F425900

General Info

Members Datasets Scaffolds Average Seq Length
371 275 282 589

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2932431166|2932433509
Length 623
Sequence TSGAPAAASTRVRGADLLRLSTLFVRTLREDPADAEVASHRLLVRAGYIRRAAPGIYTWLPLGLRVLRKVEDVVREEMAAAGAQEVHFPALLPKEPYEATGRWTEYGPNIFRLKDRKDGDYLLAPTHEEMFTLLVKDLYSSYKDLPLTIYQIQTKYRDEARPRAGLIRGREFVMKDAYSFDTTDEGLERSYEAQRAAYRRIFDRLGLEYVIVAATSGAMGGSRSEEFLTPTAIGEDTFVRSPGGYAANVEAVVTPVPEAVDYADAPAAHVEDTPDTPTIASLVELANARYPRADRAWTAADTLKNVVLALTHPDGRREVVVVGLPGDREVDLKRVGAAFEPAEVEPATDADFAAHPELVKGYIGPQVLGPNARREGPADGDASDESAGETPERHSVRYLLDPRVVAGTRWITGANAPGRHVFDLVAERDFAADGTVEAAEVRAGDLAPDGSGPLELARGIEIGHIFALGRKYAQALGLTVLDENGKQVVVTMGSYGIGVTRVLAALAEANHDDAGLAWPAHVAPAHVHVVATGKDASVFEEAERLATELAGRGVEVIYDDRPKVSPGVKFKDAELLGVPLLLVVGRGLADGVVEVRPRAGEAAQVAVADAVEHVAGRVAELLG

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
3 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
4 2643221604 Nocardioides sp. Root190 Isolate Unclassified
5 2643221613 Oerskovia sp. Root22 Isolate Unclassified
6 2643221617 Nocardioides sp. Root79 Isolate Unclassified
7 2643221620 Nocardioides sp. Root240 Isolate Unclassified
8 2643221679 Angustibacter sp. Root456 Isolate Unclassified
9 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
10 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
11 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
12 2643221721 Oerskovia sp. Root918 Isolate Unclassified
13 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
14 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
15 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
16 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
17 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
18 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
19 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
20 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
21 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
22 2739367653 Kocuria sp. OV113 Isolate Unclassified
23 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
24 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
25 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
26 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
27 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
28 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
29 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
30 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
31 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
32 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
33 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
34 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
35 2808606394 Promicromonospora sp. C35 Isolate Unclassified
36 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
37 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
38 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
39 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
40 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
41 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
42 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
43 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
44 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
45 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
46 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
47 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
48 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
49 2857727296 Kocuria sp. R-72562 Isolate Unclassified
50 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
51 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
52 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
53 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
54 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
55 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
56 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
57 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
58 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
59 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
60 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
61 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
62 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
63 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
64 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
65 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
66 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
67 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
68 2920879853 Kocuria salina CV6 Isolate Unclassified
69 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
70 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
71 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
72 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
73 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
74 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
75 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
76 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
77 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
78 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
79 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
80 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
81 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
82 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
83 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
84 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
85 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
86 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
87 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
88 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
89 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
90 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
91 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
92 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
93 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
94 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
95 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
96 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
97 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
98 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
99 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
100 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
101 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
102 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
103 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
104 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
105 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
106 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
107 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
108 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
109 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
110 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
111 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
112 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
113 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
114 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
115 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
116 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
117 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
118 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
119 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
120 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
121 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
122 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
123 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
124 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
125 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
126 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
127 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
128 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
129 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
130 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
131 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
132 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
133 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
134 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
135 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
136 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
137 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
138 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
139 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
140 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
157 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
158 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
159 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
160 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
161 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
162 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
163 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
164 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
165 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
166 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
167 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
168 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
169 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
170 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
171 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
172 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
173 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
174 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
175 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
176 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
177 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
178 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
179 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
180 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
181 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
182 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
183 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
184 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
185 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
186 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
187 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
188 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
189 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
190 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
191 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
192 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
193 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
194 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
195 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
196 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
197 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
198 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
199 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
200 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
201 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
202 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
203 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
204 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
205 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
206 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
207 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
208 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
209 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
210 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
211 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
212 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
213 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
214 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
215 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
216 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
217 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
218 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
219 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
220 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
221 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
222 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
223 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
224 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
225 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
226 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
227 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
228 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
229 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
230 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
231 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
232 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
233 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
234 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
235 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
236 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
237 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
238 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
239 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
240 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
241 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
242 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
243 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
244 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
245 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
246 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
247 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
248 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
249 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
250 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
251 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
252 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
253 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
254 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
255 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
256 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
257 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
258 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
259 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
260 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
261 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
262 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
263 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
264 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
265 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
266 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
267 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
268 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
269 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
270 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
271 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
272 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
273 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
274 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
275 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.74
Metatranscriptomes 0.27
Isolates 23.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.04
Nodule 0
Rhizoplane 2.7
Rhizosphere 76.01
Stem 0
Stem Tuber 0
Unclassified 17.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1001113 3300000549 Bacteria 4083
2 JGI25152J39213_1000627 3300002773 Bacteria 18726
3 JGI25406J46586_10017920 3300003203 Bacteria 2918
4 Ga0070676_10007842 3300005328 Bacteria 5739
5 Ga0070683_100047244 3300005329 Bacteria 3977
6 Ga0070682_100038933 3300005337 Bacteria 2919
7 Ga0070668_100079962 3300005347 Bacteria 2560
8 Ga0070669_100044877 3300005353 Bacteria 3220
9 Ga0070674_100056372 3300005356 Bacteria 2725
10 Ga0070659_100022978 3300005366 Bacteria 4768
11 Ga0070659_100030347 3300005366 Bacteria 4184
12 Ga0070667_100022116 3300005367 Bacteria 5274
13 Ga0070667_100120992 3300005367 Bacteria 2277
14 Ga0070700_100002130 3300005441 Bacteria 10039
15 Ga0070662_100004191 3300005457 Bacteria 9088
16 Ga0068867_100011833 3300005459 Bacteria 6163
17 Ga0070684_100003936 3300005535 Bacteria 11251
18 Ga0070684_100186063 3300005535 Bacteria 1889
19 Ga0068856_100003051 3300005614 Bacteria 17138
20 Ga0068866_10003850 3300005718 Bacteria 6160
21 Ga0068861_100012297 3300005719 Bacteria 5970
22 Ga0068870_10024203 3300005840 Bacteria 3003
23 Ga0068860_100030710 3300005843 Bacteria 5167
24 Ga0081455_10001480 3300005937 Bacteria 29049
25 Ga0081455_10029521 3300005937 Bacteria 5000
26 Ga0081455_10068936 3300005937 Bacteria 2943
27 Ga0081538_10000448 3300005981 Bacteria 46350
28 Ga0081539_10000314 3300005985 Bacteria 108451
29 Ga0081539_10000846 3300005985 Bacteria 58555
30 Ga0081539_10023287 3300005985 Bacteria 4062
31 Ga0075365_10016834 3300006038 Bacteria 4460
32 Ga0075363_100000512 3300006048 Bacteria 12430
33 Ga0075364_10003897 3300006051 Bacteria 8554
34 Ga0075432_10000034 3300006058 Bacteria 25209
35 Ga0075432_10001167 3300006058 Bacteria 8413
36 Ga0075428_100161432 3300006844 Bacteria 2433
37 Ga0075430_100015537 3300006846 Bacteria 6482
38 Ga0075433_10000261 3300006852 Bacteria 30721
39 Ga0075433_10003937 3300006852 Bacteria 11498
40 Ga0075434_100006891 3300006871 Bacteria 10466
41 Ga0075429_100007255 3300006880 Bacteria 9617
42 Ga0075436_100003930 3300006914 Bacteria 10186
43 Ga0105251_10010698 3300009011 Bacteria 5296
44 Ga0105244_10006960 3300009036 Bacteria 7240
45 Ga0105244_10020819 3300009036 Bacteria 3636
46 Ga0111539_10000342 3300009094 Bacteria 57280
47 Ga0105245_10002018 3300009098 Bacteria 18403
48 Ga0105245_10015536 3300009098 Bacteria 6639
49 Ga0114129_10018301 3300009147 Bacteria 9979
50 Ga0114129_10020083 3300009147 Bacteria 9508
51 Ga0105243_10048016 3300009148 Bacteria 3364
52 Ga0105242_10007768 3300009176 Bacteria 8251
53 Ga0105248_10084375 3300009177 Bacteria 3573
54 Ga0105238_10008019 3300009551 Bacteria 10564
55 Ga0105249_10063568 3300009553 Bacteria 3391
56 Ga0105249_10075573 3300009553 Bacteria 3120
57 Ga0105028_101619 3300009993 Bacteria 2360
58 Ga0105246_10006712 3300011119 Bacteria 7037
59 Ga0105246_10010509 3300011119 Bacteria 5730
60 Ga0105246_10050232 3300011119 Bacteria 2860
61 Ga0157373_10070146 3300013100 Bacteria 2476
62 Ga0157371_10043031 3300013102 Bacteria 3218
63 Ga0157370_10006020 3300013104 Bacteria 13493
64 Ga0157369_10034905 3300013105 Bacteria 5516
65 Ga0157369_10063689 3300013105 Bacteria 3972
66 Ga0163162_10089603 3300013306 Bacteria 3157
67 Ga0157372_10008730 3300013307 Bacteria 10761
68 Ga0157372_10097615 3300013307 Bacteria 3351
69 Ga0163163_10097345 3300014325 Bacteria 2963
70 Ga0182008_10018406 3300014497 Bacteria 3617
71 Ga0209129_1000079 3300025258 Bacteria 187308
72 Ga0209025_1000458 3300025294 Bacteria 79809
73 Ga0207697_10009750 3300025315 Bacteria 4134
74 Ga0207655_1011861 3300025728 Bacteria 5146
75 Ga0207655_1016010 3300025728 Bacteria 4130
76 Ga0207688_10033996 3300025901 Bacteria 2822
77 Ga0207688_10045358 3300025901 Bacteria 2452
78 Ga0207643_10004812 3300025908 Bacteria 7231
79 Ga0207659_10060220 3300025926 Bacteria 2732
80 Ga0207706_10003981 3300025933 Bacteria 14002
81 Ga0207709_10021914 3300025935 Bacteria 3620
82 Ga0207669_10093946 3300025937 Bacteria 1961
83 Ga0207704_10014703 3300025938 Bacteria 3962
84 Ga0207691_10000777 3300025940 Bacteria 31597
85 Ga0207691_10004639 3300025940 Bacteria 13304
86 Ga0207668_10065012 3300025972 Bacteria 2580
87 Ga0207639_10127694 3300026041 Bacteria 2100
88 Ga0207708_10000867 3300026075 Bacteria 22787
89 Ga0207648_10008372 3300026089 Bacteria 10026
90 Ga0207675_100005412 3300026118 Bacteria 12230
91 Ga0207683_10004157 3300026121 Bacteria 12533
92 Ga0209974_10002070 3300027876 Bacteria 7335
93 Ga0207428_10000436 3300027907 Bacteria 51096
94 Ga0207428_10019906 3300027907 Bacteria 5715
95 Ga0265340_10000542 3300031247 Bacteria 20871
96 Ga0307513_10012406 3300031456 Bacteria 10522
97 Ga0307513_10130012 3300031456 Bacteria 2466
98 Ga0307408_100002127 3300031548 Bacteria 14211
99 Ga0307408_100020222 3300031548 Bacteria 4490
100 Ga0307408_100025369 3300031548 Bacteria 4060
101 Ga0307408_100041949 3300031548 Bacteria 3246
102 Ga0307408_100068848 3300031548 Bacteria 2607
103 Ga0307408_100070426 3300031548 Bacteria 2582
104 Ga0316575_10000074 3300031665 Bacteria 24489
105 Ga0316579_10000157 3300031691 Bacteria 19319
106 Ga0307405_10001854 3300031731 Bacteria 9073
107 Ga0307405_10003417 3300031731 Bacteria 7291
108 Ga0307405_10086076 3300031731 Bacteria 2068
109 Ga0307413_10038877 3300031824 Bacteria 2761
110 Ga0307410_10003319 3300031852 Bacteria 8043
111 Ga0307410_10007650 3300031852 Bacteria 5928
112 Ga0307410_10010796 3300031852 Bacteria 5196
113 Ga0307410_10017715 3300031852 Bacteria 4285
114 Ga0307406_10005627 3300031901 Bacteria 6850
115 Ga0307406_10036539 3300031901 Bacteria 3027
116 Ga0307406_10095923 3300031901 Bacteria 2008
117 Ga0307407_10000512 3300031903 Bacteria 12004
118 Ga0307407_10001816 3300031903 Bacteria 8004
119 Ga0307407_10030034 3300031903 Bacteria 2927
120 Ga0307412_10003954 3300031911 Bacteria 8259
121 Ga0307412_10039003 3300031911 Bacteria 3063
122 Ga0307409_100031615 3300031995 Bacteria 3823
123 Ga0307409_100032838 3300031995 Bacteria 3769
124 Ga0307409_100052023 3300031995 Bacteria 3138
125 Ga0307409_100084159 3300031995 Bacteria 2582
126 Ga0307409_100158538 3300031995 Bacteria 1976
127 Ga0307416_100004838 3300032002 Bacteria 8194
128 Ga0307416_100027580 3300032002 Bacteria 4208
129 Ga0307416_100027964 3300032002 Bacteria 4185
130 Ga0307416_100101461 3300032002 Bacteria 2506
131 Ga0307416_100114031 3300032002 Bacteria 2390
132 Ga0307416_100136897 3300032002 Bacteria 2217
133 Ga0307416_100161730 3300032002 Bacteria 2070
134 Ga0307414_10008481 3300032004 Bacteria 5830
135 Ga0307414_10038045 3300032004 Bacteria 3227
136 Ga0307411_10001377 3300032005 Bacteria 9848
137 Ga0307411_10021403 3300032005 Bacteria 3783
138 Ga0307411_10062362 3300032005 Bacteria 2486
139 Ga0307415_100013729 3300032126 Bacteria 4737
140 Ga0307415_100066389 3300032126 Bacteria 2517
141 Ga0316574_0009239 3300035398 Bacteria 5515
142 Ga0395899_0004372 3300037312 Bacteria 11021
143 Ga0395899_0007590 3300037312 Bacteria 8367
144 Ga0395900_0006044 3300037418 Bacteria 12629
145 Ga0395900_0011099 3300037418 Bacteria 9208
146 Ga0395900_0035666 3300037418 Bacteria 5124
147 Ga0395898_0012766 3300037466 Bacteria 8675
148 Ga0395898_0033379 3300037466 Bacteria 5137
149 Ga0395905_0043218 3300037471 Bacteria 4228
150 Ga0395901_0015850 3300038443 Bacteria 7681
151 Ga0395901_0081944 3300038443 Bacteria 3370
152 Ga0400488_39130 3300038741 Bacteria 5238
153 Ga0237816_00840 3300039145 Bacteria 2521
154 Ga0439436_0000859 3300041404 Bacteria 8300
155 Ga0439436_0002090 3300041404 Bacteria 5961
156 Ga0439439_0004440 3300041406 Bacteria 3163
157 Ga0451837_1680396 3300041494 Bacteria 3146
158 Ga0439442_000087 3300042002 Bacteria 21987
159 Ga0439432_008495 3300042006 Bacteria 3604
160 Ga0439449_0000105 3300042007 Bacteria 27271
161 Ga0439449_0003454 3300042007 Bacteria 6149
162 Ga0439457_003847 3300042014 Bacteria 4022
163 Ga0439463_002036 3300042016 Bacteria 5249
164 Ga0450919_001468 3300042121 Bacteria 3083
165 Ga0450920_000846 3300042122 Bacteria 4964
166 Ga0450920_001138 3300042122 Bacteria 4362
167 Ga0450908_001903 3300042184 Bacteria 4083
168 Ga0450909_001236 3300042185 Bacteria 3551
169 Ga0439434_0005926 3300042435 Bacteria 3569
170 Ga0439440_0000181 3300042993 Bacteria 9647
171 Ga0466965_0024679 3300044683 Bacteria 2909
172 Ga0466965_0059612 3300044683 Bacteria 1906
173 Ga0466961_0054602 3300044693 Bacteria 2548
174 Ga0466963_0054228 3300044694 Bacteria 2664
175 Ga0466963_0118070 3300044694 Bacteria 1824
176 Ga0466971_0017262 3300044719 Bacteria 3191
177 Ga0466970_0004783 3300044765 Bacteria 6688
178 Ga0466970_0017387 3300044765 Bacteria 3716
179 Ga0466957_0014720 3300044842 Bacteria 4558
180 Ga0466958_0033443 3300045836 Bacteria 3063
181 Ga0466967_0032821 3300045976 Bacteria 4389
182 Ga0466967_0057808 3300045976 Bacteria 3425
183 Ga0466967_0113530 3300045976 Bacteria 2492
184 Ga0495653_0016137 3300046463 Bacteria 6085
185 Ga0495580_0004554 3300046472 Bacteria 11639
186 Ga0495580_0050507 3300046472 Bacteria 2941
187 Ga0495582_0005447 3300046473 Bacteria 7097
188 Ga0495639_0038320 3300046475 Bacteria 2152
189 Ga0495664_0013841 3300046477 Bacteria 4574
190 Ga0495665_0001662 3300046531 Bacteria 11935
191 Ga0495587_0013737 3300046536 Bacteria 5088
192 Ga0495645_0016514 3300046543 Bacteria 5272
193 Ga0495667_0008270 3300046559 Bacteria 7054
194 Ga0495656_0038176 3300046615 Bacteria 1988
195 Ga0495635_0027570 3300046663 Bacteria 3951
196 Ga0495670_0002329 3300046691 Bacteria 9371
197 Ga0495600_0013903 3300046809 Bacteria 5070
198 Ga0495581_0001398 3300047315 Bacteria 13349
199 Ga0495581_0022952 3300047315 Bacteria 3614
200 Ga0496103_0014162 3300048906 Bacteria 4733
201 Ga0496103_0034878 3300048906 Bacteria 3078
202 Ga0496104_0076565 3300048907 Bacteria 3186
203 Ga0496110_0056305 3300048913 Bacteria 3460
204 Ga0496112_0068176 3300048915 Bacteria 3513
205 Ga0496114_0009866 3300048917 Bacteria 7589
206 Ga0496114_0016693 3300048917 Bacteria 5920
207 Ga0496114_0031197 3300048917 Bacteria 4385
208 Ga0496114_0161791 3300048917 Bacteria 1947
209 Ga0496115_0023925 3300048918 Bacteria 4743
210 Ga0496117_0062106 3300048920 Bacteria 2562
211 Ga0496118_0031606 3300048921 Bacteria 4383
212 Ga0496118_0076626 3300048921 Bacteria 2376
213 Ga0496122_0001777 3300048925 Bacteria 33035
214 Ga0496122_0004513 3300048925 Bacteria 17191
215 Ga0496123_0001305 3300048926 Bacteria 35428
216 Ga0496124_0005518 3300048927 Bacteria 14201
217 Ga0496125_0000079 3300048928 Bacteria 230066
218 Ga0496125_0011321 3300048928 Bacteria 8934
219 Ga0501310_000750 3300049130 Bacteria 2871
220 Ga0501031_0012819 3300049568 Bacteria 5476
221 Ga0501032_0073651 3300049569 Bacteria 2275
222 Ga0501033_0004219 3300049570 Bacteria 11565
223 Ga0501033_0112465 3300049570 Bacteria 1981
224 Ga0501034_0000015 3300049571 Bacteria 296163
225 Ga0501034_0006725 3300049571 Bacteria 12317
226 Ga0501034_0062383 3300049571 Bacteria 3743
227 Ga0501034_0119768 3300049571 Bacteria 2619
228 Ga0501036_0084784 3300049572 Bacteria 2678
229 Ga0501036_0119224 3300049572 Bacteria 2228
230 Ga0501037_0000241 3300049573 Bacteria 46956
231 Ga0501037_0007411 3300049573 Bacteria 8021
232 Ga0501037_0017693 3300049573 Bacteria 5245
233 Ga0501038_0006418 3300049574 Bacteria 10886
234 Ga0501038_0007528 3300049574 Bacteria 10038
235 Ga0501038_0028795 3300049574 Bacteria 4931
236 Ga0501039_0000153 3300049575 Bacteria 47341
237 Ga0501039_0055025 3300049575 Bacteria 3081
238 Ga0501039_0081047 3300049575 Bacteria 2526
239 Ga0501042_0051210 3300049578 Bacteria 2945
240 Ga0501043_0000079 3300049579 Bacteria 85383
241 Ga0501043_0004672 3300049579 Bacteria 11102
242 Ga0501046_0000170 3300049580 Bacteria 66046
243 Ga0501046_0017559 3300049580 Bacteria 5967
244 Ga0501047_0017686 3300049581 Bacteria 6830
245 Ga0501047_0133297 3300049581 Bacteria 2364
246 Ga0501048_0000365 3300049582 Bacteria 31328
247 Ga0501067_0044239 3300049583 Bacteria 2474
248 Ga0501070_0024672 3300049586 Bacteria 5042
249 Ga0501071_0000493 3300049587 Bacteria 19987
250 Ga0501071_0010616 3300049587 Bacteria 6177
251 Ga0501071_0013840 3300049587 Bacteria 5507
252 Ga0501074_0000304 3300049590 Bacteria 28369
253 Ga0501075_0014610 3300049591 Bacteria 5626
254 Ga0501077_0084553 3300049593 Bacteria 2011
255 Ga0501079_0047658 3300049741 Bacteria 3306
256 Ga0501083_0041065 3300049744 Bacteria 3138
257 Ga0501279_002150 3300049775 Bacteria 2609
258 Ga0501035_0001165 3300049822 Bacteria 27457
259 Ga0501035_0012495 3300049822 Bacteria 7845
260 Ga0501044_0020163 3300049823 Bacteria 7115
261 Ga0501044_0131821 3300049823 Bacteria 2493
262 Ga0501044_0183332 3300049823 Bacteria 2059
263 nmdc:mga03n38_2240_c1 3300050490 Bacteria 5909
264 nmdc:mga00v17_1237_c1 3300050491 Bacteria 13393
265 nmdc:mga00v17_22091_c1 3300050491 Bacteria 3667
266 nmdc:mga07m45_1332_c1 3300050496 Bacteria 11253
267 nmdc:mga05p37_60722_c1 3300050507 Bacteria 4654
268 nmdc:mga09592_14294_c1 3300050508 Bacteria 6480
269 nmdc:mga09592_154675_c1 3300050508 Bacteria 1979
270 nmdc:mga06r32_8226_c1 3300050510 Bacteria 9392
271 nmdc:mga08y16_31311_c1 3300050511 Bacteria 5596
272 nmdc:mga0n895_7598_c1 3300050512 Bacteria 9320
273 nmdc:mga08x19_2918_c1 3300050514 Bacteria 10282
274 nmdc:mga0a205_4578_c1 3300050515 Bacteria 12401
275 Ga0495655_0000808 3300053083 Bacteria 4914
276 Ga0500556_0000964 3300053104 Bacteria 15406
277 Ga0500593_000189 3300053117 Bacteria 25029
278 Ga0500616_0000740 3300053153 Bacteria 37626
279 Ga0500616_0003057 3300053153 Bacteria 13159
280 Ga0500634_0000151 3300053161 Bacteria 24470
281 Ga0501084_0073638 3300054114 Bacteria 2860
282 Ga0501082_0029395 3300060353 Bacteria 4734

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0062383 Ga0501034_0062383_1482_3056 508
2 3300046615 Ga0495656_0038176 Ga0495656_0038176_23_1585 520
3 3300049575 Ga0501039_0081047 Ga0501039_0081047_886_2514 536
4 3300009147 Ga0114129_10020083 Ga0114129_100200833 538
5 3300050507 nmdc:mga05p37_60722_c1 nmdc:mga05p37_60722_c1_1685_3403 538
6 3300046475 Ga0495639_0038320 Ga0495639_0038320_18_1643 541
7 3300039145 Ga0237816_00840 Ga0237816_00840_152_1846 542
8 3300050508 nmdc:mga09592_154675_c1 nmdc:mga09592_154675_c1_197_1966 542
9 3300013104 Ga0157370_10006020 Ga0157370_100060204 544
10 3300049581 Ga0501047_0133297 Ga0501047_0133297_36_1670 544
11 3300005937 Ga0081455_10001480 Ga0081455_1000148029 546
12 3300048913 Ga0496110_0056305 Ga0496110_0056305_1114_2919 546
13 iso_pu_bacteria 2765235840 2765577567 553
14 3300005937 Ga0081455_10029521 Ga0081455_100295214 554
15 3300006844 Ga0075428_100161432 Ga0075428_1001614322 554
16 3300044719 Ga0466971_0017262 Ga0466971_0017262_301_2067 556
17 3300005337 Ga0070682_100038933 Ga0070682_1000389332 557
18 3300005366 Ga0070659_100022978 Ga0070659_1000229784 557
19 3300005457 Ga0070662_100004191 Ga0070662_1000041918 557
20 3300005718 Ga0068866_10003850 Ga0068866_100038503 557
21 3300009098 Ga0105245_10015536 Ga0105245_100155362 557
22 3300009176 Ga0105242_10007768 Ga0105242_100077682 557
23 3300009553 Ga0105249_10063568 Ga0105249_100635682 557
24 3300009993 Ga0105028_101619 Ga0105028_1016192 557
25 3300013307 Ga0157372_10008730 Ga0157372_100087306 557
26 3300025901 Ga0207688_10033996 Ga0207688_100339962 557
27 3300025938 Ga0207704_10014703 Ga0207704_100147034 557
28 3300005843 Ga0068860_100030710 Ga0068860_1000307101 558
29 3300031548 Ga0307408_100020222 Ga0307408_1000202223 558
30 3300031901 Ga0307406_10036539 Ga0307406_100365391 558
31 3300032005 Ga0307411_10062362 Ga0307411_100623622 558
32 3300032126 Ga0307415_100066389 Ga0307415_1000663891 558
33 3300053161 Ga0500634_0000151 Ga0500634_0000151_18936_20630 558
34 3300005985 Ga0081539_10000314 Ga0081539_1000031485 559
35 3300006048 Ga0075363_100000512 Ga0075363_1000005127 559
36 3300006051 Ga0075364_10003897 Ga0075364_100038972 559
37 3300009147 Ga0114129_10018301 Ga0114129_100183014 559
38 3300050490 nmdc:mga03n38_2240_c1 nmdc:mga03n38_2240_c1_2217_4001 559
39 3300050491 nmdc:mga00v17_22091_c1 nmdc:mga00v17_22091_c1_1180_2964 559
40 3300050496 nmdc:mga07m45_1332_c1 nmdc:mga07m45_1332_c1_5204_6988 559
41 3300050508 nmdc:mga09592_14294_c1 nmdc:mga09592_14294_c1_3283_5034 559
42 3300005614 Ga0068856_100003051 Ga0068856_1000030516 560
43 3300009551 Ga0105238_10008019 Ga0105238_100080197 560
44 3300014497 Ga0182008_10018406 Ga0182008_100184063 560
45 3300048918 Ga0496115_0023925 Ga0496115_0023925_1821_3545 560
46 3300025933 Ga0207706_10003981 Ga0207706_1000398112 561
47 3300031456 Ga0307513_10130012 Ga0307513_101300122 561
48 3300006846 Ga0075430_100015537 Ga0075430_1000155376 563
49 3300006880 Ga0075429_100007255 Ga0075429_1000072554 563
50 3300009098 Ga0105245_10002018 Ga0105245_100020183 563
51 3300009148 Ga0105243_10048016 Ga0105243_100480163 563
52 3300005937 Ga0081455_10068936 Ga0081455_100689362 564
53 3300006852 Ga0075433_10000261 Ga0075433_1000026130 566
54 3300048917 Ga0496114_0161791 Ga0496114_0161791_144_1889 566
55 3300005441 Ga0070700_100002130 Ga0070700_1000021309 567
56 3300005459 Ga0068867_100011833 Ga0068867_1000118335 567
57 3300005535 Ga0070684_100003936 Ga0070684_1000039363 567
58 3300009553 Ga0105249_10075573 Ga0105249_100755731 567
59 3300025935 Ga0207709_10021914 Ga0207709_100219143 567
60 3300025937 Ga0207669_10093946 Ga0207669_100939462 567
61 3300025940 Ga0207691_10004639 Ga0207691_1000463912 567
62 3300026075 Ga0207708_10000867 Ga0207708_1000086719 567
63 3300026089 Ga0207648_10008372 Ga0207648_100083728 567
64 3300005719 Ga0068861_100012297 Ga0068861_1000122976 568
65 3300005840 Ga0068870_10024203 Ga0068870_100242033 568
66 3300014325 Ga0163163_10097345 Ga0163163_100973451 568
67 3300025901 Ga0207688_10045358 Ga0207688_100453583 568
68 3300025908 Ga0207643_10004812 Ga0207643_100048123 568
69 3300026041 Ga0207639_10127694 Ga0207639_101276941 568
70 3300026118 Ga0207675_100005412 Ga0207675_10000541211 568
71 3300038443 Ga0395901_0081944 Ga0395901_0081944_837_2603 569
72 3300049130 Ga0501310_000750 Ga0501310_000750_731_2476 570
73 3300038741 Ga0400488_39130 Ga0400488_39130_857_2626 571
74 3300005366 Ga0070659_100030347 Ga0070659_1000303473 572
75 3300006058 Ga0075432_10001167 Ga0075432_100011677 572
76 3300031731 Ga0307405_10001854 Ga0307405_100018545 572
77 3300031901 Ga0307406_10005627 Ga0307406_100056275 572
78 3300031903 Ga0307407_10000512 Ga0307407_100005128 572
79 3300032004 Ga0307414_10008481 Ga0307414_100084815 572
80 3300032005 Ga0307411_10001377 Ga0307411_100013775 572
81 3300032126 Ga0307415_100013729 Ga0307415_1000137293 572
82 3300048917 Ga0496114_0009866 Ga0496114_0009866_2254_4041 572
83 3300050510 nmdc:mga06r32_8226_c1 nmdc:mga06r32_8226_c1_2994_4772 572
84 3300005981 Ga0081538_10000448 Ga0081538_1000044826 574
85 3300027876 Ga0209974_10002070 Ga0209974_100020704 574
86 3300044694 Ga0466963_0054228 Ga0466963_0054228_466_2220 574
87 3300044842 Ga0466957_0014720 Ga0466957_0014720_2419_4173 574
88 iso_pu_bacteria 2643221681 2644456671 576
89 iso_pu_bacteria 2643221961 2645720110 576
90 iso_pu_bacteria 2643221962 2645726968 576
91 3300005347 Ga0070668_100079962 Ga0070668_1000799622 578
92 3300025972 Ga0207668_10065012 Ga0207668_100650122 578
93 3300050491 nmdc:mga00v17_1237_c1 nmdc:mga00v17_1237_c1_3426_5165 578
94 iso_pu_bacteria 2939657138 2939657492 579
95 3300013105 Ga0157369_10034905 Ga0157369_100349054 580
96 3300013306 Ga0163162_10089603 Ga0163162_100896033 580
97 3300044694 Ga0466963_0118070 Ga0466963_0118070_48_1796 580
98 3300049570 Ga0501033_0112465 Ga0501033_0112465_92_1837 580
99 3300049572 Ga0501036_0119224 Ga0501036_0119224_215_1960 580
100 3300049587 Ga0501071_0013840 Ga0501071_0013840_3400_5145 580
101 iso_pu_bacteria 2643221604 2644034645 580
102 iso_pu_bacteria 2643221617 2644099018 580
103 iso_pu_bacteria 2643221620 2644114899 580
104 iso_pu_bacteria 2728369276 2729905558 580
105 iso_pu_bacteria 2883821847 2883824025 580
106 3300005356 Ga0070674_100056372 Ga0070674_1000563722 581
107 3300031665 Ga0316575_10000074 Ga0316575_1000007414 581
108 iso_pu_bacteria 2622736605 2623502020 581
109 iso_pu_bacteria 2643221679 2644446514 581
110 iso_pu_bacteria 2868088558 2868091164 581
111 3300031995 Ga0307409_100031615 Ga0307409_1000316151 582
112 3300031995 Ga0307409_100084159 Ga0307409_1000841592 582
113 3300032002 Ga0307416_100101461 Ga0307416_1001014612 582
114 3300032002 Ga0307416_100114031 Ga0307416_1001140311 582
115 3300032004 Ga0307414_10038045 Ga0307414_100380454 582
116 3300035398 Ga0316574_0009239 Ga0316574_0009239_3012_4769 582
117 3300044683 Ga0466965_0059612 Ga0466965_0059612_56_1819 582
118 3300044765 Ga0466970_0017387 Ga0466970_0017387_1939_3702 582
119 3300049569 Ga0501032_0073651 Ga0501032_0073651_200_1966 582
120 3300049571 Ga0501034_0006725 Ga0501034_0006725_8557_10317 582
121 3300049572 Ga0501036_0084784 Ga0501036_0084784_372_2138 582
122 3300049578 Ga0501042_0051210 Ga0501042_0051210_739_2505 582
123 3300049591 Ga0501075_0014610 Ga0501075_0014610_3767_5533 582
124 3300049593 Ga0501077_0084553 Ga0501077_0084553_149_1915 582
125 3300049741 Ga0501079_0047658 Ga0501079_0047658_103_1869 582
126 3300053153 Ga0500616_0000740 Ga0500616_0000740_5386_7158 582
127 3300053153 Ga0500616_0003057 Ga0500616_0003057_5302_7071 582
128 iso_pu_bacteria 2515154155 2515854185 582
129 iso_pu_bacteria 2643221690 2644506577 582
130 iso_pu_bacteria 2643221694 2644526509 582
131 iso_pu_bacteria 2643221722 2644671175 582
132 iso_pu_bacteria 2675903058 2676475369 582
133 iso_pu_bacteria 2773857762 2774393520 582
134 iso_pu_bacteria 2784132109 2784472592 582
135 iso_pu_bacteria 2808606439 2809195588 582
136 iso_pu_bacteria 2827628540 2827629700 582
137 iso_pu_bacteria 2884994152 2884995040 582
138 iso_pu_bacteria 2891968417 2891971912 582
139 3300045836 Ga0466958_0033443 Ga0466958_0033443_607_2427 583
140 3300049574 Ga0501038_0028795 Ga0501038_0028795_2912_4711 583
141 3300049583 Ga0501067_0044239 Ga0501067_0044239_120_1874 583
142 iso_pu_bacteria 2887443736 2887447481 583
143 3300049568 Ga0501031_0012819 Ga0501031_0012819_441_2195 584
144 3300049570 Ga0501033_0004219 Ga0501033_0004219_9671_11425 584
145 3300049573 Ga0501037_0000241 Ga0501037_0000241_160_1914 584
146 3300049574 Ga0501038_0006418 Ga0501038_0006418_433_2187 584
147 3300049575 Ga0501039_0000153 Ga0501039_0000153_159_1913 584
148 3300049579 Ga0501043_0000079 Ga0501043_0000079_705_2459 584
149 3300049580 Ga0501046_0000170 Ga0501046_0000170_35196_36950 584
150 3300049582 Ga0501048_0000365 Ga0501048_0000365_7205_8959 584
151 3300049586 Ga0501070_0024672 Ga0501070_0024672_393_2147 584
152 3300049590 Ga0501074_0000304 Ga0501074_0000304_163_1917 584
153 3300049822 Ga0501035_0001165 Ga0501035_0001165_20971_22725 584
154 3300054114 Ga0501084_0073638 Ga0501084_0073638_991_2745 584
155 3300031548 Ga0307408_100070426 Ga0307408_1000704262 585
156 3300031731 Ga0307405_10086076 Ga0307405_100860762 585
157 3300031901 Ga0307406_10095923 Ga0307406_100959232 585
158 3300044683 Ga0466965_0024679 Ga0466965_0024679_633_2390 585
159 3300045976 Ga0466967_0032821 Ga0466967_0032821_50_1828 585
160 3300046463 Ga0495653_0016137 Ga0495653_0016137_3108_4871 585
161 3300048917 Ga0496114_0031197 Ga0496114_0031197_805_2562 585
162 3300049571 Ga0501034_0119768 Ga0501034_0119768_363_2162 585
163 iso_pu_bacteria 2738541272 2738692449 585
164 iso_pu_bacteria 2738543027 2739323534 585
165 iso_pu_bacteria 2739367654 2739608980 585
166 iso_pu_bacteria 2758568522 2760303577 585
167 iso_pu_bacteria 2758568621 2760622568 585
168 iso_pu_bacteria 2808606394 2809027317 585
169 iso_pu_bacteria 2835188231 2835189218 585
170 iso_pu_bacteria 2839986021 2839989408 585
171 iso_pu_bacteria 2932431166 2932433509 585
172 iso_pu_bacteria 8056579771 8056584055 585
173 3300003203 JGI25406J46586_10017920 JGI25406J46586_100179203 586
174 3300005329 Ga0070683_100047244 Ga0070683_1000472443 586
175 3300005367 Ga0070667_100120992 Ga0070667_1001209921 586
176 3300005985 Ga0081539_10000846 Ga0081539_1000084626 586
177 3300005985 Ga0081539_10023287 Ga0081539_100232873 586
178 3300006038 Ga0075365_10016834 Ga0075365_100168343 586
179 3300013105 Ga0157369_10063689 Ga0157369_100636892 586
180 3300013307 Ga0157372_10097615 Ga0157372_100976152 586
181 3300031247 Ga0265340_10000542 Ga0265340_1000054215 586
182 3300031456 Ga0307513_10012406 Ga0307513_100124064 586
183 3300031691 Ga0316579_10000157 Ga0316579_100001577 586
184 3300031995 Ga0307409_100052023 Ga0307409_1000520232 586
185 3300044693 Ga0466961_0054602 Ga0466961_0054602_482_2248 586
186 3300044765 Ga0466970_0004783 Ga0466970_0004783_4268_6034 586
187 3300045976 Ga0466967_0057808 Ga0466967_0057808_131_1915 586
188 3300045976 Ga0466967_0113530 Ga0466967_0113530_287_2053 586
189 3300048917 Ga0496114_0016693 Ga0496114_0016693_1996_3795 586
190 3300048920 Ga0496117_0062106 Ga0496117_0062106_221_2014 586
191 3300048921 Ga0496118_0031606 Ga0496118_0031606_2355_4130 586
192 3300048921 Ga0496118_0076626 Ga0496118_0076626_363_2156 586
193 3300048925 Ga0496122_0001777 Ga0496122_0001777_24762_26555 586
194 3300048925 Ga0496122_0004513 Ga0496122_0004513_15320_17131 586
195 3300048926 Ga0496123_0001305 Ga0496123_0001305_8263_10074 586
196 3300048927 Ga0496124_0005518 Ga0496124_0005518_38_1849 586
197 3300048928 Ga0496125_0000079 Ga0496125_0000079_212782_214575 586
198 3300048928 Ga0496125_0011321 Ga0496125_0011321_45_1856 586
199 3300049574 Ga0501038_0007528 Ga0501038_0007528_1872_3665 586
200 3300049575 Ga0501039_0055025 Ga0501039_0055025_786_2555 586
201 3300049580 Ga0501046_0017559 Ga0501046_0017559_81_1874 586
202 3300049581 Ga0501047_0017686 Ga0501047_0017686_4717_6510 586
203 3300049587 Ga0501071_0010616 Ga0501071_0010616_3639_5417 586
204 3300049744 Ga0501083_0041065 Ga0501083_0041065_1285_3078 586
205 3300049822 Ga0501035_0012495 Ga0501035_0012495_2216_4009 586
206 3300049823 Ga0501044_0020163 Ga0501044_0020163_4045_5838 586
207 3300049823 Ga0501044_0183332 Ga0501044_0183332_92_1918 586
208 3300053104 Ga0500556_0000964 Ga0500556_0000964_13477_15249 586
209 3300053117 Ga0500593_000189 Ga0500593_000189_4955_6727 586
210 3300060353 Ga0501082_0029395 Ga0501082_0029395_1054_2847 586
211 iso_pu_bacteria 2643221613 2644081811 586
212 iso_pu_bacteria 2643221721 2644665146 586
213 iso_pu_bacteria 2811994878 2812350487 586
214 iso_pu_bacteria 2811994880 2812365543 586
215 iso_pu_bacteria 2837268691 2837273012 586
216 iso_pu_bacteria 2935890801 2935891313 586
217 3300005535 Ga0070684_100186063 Ga0070684_1001860631 587
218 3300006058 Ga0075432_10000034 Ga0075432_100000348 587
219 3300006852 Ga0075433_10003937 Ga0075433_100039376 587
220 3300006871 Ga0075434_100006891 Ga0075434_1000068916 587
221 3300006914 Ga0075436_100003930 Ga0075436_1000039306 587
222 3300009094 Ga0111539_10000342 Ga0111539_100003423 587
223 3300027907 Ga0207428_10000436 Ga0207428_1000043638 587
224 3300042016 Ga0439463_002036 Ga0439463_002036_1492_3264 587
225 3300042993 Ga0439440_0000181 Ga0439440_0000181_7338_9110 587
226 3300050511 nmdc:mga08y16_31311_c1 nmdc:mga08y16_31311_c1_1670_3442 587
227 3300050512 nmdc:mga0n895_7598_c1 nmdc:mga0n895_7598_c1_4472_6244 587
228 3300050514 nmdc:mga08x19_2918_c1 nmdc:mga08x19_2918_c1_4454_6226 587
229 3300050515 nmdc:mga0a205_4578_c1 nmdc:mga0a205_4578_c1_5169_6941 587
230 3300049587 Ga0501071_0000493 Ga0501071_0000493_13740_15530 588
231 iso_pu_bacteria 2857710386 2857712820 589
232 3300053083 Ga0495655_0000808 Ga0495655_0000808_1409_3259 590
233 iso_pu_bacteria 2554235227 2555230712 591
234 iso_pu_bacteria 2654587600 2655031910 591
235 iso_pu_bacteria 2905926851 2905927610 593
236 iso_pu_bacteria 2905926851 2905929069 593
237 iso_pu_bacteria 8004025490 8004026081 593
238 iso_pu_bacteria 2857479173 2857481248 595
239 iso_pu_bacteria 2857632687 2857634691 595
240 iso_pu_bacteria 2870804320 2870805031 595
241 iso_pu_bacteria 2893684298 2893684911 595
242 iso_pu_bacteria 2920879853 2920883673 595
243 iso_pu_bacteria 2946024296 2946025218 595
244 iso_pu_bacteria 2974302888 2974303295 595
245 3300011119 Ga0105246_10010509 Ga0105246_100105095 596
246 3300037418 Ga0395900_0035666 Ga0395900_0035666_1976_3766 596
247 3300037466 Ga0395898_0012766 Ga0395898_0012766_6017_7807 596
248 3300049571 Ga0501034_0000015 Ga0501034_0000015_85663_87453 596
249 3300049573 Ga0501037_0007411 Ga0501037_0007411_1669_3459 596
250 iso_pu_bacteria 2739367653 2739604219 596
251 iso_pu_bacteria 2816332305 2817509525 596
252 iso_pu_bacteria 2857727296 2857729326 596
253 iso_pu_bacteria 2870801768 2870802966 596
254 iso_pu_bacteria 2919051321 2919053257 596
255 iso_pu_bacteria 2939598168 2939599977 598
256 iso_pu_bacteria 8004021418 8004024892 598
257 3300031995 Ga0307409_100158538 Ga0307409_1001585381 599
258 iso_pu_bacteria 2690315906 2691513412 599
259 iso_pu_bacteria 2775506735 2775656219 599
260 iso_pu_bacteria 2808606357 2808830664 599
261 iso_pu_bacteria 2808606360 2808851851 599
262 iso_pu_bacteria 2808606366 2808879833 599
263 iso_pu_bacteria 2808606370 2808894916 599
264 iso_pu_bacteria 2808606371 2808895872 599
265 iso_pu_bacteria 2811994871 2812321780 599
266 iso_pu_bacteria 2844849076 2844852219 599
267 iso_pu_bacteria 2857740372 2857743715 599
268 iso_pu_bacteria 2904497146 2904499617 599
269 iso_pu_bacteria 2904776348 2904780274 599
270 iso_pu_bacteria 2910809715 2910812784 599
271 iso_pu_bacteria 2919034639 2919036068 599
272 iso_pu_bacteria 2919059106 2919060783 599
273 iso_pu_bacteria 2919391150 2919392344 599
274 iso_pu_bacteria 2919538618 2919538719 599
275 iso_pu_bacteria 2932426870 2932431015 599
276 iso_pu_bacteria 2933418574 2933419098 599
277 iso_pu_bacteria 2939647034 2939647957 599
278 iso_pu_bacteria 2939674588 2939678461 599
279 iso_pu_bacteria 2945916053 2945919654 599
280 iso_pu_bacteria 2945920336 2945924438 599
281 iso_pu_bacteria 2945941187 2945943835 599
282 iso_pu_bacteria 2945956166 2945957982 599
283 iso_pu_bacteria 2946059875 2946063376 599
284 iso_pu_bacteria 2953998280 2954001018 599
285 iso_pu_bacteria 8054107350 8054111540 599
286 3300037312 Ga0395899_0007590 Ga0395899_0007590_3339_5141 600
287 3300037418 Ga0395900_0011099 Ga0395900_0011099_5281_7095 600
288 3300041494 Ga0451837_1680396 Ga0451837_1680396_875_2683 600
289 3300000549 LJQas_1001113 LJQas_10011131 603
290 3300002773 JGI25152J39213_1000627 JGI25152J39213_10006279 603
291 3300005328 Ga0070676_10007842 Ga0070676_100078422 603
292 3300005353 Ga0070669_100044877 Ga0070669_1000448773 603
293 3300005367 Ga0070667_100022116 Ga0070667_1000221164 603
294 3300009011 Ga0105251_10010698 Ga0105251_100106986 603
295 3300009036 Ga0105244_10006960 Ga0105244_100069604 603
296 3300009036 Ga0105244_10020819 Ga0105244_100208192 603
297 3300009177 Ga0105248_10084375 Ga0105248_100843752 603
298 3300011119 Ga0105246_10006712 Ga0105246_100067127 603
299 3300011119 Ga0105246_10050232 Ga0105246_100502322 603
300 3300013100 Ga0157373_10070146 Ga0157373_100701461 603
301 3300013102 Ga0157371_10043031 Ga0157371_100430311 603
302 3300025258 Ga0209129_1000079 Ga0209129_100007996 603
303 3300025294 Ga0209025_1000458 Ga0209025_100045865 603
304 3300025315 Ga0207697_10009750 Ga0207697_100097503 603
305 3300025728 Ga0207655_1011861 Ga0207655_10118612 603
306 3300025728 Ga0207655_1016010 Ga0207655_10160103 603
307 3300025926 Ga0207659_10060220 Ga0207659_100602201 603
308 3300025940 Ga0207691_10000777 Ga0207691_1000077720 603
309 3300026121 Ga0207683_10004157 Ga0207683_100041578 603
310 3300027907 Ga0207428_10019906 Ga0207428_100199063 603
311 3300031548 Ga0307408_100002127 Ga0307408_1000021274 603
312 3300031548 Ga0307408_100025369 Ga0307408_1000253693 603
313 3300031548 Ga0307408_100041949 Ga0307408_1000419492 603
314 3300031548 Ga0307408_100068848 Ga0307408_1000688481 603
315 3300031731 Ga0307405_10003417 Ga0307405_100034176 603
316 3300031824 Ga0307413_10038877 Ga0307413_100388772 603
317 3300031852 Ga0307410_10003319 Ga0307410_100033196 603
318 3300031852 Ga0307410_10007650 Ga0307410_100076503 603
319 3300031852 Ga0307410_10010796 Ga0307410_100107965 603
320 3300031852 Ga0307410_10017715 Ga0307410_100177153 603
321 3300031903 Ga0307407_10001816 Ga0307407_100018164 603
322 3300031903 Ga0307407_10030034 Ga0307407_100300342 603
323 3300031911 Ga0307412_10003954 Ga0307412_100039544 603
324 3300031911 Ga0307412_10039003 Ga0307412_100390032 603
325 3300031995 Ga0307409_100032838 Ga0307409_1000328383 603
326 3300032002 Ga0307416_100004838 Ga0307416_1000048387 603
327 3300032002 Ga0307416_100027580 Ga0307416_1000275803 603
328 3300032002 Ga0307416_100027964 Ga0307416_1000279643 603
329 3300032002 Ga0307416_100136897 Ga0307416_1001368971 603
330 3300032002 Ga0307416_100161730 Ga0307416_1001617301 603
331 3300032005 Ga0307411_10021403 Ga0307411_100214032 603
332 3300037312 Ga0395899_0004372 Ga0395899_0004372_4044_5855 603
333 3300037418 Ga0395900_0006044 Ga0395900_0006044_8787_10598 603
334 3300037466 Ga0395898_0033379 Ga0395898_0033379_1002_2813 603
335 3300037471 Ga0395905_0043218 Ga0395905_0043218_618_2429 603
336 3300038443 Ga0395901_0015850 Ga0395901_0015850_4310_6121 603
337 3300041404 Ga0439436_0000859 Ga0439436_0000859_1960_3771 603
338 3300041404 Ga0439436_0002090 Ga0439436_0002090_389_2200 603
339 3300041406 Ga0439439_0004440 Ga0439439_0004440_123_1934 603
340 3300042002 Ga0439442_000087 Ga0439442_000087_18867_20678 603
341 3300042006 Ga0439432_008495 Ga0439432_008495_708_2519 603
342 3300042007 Ga0439449_0000105 Ga0439449_0000105_8282_10093 603
343 3300042007 Ga0439449_0003454 Ga0439449_0003454_2546_4357 603
344 3300042014 Ga0439457_003847 Ga0439457_003847_2193_4004 603
345 3300042121 Ga0450919_001468 Ga0450919_001468_212_2023 603
346 3300042122 Ga0450920_000846 Ga0450920_000846_2321_4132 603
347 3300042122 Ga0450920_001138 Ga0450920_001138_178_1989 603
348 3300042184 Ga0450908_001903 Ga0450908_001903_465_2276 603
349 3300042185 Ga0450909_001236 Ga0450909_001236_32_1843 603
350 3300042435 Ga0439434_0005926 Ga0439434_0005926_1211_3022 603
351 3300046472 Ga0495580_0004554 Ga0495580_0004554_3462_5273 603
352 3300046472 Ga0495580_0050507 Ga0495580_0050507_19_1830 603
353 3300046473 Ga0495582_0005447 Ga0495582_0005447_19_1830 603
354 3300046477 Ga0495664_0013841 Ga0495664_0013841_2681_4492 603
355 3300046531 Ga0495665_0001662 Ga0495665_0001662_5256_7067 603
356 3300046536 Ga0495587_0013737 Ga0495587_0013737_724_2586 603
357 3300046543 Ga0495645_0016514 Ga0495645_0016514_134_1945 603
358 3300046559 Ga0495667_0008270 Ga0495667_0008270_4872_6683 603
359 3300046663 Ga0495635_0027570 Ga0495635_0027570_1629_3440 603
360 3300046691 Ga0495670_0002329 Ga0495670_0002329_6608_8419 603
361 3300046809 Ga0495600_0013903 Ga0495600_0013903_2718_4529 603
362 3300047315 Ga0495581_0001398 Ga0495581_0001398_3572_5383 603
363 3300047315 Ga0495581_0022952 Ga0495581_0022952_226_2037 603
364 3300048906 Ga0496103_0014162 Ga0496103_0014162_407_2218 603
365 3300048906 Ga0496103_0034878 Ga0496103_0034878_1178_2989 603
366 3300048907 Ga0496104_0076565 Ga0496104_0076565_29_1891 603
367 3300048915 Ga0496112_0068176 Ga0496112_0068176_34_1845 603
368 3300049573 Ga0501037_0017693 Ga0501037_0017693_2943_4754 603
369 3300049579 Ga0501043_0004672 Ga0501043_0004672_7560_9371 603
370 3300049775 Ga0501279_002150 Ga0501279_002150_588_2399 603
371 3300049823 Ga0501044_0131821 Ga0501044_0131821_90_1901 603

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04073

tRNA_edit

Aminoacyl-tRNA editing domain

273

430

0.88

PF03129

HGTP_anticodon

Anticodon binding domain

526

617

0.87

PF00587

tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

111

510

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2j3m-assembly1.cif.gz_A prolyl-trna synthetase from enterococcus faecalis complexed with atp, manganese and prolinol 0.9255 3 597
2j3m-assembly1.cif.gz_A prolyl-trna synthetase from enterococcus faecalis complexed with atp, manganese and prolinol 0.9223 3 597
2j3l-assembly1.cif.gz_A prolyl-trna synthetase from enterococcus faecalis complexed with a prolyl-adenylate analogue ('5'-o-(n-(l-prolyl)-sulfamoyl)adenosine) 0.9188 3 597
2j3l-assembly1.cif.gz_A prolyl-trna synthetase from enterococcus faecalis complexed with a prolyl-adenylate analogue ('5'-o-(n-(l-prolyl)-sulfamoyl)adenosine) 0.9157 3 597
5xii-assembly2.cif.gz_B crystal structure of toxoplasma gondii prolyl-trna synthetase (tgprs) in complex with inhibitor 6 0.8861 24 600
ID Description Score Start End Superfamily
af_P9WFT9_1_251_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9718 1 249 3.30.930.10
af_P9WFT9_473_580_3.40.50.800 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9704 491 597 3.40.50.800
af_Q2G1Z4_2_243_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9639 6 244 3.30.930.10
af_P9WFT9_1_251_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9604 1 249 3.30.930.10
af_P16659_468_566_3.40.50.800 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9571 498 593 3.40.50.800
ID Description Score Start End GO Terms
AF-A0A7K1EFE3-F1-model_v4 deleted 0.9865 2 134
AF-A0A7Y1T868-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) 0.9863 3 136 GO:0004827
GO:0005524
GO:0005829
GO:0006433
AF-A0A380EH05-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) 0.9819 6 145 GO:0004827
GO:0005524
GO:0005829
GO:0006433
GO:0016740
AF-A0A3D1ZCY6-F1-model_v4 Proline--tRNA ligase 0.9818 3 126 GO:0004827
GO:0005524
GO:0005829
GO:0006433
AF-A0A7V2S6S9-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) 0.9817 3 115 GO:0004827
GO:0005524
GO:0005829
GO:0006433

Feature Viewer

pLDDT pTM Quality
93.23 0.89 High
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Predicted Structure (AlphaFold2)

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