F427105

General Info

Members Datasets Scaffolds Average Seq Length
375 229 332 430

Family's Representative Sequence

Representative Sequence 3300038741|Ga0400488_32126|Ga0400488_32126_11_1198
Length 395
Sequence MQKTGYITLDPGYKNTGSCSSTITYLDGNKGILRYRGYAIEDLAEKCSFVEVAYLLLHNKLPNALELEQFRALLNRFALLHEDMLHFFDHFPPHAAPMSILSVMVNSLHNFYPEMSADPLEDLDKTAARLLSKVRTIAAFSYKKNLGHPLVYPRHDLTYCGNFLNMMFDKPVRPYTIIPEVEAAMNKLLILHADHEQNCSTSTVRLVGSAGVNLYASISASINALWGPLHGGANEAVIGMLRAIHNDGNDYQKYIAKAKDKNDPFRLSGFGHRVYRTYDPRGTIIKKACDDILAILNINDPLLDIAKNLEEIALNDAFFVERNLYPNVDFYSGIIYRAIGIPTNMFTVMFALGRLPGWIAQWKEMMQDPATKIGRPRQVYTGATEREFVPMEERP

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
5 2738541283 Pedobacter sp. OK701 Isolate Unclassified
6 2738541284 Pedobacter sp. YR016 Isolate Unclassified
7 2738541302 Pedobacter sp. CF074 Isolate Unclassified
8 2738543023 Pedobacter sp. OK628 Isolate Unclassified
9 2739367651 Pedobacter sp. OK291 Isolate Unclassified
10 2739367656 Pedobacter sp. CF523 Isolate Unclassified
11 2739367663 Pedobacter sp. YR510 Isolate Unclassified
12 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
13 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
14 2818991437 Pedobacter terrae 518 Isolate Unclassified
15 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
16 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
17 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
18 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
19 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
20 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
21 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
22 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
23 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
24 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
25 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
26 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
27 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
28 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
29 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
30 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
31 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
32 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
33 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
34 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
35 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
36 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
37 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
38 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
39 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
40 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
41 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
42 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
43 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
44 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
45 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
46 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
47 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
48 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
49 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
50 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
51 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
52 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
53 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
54 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
55 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
56 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
57 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
58 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
59 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
60 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
61 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
64 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
65 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
66 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
67 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
68 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
69 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
70 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
71 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
72 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
73 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
74 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
75 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
76 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
77 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
78 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
79 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
80 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
81 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
82 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
83 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
84 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
85 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
86 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
87 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
88 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
89 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
90 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
91 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
92 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
93 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
94 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
95 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
96 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
97 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
98 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
99 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
100 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
101 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
102 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
103 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
104 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
105 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
106 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
107 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
108 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
109 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
110 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
111 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
112 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
113 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
114 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
115 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
116 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
117 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
119 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
120 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
148 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
149 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
150 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
151 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
152 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
153 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
154 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
155 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
156 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
157 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
158 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
159 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
160 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
161 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
162 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
163 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
164 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
165 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
166 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
167 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
168 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
169 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
170 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
171 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
172 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
173 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
174 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
175 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
176 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
177 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
178 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
179 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
180 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
181 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
182 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
183 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
184 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
185 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
186 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
187 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
188 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
189 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
190 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
191 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
192 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
193 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
194 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
195 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
196 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
197 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
198 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
199 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
200 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
201 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
202 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
203 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
204 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
205 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
206 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
207 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
208 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
209 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
210 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
211 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
212 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
213 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
214 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
215 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
216 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
217 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
218 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
219 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
220 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
221 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
222 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
223 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
224 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
225 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
226 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
227 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
228 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
229 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.47
Metatranscriptomes 0.8
Isolates 11.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.07
Nodule 0
Rhizoplane 0.27
Rhizosphere 78.4
Stem 0
Stem Tuber 0
Unclassified 12.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1411852 2162886007 Bacteria 14549
2 JGI24739J22299_10015610 3300001989 Bacteria 2759
3 JGI24737J22298_10000143 3300001990 Bacteria 22223
4 JGI24737J22298_10020979 3300001990 Bacteria 2083
5 JGI24735J21928_10000006 3300002067 Bacteria 339303
6 JGI24735J21928_10008387 3300002067 Bacteria 3342
7 JGI25162J39368_1000089 3300002737 Bacteria 104054
8 JGI25162J39368_1000498 3300002737 Bacteria 29793
9 JGI25152J39213_1000352 3300002773 Bacteria 28744
10 JGI25150J39212_1000019 3300002774 Bacteria 135244
11 JGI25151J46595_10000074 3300003187 Bacteria 135244
12 JGI25165J46597_1000618 3300003214 Bacteria 30063
13 JGI25153J46596_10000056 3300003215 Bacteria 135244
14 rootH1_10016978 3300003316 Bacteria 25561
15 rootH1_10033123 3300003316 Bacteria 7367
16 rootH1_10033123 3300003323 Bacteria 1889
17 rootH2_10018591 3300003320 Bacteria 30571
18 rootH2_10029927 3300003320 Bacteria 24231
19 rootH2_10058912 3300003320 Bacteria 11008
20 rootL2_10010208 3300003322 Bacteria 12601
21 rootL2_10079161 3300003322 Bacteria 12315
22 rootH1_10010194 3300003323 Bacteria 43591
23 rootH1_10017455 3300003323 Bacteria 20752
24 rootH1_10042827 3300003323 Bacteria 4823
25 rootH1_10065583 3300003323 Bacteria 19600
26 rootH1_10086739 3300003323 Bacteria 5539
27 Ga0055536_1000011 3300003781 Bacteria 275969
28 Ga0055530_10001506 3300003791 Bacteria 16863
29 Ga0055531_10000359 3300003794 Bacteria 44255
30 Ga0058863_10077767 3300004799 Bacteria 2127
31 Ga0058861_11949258 3300004800 Bacteria 1656
32 Ga0065714_10002212 3300005288 Bacteria 56085
33 Ga0065714_10002244 3300005288 Bacteria 38170
34 Ga0065714_10065485 3300005288 Bacteria 9793
35 Ga0065714_10066579 3300005288 Bacteria 6623
36 Ga0065714_10072211 3300005288 Bacteria 3398
37 Ga0065714_10114653 3300005288 Bacteria 1426
38 Ga0065704_10000193 3300005289 Bacteria 203271
39 Ga0065704_10108282 3300005289 Bacteria 2033
40 Ga0070658_10000018 3300005327 Bacteria 200558
41 Ga0070676_10000642 3300005328 Bacteria 17019
42 Ga0070683_100130999 3300005329 Bacteria 2373
43 Ga0068868_100008511 3300005338 Bacteria 7347
44 Ga0070660_100003099 3300005339 Bacteria 11423
45 Ga0070660_100282903 3300005339 Bacteria 1357
46 Ga0070673_100011170 3300005364 Bacteria 6124
47 Ga0070659_100000682 3300005366 Bacteria 24721
48 Ga0070659_100004029 3300005366 Bacteria 10463
49 Ga0070678_100027246 3300005456 Bacteria 3879
50 Ga0070662_100000225 3300005457 Bacteria 33224
51 Ga0068867_100000952 3300005459 Bacteria 19720
52 Ga0070679_100025461 3300005530 Bacteria 5806
53 Ga0070665_100000072 3300005548 Bacteria 198575
54 Ga0068855_100000070 3300005563 Bacteria 123584
55 Ga0068855_100023407 3300005563 Bacteria 7399
56 Ga0068855_100032544 3300005563 Bacteria 6225
57 Ga0068857_100014295 3300005577 Bacteria 6917
58 Ga0068856_100000899 3300005614 Bacteria 31842
59 Ga0068856_100009016 3300005614 Bacteria 9706
60 Ga0068852_100007797 3300005616 Bacteria 7840
61 Ga0068864_100137427 3300005618 Bacteria 2202
62 Ga0068866_10035905 3300005718 Bacteria 2424
63 Ga0068870_10020059 3300005840 Bacteria 3250
64 Ga0075366_10006624 3300006195 Bacteria 6357
65 Ga0097621_100000878 3300006237 Bacteria 21148
66 Ga0068871_100008203 3300006358 Bacteria 7503
67 Ga0075428_100015368 3300006844 Bacteria 8489
68 Ga0068865_100000127 3300006881 Bacteria 39327
69 Ga0105240_10000237 3300009093 Bacteria 109895
70 Ga0105240_10013007 3300009093 Bacteria 11459
71 Ga0105240_10048249 3300009093 Bacteria 5383
72 Ga0105240_10127504 3300009093 Bacteria 3056
73 Ga0111539_10011414 3300009094 Bacteria 11151
74 Ga0105243_10172829 3300009148 Bacteria 1873
75 Ga0105241_10004192 3300009174 Bacteria 10645
76 Ga0105242_10014993 3300009176 Bacteria 6008
77 Ga0105237_10000485 3300009545 Bacteria 56664
78 Ga0105237_10000589 3300009545 Bacteria 50628
79 Ga0105237_10001308 3300009545 Bacteria 33108
80 Ga0105237_10007484 3300009545 Bacteria 11941
81 Ga0105237_10011904 3300009545 Bacteria 9199
82 Ga0105237_10050437 3300009545 Bacteria 4181
83 Ga0105238_10015399 3300009551 Bacteria 7739
84 Ga0105239_10000039 3300010375 Bacteria 203537
85 Ga0105239_10000120 3300010375 Bacteria 110003
86 Ga0105239_10001382 3300010375 Bacteria 32554
87 Ga0105239_10005501 3300010375 Bacteria 14846
88 Ga0105239_10005560 3300010375 Bacteria 14739
89 Ga0105239_10007831 3300010375 Bacteria 12218
90 Ga0105239_10019055 3300010375 Bacteria 7582
91 Ga0157373_10000121 3300013100 Bacteria 60158
92 Ga0157373_10000337 3300013100 Bacteria 38082
93 Ga0157373_10002034 3300013100 Bacteria 15324
94 Ga0157373_10079420 3300013100 Bacteria 2314
95 Ga0157373_10137482 3300013100 Bacteria 1718
96 Ga0157371_10000009 3300013102 Bacteria 392895
97 Ga0157371_10000251 3300013102 Bacteria 74986
98 Ga0157371_10000426 3300013102 Bacteria 51710
99 Ga0157371_10002317 3300013102 Bacteria 18296
100 Ga0157371_10038934 3300013102 Bacteria 3401
101 Ga0157370_10002315 3300013104 Bacteria 23062
102 Ga0157370_10008288 3300013104 Bacteria 11216
103 Ga0157370_10011991 3300013104 Bacteria 9031
104 Ga0157370_10051970 3300013104 Bacteria 3913
105 Ga0157370_10058355 3300013104 Bacteria 3668
106 Ga0157369_10000460 3300013105 Bacteria 54042
107 Ga0157369_10057722 3300013105 Bacteria 4186
108 Ga0157369_10097709 3300013105 Bacteria 3132
109 Ga0157369_10126520 3300013105 Bacteria 2709
110 Ga0157374_10005503 3300013296 Bacteria 10639
111 Ga0157374_10172570 3300013296 Bacteria 2110
112 Ga0163162_10000010 3300013306 Bacteria 302032
113 Ga0163162_10000177 3300013306 Bacteria 58576
114 Ga0163162_10002280 3300013306 Bacteria 18007
115 Ga0163162_10048068 3300013306 Bacteria 4274
116 Ga0157372_10000050 3300013307 Bacteria 140381
117 Ga0157372_10000266 3300013307 Bacteria 57783
118 Ga0157372_10002755 3300013307 Bacteria 19002
119 Ga0157372_10021260 3300013307 Bacteria 7010
120 Ga0157372_10031266 3300013307 Bacteria 5828
121 Ga0157372_10134194 3300013307 Bacteria 2850
122 Ga0157375_10005903 3300013308 Bacteria 10672
123 Ga0157380_10010041 3300014326 Bacteria 6795
124 Ga0182008_10000018 3300014497 Bacteria 230609
125 Ga0182008_10000378 3300014497 Bacteria 34433
126 Ga0182008_10000592 3300014497 Bacteria 26709
127 Ga0182008_10006790 3300014497 Bacteria 6367
128 Ga0182006_1000382 3300015261 Bacteria 36661
129 Ga0182006_1000622 3300015261 Bacteria 25427
130 Ga0182006_1002627 3300015261 Bacteria 9703
131 Ga0182006_1006813 3300015261 Bacteria 5272
132 Ga0182006_1016726 3300015261 Bacteria 3126
133 Ga0182007_10000001 3300015262 Bacteria 1127301
134 Ga0182007_10003351 3300015262 Bacteria 7576
135 Ga0183373_1006 3300015682 Bacteria 328276
136 Ga0163161_10000762 3300017792 Bacteria 25326
137 Ga0163161_10001631 3300017792 Bacteria 16494
138 Ga0163161_10002308 3300017792 Bacteria 13670
139 Ga0163161_10028243 3300017792 Bacteria 3982
140 Ga0163161_10041948 3300017792 Bacteria 3289
141 Ga0207427_100359 3300025231 Bacteria 28547
142 Ga0209437_100034 3300025233 Bacteria 494007
143 Ga0209437_100221 3300025233 Bacteria 104135
144 Ga0207425_1000007 3300025245 Bacteria 777411
145 Ga0209026_1000383 3300025250 Bacteria 40563
146 Ga0209026_1000828 3300025250 Bacteria 16479
147 Ga0209129_1000006 3300025258 Bacteria 777761
148 Ga0209233_1000038 3300025261 Bacteria 548972
149 Ga0209233_1009684 3300025261 Bacteria 2922
150 Ga0209233_1013515 3300025261 Bacteria 2330
151 Ga0209676_1000001 3300025292 Bacteria 1852142
152 Ga0209025_1000025 3300025294 Bacteria 524454
153 Ga0209758_1000016 3300025297 Bacteria 778557
154 Ga0209050_1000016 3300025298 Bacteria 729149
155 Ga0209050_1008287 3300025298 Bacteria 5597
156 Ga0209257_1000005 3300025304 Bacteria 1592528
157 Ga0207647_10000662 3300025904 Bacteria 26925
158 Ga0207647_10001962 3300025904 Bacteria 15715
159 Ga0207647_10071889 3300025904 Bacteria 2087
160 Ga0207645_10001724 3300025907 Bacteria 17721
161 Ga0207705_10000036 3300025909 Bacteria 200787
162 Ga0207705_10124773 3300025909 Bacteria 1913
163 Ga0207654_10003904 3300025911 Bacteria 7508
164 Ga0207654_10014278 3300025911 Bacteria 4102
165 Ga0207654_10114982 3300025911 Bacteria 1680
166 Ga0207695_10000013 3300025913 Bacteria 821265
167 Ga0207695_10002976 3300025913 Bacteria 24402
168 Ga0207695_10004800 3300025913 Bacteria 18291
169 Ga0207695_10015831 3300025913 Bacteria 8858
170 Ga0207695_10107313 3300025913 Bacteria 2777
171 Ga0207671_10000272 3300025914 Bacteria 77080
172 Ga0207671_10002624 3300025914 Bacteria 18962
173 Ga0207671_10006239 3300025914 Bacteria 10682
174 Ga0207671_10010985 3300025914 Bacteria 7414
175 Ga0207671_10015584 3300025914 Bacteria 5945
176 Ga0207671_10016827 3300025914 Bacteria 5667
177 Ga0207671_10029846 3300025914 Bacteria 4070
178 Ga0207660_10003963 3300025917 Bacteria 9646
179 Ga0207657_10045633 3300025919 Bacteria 3843
180 Ga0207657_10106681 3300025919 Bacteria 2318
181 Ga0207694_10027710 3300025924 Bacteria 4315
182 Ga0207644_10054509 3300025931 Bacteria 2880
183 Ga0207690_10005322 3300025932 Bacteria 7586
184 Ga0207706_10000317 3300025933 Bacteria 52169
185 Ga0207709_10000008 3300025935 Bacteria 713099
186 Ga0207709_10105071 3300025935 Bacteria 1875
187 Ga0207704_10000044 3300025938 Bacteria 86753
188 Ga0207661_10160884 3300025944 Bacteria 1948
189 Ga0207667_10000009 3300025949 Bacteria 603135
190 Ga0207667_10008541 3300025949 Bacteria 12154
191 Ga0207667_10021526 3300025949 Bacteria 7144
192 Ga0207667_10031481 3300025949 Bacteria 5726
193 Ga0207667_10083626 3300025949 Bacteria 3305
194 Ga0207651_10007665 3300025960 Bacteria 5764
195 Ga0207677_10046870 3300026023 Bacteria 2897
196 Ga0207677_10064138 3300026023 Bacteria 2557
197 Ga0207639_10035907 3300026041 Bacteria 3670
198 Ga0207702_10000507 3300026078 Bacteria 43964
199 Ga0207702_10053646 3300026078 Bacteria 3414
200 Ga0207702_10154329 3300026078 Bacteria 2092
201 Ga0207648_10002139 3300026089 Bacteria 21480
202 Ga0207676_10182432 3300026095 Bacteria 1839
203 Ga0207674_10066545 3300026116 Bacteria 3629
204 Ga0207683_10051262 3300026121 Bacteria 3616
205 Ga0268266_10000089 3300028379 Bacteria 198566
206 Ga0307517_10003551 3300028786 Bacteria 24219
207 Ga0307515_10001481 3300028794 Bacteria 52778
208 Ga0316176_1181288 3300030732 Bacteria 8329
209 Ga0316183_1111157 3300030742 Bacteria 6468
210 Ga0265327_10008108 3300031251 Bacteria 7908
211 Ga0265327_10046539 3300031251 Bacteria 2295
212 Ga0265316_10000125 3300031344 Bacteria 83744
213 Ga0307408_100000162 3300031548 Bacteria 74076
214 Ga0307408_100000481 3300031548 Bacteria 34941
215 Ga0307408_100003496 3300031548 Bacteria 10709
216 Ga0307408_100036816 3300031548 Bacteria 3442
217 Ga0316576_10027898 3300031727 Bacteria 3973
218 Ga0307405_10000010 3300031731 Bacteria 250978
219 Ga0307407_10000042 3300031903 Bacteria 65025
220 Ga0307412_10000077 3300031911 Bacteria 96375
221 Ga0307412_10052036 3300031911 Bacteria 2710
222 Ga0307409_100128027 3300031995 Bacteria 2164
223 Ga0307416_100000216 3300032002 Bacteria 30247
224 Ga0307414_10000028 3300032004 Bacteria 192108
225 Ga0307414_10002866 3300032004 Bacteria 9107
226 Ga0307414_10003864 3300032004 Bacteria 8064
227 Ga0307414_10008019 3300032004 Bacteria 5970
228 Ga0307414_10008173 3300032004 Bacteria 5917
229 Ga0307414_10036786 3300032004 Bacteria 3272
230 Ga0307414_10090960 3300032004 Bacteria 2266
231 Ga0307414_10097523 3300032004 Bacteria 2202
232 Ga0307411_10000912 3300032005 Bacteria 11225
233 Ga0307507_10000345 3300033179 Bacteria 94462
234 Ga0307510_10002378 3300033180 Bacteria 21305
235 Ga0316574_0051796 3300035398 Bacteria 2559
236 Ga0373927_0010342 3300035695 Bacteria 6228
237 Ga0316584_0075524 3300036712 Bacteria 2526
238 Ga0395899_0000002 3300037312 Bacteria 1324310
239 Ga0395899_0000532 3300037312 Bacteria 41711
240 Ga0395899_0000659 3300037312 Bacteria 35170
241 Ga0395899_0010383 3300037312 Bacteria 7135
242 Ga0395900_0000277 3300037418 Bacteria 77256
243 Ga0395900_0001002 3300037418 Bacteria 36638
244 Ga0395900_0015663 3300037418 Bacteria 7729
245 Ga0395900_0173211 3300037418 Bacteria 2196
246 Ga0395898_0009131 3300037466 Bacteria 10446
247 Ga0395898_0053032 3300037466 Bacteria 3961
248 Ga0395905_0000068 3300037471 Bacteria 177163
249 Ga0395905_0004443 3300037471 Bacteria 14577
250 Ga0395905_0034783 3300037471 Bacteria 4731
251 Ga0395901_0000136 3300038443 Bacteria 95382
252 Ga0395901_0024088 3300038443 Bacteria 6244
253 Ga0400488_32126 3300038741 Bacteria 5546
254 Ga0400483_039080 3300039062 Bacteria 3258
255 Ga0436361_0648730 3300039447 Bacteria 10335
256 Ga0451577_0000400 3300042876 Bacteria 79242
257 Ga0451577_0004933 3300042876 Bacteria 13881
258 Ga0451577_0035518 3300042876 Bacteria 4489
259 Ga0453683_0003960 3300044673 Bacteria 10717
260 Ga0466966_0003977 3300044684 Bacteria 9770
261 Ga0453684_0003678 3300044712 Bacteria 34020
262 Ga0453684_0004157 3300044712 Bacteria 31323
263 Ga0453684_0010355 3300044712 Bacteria 15960
264 Ga0453684_0045655 3300044712 Bacteria 5839
265 Ga0453684_0092625 3300044712 Bacteria 3725
266 Ga0466959_0091686 3300045049 Bacteria 2182
267 Ga0451576_0008456 3300045051 Bacteria 12084
268 Ga0451576_0050403 3300045051 Bacteria 4366
269 Ga0466958_0006251 3300045836 Bacteria 6467
270 Ga0495638_0000015 3300046460 Bacteria 414645
271 Ga0495651_0017658 3300046462 Bacteria 5522
272 Ga0495650_0000132 3300046471 Bacteria 174226
273 Ga0495585_0000093 3300046492 Bacteria 94793
274 Ga0495585_0001039 3300046492 Bacteria 23036
275 Ga0495583_0022449 3300046506 Bacteria 3219
276 Ga0495606_0002127 3300046507 Bacteria 23953
277 Ga0495606_0027655 3300046507 Bacteria 4016
278 Ga0495606_0028709 3300046507 Bacteria 3919
279 Ga0495610_0000035 3300046512 Bacteria 189683
280 Ga0495610_0004910 3300046512 Bacteria 9708
281 Ga0495616_0001271 3300046513 Bacteria 17718
282 Ga0495616_0009308 3300046513 Bacteria 5756
283 Ga0495631_0005611 3300046518 Bacteria 6553
284 Ga0495648_0006170 3300046524 Bacteria 9824
285 Ga0495633_0000035 3300046558 Bacteria 185403
286 Ga0495668_0000032 3300046616 Bacteria 254951
287 Ga0495625_0000036 3300046660 Bacteria 221680
288 Ga0495625_0000227 3300046660 Bacteria 88834
289 Ga0495625_0020461 3300046660 Bacteria 5109
290 Ga0495625_0025632 3300046660 Bacteria 4469
291 Ga0495625_0051632 3300046660 Bacteria 2947
292 Ga0495661_0000707 3300046665 Bacteria 33018
293 Ga0495649_0000017 3300046694 Bacteria 221685
294 Ga0495660_0019102 3300046810 Bacteria 3935
295 Ga0495687_009998 3300047443 Bacteria 5244
296 Ga0495687_031608 3300047443 Bacteria 2426
297 Ga0495686_0002391 3300047472 Bacteria 17822
298 Ga0495686_0061036 3300047472 Bacteria 2342
299 Ga0496116_0019307 3300048919 Bacteria 5220
300 Ga0496117_0011593 3300048920 Bacteria 7880
301 Ga0496122_0000746 3300048925 Bacteria 63466
302 Ga0496122_0003440 3300048925 Bacteria 20818
303 Ga0496123_0012746 3300048926 Bacteria 7129
304 Ga0496123_0021701 3300048926 Bacteria 4979
305 Ga0501323_003216 3300049539 Bacteria 1655
306 Ga0501031_0001267 3300049568 Bacteria 15469
307 Ga0501032_0001181 3300049569 Bacteria 20922
308 Ga0501032_0002515 3300049569 Bacteria 14329
309 Ga0501033_0000028 3300049570 Bacteria 161436
310 Ga0501034_0000074 3300049571 Bacteria 175369
311 Ga0501036_0037806 3300049572 Bacteria 4082
312 Ga0501037_0005483 3300049573 Bacteria 9248
313 Ga0501038_0008168 3300049574 Bacteria 9630
314 Ga0501039_0014441 3300049575 Bacteria 6047
315 Ga0501043_0002023 3300049579 Bacteria 17311
316 Ga0501217_002509 3300049661 Bacteria 3622
317 Ga0501223_000674 3300049663 Bacteria 8156
318 Ga0501241_000211 3300049758 Bacteria 13211
319 Ga0501264_000447 3300049761 Bacteria 6290
320 Ga0501044_0001547 3300049823 Bacteria 26989
321 Ga0501045_0014087 3300049824 Bacteria 5662
322 nmdc:mga0k408_386_c1 3300050493 Bacteria 24235
323 nmdc:mga0k408_420_c1 3300050493 Bacteria 18783
324 nmdc:mga08y16_10405_c1 3300050511 Bacteria 9758
325 nmdc:mga08y16_8156_c1 3300050511 Bacteria 10958
326 Ga0500635_0002163 3300053080 Bacteria 4834
327 Ga0500651_0000127 3300053093 Bacteria 47010
328 Ga0500608_004946 3300053122 Bacteria 5227
329 Ga0500618_000003 3300053125 Bacteria 338706
330 Ga0500616_0000043 3300053153 Bacteria 342930
331 Ga0500622_0001867 3300053156 Bacteria 15919
332 Ga0500624_000571 3300053157 Bacteria 10169

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038741 Ga0400488_32126 Ga0400488_32126_11_1198 392
2 iso_pu_bacteria 2902048731 2902050783 418
3 3300031727 Ga0316576_10027898 Ga0316576_100278983 423
4 iso_pu_bacteria 2599185184 2599477082 424
5 iso_pu_bacteria 2721755487 2722730575 424
6 iso_pu_bacteria 2738543023 2739301216 424
7 iso_pu_bacteria 2739367866 2740032964 424
8 iso_pu_bacteria 2839989709 2839991231 424
9 iso_pu_bacteria 2842903701 2842906449 424
10 iso_pu_bacteria 2852627209 2852631308 424
11 iso_pu_bacteria 2884634485 2884634595 424
12 iso_pu_bacteria 2890737413 2890737724 424
13 iso_pu_bacteria 2890804823 2890805720 424
14 iso_pu_bacteria 2896317667 2896319464 424
15 iso_pu_bacteria 2898713307 2898713599 424
16 iso_pu_bacteria 2904780799 2904785153 424
17 iso_pu_bacteria 2910245624 2910248719 424
18 iso_pu_bacteria 2919177583 2919181723 424
19 iso_pu_bacteria 2919186247 2919187253 424
20 iso_pu_bacteria 2919437846 2919442223 424
21 iso_pu_bacteria 2919692658 2919692817 424
22 iso_pu_bacteria 2928078545 2928078994 424
23 iso_pu_bacteria 2928147474 2928148636 424
24 iso_pu_bacteria 2932082852 2932085641 424
25 iso_pu_bacteria 2939664404 2939665478 424
26 iso_pu_bacteria 2977232053 2977236337 424
27 iso_pu_bacteria 3003233435 3003237433 424
28 iso_pu_bacteria 8055588893 8055590814 424
29 iso_pu_bacteria 2585427687 2586207427 425
30 iso_pu_bacteria 2738541283 2738755063 425
31 iso_pu_bacteria 2738541284 2738760970 425
32 iso_pu_bacteria 2738541302 2738855123 425
33 iso_pu_bacteria 2739367651 2739588619 425
34 iso_pu_bacteria 2739367656 2739615887 425
35 iso_pu_bacteria 2739367663 2739644977 425
36 iso_pu_bacteria 2775506987 2776613157 425
37 iso_pu_bacteria 2818991437 2819548131 425
38 iso_pu_bacteria 2842722452 2842723755 425
39 iso_pu_bacteria 2842909656 2842910261 425
40 iso_pu_bacteria 2849281842 2849284283 425
41 iso_pu_bacteria 2852623160 2852626933 425
42 iso_pu_bacteria 2857627736 2857628918 425
43 iso_pu_bacteria 2884933994 2884938015 425
44 iso_pu_bacteria 2904445276 2904445687 425
45 iso_pu_bacteria 2945997725 2946000615 425
46 iso_pu_bacteria 2954016120 2954017497 425
47 3300031251 Ga0265327_10008108 Ga0265327_100081087 426
48 3300031344 Ga0265316_10000125 Ga0265316_100001257 426
49 3300031251 Ga0265327_10046539 Ga0265327_100465391 427
50 3300039062 Ga0400483_039080 Ga0400483_039080_324_1616 427
51 3300045051 Ga0451576_0008456 Ga0451576_0008456_7845_9188 427
52 3300001989 JGI24739J22299_10015610 JGI24739J22299_100156103 428
53 3300001990 JGI24737J22298_10000143 JGI24737J22298_1000014319 428
54 3300002067 JGI24735J21928_10000006 JGI24735J21928_10000006274 428
55 3300002067 JGI24735J21928_10008387 JGI24735J21928_100083875 428
56 3300002737 JGI25162J39368_1000089 JGI25162J39368_100008968 428
57 3300002737 JGI25162J39368_1000498 JGI25162J39368_10004984 428
58 3300003214 JGI25165J46597_1000618 JGI25165J46597_100061824 428
59 3300003316 rootH1_10016978 rootH1_1001697822 428
60 3300003316 rootH1_10033123 rootH1_100331234 428
61 3300003320 rootH2_10029927 rootH2_100299275 428
62 3300003320 rootH2_10058912 rootH2_100589126 428
63 3300003322 rootL2_10010208 rootL2_100102089 428
64 3300003323 rootH1_10010194 rootH1_1001019434 428
65 3300003323 rootH1_10042827 rootH1_100428273 428
66 3300003323 rootH1_10086739 rootH1_100867392 428
67 3300003794 Ga0055531_10000359 Ga0055531_1000035935 428
68 3300004799 Ga0058863_10077767 Ga0058863_100777672 428
69 3300004800 Ga0058861_11949258 Ga0058861_119492581 428
70 3300005288 Ga0065714_10065485 Ga0065714_100654857 428
71 3300005288 Ga0065714_10114653 Ga0065714_101146531 428
72 3300005327 Ga0070658_10000018 Ga0070658_10000018131 428
73 3300005329 Ga0070683_100130999 Ga0070683_1001309991 428
74 3300005339 Ga0070660_100003099 Ga0070660_1000030992 428
75 3300005366 Ga0070659_100000682 Ga0070659_10000068225 428
76 3300005366 Ga0070659_100004029 Ga0070659_1000040299 428
77 3300005530 Ga0070679_100025461 Ga0070679_1000254611 428
78 3300005563 Ga0068855_100000070 Ga0068855_10000007077 428
79 3300005563 Ga0068855_100032544 Ga0068855_1000325442 428
80 3300005577 Ga0068857_100014295 Ga0068857_1000142952 428
81 3300005614 Ga0068856_100000899 Ga0068856_10000089916 428
82 3300005614 Ga0068856_100009016 Ga0068856_10000901612 428
83 3300005618 Ga0068864_100137427 Ga0068864_1001374273 428
84 3300006195 Ga0075366_10006624 Ga0075366_100066242 428
85 3300006844 Ga0075428_100015368 Ga0075428_1000153684 428
86 3300009093 Ga0105240_10000237 Ga0105240_1000023770 428
87 3300009093 Ga0105240_10048249 Ga0105240_100482493 428
88 3300009093 Ga0105240_10127504 Ga0105240_101275042 428
89 3300009094 Ga0111539_10011414 Ga0111539_100114146 428
90 3300009545 Ga0105237_10000589 Ga0105237_1000058912 428
91 3300009545 Ga0105237_10050437 Ga0105237_100504372 428
92 3300010375 Ga0105239_10000120 Ga0105239_10000120101 428
93 3300010375 Ga0105239_10001382 Ga0105239_100013824 428
94 3300010375 Ga0105239_10005501 Ga0105239_1000550112 428
95 3300010375 Ga0105239_10005560 Ga0105239_100055602 428
96 3300010375 Ga0105239_10019055 Ga0105239_100190552 428
97 3300013100 Ga0157373_10000337 Ga0157373_1000033716 428
98 3300013100 Ga0157373_10002034 Ga0157373_100020344 428
99 3300013100 Ga0157373_10137482 Ga0157373_101374821 428
100 3300013102 Ga0157371_10000251 Ga0157371_1000025112 428
101 3300013102 Ga0157371_10038934 Ga0157371_100389343 428
102 3300013104 Ga0157370_10051970 Ga0157370_100519704 428
103 3300013104 Ga0157370_10058355 Ga0157370_100583552 428
104 3300013105 Ga0157369_10057722 Ga0157369_100577222 428
105 3300013105 Ga0157369_10097709 Ga0157369_100977092 428
106 3300013105 Ga0157369_10126520 Ga0157369_101265202 428
107 3300013296 Ga0157374_10172570 Ga0157374_101725702 428
108 3300013306 Ga0163162_10002280 Ga0163162_1000228012 428
109 3300013306 Ga0163162_10048068 Ga0163162_100480682 428
110 3300013307 Ga0157372_10000050 Ga0157372_10000050124 428
111 3300013307 Ga0157372_10000266 Ga0157372_1000026623 428
112 3300013307 Ga0157372_10002755 Ga0157372_1000275515 428
113 3300013307 Ga0157372_10021260 Ga0157372_100212605 428
114 3300013307 Ga0157372_10031266 Ga0157372_100312665 428
115 3300014497 Ga0182008_10006790 Ga0182008_100067905 428
116 3300015261 Ga0182006_1006813 Ga0182006_10068134 428
117 3300015262 Ga0182007_10003351 Ga0182007_100033514 428
118 3300017792 Ga0163161_10000762 Ga0163161_1000076219 428
119 3300017792 Ga0163161_10002308 Ga0163161_100023081 428
120 3300017792 Ga0163161_10028243 Ga0163161_100282432 428
121 3300025231 Ga0207427_100359 Ga0207427_10035911 428
122 3300025233 Ga0209437_100034 Ga0209437_100034194 428
123 3300025233 Ga0209437_100221 Ga0209437_10022139 428
124 3300025250 Ga0209026_1000383 Ga0209026_100038317 428
125 3300025250 Ga0209026_1000828 Ga0209026_10008287 428
126 3300025261 Ga0209233_1000038 Ga0209233_1000038194 428
127 3300025261 Ga0209233_1009684 Ga0209233_10096842 428
128 3300025261 Ga0209233_1013515 Ga0209233_10135152 428
129 3300025298 Ga0209050_1008287 Ga0209050_10082874 428
130 3300025304 Ga0209257_1000005 Ga0209257_10000051060 428
131 3300025904 Ga0207647_10000662 Ga0207647_100006625 428
132 3300025904 Ga0207647_10071889 Ga0207647_100718892 428
133 3300025909 Ga0207705_10000036 Ga0207705_1000003663 428
134 3300025911 Ga0207654_10003904 Ga0207654_100039045 428
135 3300025911 Ga0207654_10114982 Ga0207654_101149821 428
136 3300025913 Ga0207695_10000013 Ga0207695_1000001371 428
137 3300025913 Ga0207695_10002976 Ga0207695_100029767 428
138 3300025913 Ga0207695_10107313 Ga0207695_101073132 428
139 3300025914 Ga0207671_10000272 Ga0207671_1000027250 428
140 3300025914 Ga0207671_10010985 Ga0207671_100109857 428
141 3300025914 Ga0207671_10015584 Ga0207671_100155843 428
142 3300025917 Ga0207660_10003963 Ga0207660_100039632 428
143 3300025919 Ga0207657_10045633 Ga0207657_100456332 428
144 3300025932 Ga0207690_10005322 Ga0207690_100053224 428
145 3300025935 Ga0207709_10000008 Ga0207709_1000000853 428
146 3300025944 Ga0207661_10160884 Ga0207661_101608842 428
147 3300025949 Ga0207667_10000009 Ga0207667_10000009435 428
148 3300025949 Ga0207667_10008541 Ga0207667_100085412 428
149 3300025949 Ga0207667_10021526 Ga0207667_100215268 428
150 3300025949 Ga0207667_10031481 Ga0207667_100314813 428
151 3300025949 Ga0207667_10083626 Ga0207667_100836262 428
152 3300026078 Ga0207702_10000507 Ga0207702_1000050714 428
153 3300026078 Ga0207702_10053646 Ga0207702_100536463 428
154 3300026078 Ga0207702_10154329 Ga0207702_101543291 428
155 3300026095 Ga0207676_10182432 Ga0207676_101824322 428
156 3300026116 Ga0207674_10066545 Ga0207674_100665454 428
157 3300028794 Ga0307515_10001481 Ga0307515_100014819 428
158 3300030732 Ga0316176_1181288 Ga0316176_11812883 428
159 3300030742 Ga0316183_1111157 Ga0316183_11111574 428
160 3300031548 Ga0307408_100000162 Ga0307408_10000016255 428
161 3300031548 Ga0307408_100000481 Ga0307408_1000004817 428
162 3300031548 Ga0307408_100036816 Ga0307408_1000368163 428
163 3300031911 Ga0307412_10052036 Ga0307412_100520361 428
164 3300032004 Ga0307414_10000028 Ga0307414_1000002886 428
165 3300032004 Ga0307414_10003864 Ga0307414_100038647 428
166 3300032004 Ga0307414_10008019 Ga0307414_100080193 428
167 3300032004 Ga0307414_10036786 Ga0307414_100367863 428
168 3300032004 Ga0307414_10090960 Ga0307414_100909603 428
169 3300032004 Ga0307414_10097523 Ga0307414_100975232 428
170 3300032005 Ga0307411_10000912 Ga0307411_1000091210 428
171 3300033179 Ga0307507_10000345 Ga0307507_1000034545 428
172 3300035695 Ga0373927_0010342 Ga0373927_0010342_4586_5872 428
173 3300037312 Ga0395899_0000002 Ga0395899_0000002_1089412_1090698 428
174 3300037312 Ga0395899_0000659 Ga0395899_0000659_18008_19294 428
175 3300037312 Ga0395899_0010383 Ga0395899_0010383_3131_4417 428
176 3300037418 Ga0395900_0001002 Ga0395900_0001002_1792_3078 428
177 3300037418 Ga0395900_0015663 Ga0395900_0015663_1845_3131 428
178 3300037418 Ga0395900_0173211 Ga0395900_0173211_773_2059 428
179 3300037466 Ga0395898_0053032 Ga0395898_0053032_1703_2989 428
180 3300037471 Ga0395905_0004443 Ga0395905_0004443_8547_9833 428
181 3300038443 Ga0395901_0024088 Ga0395901_0024088_3036_4322 428
182 3300042876 Ga0451577_0000400 Ga0451577_0000400_8733_10019 428
183 3300042876 Ga0451577_0035518 Ga0451577_0035518_2356_3642 428
184 3300044684 Ga0466966_0003977 Ga0466966_0003977_6658_7944 428
185 3300044712 Ga0453684_0003678 Ga0453684_0003678_8623_9909 428
186 3300044712 Ga0453684_0004157 Ga0453684_0004157_28397_29701 428
187 3300045049 Ga0466959_0091686 Ga0466959_0091686_681_1967 428
188 3300045051 Ga0451576_0050403 Ga0451576_0050403_1844_3130 428
189 3300045836 Ga0466958_0006251 Ga0466958_0006251_3696_4982 428
190 3300046460 Ga0495638_0000015 Ga0495638_0000015_318061_319347 428
191 3300046471 Ga0495650_0000132 Ga0495650_0000132_38714_40000 428
192 3300046492 Ga0495585_0000093 Ga0495585_0000093_85830_87116 428
193 3300046492 Ga0495585_0001039 Ga0495585_0001039_2777_4063 428
194 3300046506 Ga0495583_0022449 Ga0495583_0022449_23_1309 428
195 3300046507 Ga0495606_0002127 Ga0495606_0002127_6135_7421 428
196 3300046507 Ga0495606_0027655 Ga0495606_0027655_1439_2725 428
197 3300046507 Ga0495606_0028709 Ga0495606_0028709_2301_3587 428
198 3300046513 Ga0495616_0001271 Ga0495616_0001271_5242_6528 428
199 3300046513 Ga0495616_0009308 Ga0495616_0009308_3101_4387 428
200 3300046524 Ga0495648_0006170 Ga0495648_0006170_2595_3881 428
201 3300046558 Ga0495633_0000035 Ga0495633_0000035_96115_97401 428
202 3300046616 Ga0495668_0000032 Ga0495668_0000032_104902_106188 428
203 3300046660 Ga0495625_0000036 Ga0495625_0000036_128397_129683 428
204 3300046660 Ga0495625_0000227 Ga0495625_0000227_48_1334 428
205 3300046660 Ga0495625_0020461 Ga0495625_0020461_2531_3817 428
206 3300046660 Ga0495625_0025632 Ga0495625_0025632_984_2270 428
207 3300046660 Ga0495625_0051632 Ga0495625_0051632_48_1334 428
208 3300046665 Ga0495661_0000707 Ga0495661_0000707_18850_20136 428
209 3300046694 Ga0495649_0000017 Ga0495649_0000017_92033_93319 428
210 3300046810 Ga0495660_0019102 Ga0495660_0019102_2439_3725 428
211 3300047443 Ga0495687_031608 Ga0495687_031608_148_1434 428
212 3300047472 Ga0495686_0002391 Ga0495686_0002391_8551_9837 428
213 3300047472 Ga0495686_0061036 Ga0495686_0061036_990_2276 428
214 3300048919 Ga0496116_0019307 Ga0496116_0019307_115_1401 428
215 3300048920 Ga0496117_0011593 Ga0496117_0011593_1799_3085 428
216 3300048925 Ga0496122_0003440 Ga0496122_0003440_11848_13134 428
217 3300048926 Ga0496123_0012746 Ga0496123_0012746_994_2280 428
218 3300049539 Ga0501323_003216 Ga0501323_003216_170_1456 428
219 3300049661 Ga0501217_002509 Ga0501217_002509_469_1755 428
220 3300049758 Ga0501241_000211 Ga0501241_000211_7690_8976 428
221 3300049761 Ga0501264_000447 Ga0501264_000447_156_1442 428
222 3300050493 nmdc:mga0k408_386_c1 nmdc:mga0k408_386_c1_10730_12016 428
223 3300050493 nmdc:mga0k408_420_c1 nmdc:mga0k408_420_c1_17101_18387 428
224 3300050511 nmdc:mga08y16_8156_c1 nmdc:mga08y16_8156_c1_8852_10138 428
225 3300053080 Ga0500635_0002163 Ga0500635_0002163_1264_2550 428
226 3300053125 Ga0500618_000003 Ga0500618_000003_23472_24758 428
227 3300053153 Ga0500616_0000043 Ga0500616_0000043_115475_116761 428
228 3300053156 Ga0500622_0001867 Ga0500622_0001867_336_1622 428
229 3300053157 Ga0500624_000571 Ga0500624_000571_4218_5504 428
230 2162886007 SwRhRL2b_contig_1411852 SwRhRL2b_0097.00004840 429
231 3300001990 JGI24737J22298_10020979 JGI24737J22298_100209791 429
232 3300002773 JGI25152J39213_1000352 JGI25152J39213_10003521 429
233 3300002774 JGI25150J39212_1000019 JGI25150J39212_10000192 429
234 3300003187 JGI25151J46595_10000074 JGI25151J46595_100000742 429
235 3300003215 JGI25153J46596_10000056 JGI25153J46596_100000562 429
236 3300003320 rootH2_10018591 rootH2_1001859124 429
237 3300003322 rootL2_10079161 rootL2_100791613 429
238 3300003323 rootH1_10017455 rootH1_100174554 429
239 3300003323 rootH1_10065583 rootH1_100655834 429
240 3300003781 Ga0055536_1000011 Ga0055536_1000011181 429
241 3300003791 Ga0055530_10001506 Ga0055530_1000150610 429
242 3300005288 Ga0065714_10002212 Ga0065714_1000221238 429
243 3300005288 Ga0065714_10002244 Ga0065714_1000224436 429
244 3300005288 Ga0065714_10066579 Ga0065714_100665796 429
245 3300005288 Ga0065714_10072211 Ga0065714_100722113 429
246 3300005289 Ga0065704_10000193 Ga0065704_1000019336 429
247 3300005289 Ga0065704_10108282 Ga0065704_101082821 429
248 3300005328 Ga0070676_10000642 Ga0070676_100006427 429
249 3300005338 Ga0068868_100008511 Ga0068868_1000085115 429
250 3300005339 Ga0070660_100282903 Ga0070660_1002829031 429
251 3300005364 Ga0070673_100011170 Ga0070673_1000111703 429
252 3300005456 Ga0070678_100027246 Ga0070678_1000272463 429
253 3300005457 Ga0070662_100000225 Ga0070662_1000002253 429
254 3300005459 Ga0068867_100000952 Ga0068867_10000095210 429
255 3300005548 Ga0070665_100000072 Ga0070665_10000007291 429
256 3300005563 Ga0068855_100023407 Ga0068855_1000234073 429
257 3300005616 Ga0068852_100007797 Ga0068852_1000077974 429
258 3300005718 Ga0068866_10035905 Ga0068866_100359052 429
259 3300005840 Ga0068870_10020059 Ga0068870_100200592 429
260 3300006237 Ga0097621_100000878 Ga0097621_1000008789 429
261 3300006358 Ga0068871_100008203 Ga0068871_1000082034 429
262 3300006881 Ga0068865_100000127 Ga0068865_1000001279 429
263 3300009093 Ga0105240_10013007 Ga0105240_100130075 429
264 3300009148 Ga0105243_10172829 Ga0105243_101728292 429
265 3300009174 Ga0105241_10004192 Ga0105241_100041926 429
266 3300009176 Ga0105242_10014993 Ga0105242_100149933 429
267 3300009545 Ga0105237_10000485 Ga0105237_1000048553 429
268 3300009545 Ga0105237_10001308 Ga0105237_1000130819 429
269 3300009545 Ga0105237_10007484 Ga0105237_100074843 429
270 3300009545 Ga0105237_10011904 Ga0105237_100119046 429
271 3300009551 Ga0105238_10015399 Ga0105238_100153993 429
272 3300010375 Ga0105239_10000039 Ga0105239_10000039167 429
273 3300010375 Ga0105239_10007831 Ga0105239_100078317 429
274 3300013100 Ga0157373_10000121 Ga0157373_1000012137 429
275 3300013100 Ga0157373_10079420 Ga0157373_100794201 429
276 3300013102 Ga0157371_10000009 Ga0157371_10000009340 429
277 3300013102 Ga0157371_10000426 Ga0157371_100004266 429
278 3300013102 Ga0157371_10002317 Ga0157371_1000231713 429
279 3300013104 Ga0157370_10002315 Ga0157370_1000231510 429
280 3300013104 Ga0157370_10008288 Ga0157370_1000828811 429
281 3300013104 Ga0157370_10011991 Ga0157370_100119916 429
282 3300013105 Ga0157369_10000460 Ga0157369_100004606 429
283 3300013296 Ga0157374_10005503 Ga0157374_100055032 429
284 3300013306 Ga0163162_10000010 Ga0163162_1000001038 429
285 3300013306 Ga0163162_10000177 Ga0163162_1000017730 429
286 3300013307 Ga0157372_10134194 Ga0157372_101341942 429
287 3300013308 Ga0157375_10005903 Ga0157375_100059033 429
288 3300014326 Ga0157380_10010041 Ga0157380_100100414 429
289 3300014497 Ga0182008_10000018 Ga0182008_10000018165 429
290 3300014497 Ga0182008_10000378 Ga0182008_1000037817 429
291 3300014497 Ga0182008_10000592 Ga0182008_100005922 429
292 3300015261 Ga0182006_1000382 Ga0182006_10003824 429
293 3300015261 Ga0182006_1000622 Ga0182006_100062214 429
294 3300015261 Ga0182006_1002627 Ga0182006_10026279 429
295 3300015261 Ga0182006_1016726 Ga0182006_10167262 429
296 3300015262 Ga0182007_10000001 Ga0182007_10000001315 429
297 3300015682 Ga0183373_1006 Ga0183373_1006185 429
298 3300017792 Ga0163161_10001631 Ga0163161_100016316 429
299 3300017792 Ga0163161_10041948 Ga0163161_100419483 429
300 3300025245 Ga0207425_1000007 Ga0207425_1000007317 429
301 3300025258 Ga0209129_1000006 Ga0209129_1000006317 429
302 3300025292 Ga0209676_1000001 Ga0209676_1000001773 429
303 3300025294 Ga0209025_1000025 Ga0209025_1000025147 429
304 3300025297 Ga0209758_1000016 Ga0209758_1000016317 429
305 3300025298 Ga0209050_1000016 Ga0209050_1000016438 429
306 3300025904 Ga0207647_10001962 Ga0207647_1000196212 429
307 3300025907 Ga0207645_10001724 Ga0207645_100017249 429
308 3300025909 Ga0207705_10124773 Ga0207705_101247731 429
309 3300025911 Ga0207654_10014278 Ga0207654_100142783 429
310 3300025913 Ga0207695_10004800 Ga0207695_100048002 429
311 3300025913 Ga0207695_10015831 Ga0207695_100158314 429
312 3300025914 Ga0207671_10002624 Ga0207671_1000262413 429
313 3300025914 Ga0207671_10006239 Ga0207671_1000623910 429
314 3300025914 Ga0207671_10016827 Ga0207671_100168274 429
315 3300025914 Ga0207671_10029846 Ga0207671_100298463 429
316 3300025919 Ga0207657_10106681 Ga0207657_101066812 429
317 3300025924 Ga0207694_10027710 Ga0207694_100277103 429
318 3300025931 Ga0207644_10054509 Ga0207644_100545093 429
319 3300025933 Ga0207706_10000317 Ga0207706_1000031742 429
320 3300025935 Ga0207709_10105071 Ga0207709_101050711 429
321 3300025938 Ga0207704_10000044 Ga0207704_1000004426 429
322 3300025960 Ga0207651_10007665 Ga0207651_100076652 429
323 3300026023 Ga0207677_10046870 Ga0207677_100468702 429
324 3300026023 Ga0207677_10064138 Ga0207677_100641382 429
325 3300026041 Ga0207639_10035907 Ga0207639_100359073 429
326 3300026089 Ga0207648_10002139 Ga0207648_100021399 429
327 3300026121 Ga0207683_10051262 Ga0207683_100512622 429
328 3300028379 Ga0268266_10000089 Ga0268266_1000008989 429
329 3300028786 Ga0307517_10003551 Ga0307517_100035517 429
330 3300031548 Ga0307408_100003496 Ga0307408_1000034967 429
331 3300031731 Ga0307405_10000010 Ga0307405_1000001032 429
332 3300031903 Ga0307407_10000042 Ga0307407_1000004229 429
333 3300031911 Ga0307412_10000077 Ga0307412_1000007753 429
334 3300031995 Ga0307409_100128027 Ga0307409_1001280271 429
335 3300032002 Ga0307416_100000216 Ga0307416_10000021629 429
336 3300032004 Ga0307414_10002866 Ga0307414_100028664 429
337 3300032004 Ga0307414_10008173 Ga0307414_100081731 429
338 3300033180 Ga0307510_10002378 Ga0307510_1000237814 429
339 3300035398 Ga0316574_0051796 Ga0316574_0051796_530_1828 429
340 3300036712 Ga0316584_0075524 Ga0316584_0075524_134_1504 429
341 3300037312 Ga0395899_0000532 Ga0395899_0000532_39622_40950 429
342 3300037418 Ga0395900_0000277 Ga0395900_0000277_16709_18037 429
343 3300037466 Ga0395898_0009131 Ga0395898_0009131_4289_5617 429
344 3300037471 Ga0395905_0000068 Ga0395905_0000068_73229_74557 429
345 3300037471 Ga0395905_0034783 Ga0395905_0034783_2753_4045 429
346 3300038443 Ga0395901_0000136 Ga0395901_0000136_4236_5564 429
347 3300039447 Ga0436361_0648730 Ga0436361_0648730_2353_3642 429
348 3300042876 Ga0451577_0004933 Ga0451577_0004933_2851_4140 429
349 3300044673 Ga0453683_0003960 Ga0453683_0003960_3871_5160 429
350 3300044712 Ga0453684_0010355 Ga0453684_0010355_4047_5336 429
351 3300044712 Ga0453684_0045655 Ga0453684_0045655_3276_4574 429
352 3300044712 Ga0453684_0092625 Ga0453684_0092625_1027_2316 429
353 3300046462 Ga0495651_0017658 Ga0495651_0017658_3240_4529 429
354 3300046512 Ga0495610_0000035 Ga0495610_0000035_12035_13324 429
355 3300046512 Ga0495610_0004910 Ga0495610_0004910_8356_9645 429
356 3300046518 Ga0495631_0005611 Ga0495631_0005611_4046_5374 429
357 3300047443 Ga0495687_009998 Ga0495687_009998_1967_3295 429
358 3300048925 Ga0496122_0000746 Ga0496122_0000746_28695_29984 429
359 3300048926 Ga0496123_0021701 Ga0496123_0021701_1480_2769 429
360 3300049568 Ga0501031_0001267 Ga0501031_0001267_3230_4684 429
361 3300049569 Ga0501032_0001181 Ga0501032_0001181_14645_16099 429
362 3300049569 Ga0501032_0002515 Ga0501032_0002515_10567_11856 429
363 3300049570 Ga0501033_0000028 Ga0501033_0000028_766_2055 429
364 3300049571 Ga0501034_0000074 Ga0501034_0000074_141697_143151 429
365 3300049572 Ga0501036_0037806 Ga0501036_0037806_1590_3044 429
366 3300049573 Ga0501037_0005483 Ga0501037_0005483_5853_7307 429
367 3300049574 Ga0501038_0008168 Ga0501038_0008168_7913_9367 429
368 3300049575 Ga0501039_0014441 Ga0501039_0014441_1892_3346 429
369 3300049579 Ga0501043_0002023 Ga0501043_0002023_7492_8946 429
370 3300049663 Ga0501223_000674 Ga0501223_000674_6398_7687 429
371 3300049823 Ga0501044_0001547 Ga0501044_0001547_1809_3263 429
372 3300049824 Ga0501045_0014087 Ga0501045_0014087_2359_3813 429
373 3300050511 nmdc:mga08y16_10405_c1 nmdc:mga08y16_10405_c1_6148_7446 429
374 3300053093 Ga0500651_0000127 Ga0500651_0000127_19440_20729 429
375 3300053122 Ga0500608_004946 Ga0500608_004946_1060_2349 429

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00285

Citrate_synt

Citrate synthase, C-terminal domain

12

377

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ixe-assembly2.cif.gz_C crystal structure of citrate synthase from thermus thermophilus hb8 0.8726 34 428
1a59-assembly1.cif.gz_A-2 cold-active citrate synthase 0.8706 54 423
1ixe-assembly2.cif.gz_D crystal structure of citrate synthase from thermus thermophilus hb8 0.8686 34 428
1ixe-assembly2.cif.gz_C crystal structure of citrate synthase from thermus thermophilus hb8 0.8658 34 428
2p2w-assembly1.cif.gz_A-2 crystal structure of citrate synthase from thermotoga maritima msb8 0.8656 54 429
ID Description Score Start End Superfamily
1ixeD01 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.9256 52 267 1.10.580.10
3hwkC01 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.9254 54 267 1.10.580.10
6abxB01 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.9206 54 407 1.10.580.10
4xghA02 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.918 54 413 1.10.580.10
2c6xA01 Mainly Alpha;Orthogonal Bundle;Citrate Synthase; domain 1;Citrate Synthase, domain 1 0.9178 54 266 1.10.580.10
ID Description Score Start End GO Terms
AF-A0A3D3PE03-F1-model_v4 Citrate (Si)-synthase (EC 2.3.3.1) 0.9723 116 215 GO:0004108
AF-A0A140GL83-F1-model_v4 Citrate synthase 0.9678 56 226 GO:0046912
AF-A0A7V8A9S1-F1-model_v4 Citrate synthase 0.9657 69 215 GO:0046912
AF-A0A378BT05-F1-model_v4 Citrate synthase (Si) (EC 2.3.3.1) 0.9643 84 214 GO:0004108
AF-A0A434L6W0-F1-model_v4 Citrate (Si)-synthase (EC 2.3.3.1) 0.9629 91 219 GO:0004108

Feature Viewer

pLDDT pTM Quality
85.63 0.86 High
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Predicted Structure (AlphaFold2)

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