ga0316593_10024044 3300032168 Bacteria 1929
115 Ga0316593_10044420 3300032168 Bacteria 1487
116 Ga0316588_1007356 3300033528 Bacteria 2232
117 Ga0316596_1001098 3300033541 Bacteria 5264
118 Ga0316596_1002960 3300033541 Bacteria 3687
119 Ga0316596_1008443 3300033541 Bacteria 2454
120 Ga0316574_0003398 3300035398 Bacteria 8201
121 Ga0316574_0020106 3300035398 Bacteria 3948
122 Ga0316574_0044187 3300035398 Bacteria 2756
123 Ga0316574_0050359 3300035398 Bacteria 2592
124 Ga0373931_0112632 3300035691 Bacteria 1546
125 Ga0316582_0002236 3300036647 Bacteria 8999
126 Ga0316582_0027806 3300036647 Bacteria 3421
127 Ga0316582_0050752 3300036647 Bacteria 2629
128 Ga0316582_0056842 3300036647 Bacteria 2498
129 Ga0316582_0069051 3300036647 Bacteria 2283
130 Ga0316582_0099489 3300036647 Bacteria 1924
131 Ga0316582_0126643 3300036647 Bacteria 1713
132 Ga0316584_0003218 3300036712 Bacteria 10575
133 Ga0316584_0004946 3300036712 Bacteria 8869
134 Ga0316584_0009861 3300036712 Bacteria 6649
135 Ga0316584_0023588 3300036712 Bacteria 4495
136 Ga0316584_0029382 3300036712 Bacteria 4057
137 Ga0316584_0070309 3300036712 Bacteria 2624
138 Ga0316584_0077648 3300036712 Bacteria 2487
139 Ga0316584_0091471 3300036712 Bacteria 2278
140 Ga0395900_0083125 3300037418 Bacteria 3290
141 Ga0395900_0183377 3300037418 Bacteria 2126
142 Ga0395898_0062181 3300037466 Bacteria 3626
143 Ga0395905_0134134 3300037471 Bacteria 2329
144 Ga0316581_0017175 3300037588 Bacteria 2086
145 Ga0395901_0062265 3300038443 Bacteria 3883
146 Ga0395901_0074843 3300038443 Bacteria 3532
147 Ga0451577_0002977 3300042876 Bacteria 19376
148 Ga0451577_0012922 3300042876 Bacteria 7838
149 Ga0451577_0041179 3300042876 Bacteria 4147
150 Ga0451577_0103617 3300042876 Bacteria 2543
151 Ga0453683_0001192 3300044673 Bacteria 23417
152 Ga0453683_0010843 3300044673 Bacteria 6031
153 Ga0453683_0031308 3300044673 Bacteria 3361
154 Ga0453683_0060401 3300044673 Bacteria 2370
155 Ga0466961_0003396 3300044693 Bacteria 9936
156 Ga0453684_0000007 3300044712 Bacteria 1301482
157 Ga0453684_0000505 3300044712 Bacteria 152407
158 Ga0453684_0000599 3300044712 Bacteria 133150
159 Ga0453684_0000701 3300044712 Bacteria 119225
160 Ga0453684_0000881 3300044712 Bacteria 100374
161 Ga0453684_0001353 3300044712 Bacteria 71575
162 Ga0453684_0001413 3300044712 Bacteria 69115
163 Ga0453684_0004398 3300044712 Bacteria 29813
164 Ga0453684_0004553 3300044712 Bacteria 29010
165 Ga0453684_0010131 3300044712 Bacteria 16189
166 Ga0453684_0016113 3300044712 Bacteria 11727
167 Ga0453684_0016814 3300044712 Bacteria 11395
168 Ga0453684_0032511 3300044712 Bacteria 7300
169 Ga0453684_0038836 3300044712 Bacteria 6496
170 Ga0453684_0041428 3300044712 Bacteria 6229
171 Ga0453684_0052503 3300044712 Bacteria 5329
172 Ga0453684_0065613 3300044712 Bacteria 4629
173 Ga0453684_0076941 3300044712 Bacteria 4187
174 Ga0453684_0116455 3300044712 Bacteria 3236
175 Ga0453684_0126048 3300044712 Bacteria 3082
176 Ga0453684_0160839 3300044712 Bacteria 2656
177 Ga0453684_0173143 3300044712 Bacteria 2541
178 Ga0453684_0251792 3300044712 Bacteria 2028
179 Ga0453684_0396608 3300044712 Bacteria 1546
180 Ga0453684_0405935 3300044712 Bacteria 1525
181 Ga0466970_0064321 3300044765 Bacteria 1967
182 Ga0466957_0055548 3300044842 Bacteria 2420
183 Ga0466959_0159824 3300045049 Bacteria 1584
184 Ga0451576_0009124 3300045051 Bacteria 11531
185 Ga0451576_0016915 3300045051 Bacteria 8032
186 Ga0451576_0021503 3300045051 Bacteria 7012
187 Ga0451576_0025909 3300045051 Bacteria 6315
188 Ga0451576_0031103 3300045051 Bacteria 5694
189 Ga0451576_0115663 3300045051 Bacteria 2792
190 Ga0466958_0007279 3300045836 Bacteria 6074
191 Ga0495650_0000555 3300046471 Bacteria 53150
192 Ga0495607_0000044 3300046501 Bacteria 125410
193 Ga0495620_0010620 3300046515 Bacteria 4850
194 Ga0495631_0057347 3300046518 Bacteria 1695
195 Ga0495633_0060494 3300046558 Bacteria 1775
196 Ga0495660_0001944 3300046810 Bacteria 13448
197 Ga0495672_0015389 3300047320 Bacteria 5195
198 Ga0495676_0109011 3300047321 Bacteria 2036
199 Ga0496101_0128176 3300048904 Bacteria 1924
200 Ga0496102_0012959 3300048905 Bacteria 7219
201 Ga0496103_0031843 3300048906 Bacteria 3216
202 Ga0496105_0001468 3300048908 Bacteria 16632
203 Ga0496107_0005023 3300048910 Bacteria 9012
204 Ga0496108_0002659 3300048911 Bacteria 14319
205 Ga0496111_0036764 3300048914 Bacteria 3502
206 Ga0496112_0022667 3300048915 Bacteria 5988
207 Ga0496113_0018087 3300048916 Bacteria 4904
208 Ga0496116_0004800 3300048919 Bacteria 12757
209 Ga0496116_0006788 3300048919 Bacteria 10297
210 Ga0496116_0054226 3300048919 Bacteria 2643
211 Ga0496116_0078459 3300048919 Bacteria 2059
212 Ga0496117_0000087 3300048920 Bacteria 211708
213 Ga0496117_0031038 3300048920 Bacteria 4087
214 Ga0496117_0058854 3300048920 Bacteria 2659
215 Ga0496118_0013371 3300048921 Bacteria 7769
216 Ga0496119_0001945 3300048922 Bacteria 23541
217 Ga0496119_0021942 3300048922 Bacteria 4591
218 Ga0496120_0000483 3300048923 Bacteria 62391
219 Ga0496122_0002723 3300048925 Bacteria 24522
220 Ga0496122_0010471 3300048925 Bacteria 9550
221 Ga0496122_0021764 3300048925 Bacteria 5724
222 Ga0496122_0066792 3300048925 Bacteria 2595
223 Ga0496122_0098841 3300048925 Bacteria 1958
224 Ga0496123_0072279 3300048926 Bacteria 2147
225 Ga0496125_0001704 3300048928 Bacteria 30635
226 Ga0496125_0009360 3300048928 Bacteria 10092
227 Ga0496126_0000078 3300048929 Bacteria 231046
228 Ga0496126_0000279 3300048929 Bacteria 107977
229 Ga0496126_0001837 3300048929 Bacteria 30975
230 Ga0496126_0027113 3300048929 Bacteria 5478
231 Ga0496126_0044727 3300048929 Bacteria 4075
232 Ga0496126_0091915 3300048929 Bacteria 2667
233 Ga0501032_0024594 3300049569 Bacteria 4156
234 Ga0501033_0012919 3300049570 Bacteria 6369
235 Ga0501036_0022674 3300049572 Bacteria 5284
236 Ga0501036_0023070 3300049572 Bacteria 5238
237 Ga0501037_0026312 3300049573 Bacteria 4299
238 Ga0501042_0015253 3300049578 Bacteria 5259
239 Ga0501043_0021111 3300049579 Bacteria 5105
240 Ga0501043_0188756 3300049579 Bacteria 1603
241 Ga0501046_0003364 3300049580 Bacteria 14692
242 Ga0501046_0017683 3300049580 Bacteria 5945
243 Ga0501048_0011062 3300049582 Bacteria 6728
244 Ga0501048_0019536 3300049582 Bacteria 4969
245 Ga0501073_0000050 3300049589 Bacteria 75004
246 Ga0501076_0072271 3300049592 Bacteria 2760
247 Ga0501076_0221270 3300049592 Bacteria 1547
248 Ga0501080_0048307 3300049742 Bacteria 3961
249 Ga0501035_0033934 3300049822 Bacteria 4638
250 Ga0501044_0053676 3300049823 Bacteria 4145
251 nmdc:mga05p37_134744_c1 3300050507 Bacteria 3030
252 nmdc:mga05p37_232686_c1 3300050507 Bacteria 2219
253 nmdc:mga05p37_23770_c1 3300050507 Bacteria 7442
254 nmdc:mga05p37_289613_c1 3300050507 Bacteria 1950
255 nmdc:mga05p37_36717_c1 3300050507 Bacteria 6009
256 nmdc:mga05p37_40989_c1 3300050507 Bacteria 5686
257 nmdc:mga05p37_469_c1 3300050507 Bacteria 43958
258 nmdc:mga09592_106249_c1 3300050508 Bacteria 2407
259 nmdc:mga09592_15393_c1 3300050508 Bacteria 6248
260 nmdc:mga09592_33161_c1 3300050508 Bacteria 4309
261 nmdc:mga06r32_247990_c1 3300050510 Bacteria 1768
262 nmdc:mga08y16_30813_c1 3300050511 Bacteria 5641
263 nmdc:mga0n895_96194_c1 3300050512 Bacteria 2966
264 Ga0495619_0122449 3300053085 Bacteria 1784
265 Ga0500555_000033 3300053103 Bacteria 85640
266 Ga0500616_0002117 3300053153 Bacteria 17241
267 Ga0500645_000010 3300053730 Bacteria 186517
268 Ga0501084_0083272 3300054114 Bacteria 2685
269 2511701599 2511231119 Bacteria 4019861
270 2540608804 2540341094 Bacteria 4061186
271 2545557677 2545555800 Bacteria 4222588
272 2550899168 2548877040 Bacteria 7507281
273 2555468751 2554235283 Bacteria 3683090
274 2556063535 2554235469 Bacteria 3590176
275 2563930031 2563366752 Bacteria 4961801
276 2571530732 2571042143 Bacteria 6986194
277 2578339357 2576861424 Bacteria 5270569
278 2578932066 2576861599 Bacteria 4217202
279 2601640085 2600255286 Bacteria 5390125
280 2621277829 2619619294 Bacteria 5575484
281 2631983218 2630968484 Bacteria 3876276
282 2643740604 2643221543 Bacteria 6628015
283 2644720516 2643221731 Bacteria 5623886
284 2644726399 2643221732 Bacteria 5756404
285 2644738461 2643221735 Bacteria 3676263
286 2651531197 2648501850 Bacteria 3975476
287 2673819839 2671180694 Bacteria 7506943
288 2674421463 2671180844 Bacteria 4164150
289 2686998887 2684623153 Bacteria 3878815
290 2687500189 2687453109 Bacteria 3860091
291 2695629553 2695420354 Bacteria 3922431
292 2712197327 2711768088 Bacteria 3195027
293 2717914742 2716884898 Bacteria 3928789
294 2723605985 2721755693 Bacteria 6126117
295 2728533720 2728368933 Bacteria 7044283
296 2730136649 2728369359 Bacteria 5621728
297 2745168091 2744054657 Bacteria 5016802
298 2753811401 2751185905 Bacteria 6142767
299 2802439734 2802428803 Bacteria 5806948
300 2808872391 2808606365 Bacteria 4301966
301 2809053949 2808606399 Bacteria 4021018
302 2812314082 2811994870 Bacteria 3776934
303 2817482198 2816332295 Bacteria 4352468
304 2817618013 2816332336 Bacteria 5207640
305 2819567430 2818991441 Bacteria 5062707
306 2819710985 2818991465 Bacteria 5388835
307 2819723093 2818991468 Bacteria 3723169
308 2821116508 2821111986 Bacteria 6894338
309 2823530127 2823526263 Bacteria 3765752
310 2842886456 2842882022 Bacteria 6158489
311 2857578302 2857576091 Bacteria 5465855
312 2857605979 2857604169 Bacteria 5111450
313 2860841627 2860837431 Bacteria 4202080
314 2864734576 2864733723 Bacteria 6770668
315 2877772482 2877768649 Bacteria 3957164
316 2880173333 2880169592 Bacteria 3900066
317 2881638934 2881636855 Bacteria 5205297
318 2885532244 2885526491 Bacteria 7164189
319 2889048383 2889042446 Bacteria 7618936
320 2889276536 2889276214 Bacteria 5979355
321 2897113606 2897109615 Bacteria 4009619
322 2904167758 2904162308 Bacteria 7086713
323 2904494641 2904490793 Bacteria 7046938
324 2904528869 2904524088 Bacteria 5887454
325 2904563196 2904560550 Bacteria 4029838
326 2904599780 2904595352 Bacteria 6124848
327 2907207113 2907202186 Bacteria 6632024
328 2908667360 2908665501 Bacteria 3678115
329 2919094624 2919093281 Bacteria 3660974
330 2919148499 2919143609 Bacteria 6219228
331 2919164224 2919160200 Bacteria 6929020
332 2919521732 2919517244 Bacteria 5858162
333 2919724861 2919720352 Bacteria 5986006
334 2919727182 2919726948 Bacteria 3696050
335 2928098155 2928093941 Bacteria 5965005
336 2929007596 2929004312 Bacteria 5678476
337 2929188436 2929183550 Bacteria 6377511
338 2931385497 2931384279 Bacteria 7299545
339 2936365637 2936361878 Bacteria 5632809
340 2938653100 2938649242 Bacteria 7118381
341 2939617779 2939615513 Bacteria 2384962
342 2939680328 2939679117 Bacteria 6921672
343 2939704891 2939702853 Bacteria 5139229
344 2945995862 2945991243 Bacteria 7008369
345 2946058570 2946053406 Bacteria 6978655
346 2954776460 2954773129 Bacteria 3741715
347 2960321438 2960319331 Bacteria 5502575
348 2960378335 2960375949 Bacteria 5361395
349 2962294866 2962290636 Bacteria 4072939
350 2968559752 2968558590 Bacteria 6956864
351 2969140781 2969136845 Bacteria 3923176
352 2969145065 2969141011 Bacteria 4118468
353 2969770107 2969765954 Bacteria 4216713
354 2969770741 2969770375 Bacteria 4271280
355 2971409763 2971403814 Bacteria 7370929
356 2971514043 2971511577 Bacteria 5404012
357 2971897187 2971893375 Bacteria 3929648
358 2980178742 2980176882 Bacteria 5397533
359 2980496630 2980492589 Bacteria 4072961
360 2988229478 2988225383 Bacteria 7221625
361 2996636840 2996632988 Bacteria 6921523
362 2996712066 2996706504 Bacteria 5757485
363 3001272467 3001272096 Bacteria 4729684
364 3006862629 3006858327 Bacteria 4317835
365 3006883322 3006879489 Bacteria 4064221
366 3006972923 3006969106 Bacteria 4739423
367 3006980598 3006978542 Bacteria 5328100
368 3006987831 3006984091 Bacteria 4207523
369 3006992287 3006988479 Bacteria 4767936
370 648171997 648028048 Bacteria 5394884
371 8007373204 8007371054 Bacteria 4849201
372 8022632702 8022630665 Bacteria 3886130
373 8022653088 8022653035 Bacteria 4035078
374 8022894486 8022893055 Bacteria 5300455
375 8022918402 8022914991 Bacteria 5584517
376 8022949797 8022948649 Bacteria 5366783
377 8051953901 8051952484 Bacteria 3926774
378 8052176035 8052174270 Bacteria 3881265
379 8054471929 8054465665 Bacteria 7323556
380 8054796205 8054795415 Bacteria 9785225
381 8055636183 8055632911 Bacteria 5283357
382 8057735589 8057733483 Bacteria 6578323
383 8057980930 8057977335 Bacteria 5694872
384 Ga0209025_1018806
385 SwRhRL2b_contig_890794
386 JGI25151J46595_10000054
387 rootL2_10013117
388 rootH1_10114854
389 Ga0006562J51391_1000506
390 Ga0006562J51391_1005606
391 Ga0055532_1000052
392 Ga0055528_1009235
393 Ga0065704_10000250
394 Ga0065704_10113028
395 Ga0065712_10098846
396 Ga0065707_10000561
397 Ga0065707_10101547
398 Ga0065707_10105556
399 Ga0070670_100016703
400 Ga0070689_100009119
401 Ga0070669_100053844
402 Ga0070707_100023754
403 Ga0070698_100138071
404 Ga0070699_100011441
405 Ga0070699_100013056
406 Ga0068857_100107742
407 Ga0068859_100017911
408 Ga0068859_100295590
409 Ga0068866_10095834
410 Ga0068862_100098225
411 Ga0075428_100070567
412 Ga0075429_100009263
413 Ga0097620_100017911
414 Ga0097620_100295584
415 Ga0079104_1000084
416 Ga0105244_10014118
417 Ga0111539_10149945
418 Ga0105245_10108476
419 Ga0105247_10022749
420 Ga0114129_10000238
421 Ga0114129_10012935
422 Ga0114129_10036015
423 Ga0114129_10044995
424 Ga0114129_10133323
425 Ga0114129_10341433
426 Ga0114129_10543986
427 Ga0105243_10033254
428 Ga0105243_10039162
429 Ga0105242_10020020
430 Ga0105242_10110962
431 Ga0105238_10075232
432 Ga0105239_10065449
433 Ga0105246_10001972
434 Ga0105246_10064766
435 Ga0105246_10107734
436 Ga0157378_10009585
437 Ga0157375_10078531
438 Ga0157376_10006446
439 Ga0209784_100474
440 Ga0209566_100153
441 Ga0209147_100028
442 Ga0209147_100396
443 Ga0209437_100604
444 Ga0209258_103850
445 Ga0209025_1000011
446 Ga0209025_1000095
447 Ga0209025_1000403
448 Ga0209025_1001171
449 Ga0209025_1017144
450 Ga0207426_1005042
451 Ga0207696_1014484
452 Ga0207713_1007136
453 Ga0207642_10076928
454 Ga0207710_10076347
455 Ga0207646_10020822
456 Ga0207664_10097916
457 Ga0207670_10016366
458 Ga0207668_10175313
459 Ga0209281_1000154
460 Ga0209371_1001621
461 Ga0209968_1004049
462 Ga0207428_10088960
463 Ga0268265_10104922
464 Ga0265326_10020097
465 Ga0265318_10017223
466 Ga0265338_10112723
467 Ga0268256_1001408
468 Ga0265340_10008273
469 Ga0307408_100074104
470 Ga0316575_10008004
471 Ga0316579_10048444
472 Ga0316576_10003371
473 Ga0316576_10003457
474 Ga0316576_10004243
475 Ga0316576_10007687
476 Ga0316576_10012344
477 Ga0316576_10012949
478 Ga0316576_10013681
479 Ga0316576_10143026
480 Ga0316576_10152656
481 Ga0316578_10001382
482 Ga0316578_10002571
483 Ga0316578_10046973
484 Ga0316578_10063334
485 Ga0316578_10106162
486 Ga0316577_10004383
487 Ga0316577_10011180
488 Ga0316577_10021126
489 Ga0316577_10026241
490 Ga0307413_10101541
491 Ga0307410_10000820
492 Ga0307407_10002471
493 Ga0307416_100004339
494 Ga0307416_100070372
495 Ga0316583_10000919
496 Ga0316580_10000667
497 Ga0316593_10024044
498 Ga0316593_10044420
499 Ga0316588_1007356
500 Ga0316596_1001098
501 Ga0316596_1002960
502 Ga0316596_1008443
503 Ga0316574_0003398
504 Ga0316574_0020106
505 Ga0316574_0044187
506 Ga0316574_0050359
507 Ga0373931_0112632
508 Ga0316582_0002236
509 Ga0316582_0027806
510 Ga0316582_0050752
511 Ga0316582_0056842
512 Ga0316582_0069051
513 Ga0316582_0099489
514 Ga0316582_0126643
515 Ga0316584_0003218
516 Ga0316584_0004946
517 Ga0316584_0009861
518 Ga0316584_0023588
519 Ga0316584_0029382
520 Ga0316584_0070309
521 Ga0316584_0077648
522 Ga0316584_0091471
523 Ga0395900_0083125
524 Ga0395900_0183377
525 Ga0395898_0062181
526 Ga0395905_0134134
527 Ga0316581_0017175
528 Ga0395901_0062265
529 Ga0395901_0074843
530 Ga0451577_0002977
531 Ga0451577_0012922
532 Ga0451577_0041179
533 Ga0451577_0103617
534 Ga0453683_0001192
535 Ga0453683_0010843
536 Ga0453683_0031308
537 Ga0453683_0060401
538 Ga0466961_0003396
539 Ga0453684_0000007
540 Ga0453684_0000505
541 Ga0453684_0000599
542 Ga0453684_0000701
543 Ga0453684_0000881
544 Ga0453684_0001353
545 Ga0453684_0001413
546 Ga0453684_0004398
547 Ga0453684_0004553
548 Ga0453684_0010131
549 Ga0453684_0016113
550 Ga0453684_0016814
551 Ga0453684_0032511
552 Ga0453684_0038836
553 Ga0453684_0041428
554 Ga0453684_0052503
555 Ga0453684_0065613
556 Ga0453684_0076941
557 Ga0453684_0116455
558 Ga0453684_0126048
559 Ga0453684_0160839
560 Ga0453684_0173143
561 Ga0453684_0251792
562 Ga0453684_0396608
563 Ga0453684_0405935
564 Ga0466970_0064321
565 Ga0466957_0055548
566 Ga0466959_0159824
567 Ga0451576_0009124
568 Ga0451576_0016915
569 Ga0451576_0021503
570 Ga0451576_0025909
571 Ga0451576_0031103
572 Ga0451576_0115663
573 Ga0466958_0007279
574 Ga0495650_0000555
575 Ga0495607_0000044
576 Ga0495620_0010620
577 Ga0495631_0057347
578 Ga0495633_0060494
579 Ga0495660_0001944
580 Ga0495672_0015389
581 Ga0495676_0109011
582 Ga0496101_0128176
583 Ga0496102_0012959
584 Ga0496103_0031843
585 Ga0496105_0001468
586 Ga0496107_0005023
587 Ga0496108_0002659
588 Ga0496111_0036764
589 Ga0496112_0022667
590 Ga0496113_0018087
591 Ga0496116_0004800
592 Ga0496116_0006788
593 Ga0496116_0054226
594 Ga0496116_0078459
595 Ga0496117_0000087
596 Ga0496117_0031038
597 Ga0496117_0058854
598 Ga0496118_0013371
599 Ga0496119_0001945
600 Ga0496119_0021942
601 Ga0496120_0000483
602 Ga0496122_0002723
603 Ga0496122_0010471
604 Ga0496122_0021764
605 Ga0496122_0066792
606 Ga0496122_0098841
607 Ga0496123_0072279
608 Ga0496125_0001704
609 Ga0496125_0009360
610 Ga0496126_0000078
611 Ga0496126_0000279
612 Ga0496126_0001837
613 Ga0496126_0027113
614 Ga0496126_0044727
615 Ga0496126_0091915
616 Ga0501032_0024594
617 Ga0501033_0012919
618 Ga0501036_0022674
619 Ga0501036_0023070
620 Ga0501037_0026312
621 Ga0501042_0015253
622 Ga0501043_0021111
623 Ga0501043_0188756
624 Ga0501046_0003364
625 Ga0501046_0017683
626 Ga0501048_0011062
627 Ga0501048_0019536
628 Ga0501073_0000050
629 Ga0501076_0072271
630 Ga0501076_0221270
631 Ga0501080_0048307
632 Ga0501035_0033934
633 Ga0501044_0053676
634 nmdc:mga05p37_134744_c1
635 nmdc:mga05p37_232686_c1
636 nmdc:mga05p37_23770_c1
637 nmdc:mga05p37_289613_c1
638 nmdc:mga05p37_36717_c1
639 nmdc:mga05p37_40989_c1
640 nmdc:mga05p37_469_c1
641 nmdc:mga09592_106249_c1
642 nmdc:mga09592_15393_c1
643 nmdc:mga09592_33161_c1
644 nmdc:mga06r32_247990_c1
645 nmdc:mga08y16_30813_c1
646 nmdc:mga0n895_96194_c1
647 Ga0495619_0122449
648 Ga0500555_000033
649 Ga0500616_0002117
650 Ga0500645_000010
651 Ga0501084_0083272
652 2511701599
653 2540608804
654 2545557677
655 2550899168
656 2555468751
657 2556063535
658 2563930031
659 2571530732
660 2578339357
661 2578932066
662 2601640085
663 2621277829
664 2631983218
665 2643740604
666 2644720516
667 2644726399
668 2644738461
669 2651531197
670 2673819839
671 2674421463
672 2686998887
673 2687500189
674 2695629553
675 2712197327
676 2717914742
677 2723605985
678 2728533720
679 2730136649
680 2745168091
681 2753811401
682 2802439734
683 2808872391
684 2809053949
685 2812314082
686 2817482198
687 2817618013
688 2819567430
689 2819710985
690 2819723093
691 2821116508
692 2823530127
693 2842886456
694 2857578302
695 2857605979
696 2860841627
697 2864734576
698 2877772482
699 2880173333
700 2881638934
701 2885532244
702 2889048383
703 2889276536
704 2897113606
705 2904167758
706 2904494641
707 2904528869
708 2904563196
709 2904599780
710 2907207113
711 2908667360
712 2919094624
713 2919148499
714 2919164224
715 2919521732
716 2919724861
717 2919727182
718 2928098155
719 2929007596
720 2929188436
721 2931385497
722 2936365637
723 2938653100
724 2939617779
725 2939680328
726 2939704891
727 2945995862
728 2946058570
729 2954776460
730 2960321438
731 2960378335
732 2962294866
733 2968559752
734 2969140781
735 2969145065
736 2969770107
737 2969770741
738 2971409763
739 2971514043
740 2971897187
741 2980178742
742 2980496630
743 2988229478
744 2996636840
745 2996712066
746 3001272467
747 3006862629
748 3006883322
749 3006972923
750 3006980598
751 3006987831
752 3006992287
753 648171997
754 8007373204
755 8022632702
756 8022653088
757 8022894486
758 8022918402
759 8022949797
760 8051953901
761 8052176035
762 8054471929
763 8054796205
764 8055636183
765 8057735589
766 8057980930

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01654

Cyt_bd_oxida_I

Cytochrome bd terminal oxidase subunit I

71

508

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
7nkz-assembly1.cif.gz_A cryo-em structure of the cytochrome bd oxidase from m. tuberculosis at 2.5 a resolution 0.9559 1 439
7ose-assembly1.cif.gz_D cytochrome bd-ii type oxidase with bound aurachin d 0.9559 1 441
7nkz-assembly1.cif.gz_A cryo-em structure of the cytochrome bd oxidase from m. tuberculosis at 2.5 a resolution 0.9211 1 439
5ir6-assembly1.cif.gz_A the structure of bd oxidase from geobacillus thermodenitrificans 0.9194 2 439
5ir6-assembly1.cif.gz_A the structure of bd oxidase from geobacillus thermodenitrificans 0.9092 2 439
ID Description Score Start End Superfamily
af_Q9LUF8_14_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4049 7 235 1.20.1250.20
af_Q4CY86_9_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4013 8 236 1.20.1250.20
af_E9AHJ0_13_227_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3974 7 234 1.20.1250.20
af_Q4CY86_9_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3905 8 236 1.20.1250.20
af_Q4D3I2_10_174_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3901 17 154 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A3N5SJN3-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9865 1 249 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A4Q4CNX2-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9863 1 182 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A1V3XDE8-F1-model_v4 Bacterial Cytochrome Ubiquinol Oxidase family protein 0.9861 1 209 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A836RLP3-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9859 1 198 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A538KYP3-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9859 1 226 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069

Map