F429269

General Info

Members Datasets Scaffolds Average Seq Length
382 228 325 304

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10020574|Ga0157372_100205742
Length 342
Sequence LVSFSTASVAALNLAHPLDDPMPVKPTAALSRSDLADLNAFRMVERLRSFTKAAVELGITTSALSHAIRNLETRLGVRLLNRTSRTVAPTEAGASLARRLNVGFQEIGDALDEVNRLRDRPAGRLRLNVLSDGARLIVGRYLPKFLSKYPEVEVEVCVDDRMVDIVAEGFDAGIRFGGTVPEDLVAVKLGADLKWVAVAAPRYLYHRPPLLEPEDLRAHSCIRMRTGQGVIYKWEFRQGNDYRVIDVPGQICVSETTLALELALAGTGIAYCLEDRVKEPLLNGALHVVLPDWSPVEPALCLYYPGHRRVPQGLRELIALLREEIAAEARRAPRQMTSGAVA

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
3 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
4 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
5 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
6 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
7 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
8 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
9 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
10 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
11 2643221571 Pseudomonas sp. Root569 Isolate Unclassified
12 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
13 2791355196 Bradyrhizobium sp. Y36 Isolate Nodule
14 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
15 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
16 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
17 2826581358 Pseudomonas viridiflava CDRTc14 Isolate Unclassified
18 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
19 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
20 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
21 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
22 2842815866 Pseudomonas sp. R-72210 Isolate Unclassified
23 2842849001 Pseudomonas sp. R-72008 Isolate Unclassified
24 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
25 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
26 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
27 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
28 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
29 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
30 2928070936 Variovorax gossypii 1167 Isolate Unclassified
31 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
32 2929144301 Pseudomonas sp. R-71838 Hybrid assembly Isolate Unclassified
33 2929189879 Pseudomonas sp. R-71842 Hybrid assembly Isolate Unclassified
34 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
35 2932828146 Bradyrhizobium sp. S3.9.2 Isolate Nodule
36 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
37 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
38 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
39 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
40 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
41 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
42 2945961074 Pseudomonas sp. W2I6 Isolate Rhizosphere
43 2969304461 Pseudomonas sp. R84 Isolate Rhizosphere
44 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
45 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
46 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
47 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
48 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
49 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
50 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
51 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
52 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
53 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
54 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
55 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
56 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
57 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
58 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
59 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
60 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
61 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
62 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
63 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
64 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
65 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
66 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
67 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
68 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
69 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
70 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
71 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
72 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
73 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
74 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
75 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
76 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
77 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
78 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
79 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
80 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
81 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
82 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
83 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
84 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
85 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
86 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
87 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
88 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
89 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
90 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
91 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
92 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
93 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
94 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
95 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
96 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
98 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
118 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
122 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
123 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
124 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
125 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
126 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
127 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
128 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
129 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
130 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
131 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
132 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
133 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
134 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
135 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
136 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
137 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
138 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
139 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
140 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
141 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
142 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
143 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
144 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
145 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
146 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
147 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
148 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
149 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
150 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
151 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
152 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
153 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
154 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
155 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
156 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
157 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
158 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
159 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
160 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
161 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
162 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
163 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
164 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
165 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
166 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
167 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
168 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
169 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
170 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
171 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
172 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
173 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
174 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
175 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
176 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
177 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
178 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
179 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
180 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
181 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
182 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
183 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
184 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
185 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
186 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
187 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
188 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
189 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
190 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
191 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
192 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
193 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
194 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
195 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
196 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
197 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
198 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
199 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
200 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
201 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
202 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
203 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
204 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
205 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
206 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
207 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
208 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
209 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
210 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
211 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
212 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
213 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
214 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
215 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
216 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
217 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
218 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
219 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
220 8017057580 Bradyrhizobium sp. S3.7.6 Isolate Nodule
221 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
222 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
223 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule
224 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
225 8055097453 Leclercia tamurae H6W5 Isolate Rhizosphere
226 8056177738 Pseudomonas azerbaijanoccidentalis SWRI74 Isolate Rhizosphere
227 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere
228 8057160832 Larsenimonas rhizosphaerae GH2-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.34
Metatranscriptomes 0
Isolates 14.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.33
Nodule 7.07
Rhizoplane 1.57
Rhizosphere 67.54
Stem 0
Stem Tuber 0
Unclassified 16.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_5790239 2162886011 Bacteria 5906
2 rootH2_10283102 3300003320 Bacteria 1279
3 Ga0055526_1023142 3300003771 Bacteria 2084
4 Ga0055530_10005994 3300003791 Bacteria 5581
5 Ga0058692_1012357 3300003856 Bacteria 2024
6 Ga0065712_10067802 3300005290 Bacteria 31985
7 Ga0070658_10170979 3300005327 Unclassified 1825
8 Ga0070676_10109565 3300005328 Bacteria 1718
9 Ga0070680_100157221 3300005336 Bacteria 1910
10 Ga0070680_100413539 3300005336 Bacteria 1150
11 Ga0068868_100548745 3300005338 Bacteria 1018
12 Ga0070660_100296195 3300005339 Bacteria 1326
13 Ga0070661_100059191 3300005344 Bacteria 2808
14 Ga0070661_100161328 3300005344 Bacteria 1698
15 Ga0070671_100052694 3300005355 Bacteria 3383
16 Ga0070671_100598929 3300005355 Unclassified 952
17 Ga0070659_100005133 3300005366 Bacteria 9392
18 Ga0070659_100067346 3300005366 Plasmid 2840
19 Ga0068853_100006263 3300005539 Bacteria 9431
20 Ga0070665_100003121 3300005548 Bacteria 17848
21 Ga0068854_100486669 3300005578 Bacteria 1037
22 Ga0068864_100143518 3300005618 Bacteria 2156
23 Ga0068863_100188562 3300005841 Bacteria 1981
24 Ga0081455_10000010 3300005937 Bacteria 248212
25 Ga0081455_10000391 3300005937 Bacteria 57931
26 Ga0081538_10057638 3300005981 Bacteria 2260
27 Ga0081540_1038714 3300005983 Bacteria 2510
28 Ga0081539_10000045 3300005985 Bacteria 277027
29 Ga0075432_10011990 3300006058 Bacteria 2946
30 Ga0075362_10013026 3300006177 Bacteria 3318
31 Ga0075367_10051745 3300006178 Bacteria 2429
32 Ga0075366_10007706 3300006195 Bacteria 5963
33 Ga0097620_100130002 3300006931 Bacteria 2589
34 Ga0079104_1000049 3300006946 Bacteria 177499
35 Ga0079104_1028415 3300006946 Bacteria 1421
36 Ga0105251_10000005 3300009011 Bacteria 259226
37 Ga0105251_10000015 3300009011 Bacteria 149012
38 Ga0105251_10002218 3300009011 Bacteria 15495
39 Ga0105251_10002917 3300009011 Bacteria 12848
40 Ga0105251_10005810 3300009011 Bacteria 7995
41 Ga0105244_10021164 3300009036 Bacteria 3601
42 Ga0105244_10048002 3300009036 Bacteria 2187
43 Ga0105250_10000094 3300009092 Bacteria 79652
44 Ga0105250_10000509 3300009092 Bacteria 27263
45 Ga0105250_10001280 3300009092 Bacteria 13801
46 Ga0105250_10003185 3300009092 Bacteria 7852
47 Ga0105240_10001449 3300009093 Bacteria 40535
48 Ga0105240_10047145 3300009093 Bacteria 5455
49 Ga0105241_10119383 3300009174 Bacteria 2121
50 Ga0105237_10000882 3300009545 Bacteria 40534
51 Ga0105238_10007420 3300009551 Bacteria 10984
52 Ga0105239_10003438 3300010375 Bacteria 19385
53 Ga0105239_10066203 3300010375 Bacteria 3969
54 Ga0157373_10000822 3300013100 Bacteria 24068
55 Ga0157373_10016299 3300013100 Bacteria 5421
56 Ga0157373_10080582 3300013100 Bacteria 2295
57 Ga0157371_10001479 3300013102 Bacteria 24313
58 Ga0157371_10070127 3300013102 Bacteria 2482
59 Ga0163162_10004160 3300013306 Bacteria 13893
60 Ga0157372_10003399 3300013307 Bacteria 17177
61 Ga0157372_10020574 3300013307 Bacteria 7121
62 Ga0157380_10166490 3300014326 Unclassified 1921
63 Ga0182008_10004789 3300014497 Bacteria 7826
64 Ga0183366_1001 3300015679 Bacteria 2743932
65 Ga0183370_1001 3300015680 Bacteria 2743932
66 Ga0183369_1001 3300015685 Bacteria 2743932
67 Ga0183368_1001 3300015687 Bacteria 2743932
68 Ga0163161_10080705 3300017792 Bacteria 2394
69 Ga0163161_10099224 3300017792 Bacteria 2165
70 Ga0163161_10108316 3300017792 Bacteria 2074
71 Ga0214544_1000030 3300021320 Bacteria 153107
72 Ga0214542_1000026 3300021321 Bacteria 182145
73 Ga0214545_1000015 3300021324 Bacteria 182143
74 Ga0214543_1000036 3300021327 Bacteria 182143
75 Ga0209563_100392 3300025230 Bacteria 15697
76 Ga0209759_1001891 3300025256 Bacteria 10312
77 Ga0209676_1006215 3300025292 Bacteria 5966
78 Ga0209564_1001409 3300025295 Bacteria 24843
79 Ga0209050_1000148 3300025298 Bacteria 164093
80 Ga0209050_1000402 3300025298 Bacteria 80873
81 Ga0209050_1001074 3300025298 Bacteria 33523
82 Ga0207696_1000201 3300025711 Bacteria 91444
83 Ga0207696_1000410 3300025711 Bacteria 39989
84 Ga0207696_1001110 3300025711 Bacteria 15677
85 Ga0207696_1001899 3300025711 Bacteria 10658
86 Ga0207655_1009622 3300025728 Bacteria 5982
87 Ga0207655_1070930 3300025728 Bacteria 1295
88 Ga0207713_1000003 3300025735 Bacteria 860698
89 Ga0207713_1000036 3300025735 Bacteria 259717
90 Ga0207713_1008893 3300025735 Bacteria 5719
91 Ga0207713_1012728 3300025735 Bacteria 4477
92 Ga0207680_10324444 3300025903 Unclassified 1077
93 Ga0207645_10065677 3300025907 Bacteria 2319
94 Ga0207695_10025702 3300025913 Bacteria 6586
95 Ga0207695_10039602 3300025913 Bacteria 5064
96 Ga0207671_10022478 3300025914 Bacteria 4768
97 Ga0207657_10038714 3300025919 Bacteria 4242
98 Ga0207649_10443622 3300025920 Bacteria 978
99 Ga0207694_10004425 3300025924 Bacteria 10984
100 Ga0207644_10028435 3300025931 Bacteria 3870
101 Ga0207706_10038920 3300025933 Bacteria 4217
102 Ga0207640_10148760 3300025981 Unclassified 1718
103 Ga0207639_10038364 3300026041 Bacteria 3563
104 Ga0207678_10015580 3300026067 Bacteria 6684
105 Ga0207641_10456283 3300026088 Bacteria 1236
106 Ga0209281_1000012 3300027111 Bacteria 684886
107 Ga0209371_1007810 3300027312 Bacteria 3654
108 Ga0207428_10020290 3300027907 Bacteria 5647
109 Ga0268266_10039539 3300028379 Bacteria 4018
110 Ga0307515_10001079 3300028794 Bacteria 62391
111 Ga0268256_1008074 3300030500 Bacteria 3654
112 Ga0316183_1028073 3300030742 Bacteria 2439
113 Ga0307513_10010407 3300031456 Bacteria 11662
114 Ga0307513_10190988 3300031456 Bacteria 1900
115 Ga0307412_10142992 3300031911 Bacteria 1755
116 Ga0307414_10166603 3300032004 Bacteria 1757
117 Ga0307411_10207391 3300032005 Bacteria 1510
118 Ga0395899_0002516 3300037312 Bacteria 14851
119 Ga0395899_0050090 3300037312 Bacteria 3102
120 Ga0395899_0061712 3300037312 Bacteria 2761
121 Ga0395900_0000006 3300037418 Bacteria 495364
122 Ga0395900_0062092 3300037418 Bacteria 3841
123 Ga0395898_0045183 3300037466 Bacteria 4330
124 Ga0395905_0002508 3300037471 Bacteria 20281
125 Ga0395905_0011368 3300037471 Bacteria 8606
126 Ga0395905_0075639 3300037471 Bacteria 3156
127 Ga0395905_0176079 3300037471 Bacteria 2008
128 Ga0395901_0000001 3300038443 Bacteria 800383
129 Ga0395901_0009583 3300038443 Bacteria 9827
130 Ga0395901_0252018 3300038443 Bacteria 1839
131 Ga0395901_0288090 3300038443 Bacteria 1705
132 Ga0439438_000022 3300041405 Bacteria 108022
133 Ga0439438_015719 3300041405 Bacteria 2217
134 Ga0439447_000431 3300041407 Bacteria 15620
135 Ga0439447_037325 3300041407 Bacteria 1198
136 Ga0451833_0965251 3300041491 Bacteria 1012
137 Ga0451845_0377352 3300041501 Bacteria 1215
138 Ga0439431_0000001 3300041997 Bacteria 82760
139 Ga0439432_000005 3300042006 Bacteria 103122
140 Ga0439432_000026 3300042006 Bacteria 50283
141 Ga0439432_000983 3300042006 Bacteria 10778
142 Ga0439432_005367 3300042006 Bacteria 4617
143 Ga0450911_000060 3300042115 Bacteria 44515
144 Ga0450911_000994 3300042115 Bacteria 7352
145 Ga0450902_001132 3300042137 Bacteria 3559
146 Ga0466966_0286957 3300044684 Unclassified 989
147 Ga0466957_0224590 3300044842 Bacteria 1241
148 Ga0466959_0033512 3300045049 Bacteria 3798
149 Ga0466958_0341305 3300045836 Bacteria 964
150 Ga0495627_001472 3300046453 Bacteria 13699
151 Ga0495627_001970 3300046453 Bacteria 10609
152 Ga0495627_029689 3300046453 Bacteria 1738
153 Ga0495627_038116 3300046453 Bacteria 1488
154 Ga0495590_0018695 3300046457 Bacteria 2480
155 Ga0495591_000199 3300046458 Bacteria 61532
156 Ga0495591_002249 3300046458 Bacteria 10999
157 Ga0495591_007584 3300046458 Bacteria 4586
158 Ga0495591_026188 3300046458 Bacteria 1817
159 Ga0495638_0000667 3300046460 Bacteria 37379
160 Ga0495638_0007727 3300046460 Bacteria 7683
161 Ga0495638_0051645 3300046460 Bacteria 2564
162 Ga0495650_0000507 3300046471 Bacteria 58153
163 Ga0495650_0003851 3300046471 Bacteria 10640
164 Ga0495605_0000001 3300046474 Bacteria 614538
165 Ga0495605_0000007 3300046474 Bacteria 358289
166 Ga0495584_0000869 3300046491 Bacteria 19502
167 Ga0495585_0000120 3300046492 Bacteria 85123
168 Ga0495594_0023093 3300046499 Bacteria 3330
169 Ga0495596_0000638 3300046500 Bacteria 22052
170 Ga0495596_0009227 3300046500 Bacteria 4350
171 Ga0495607_0000824 3300046501 Bacteria 29334
172 Ga0495607_0011555 3300046501 Bacteria 5871
173 Ga0495607_0029850 3300046501 Bacteria 3354
174 Ga0495607_0084943 3300046501 Bacteria 1730
175 Ga0495607_0112324 3300046501 Bacteria 1442
176 Ga0495583_0000007 3300046506 Bacteria 434661
177 Ga0495583_0004618 3300046506 Bacteria 9735
178 Ga0495606_0015764 3300046507 Bacteria 5804
179 Ga0495606_0019229 3300046507 Bacteria 5091
180 Ga0495610_0000044 3300046512 Bacteria 156847
181 Ga0495610_0000063 3300046512 Bacteria 127282
182 Ga0495610_0003127 3300046512 Bacteria 13165
183 Ga0495610_0007821 3300046512 Bacteria 7042
184 Ga0495610_0008731 3300046512 Bacteria 6511
185 Ga0495610_0012083 3300046512 Bacteria 5221
186 Ga0495616_0054387 3300046513 Bacteria 1986
187 Ga0495616_0082272 3300046513 Bacteria 1538
188 Ga0495620_0000110 3300046515 Bacteria 65755
189 Ga0495620_0065298 3300046515 Bacteria 1502
190 Ga0495631_0001880 3300046518 Bacteria 12388
191 Ga0495631_0013960 3300046518 Bacteria 3885
192 Ga0495632_0005178 3300046519 Bacteria 8702
193 Ga0495632_0018157 3300046519 Bacteria 3865
194 Ga0495632_0018554 3300046519 Bacteria 3816
195 Ga0495632_0023116 3300046519 Bacteria 3323
196 Ga0495632_0029192 3300046519 Bacteria 2874
197 Ga0495643_0000089 3300046522 Bacteria 154903
198 Ga0495643_0003452 3300046522 Bacteria 11557
199 Ga0495643_0003968 3300046522 Bacteria 10578
200 Ga0495643_0006298 3300046522 Bacteria 7850
201 Ga0495643_0012408 3300046522 Bacteria 5141
202 Ga0495643_0013985 3300046522 Bacteria 4784
203 Ga0495643_0015374 3300046522 Bacteria 4524
204 Ga0495643_0099002 3300046522 Bacteria 1496
205 Ga0495643_0099807 3300046522 Bacteria 1489
206 Ga0495648_0000516 3300046524 Bacteria 41670
207 Ga0495648_0000764 3300046524 Bacteria 34344
208 Ga0495648_0000865 3300046524 Bacteria 31943
209 Ga0495648_0001957 3300046524 Bacteria 19602
210 Ga0495648_0071687 3300046524 Bacteria 2007
211 Ga0495648_0112901 3300046524 Bacteria 1475
212 Ga0495648_0188057 3300046524 Bacteria 1044
213 Ga0495652_0105930 3300046529 Bacteria 2271
214 Ga0495654_0016471 3300046530 Bacteria 3907
215 Ga0495654_0056909 3300046530 Bacteria 1889
216 Ga0495609_0000004 3300046538 Bacteria 697346
217 Ga0495609_0005517 3300046538 Bacteria 6616
218 Ga0495597_0000968 3300046542 Bacteria 22204
219 Ga0495597_0001390 3300046542 Bacteria 17470
220 Ga0495597_0019040 3300046542 Bacteria 3216
221 Ga0495597_0107032 3300046542 Bacteria 1175
222 Ga0495645_0055744 3300046543 Bacteria 2870
223 Ga0495633_0000020 3300046558 Bacteria 227180
224 Ga0495633_0106391 3300046558 Bacteria 1301
225 Ga0495668_0026347 3300046616 Bacteria 3299
226 Ga0495668_0186431 3300046616 Bacteria 1136
227 Ga0495668_0234345 3300046616 Bacteria 1005
228 Ga0495611_0001229 3300046648 Bacteria 13229
229 Ga0495611_0012881 3300046648 Bacteria 3554
230 Ga0495625_0015807 3300046660 Bacteria 5958
231 Ga0495661_0000009 3300046665 Bacteria 291327
232 Ga0495661_0009435 3300046665 Bacteria 6699
233 Ga0495624_0106727 3300046690 Bacteria 1723
234 Ga0495670_0025376 3300046691 Bacteria 2931
235 Ga0495670_0030029 3300046691 Bacteria 2700
236 Ga0495671_0000340 3300046692 Bacteria 38932
237 Ga0495671_0007803 3300046692 Bacteria 6058
238 Ga0495671_0089145 3300046692 Bacteria 1510
239 Ga0495589_0001743 3300046794 Bacteria 12369
240 Ga0495660_0001637 3300046810 Bacteria 15041
241 Ga0495660_0022438 3300046810 Bacteria 3605
242 Ga0495672_0064676 3300047320 Bacteria 2093
243 Ga0495672_0150158 3300047320 Bacteria 1209
244 Ga0495680_0184445 3300047322 Unclassified 1504
245 Ga0495683_0000003 3300047323 Bacteria 383992
246 Ga0495683_0002829 3300047323 Bacteria 10285
247 Ga0495687_002151 3300047443 Bacteria 16448
248 Ga0495687_072052 3300047443 Bacteria 1382
249 Ga0495679_000122 3300047446 Bacteria 68748
250 Ga0495673_0000505 3300047469 Bacteria 41350
251 Ga0495673_0000804 3300047469 Bacteria 29468
252 Ga0495681_0000014 3300047470 Bacteria 184395
253 Ga0495681_0000584 3300047470 Bacteria 27836
254 Ga0495681_0000891 3300047470 Bacteria 23066
255 Ga0495681_0005701 3300047470 Bacteria 8288
256 Ga0495681_0045261 3300047470 Bacteria 2107
257 Ga0495686_0002385 3300047472 Bacteria 17845
258 Ga0495686_0003542 3300047472 Bacteria 13445
259 Ga0495686_0005803 3300047472 Bacteria 9626
260 Ga0495686_0007516 3300047472 Bacteria 8161
261 Ga0495686_0037884 3300047472 Bacteria 3087
262 Ga0495615_0000056 3300048090 Bacteria 35338
263 Ga0495615_0001025 3300048090 Bacteria 3980
264 Ga0495626_0000779 3300048091 Bacteria 29028
265 Ga0495626_0002037 3300048091 Bacteria 14797
266 Ga0495626_0044706 3300048091 Bacteria 2071
267 Ga0496110_0021581 3300048913 Bacteria 5456
268 Ga0496110_0039237 3300048913 Bacteria 4123
269 Ga0496112_0311695 3300048915 Bacteria 1518
270 Ga0496116_0000060 3300048919 Bacteria 272219
271 Ga0496116_0000556 3300048919 Bacteria 50008
272 Ga0496116_0004613 3300048919 Bacteria 13063
273 Ga0496117_0004809 3300048920 Bacteria 14638
274 Ga0496117_0012458 3300048920 Bacteria 7488
275 Ga0496117_0326828 3300048920 Bacteria 801
276 Ga0496118_0006430 3300048921 Bacteria 12915
277 Ga0496118_0015426 3300048921 Bacteria 7070
278 Ga0496119_0001048 3300048922 Bacteria 35361
279 Ga0496120_0000114 3300048923 Bacteria 136671
280 Ga0496121_0000190 3300048924 Bacteria 136607
281 Ga0496121_0000538 3300048924 Bacteria 72143
282 Ga0496121_0002392 3300048924 Bacteria 28763
283 Ga0496121_0003747 3300048924 Bacteria 21297
284 Ga0496121_0009986 3300048924 Bacteria 10793
285 Ga0496121_0040215 3300048924 Bacteria 4105
286 Ga0496122_0011692 3300048925 Bacteria 8847
287 Ga0496122_0037380 3300048925 Bacteria 3909
288 Ga0496122_0054011 3300048925 Bacteria 3022
289 Ga0496123_0001983 3300048926 Bacteria 26520
290 Ga0496123_0002882 3300048926 Bacteria 20181
291 Ga0496124_0000176 3300048927 Bacteria 128635
292 Ga0496124_0003193 3300048927 Bacteria 20246
293 Ga0496124_0003306 3300048927 Bacteria 19875
294 Ga0496124_0004514 3300048927 Bacteria 16223
295 Ga0496124_0004785 3300048927 Bacteria 15586
296 Ga0496124_0007443 3300048927 Bacteria 11632
297 Ga0496124_0007929 3300048927 Bacteria 11180
298 Ga0496125_0003049 3300048928 Bacteria 20945
299 Ga0496125_0046389 3300048928 Bacteria 3646
300 Ga0496126_0001199 3300048929 Bacteria 42278
301 Ga0496126_0001769 3300048929 Bacteria 31972
302 Ga0496126_0003079 3300048929 Bacteria 21570
303 Ga0496126_0473434 3300048929 Bacteria 1005
304 Ga0495678_000007 3300049459 Bacteria 448039
305 Ga0495678_000219 3300049459 Bacteria 66288
306 Ga0495678_003226 3300049459 Bacteria 10224
307 Ga0501039_0465267 3300049575 Bacteria 993
308 Ga0501044_0007121 3300049823 Bacteria 12300
309 nmdc:mga03n38_23693_c1 3300050490 Bacteria 2501
310 nmdc:mga0k408_6600_c1 3300050493 Bacteria 6183
311 Ga0500643_004932 3300053087 Bacteria 5874
312 Ga0500643_006674 3300053087 Bacteria 4781
313 Ga0500643_018085 3300053087 Bacteria 2347
314 Ga0500650_0000054 3300053098 Bacteria 37455
315 Ga0500554_010902 3300053102 Bacteria 2233
316 Ga0500562_051030 3300053108 Unclassified 1106
317 Ga0500594_0005866 3300053118 Bacteria 2736
318 Ga0500658_0009013 3300053134 Bacteria 3682
319 Ga0500568_0002454 3300053139 Bacteria 10903
320 Ga0500604_0011811 3300053151 Bacteria 2352
321 Ga0500616_0000390 3300053153 Bacteria 61067
322 Ga0500616_0005497 3300053153 Bacteria 8593
323 Ga0500622_0002043 3300053156 Bacteria 15042
324 Ga0500634_0013546 3300053161 Bacteria 4279
325 Ga0500634_0039320 3300053161 Bacteria 2571

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046458 Ga0495591_026188 Ga0495591_026188_29_724 228
2 3300048920 Ga0496117_0326828 Ga0496117_0326828_77_766 228
3 3300041501 Ga0451845_0377352 Ga0451845_0377352_194_982 261
4 3300046542 Ga0495597_0019040 Ga0495597_0019040_2394_3188 264
5 3300046460 Ga0495638_0007727 Ga0495638_0007727_3961_4776 268
6 3300046501 Ga0495607_0000824 Ga0495607_0000824_22019_22834 268
7 3300046519 Ga0495632_0005178 Ga0495632_0005178_544_1359 268
8 3300046522 Ga0495643_0003452 Ga0495643_0003452_6348_7163 268
9 3300046542 Ga0495597_0001390 Ga0495597_0001390_6378_7193 268
10 3300047470 Ga0495681_0005701 Ga0495681_0005701_1645_2460 268
11 3300047472 Ga0495686_0007516 Ga0495686_0007516_4706_5521 268
12 3300048091 Ga0495626_0044706 Ga0495626_0044706_864_1679 268
13 3300049459 Ga0495678_000219 Ga0495678_000219_59072_59887 268
14 3300048920 Ga0496117_0004809 Ga0496117_0004809_6244_7089 273
15 3300048921 Ga0496118_0006430 Ga0496118_0006430_6355_7200 273
16 3300041405 Ga0439438_000022 Ga0439438_000022_52182_53114 277
17 3300041407 Ga0439447_000431 Ga0439447_000431_10948_11880 277
18 3300041997 Ga0439431_0000001 Ga0439431_0000001_52661_53593 277
19 3300042006 Ga0439432_000005 Ga0439432_000005_49983_50915 277
20 3300046519 Ga0495632_0023116 Ga0495632_0023116_2244_3149 281
21 iso_pu_bacteria 8057160832 8057160981 284
22 3300046512 Ga0495610_0000044 Ga0495610_0000044_42741_43646 286
23 3300046515 Ga0495620_0065298 Ga0495620_0065298_466_1371 286
24 3300025298 Ga0209050_1000402 Ga0209050_100040258 293
25 3300028794 Ga0307515_10001079 Ga0307515_1000107940 293
26 3300031456 Ga0307513_10010407 Ga0307513_1001040714 293
27 3300031456 Ga0307513_10190988 Ga0307513_101909882 293
28 3300047322 Ga0495680_0184445 Ga0495680_0184445_485_1393 293
29 3300048924 Ga0496121_0002392 Ga0496121_0002392_22333_23277 293
30 3300048927 Ga0496124_0003193 Ga0496124_0003193_6806_7750 293
31 3300044684 Ga0466966_0286957 Ga0466966_0286957_68_955 295
32 3300053161 Ga0500634_0039320 Ga0500634_0039320_1502_2389 295
33 iso_pu_bacteria 2928070936 2928078299 295
34 3300037312 Ga0395899_0061712 Ga0395899_0061712_713_1621 296
35 3300037471 Ga0395905_0075639 Ga0395905_0075639_549_1457 296
36 3300038443 Ga0395901_0252018 Ga0395901_0252018_411_1319 296
37 iso_pu_bacteria 2929144301 2929146612 297
38 iso_pu_bacteria 8054302542 8054306217 297
39 3300021320 Ga0214544_1000030 Ga0214544_100003019 298
40 3300021321 Ga0214542_1000026 Ga0214542_100002619 298
41 3300021324 Ga0214545_1000015 Ga0214545_100001519 298
42 3300021327 Ga0214543_1000036 Ga0214543_100003619 298
43 3300041491 Ga0451833_0965251 Ga0451833_0965251_75_977 298
44 3300048928 Ga0496125_0046389 Ga0496125_0046389_2474_3370 298
45 3300053153 Ga0500616_0005497 Ga0500616_0005497_3694_4596 298
46 iso_pu_bacteria 2515154112 2515627909 298
47 iso_pu_bacteria 2515154123 2515687824 298
48 iso_pu_bacteria 2554235234 2555257793 298
49 iso_pu_bacteria 2582581279 2585148309 298
50 iso_pu_bacteria 2595698237 2596376031 298
51 iso_pu_bacteria 2602042067 2603702906 298
52 iso_pu_bacteria 2602042109 2603866788 298
53 iso_pu_bacteria 2818991438 2819551830 298
54 iso_pu_bacteria 2818991438 2819552746 298
55 iso_pu_bacteria 2818991466 2819714923 298
56 iso_pu_bacteria 2824600985 2824603781 298
57 iso_pu_bacteria 2838022645 2838023556 298
58 iso_pu_bacteria 2842198810 2842199070 298
59 iso_pu_bacteria 2842333319 2842334042 298
60 iso_pu_bacteria 2842698319 2842702113 298
61 iso_pu_bacteria 2849573788 2849578302 298
62 iso_pu_bacteria 2898329390 2898331527 298
63 iso_pu_bacteria 2900634093 2900639837 298
64 iso_pu_bacteria 2902405164 2902408240 298
65 iso_pu_bacteria 2919108558 2919109008 298
66 iso_pu_bacteria 2928125067 2928130285 298
67 iso_pu_bacteria 2929189879 2929192516 298
68 iso_pu_bacteria 2935916978 2935923768 298
69 iso_pu_bacteria 2945961074 2945963708 298
70 iso_pu_bacteria 2971820967 2971823568 298
71 iso_pu_bacteria 8019629233 8019637378 298
72 iso_pu_bacteria 8019638758 8019639838 298
73 iso_pu_bacteria 8019659431 8019667759 298
74 3300005366 Ga0070659_100005133 Ga0070659_1000051337 299
75 3300005548 Ga0070665_100003121 Ga0070665_1000031219 299
76 3300005618 Ga0068864_100143518 Ga0068864_1001435182 299
77 3300005841 Ga0068863_100188562 Ga0068863_1001885621 299
78 3300006946 Ga0079104_1000049 Ga0079104_1000049138 299
79 3300009036 Ga0105244_10048002 Ga0105244_100480022 299
80 3300013102 Ga0157371_10001479 Ga0157371_100014798 299
81 3300026088 Ga0207641_10456283 Ga0207641_104562831 299
82 3300027111 Ga0209281_1000012 Ga0209281_100001249 299
83 3300028379 Ga0268266_10039539 Ga0268266_100395393 299
84 3300042006 Ga0439432_005367 Ga0439432_005367_1930_2961 299
85 3300042115 Ga0450911_000994 Ga0450911_000994_4398_5339 299
86 3300046513 Ga0495616_0054387 Ga0495616_0054387_647_1546 299
87 3300048919 Ga0496116_0004613 Ga0496116_0004613_10602_11633 299
88 3300048924 Ga0496121_0003747 Ga0496121_0003747_9940_10971 299
89 iso_pu_bacteria 2599185292 2599907506 299
90 iso_pu_bacteria 2775506706 2775539109 299
91 iso_pu_bacteria 2900634093 2900643450 299
92 iso_pu_bacteria 2969304461 2969307559 299
93 iso_pu_bacteria 8055097453 8055098927 299
94 3300009036 Ga0105244_10021164 Ga0105244_100211644 300
95 3300013307 Ga0157372_10003399 Ga0157372_1000339910 300
96 3300025728 Ga0207655_1070930 Ga0207655_10709301 300
97 3300048919 Ga0496116_0000556 Ga0496116_0000556_19280_20266 300
98 3300048922 Ga0496119_0001048 Ga0496119_0001048_7143_8129 300
99 3300048923 Ga0496120_0000114 Ga0496120_0000114_89141_90127 300
100 3300048927 Ga0496124_0000176 Ga0496124_0000176_6949_7935 300
101 3300048927 Ga0496124_0007443 Ga0496124_0007443_10027_11013 300
102 3300053161 Ga0500634_0013546 Ga0500634_0013546_1675_2592 300
103 iso_pu_bacteria 2643221571 2643869942 300
104 iso_pu_bacteria 2791355196 2793062886 300
105 iso_pu_bacteria 2826581358 2826585393 300
106 iso_pu_bacteria 2842815866 2842819672 300
107 iso_pu_bacteria 2842849001 2842849100 300
108 iso_pu_bacteria 2932784394 2932791790 300
109 iso_pu_bacteria 2932828146 2932836290 300
110 iso_pu_bacteria 2935638405 2935645675 300
111 iso_pu_bacteria 2935665750 2935673187 300
112 iso_pu_bacteria 2935827899 2935835065 300
113 iso_pu_bacteria 2935837841 2935846108 300
114 iso_pu_bacteria 2941538514 2941546196 300
115 iso_pu_bacteria 8016511872 8016513199 300
116 iso_pu_bacteria 8017057580 8017067688 300
117 iso_pu_bacteria 8054302542 8054304342 300
118 iso_pu_bacteria 8056177738 8056182398 300
119 iso_pu_bacteria 8057101203 8057102170 300
120 3300005327 Ga0070658_10170979 Ga0070658_101709792 301
121 3300005328 Ga0070676_10109565 Ga0070676_101095651 301
122 3300005336 Ga0070680_100157221 Ga0070680_1001572212 301
123 3300005338 Ga0068868_100548745 Ga0068868_1005487451 301
124 3300005339 Ga0070660_100296195 Ga0070660_1002961952 301
125 3300005344 Ga0070661_100059191 Ga0070661_1000591911 301
126 3300005344 Ga0070661_100161328 Ga0070661_1001613281 301
127 3300005355 Ga0070671_100052694 Ga0070671_1000526942 301
128 3300005355 Ga0070671_100598929 Ga0070671_1005989291 301
129 3300005366 Ga0070659_100067346 Ga0070659_1000673464 301
130 3300005578 Ga0068854_100486669 Ga0068854_1004866691 301
131 3300006058 Ga0075432_10011990 Ga0075432_100119902 301
132 3300009011 Ga0105251_10000005 Ga0105251_10000005156 301
133 3300009092 Ga0105250_10000094 Ga0105250_1000009441 301
134 3300013100 Ga0157373_10080582 Ga0157373_100805821 301
135 3300013102 Ga0157371_10070127 Ga0157371_100701271 301
136 3300025711 Ga0207696_1000201 Ga0207696_100020152 301
137 3300025735 Ga0207713_1000036 Ga0207713_100003646 301
138 3300025903 Ga0207680_10324444 Ga0207680_103244441 301
139 3300025907 Ga0207645_10065677 Ga0207645_100656774 301
140 3300025919 Ga0207657_10038714 Ga0207657_100387145 301
141 3300025920 Ga0207649_10443622 Ga0207649_104436221 301
142 3300025931 Ga0207644_10028435 Ga0207644_100284352 301
143 3300025933 Ga0207706_10038920 Ga0207706_100389205 301
144 3300025981 Ga0207640_10148760 Ga0207640_101487603 301
145 3300026067 Ga0207678_10015580 Ga0207678_100155804 301
146 3300027907 Ga0207428_10020290 Ga0207428_100202904 301
147 3300046453 Ga0495627_001472 Ga0495627_001472_3615_4520 301
148 3300046471 Ga0495650_0000507 Ga0495650_0000507_45826_46731 301
149 3300046513 Ga0495616_0082272 Ga0495616_0082272_576_1481 301
150 3300047323 Ga0495683_0002829 Ga0495683_0002829_5300_6205 301
151 3300047443 Ga0495687_002151 Ga0495687_002151_8156_9061 301
152 3300047470 Ga0495681_0000014 Ga0495681_0000014_85595_86500 301
153 3300047470 Ga0495681_0000584 Ga0495681_0000584_9943_10848 301
154 3300048090 Ga0495615_0001025 Ga0495615_0001025_435_1340 301
155 3300048925 Ga0496122_0054011 Ga0496122_0054011_1922_2827 301
156 3300048926 Ga0496123_0001983 Ga0496123_0001983_22010_22915 301
157 3300048929 Ga0496126_0001199 Ga0496126_0001199_547_1518 301
158 3300049575 Ga0501039_0465267 Ga0501039_0465267_22_927 301
159 3300049823 Ga0501044_0007121 Ga0501044_0007121_881_1804 301
160 3300053156 Ga0500622_0002043 Ga0500622_0002043_2714_3619 301
161 iso_pu_bacteria 2508501123 2509119010 301
162 3300003320 rootH2_10283102 rootH2_102831021 302
163 3300003771 Ga0055526_1023142 Ga0055526_10231421 302
164 3300003791 Ga0055530_10005994 Ga0055530_100059942 302
165 3300005336 Ga0070680_100413539 Ga0070680_1004135391 302
166 3300005539 Ga0068853_100006263 Ga0068853_1000062632 302
167 3300005937 Ga0081455_10000010 Ga0081455_1000001051 302
168 3300005937 Ga0081455_10000010 Ga0081455_1000001094 302
169 3300005937 Ga0081455_10000391 Ga0081455_1000039121 302
170 3300005981 Ga0081538_10057638 Ga0081538_100576382 302
171 3300005983 Ga0081540_1038714 Ga0081540_10387142 302
172 3300005985 Ga0081539_10000045 Ga0081539_10000045124 302
173 3300006177 Ga0075362_10013026 Ga0075362_100130263 302
174 3300006178 Ga0075367_10051745 Ga0075367_100517452 302
175 3300006195 Ga0075366_10007706 Ga0075366_100077064 302
176 3300006931 Ga0097620_100130002 Ga0097620_1001300022 302
177 3300009011 Ga0105251_10000015 Ga0105251_1000001585 302
178 3300009011 Ga0105251_10002917 Ga0105251_100029174 302
179 3300009092 Ga0105250_10000509 Ga0105250_1000050910 302
180 3300009092 Ga0105250_10003185 Ga0105250_100031856 302
181 3300009093 Ga0105240_10001449 Ga0105240_1000144927 302
182 3300009093 Ga0105240_10047145 Ga0105240_100471455 302
183 3300009174 Ga0105241_10119383 Ga0105241_101193832 302
184 3300009545 Ga0105237_10000882 Ga0105237_1000088227 302
185 3300009551 Ga0105238_10007420 Ga0105238_100074202 302
186 3300010375 Ga0105239_10003438 Ga0105239_1000343811 302
187 3300010375 Ga0105239_10066203 Ga0105239_100662034 302
188 3300014326 Ga0157380_10166490 Ga0157380_101664901 302
189 3300015679 Ga0183366_1001 Ga0183366_100170 302
190 3300015680 Ga0183370_1001 Ga0183370_100170 302
191 3300015685 Ga0183369_1001 Ga0183369_100170 302
192 3300015687 Ga0183368_1001 Ga0183368_100170 302
193 3300025256 Ga0209759_1001891 Ga0209759_10018917 302
194 3300025292 Ga0209676_1006215 Ga0209676_10062154 302
195 3300025295 Ga0209564_1001409 Ga0209564_10014097 302
196 3300025298 Ga0209050_1000148 Ga0209050_1000148106 302
197 3300025298 Ga0209050_1001074 Ga0209050_10010748 302
198 3300025711 Ga0207696_1000410 Ga0207696_100041028 302
199 3300025711 Ga0207696_1001899 Ga0207696_100189910 302
200 3300025735 Ga0207713_1000003 Ga0207713_1000003406 302
201 3300025735 Ga0207713_1008893 Ga0207713_10088933 302
202 3300025913 Ga0207695_10025702 Ga0207695_100257022 302
203 3300025913 Ga0207695_10039602 Ga0207695_100396022 302
204 3300025914 Ga0207671_10022478 Ga0207671_100224783 302
205 3300025924 Ga0207694_10004425 Ga0207694_100044259 302
206 3300026041 Ga0207639_10038364 Ga0207639_100383642 302
207 3300037312 Ga0395899_0002516 Ga0395899_0002516_1303_2334 302
208 3300037312 Ga0395899_0050090 Ga0395899_0050090_1133_2041 302
209 3300037418 Ga0395900_0000006 Ga0395900_0000006_379450_380481 302
210 3300037418 Ga0395900_0062092 Ga0395900_0062092_2148_3056 302
211 3300037466 Ga0395898_0045183 Ga0395898_0045183_27_941 302
212 3300037471 Ga0395905_0002508 Ga0395905_0002508_6398_7306 302
213 3300037471 Ga0395905_0011368 Ga0395905_0011368_684_1637 302
214 3300037471 Ga0395905_0176079 Ga0395905_0176079_1068_1982 302
215 3300038443 Ga0395901_0000001 Ga0395901_0000001_422698_423729 302
216 3300038443 Ga0395901_0009583 Ga0395901_0009583_4161_5069 302
217 3300038443 Ga0395901_0288090 Ga0395901_0288090_236_1189 302
218 3300044842 Ga0466957_0224590 Ga0466957_0224590_297_1205 302
219 3300045836 Ga0466958_0341305 Ga0466958_0341305_26_934 302
220 3300046453 Ga0495627_001970 Ga0495627_001970_1537_2445 302
221 3300046453 Ga0495627_038116 Ga0495627_038116_484_1392 302
222 3300046460 Ga0495638_0000667 Ga0495638_0000667_25415_26323 302
223 3300046500 Ga0495596_0000638 Ga0495596_0000638_2071_2979 302
224 3300046500 Ga0495596_0009227 Ga0495596_0009227_3125_4033 302
225 3300046501 Ga0495607_0011555 Ga0495607_0011555_183_1091 302
226 3300046501 Ga0495607_0029850 Ga0495607_0029850_1038_1946 302
227 3300046501 Ga0495607_0084943 Ga0495607_0084943_37_945 302
228 3300046507 Ga0495606_0015764 Ga0495606_0015764_3519_4427 302
229 3300046512 Ga0495610_0000063 Ga0495610_0000063_46772_47680 302
230 3300046512 Ga0495610_0003127 Ga0495610_0003127_4599_5507 302
231 3300046512 Ga0495610_0008731 Ga0495610_0008731_5469_6377 302
232 3300046519 Ga0495632_0018554 Ga0495632_0018554_242_1150 302
233 3300046519 Ga0495632_0029192 Ga0495632_0029192_1062_1970 302
234 3300046522 Ga0495643_0003968 Ga0495643_0003968_7761_8669 302
235 3300046522 Ga0495643_0012408 Ga0495643_0012408_2338_3246 302
236 3300046522 Ga0495643_0013985 Ga0495643_0013985_2410_3318 302
237 3300046522 Ga0495643_0099002 Ga0495643_0099002_455_1363 302
238 3300046522 Ga0495643_0099807 Ga0495643_0099807_53_961 302
239 3300046524 Ga0495648_0000865 Ga0495648_0000865_7801_8709 302
240 3300046538 Ga0495609_0005517 Ga0495609_0005517_3050_3958 302
241 3300046542 Ga0495597_0107032 Ga0495597_0107032_235_1143 302
242 3300046616 Ga0495668_0186431 Ga0495668_0186431_90_998 302
243 3300046616 Ga0495668_0234345 Ga0495668_0234345_38_946 302
244 3300046660 Ga0495625_0015807 Ga0495625_0015807_748_1656 302
245 3300046692 Ga0495671_0089145 Ga0495671_0089145_218_1126 302
246 3300047320 Ga0495672_0150158 Ga0495672_0150158_240_1148 302
247 3300047443 Ga0495687_072052 Ga0495687_072052_353_1261 302
248 3300047470 Ga0495681_0000891 Ga0495681_0000891_19110_20018 302
249 3300047472 Ga0495686_0002385 Ga0495686_0002385_11012_11920 302
250 3300047472 Ga0495686_0005803 Ga0495686_0005803_4573_5481 302
251 3300048090 Ga0495615_0000056 Ga0495615_0000056_6668_7576 302
252 3300048091 Ga0495626_0000779 Ga0495626_0000779_27262_28170 302
253 3300048091 Ga0495626_0002037 Ga0495626_0002037_11006_11914 302
254 3300048915 Ga0496112_0311695 Ga0496112_0311695_342_1250 302
255 3300048919 Ga0496116_0000060 Ga0496116_0000060_246231_247139 302
256 3300048920 Ga0496117_0012458 Ga0496117_0012458_901_1809 302
257 3300048921 Ga0496118_0015426 Ga0496118_0015426_532_1440 302
258 3300048924 Ga0496121_0000190 Ga0496121_0000190_111235_112143 302
259 3300048924 Ga0496121_0000538 Ga0496121_0000538_44121_45029 302
260 3300048924 Ga0496121_0040215 Ga0496121_0040215_2826_3734 302
261 3300048925 Ga0496122_0011692 Ga0496122_0011692_2208_3116 302
262 3300048926 Ga0496123_0002882 Ga0496123_0002882_2564_3472 302
263 3300048927 Ga0496124_0003306 Ga0496124_0003306_4108_5016 302
264 3300048927 Ga0496124_0004514 Ga0496124_0004514_6871_7779 302
265 3300048928 Ga0496125_0003049 Ga0496125_0003049_16652_17560 302
266 3300048929 Ga0496126_0001769 Ga0496126_0001769_5225_6133 302
267 3300048929 Ga0496126_0003079 Ga0496126_0003079_20507_21415 302
268 3300048929 Ga0496126_0473434 Ga0496126_0473434_22_930 302
269 3300050490 nmdc:mga03n38_23693_c1 nmdc:mga03n38_23693_c1_66_1040 302
270 3300050493 nmdc:mga0k408_6600_c1 nmdc:mga0k408_6600_c1_2177_3151 302
271 3300053087 Ga0500643_004932 Ga0500643_004932_1106_2014 302
272 3300053087 Ga0500643_006674 Ga0500643_006674_2724_3671 302
273 3300053098 Ga0500650_0000054 Ga0500650_0000054_20517_21488 302
274 3300053102 Ga0500554_010902 Ga0500554_010902_410_1318 302
275 3300053108 Ga0500562_051030 Ga0500562_051030_83_1054 302
276 3300053134 Ga0500658_0009013 Ga0500658_0009013_1207_2115 302
277 3300053139 Ga0500568_0002454 Ga0500568_0002454_349_1257 302
278 3300053151 Ga0500604_0011811 Ga0500604_0011811_1285_2193 302
279 3300053153 Ga0500616_0000390 Ga0500616_0000390_51592_52530 302
280 iso_pu_bacteria 2889306138 2889311931 302
281 3300003856 Ga0058692_1012357 Ga0058692_10123571 303
282 3300006946 Ga0079104_1028415 Ga0079104_10284151 303
283 3300013307 Ga0157372_10020574 Ga0157372_100205742 303
284 3300027312 Ga0209371_1007810 Ga0209371_10078102 303
285 3300030500 Ga0268256_1008074 Ga0268256_10080742 303
286 3300031911 Ga0307412_10142992 Ga0307412_101429922 303
287 3300032004 Ga0307414_10166603 Ga0307414_101666031 303
288 3300032005 Ga0307411_10207391 Ga0307411_102073912 303
289 3300041407 Ga0439447_037325 Ga0439447_037325_51_962 303
290 3300042006 Ga0439432_000983 Ga0439432_000983_8972_9883 303
291 3300042115 Ga0450911_000060 Ga0450911_000060_26218_27129 303
292 3300045049 Ga0466959_0033512 Ga0466959_0033512_238_1149 303
293 3300046474 Ga0495605_0000001 Ga0495605_0000001_531998_532909 303
294 3300046524 Ga0495648_0188057 Ga0495648_0188057_12_923 303
295 3300046692 Ga0495671_0000340 Ga0495671_0000340_27080_27991 303
296 3300047469 Ga0495673_0000505 Ga0495673_0000505_3615_4526 303
297 2162886011 MRS1b_contig_5790239 MRS1b_0776.00000860 304
298 3300005290 Ga0065712_10067802 Ga0065712_1006780210 304
299 3300009011 Ga0105251_10002218 Ga0105251_100022189 304
300 3300009011 Ga0105251_10005810 Ga0105251_100058102 304
301 3300009092 Ga0105250_10001280 Ga0105250_100012808 304
302 3300013100 Ga0157373_10000822 Ga0157373_1000082217 304
303 3300013100 Ga0157373_10016299 Ga0157373_100162991 304
304 3300013306 Ga0163162_10004160 Ga0163162_100041605 304
305 3300014497 Ga0182008_10004789 Ga0182008_100047892 304
306 3300017792 Ga0163161_10080705 Ga0163161_100807052 304
307 3300017792 Ga0163161_10099224 Ga0163161_100992242 304
308 3300017792 Ga0163161_10108316 Ga0163161_101083161 304
309 3300025230 Ga0209563_100392 Ga0209563_10039213 304
310 3300025711 Ga0207696_1001110 Ga0207696_10011108 304
311 3300025728 Ga0207655_1009622 Ga0207655_10096224 304
312 3300025735 Ga0207713_1012728 Ga0207713_10127283 304
313 3300030742 Ga0316183_1028073 Ga0316183_10280733 304
314 3300041405 Ga0439438_015719 Ga0439438_015719_157_1071 304
315 3300042006 Ga0439432_000026 Ga0439432_000026_7637_8554 304
316 3300042137 Ga0450902_001132 Ga0450902_001132_2531_3454 304
317 3300046453 Ga0495627_029689 Ga0495627_029689_130_1044 304
318 3300046457 Ga0495590_0018695 Ga0495590_0018695_78_992 304
319 3300046458 Ga0495591_000199 Ga0495591_000199_54558_55472 304
320 3300046458 Ga0495591_002249 Ga0495591_002249_2471_3385 304
321 3300046458 Ga0495591_007584 Ga0495591_007584_675_1589 304
322 3300046460 Ga0495638_0051645 Ga0495638_0051645_818_1753 304
323 3300046471 Ga0495650_0003851 Ga0495650_0003851_1842_2756 304
324 3300046474 Ga0495605_0000007 Ga0495605_0000007_169380_170294 304
325 3300046491 Ga0495584_0000869 Ga0495584_0000869_13890_14804 304
326 3300046492 Ga0495585_0000120 Ga0495585_0000120_71733_72647 304
327 3300046499 Ga0495594_0023093 Ga0495594_0023093_1831_2745 304
328 3300046501 Ga0495607_0112324 Ga0495607_0112324_304_1218 304
329 3300046506 Ga0495583_0000007 Ga0495583_0000007_128060_128974 304
330 3300046506 Ga0495583_0004618 Ga0495583_0004618_1076_1990 304
331 3300046507 Ga0495606_0019229 Ga0495606_0019229_2560_3474 304
332 3300046512 Ga0495610_0007821 Ga0495610_0007821_5466_6380 304
333 3300046512 Ga0495610_0012083 Ga0495610_0012083_2870_3784 304
334 3300046515 Ga0495620_0000110 Ga0495620_0000110_51665_52579 304
335 3300046518 Ga0495631_0001880 Ga0495631_0001880_9991_10905 304
336 3300046518 Ga0495631_0013960 Ga0495631_0013960_1825_2739 304
337 3300046519 Ga0495632_0018157 Ga0495632_0018157_457_1371 304
338 3300046522 Ga0495643_0000089 Ga0495643_0000089_107101_108018 304
339 3300046522 Ga0495643_0006298 Ga0495643_0006298_922_1836 304
340 3300046522 Ga0495643_0015374 Ga0495643_0015374_412_1326 304
341 3300046524 Ga0495648_0000516 Ga0495648_0000516_34177_35091 304
342 3300046524 Ga0495648_0000764 Ga0495648_0000764_15100_16014 304
343 3300046524 Ga0495648_0001957 Ga0495648_0001957_7586_8500 304
344 3300046524 Ga0495648_0071687 Ga0495648_0071687_890_1804 304
345 3300046524 Ga0495648_0112901 Ga0495648_0112901_441_1355 304
346 3300046529 Ga0495652_0105930 Ga0495652_0105930_660_1580 304
347 3300046530 Ga0495654_0016471 Ga0495654_0016471_1036_1950 304
348 3300046530 Ga0495654_0056909 Ga0495654_0056909_567_1481 304
349 3300046538 Ga0495609_0000004 Ga0495609_0000004_171838_172752 304
350 3300046542 Ga0495597_0000968 Ga0495597_0000968_1852_2766 304
351 3300046543 Ga0495645_0055744 Ga0495645_0055744_1777_2691 304
352 3300046558 Ga0495633_0000020 Ga0495633_0000020_54647_55561 304
353 3300046558 Ga0495633_0106391 Ga0495633_0106391_137_1051 304
354 3300046616 Ga0495668_0026347 Ga0495668_0026347_930_1844 304
355 3300046648 Ga0495611_0001229 Ga0495611_0001229_12135_13049 304
356 3300046648 Ga0495611_0012881 Ga0495611_0012881_97_1011 304
357 3300046665 Ga0495661_0000009 Ga0495661_0000009_128357_129271 304
358 3300046665 Ga0495661_0009435 Ga0495661_0009435_1623_2537 304
359 3300046690 Ga0495624_0106727 Ga0495624_0106727_731_1651 304
360 3300046691 Ga0495670_0025376 Ga0495670_0025376_1828_2742 304
361 3300046691 Ga0495670_0030029 Ga0495670_0030029_1654_2568 304
362 3300046692 Ga0495671_0007803 Ga0495671_0007803_3573_4487 304
363 3300046794 Ga0495589_0001743 Ga0495589_0001743_3986_4900 304
364 3300046810 Ga0495660_0001637 Ga0495660_0001637_8658_9572 304
365 3300046810 Ga0495660_0022438 Ga0495660_0022438_1360_2274 304
366 3300047320 Ga0495672_0064676 Ga0495672_0064676_322_1236 304
367 3300047323 Ga0495683_0000003 Ga0495683_0000003_45645_46559 304
368 3300047446 Ga0495679_000122 Ga0495679_000122_21059_21973 304
369 3300047469 Ga0495673_0000804 Ga0495673_0000804_26823_27737 304
370 3300047470 Ga0495681_0045261 Ga0495681_0045261_549_1463 304
371 3300047472 Ga0495686_0003542 Ga0495686_0003542_918_1832 304
372 3300047472 Ga0495686_0037884 Ga0495686_0037884_124_1038 304
373 3300048913 Ga0496110_0021581 Ga0496110_0021581_1923_2837 304
374 3300048913 Ga0496110_0039237 Ga0496110_0039237_112_1029 304
375 3300048924 Ga0496121_0009986 Ga0496121_0009986_4410_5324 304
376 3300048925 Ga0496122_0037380 Ga0496122_0037380_2803_3717 304
377 3300048927 Ga0496124_0004785 Ga0496124_0004785_9396_10310 304
378 3300048927 Ga0496124_0007929 Ga0496124_0007929_2143_3060 304
379 3300049459 Ga0495678_000007 Ga0495678_000007_54380_55294 304
380 3300049459 Ga0495678_003226 Ga0495678_003226_1698_2612 304
381 3300053087 Ga0500643_018085 Ga0500643_018085_1021_1935 304
382 3300053118 Ga0500594_0005866 Ga0500594_0005866_296_1210 304

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

35

94

0.97

PF03466

LysR_substrate

LysR substrate binding domain

118

326

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pzj-assembly1.cif.gz_A-2 1.60 angstrom resolution crystal structure of a transcriptional regulator of the lysr family from eggerthella lenta dsm 2243 0.908 9 74
7trv-assembly1.cif.gz_B crystal structure of the dna-binding domain of the lysr family transcriptional regulator yfba from yersinia pestis 0.9079 8 88
5x0n-assembly2.cif.gz_B regulatory domain of variant c227s aphb from vibrio vulnificus 0.9011 96 294
5x0n-assembly1.cif.gz_A regulatory domain of variant c227s aphb from vibrio vulnificus 0.8986 98 294
5x0n-assembly3.cif.gz_E regulatory domain of variant c227s aphb from vibrio vulnificus 0.896 95 298
ID Description Score Start End Superfamily
af_P75836_3_89_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9579 7 90 1.10.10.10
af_Q57083_1_88_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.954 8 86 1.10.10.10
af_P75836_90_290_3.40.190.290 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2; 0.9435 95 294 3.40.190.290
af_P52696_4_93_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9405 8 91 1.10.10.10
af_P77746_4_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9333 7 86 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7W6XI29-F1-model_v4 DNA-binding transcriptional LysR family regulator 0.975 3 76 GO:0003700
GO:0006351
GO:0043565
AF-A0A561GQJ2-F1-model_v4 deleted 0.9426 158 301
AF-A0A4Q3HKI7-F1-model_v4 deleted 0.9397 3 96
AF-A0A3D4TW18-F1-model_v4 LysR family transcriptional regulator 0.9362 1 77 GO:0003700
GO:0006351
GO:0043565
AF-A0A4R3XGC6-F1-model_v4 LysR substrate binding domain-containing protein 0.9294 158 273 GO:0003700
GO:0006351
GO:0043565

Feature Viewer

pLDDT pTM Quality
90.82 0.67 Medium
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Predicted Structure (AlphaFold2)

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