F424140

General Info

Members Datasets Scaffolds Average Seq Length
366 236 732 154

Family's Representative Sequence

Representative Sequence 3300048919|Ga0496116_0052860|Ga0496116_0052860_1632_2168
Length 178
Sequence LRNEFDFGEMRKLLGRKERRGGMEMSYLVDFKDVSTVGLESSPVAEALAGLRANEARYFMNKYKYEFTVVPASESQESLDYVNRILREERDIAFAAKPLETSRFQVENIRFTYVFYEDGLAINVMYTVDDPKKRAVGFKLSEGMEVPKELEGKFKFARQKSKLAGTIRGSFFVIKGQY

Samples

Sample ID Description Type Environment
1 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
7 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
8 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
46 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
79 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
80 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
87 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
88 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
89 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
90 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
93 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
94 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
95 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
96 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
97 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
100 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
103 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
115 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
116 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
120 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
136 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
137 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
138 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
139 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
140 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
149 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
153 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
154 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
158 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
159 2554235283 Bacillus safensis VK Isolate Rhizosphere
160 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
161 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
162 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
163 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
164 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
165 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
166 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
167 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
168 2643221735 Bacillus sp. Root920 Isolate Unclassified
169 2671180694 Paenibacillus sp. A3 Isolate Unclassified
170 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
171 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
172 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
173 2738541295 Bacillus sp. OK085 Isolate Unclassified
174 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
175 2738543017 Bacillus sp. OV186 Isolate Unclassified
176 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
177 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
178 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
179 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
180 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
181 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
182 2818991441 Niallia circulans 3243 Isolate Rhizosphere
183 2818991459 Paenibacillus sp. 597 Isolate Unclassified
184 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
185 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
186 2857472729 Cohnella sp. R-74144 Isolate Unclassified
187 2857586860 Bacillus sp. R-71935 Isolate Unclassified
188 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
189 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
190 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
191 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
192 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
193 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
194 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
195 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
196 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
197 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
198 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
199 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
200 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
201 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
202 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
203 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
204 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
205 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
206 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
207 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
208 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
209 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
210 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
211 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
212 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
213 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
214 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
215 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
216 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
217 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
218 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
219 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
220 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
221 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
222 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
223 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
224 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
225 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
226 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
227 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
228 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified
229 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified
230 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
231 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
232 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
233 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
234 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
235 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
236 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 75.14
Metatranscriptomes 0.55
Isolates 24.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.93
Nodule 0.55
Rhizoplane 7.65
Rhizosphere 62.02
Stem 0
Stem Tuber 0
Unclassified 0.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496116_0052860 3300048919 Bacteria 2687
2 SwRhRL2b_contig_1658188 2162886007 Bacteria 2034
3 JGI25159J45721_1057015 3300002987 Bacteria 520
4 JGI25151J46595_10000012 3300003187 Bacteria 254028
5 JGI25151J46595_10005006 3300003187 Bacteria 6901
6 JGI25151J46595_10007572 3300003187 Bacteria 5305
7 JGI25151J46595_10024474 3300003187 Bacteria 2470
8 JGI25151J46595_10031083 3300003187 Bacteria 2089
9 JGI25151J46595_10078938 3300003187 Bacteria 961
10 JGI25151J46595_10136767 3300003187 Bacteria 602
11 Ga0006562J51391_1009104 3300003578 Bacteria 701
12 Ga0055538_1000708 3300003751 Bacteria 10129
13 Ga0055532_1000187 3300003758 Bacteria 51861
14 Ga0055532_1002054 3300003758 Bacteria 4611
15 Ga0055535_1008984 3300003761 Bacteria 1755
16 Ga0055536_1006956 3300003781 Bacteria 5151
17 Ga0055541_1003042 3300003841 Bacteria 3222
18 Ga0055541_1006145 3300003841 Bacteria 2057
19 Ga0065704_10077572 3300005289 Bacteria 4691
20 Ga0070683_100813177 3300005329 Bacteria 896
21 Ga0070670_100490872 3300005331 Bacteria 1091
22 Ga0070677_10013856 3300005333 Bacteria 2830
23 Ga0070674_100787225 3300005356 Bacteria 820
24 Ga0070685_10016005 3300005466 Bacteria 3989
25 Ga0068853_100154771 3300005539 Bacteria 2065
26 Ga0068855_100000012 3300005563 Bacteria 237166
27 Ga0068855_100111954 3300005563 Bacteria 3133
28 Ga0068855_100309422 3300005563 Bacteria 1748
29 Ga0068857_100027809 3300005577 Bacteria 4987
30 Ga0068854_100052633 3300005578 Bacteria 2920
31 Ga0068854_100130435 3300005578 Bacteria 1919
32 Ga0068856_100312238 3300005614 Bacteria 1590
33 Ga0068856_100370326 3300005614 Bacteria 1451
34 Ga0068852_100069919 3300005616 Bacteria 3078
35 Ga0068852_100275136 3300005616 Bacteria 1621
36 Ga0068859_100033354 3300005617 Bacteria 5170
37 Ga0068863_100329654 3300005841 Bacteria 1484
38 Ga0068860_100003490 3300005843 Bacteria 16183
39 Ga0070717_10711646 3300006028 Bacteria 912
40 Ga0075364_10732097 3300006051 Bacteria 675
41 Ga0070712_101661872 3300006175 Bacteria 559
42 Ga0097621_101466272 3300006237 Bacteria 647
43 Ga0075430_100184058 3300006846 Bacteria 1737
44 Ga0075431_100522868 3300006847 Bacteria 1176
45 Ga0097620_100033352 3300006931 Bacteria 5170
46 Ga0105244_10002620 3300009036 Bacteria 13485
47 Ga0105244_10053121 3300009036 Bacteria 2060
48 Ga0105244_10070733 3300009036 Bacteria 1740
49 Ga0105240_10007334 3300009093 Bacteria 16044
50 Ga0114129_11519495 3300009147 Bacteria 822
51 Ga0105241_10003633 3300009174 Bacteria 11461
52 Ga0105237_10000050 3300009545 Bacteria 160580
53 Ga0105237_10000631 3300009545 Bacteria 49186
54 Ga0105238_10005053 3300009551 Bacteria 13040
55 Ga0105238_10212454 3300009551 Bacteria 1911
56 Ga0105239_12007005 3300010375 Bacteria 672
57 Ga0105246_10042461 3300011119 Bacteria 3080
58 Ga0157370_10544593 3300013104 Bacteria 1064
59 Ga0157378_11802882 3300013297 Bacteria 660
60 Ga0163162_10024243 3300013306 Bacteria 5988
61 Ga0163162_12051132 3300013306 Bacteria 656
62 Ga0157375_10106767 3300013308 Bacteria 2892
63 Ga0154015_1658956 3300020610 Bacteria 832
64 Ga0209784_100645 3300025224 Bacteria 10459
65 Ga0209784_101469 3300025224 Bacteria 3108
66 Ga0209566_100024 3300025225 Bacteria 396318
67 Ga0209566_100029 3300025225 Bacteria 349213
68 Ga0209566_100191 3300025225 Bacteria 63470
69 Ga0209566_100332 3300025225 Bacteria 42137
70 Ga0209147_100029 3300025229 Bacteria 376498
71 Ga0209147_100058 3300025229 Bacteria 252750
72 Ga0209258_104006 3300025242 Bacteria 2940
73 Ga0209130_1017527 3300025284 Bacteria 1703
74 Ga0209130_1043031 3300025284 Bacteria 861
75 Ga0209675_1007824 3300025291 Bacteria 4027
76 Ga0209675_1010304 3300025291 Bacteria 3205
77 Ga0209676_1001852 3300025292 Bacteria 17435
78 Ga0209676_1023418 3300025292 Bacteria 2022
79 Ga0209676_1057864 3300025292 Bacteria 980
80 Ga0209025_1000001 3300025294 Bacteria 1888151
81 Ga0209025_1000136 3300025294 Bacteria 190335
82 Ga0209025_1005189 3300025294 Bacteria 10766
83 Ga0209025_1009479 3300025294 Bacteria 6773
84 Ga0209025_1011377 3300025294 Bacteria 5873
85 Ga0209025_1019976 3300025294 Bacteria 3691
86 Ga0209025_1039961 3300025294 Bacteria 2037
87 Ga0209051_1036135 3300025303 Bacteria 1828
88 Ga0207655_1001980 3300025728 Bacteria 17487
89 Ga0207655_1147892 3300025728 Bacteria 746
90 Ga0207688_10804815 3300025901 Bacteria 595
91 Ga0207643_10289436 3300025908 Bacteria 1017
92 Ga0207654_10010654 3300025911 Bacteria 4683
93 Ga0207695_10001465 3300025913 Bacteria 39532
94 Ga0207671_10002361 3300025914 Bacteria 20314
95 Ga0207671_10586462 3300025914 Bacteria 889
96 Ga0207694_10000271 3300025924 Bacteria 49284
97 Ga0207694_10006569 3300025924 Bacteria 8838
98 Ga0207650_10405851 3300025925 Bacteria 1128
99 Ga0207670_10434280 3300025936 Bacteria 1056
100 Ga0207669_11302686 3300025937 Bacteria 617
101 Ga0207661_10472332 3300025944 Bacteria 1144
102 Ga0207667_10000662 3300025949 Bacteria 44575
103 Ga0207667_10005212 3300025949 Bacteria 15860
104 Ga0207667_10086015 3300025949 Bacteria 3254
105 Ga0207640_10288744 3300025981 Bacteria 1292
106 Ga0207703_10802030 3300026035 Bacteria 899
107 Ga0207639_10076780 3300026041 Bacteria 2631
108 Ga0207678_10152275 3300026067 Bacteria 1975
109 Ga0207702_10000005 3300026078 Bacteria 420296
110 Ga0207641_10980941 3300026088 Bacteria 841
111 Ga0207674_10618755 3300026116 Bacteria 1046
112 Ga0207675_102234140 3300026118 Bacteria 562
113 Ga0207698_10165855 3300026142 Bacteria 1938
114 Ga0209974_10128405 3300027876 Bacteria 903
115 Ga0268264_10013955 3300028381 Bacteria 6605
116 Ga0265319_1036047 3300028563 Bacteria 1694
117 Ga0265318_10079994 3300028577 Bacteria 1207
118 Ga0265323_10019750 3300028653 Bacteria 2598
119 Ga0265323_10081550 3300028653 Bacteria 1092
120 Ga0265323_10147965 3300028653 Bacteria 753
121 Ga0265338_10242790 3300028800 Bacteria 1333
122 Ga0265330_10004243 3300031235 Bacteria 7309
123 Ga0265330_10021761 3300031235 Bacteria 2922
124 Ga0265330_10023926 3300031235 Bacteria 2771
125 Ga0265320_10010881 3300031240 Bacteria 5387
126 Ga0265320_10311450 3300031240 Bacteria 696
127 Ga0265316_10007477 3300031344 Bacteria 10288
128 Ga0265316_10174724 3300031344 Bacteria 1601
129 Ga0265316_10279706 3300031344 Bacteria 1219
130 Ga0265316_10770208 3300031344 Bacteria 676
131 Ga0307408_100104781 3300031548 Bacteria 2161
132 Ga0307408_101283627 3300031548 Bacteria 686
133 Ga0316575_10009818 3300031665 Bacteria 3511
134 Ga0265314_10069113 3300031711 Bacteria 2371
135 Ga0265342_10037840 3300031712 Bacteria 2940
136 Ga0265342_10073681 3300031712 Bacteria 1985
137 Ga0265342_10106121 3300031712 Bacteria 1594
138 Ga0316576_10205215 3300031727 Bacteria 1484
139 Ga0316576_10295112 3300031727 Bacteria 1212
140 Ga0316578_10004008 3300031728 Bacteria 6874
141 Ga0316578_10115995 3300031728 Bacteria 1609
142 Ga0316578_10237418 3300031728 Bacteria 1094
143 Ga0316578_10513100 3300031728 Bacteria 706
144 Ga0307416_100630103 3300032002 Bacteria 1155
145 Ga0307416_102435531 3300032002 Bacteria 623
146 Ga0316585_10002156 3300032137 Bacteria 5285
147 Ga0373923_0540611 3300035111 Bacteria 570
148 Ga0316574_0002175 3300035398 Bacteria 9726
149 Ga0316574_0029168 3300035398 Unclassified 3332
150 Ga0316574_0166734 3300035398 Bacteria 1419
151 Ga0316582_0014178 3300036647 Bacteria 4515
152 Ga0316584_0071656 3300036712 Bacteria 2596
153 Ga0316584_0130300 3300036712 Bacteria 1879
154 Ga0316584_0591939 3300036712 Bacteria 770
155 Ga0316584_0633228 3300036712 Bacteria 739
156 Ga0316584_1011596 3300036712 Bacteria 555
157 Ga0395899_0252317 3300037312 Bacteria 1210
158 Ga0395899_0275612 3300037312 Bacteria 1146
159 Ga0395899_0330976 3300037312 Bacteria 1023
160 Ga0395899_0628750 3300037312 Bacteria 681
161 Ga0395900_0192278 3300037418 Bacteria 2069
162 Ga0395900_0352613 3300037418 Bacteria 1445
163 Ga0395898_0030024 3300037466 Bacteria 5442
164 Ga0395898_0510364 3300037466 Bacteria 1143
165 Ga0436364_0256513 3300037853 Bacteria 2127
166 Ga0395901_0028054 3300038443 Bacteria 5790
167 Ga0395901_1407116 3300038443 Bacteria 656
168 Ga0395901_1824607 3300038443 Bacteria 557
169 Ga0451802_1052305 3300041460 Bacteria 619
170 Ga0439462_0032060 3300042015 Bacteria 1393
171 Ga0451577_0000220 3300042876 Bacteria 117909
172 Ga0451577_0214346 3300042876 Bacteria 1740
173 Ga0451577_0352875 3300042876 Bacteria 1334
174 Ga0451577_0509876 3300042876 Bacteria 1092
175 Ga0466969_0128646 3300044656 Bacteria 1175
176 Ga0466969_0155937 3300044656 Bacteria 1050
177 Ga0453683_0000106 3300044673 Bacteria 124433
178 Ga0453683_0000116 3300044673 Bacteria 117881
179 Ga0453683_0028035 3300044673 Bacteria 3567
180 Ga0453683_0183699 3300044673 Bacteria 1326
181 Ga0453683_0390222 3300044673 Bacteria 897
182 Ga0453684_0000201 3300044712 Bacteria 262283
183 Ga0453684_0000711 3300044712 Bacteria 117909
184 Ga0453684_0040839 3300044712 Bacteria 6290
185 Ga0453684_0178869 3300044712 Bacteria 2492
186 Ga0453684_0186453 3300044712 Bacteria 2431
187 Ga0453684_0199088 3300044712 Bacteria 2336
188 Ga0453684_0817929 3300044712 Bacteria 1003
189 Ga0453684_1076075 3300044712 Bacteria 851
190 Ga0453684_1210260 3300044712 Bacteria 792
191 Ga0466957_0079577 3300044842 Bacteria 2040
192 Ga0451576_0000173 3300045051 Bacteria 162072
193 Ga0451576_0000293 3300045051 Bacteria 122443
194 Ga0451576_0002560 3300045051 Bacteria 26831
195 Ga0451576_0033739 3300045051 Bacteria 5439
196 Ga0451576_0125700 3300045051 Bacteria 2672
197 Ga0451576_0138093 3300045051 Bacteria 2542
198 Ga0451576_0144221 3300045051 Bacteria 2483
199 Ga0466967_0178290 3300045976 Bacteria 2003
200 Ga0466967_1874308 3300045976 Bacteria 596
201 Ga0495654_0213840 3300046530 Bacteria 819
202 Ga0495640_0527592 3300046533 Bacteria 717
203 Ga0495645_0546002 3300046543 Bacteria 719
204 Ga0495622_0257908 3300046557 Bacteria 766
205 Ga0495656_0120213 3300046615 Bacteria 1239
206 Ga0495668_0417394 3300046616 Bacteria 738
207 Ga0495658_1042984 3300046683 Bacteria 522
208 Ga0495613_0980581 3300046689 Bacteria 544
209 Ga0495660_0030285 3300046810 Bacteria 3049
210 Ga0495660_0043904 3300046810 Bacteria 2462
211 Ga0495626_0017038 3300048091 Bacteria 3676
212 Ga0495626_0142640 3300048091 Bacteria 1015
213 Ga0496100_0223282 3300048903 Bacteria 1383
214 Ga0496100_1230583 3300048903 Bacteria 591
215 Ga0496101_0086943 3300048904 Bacteria 2319
216 Ga0496101_0354398 3300048904 Bacteria 1153
217 Ga0496101_0413679 3300048904 Bacteria 1063
218 Ga0496102_0017161 3300048905 Bacteria 6339
219 Ga0496102_0094018 3300048905 Bacteria 2777
220 Ga0496102_0278557 3300048905 Bacteria 1576
221 Ga0496103_0039982 3300048906 Bacteria 2882
222 Ga0496103_0119930 3300048906 Bacteria 1675
223 Ga0496103_0537598 3300048906 Bacteria 747
224 Ga0496105_0107856 3300048908 Bacteria 2299
225 Ga0496106_0004726 3300048909 Bacteria 10078
226 Ga0496107_0011353 3300048910 Bacteria 6200
227 Ga0496109_0020571 3300048912 Bacteria 5829
228 Ga0496109_1408584 3300048912 Bacteria 632
229 Ga0496110_0118191 3300048913 Bacteria 2387
230 Ga0496110_0290008 3300048913 Bacteria 1490
231 Ga0496110_1169443 3300048913 Bacteria 678
232 Ga0496111_0014499 3300048914 Bacteria 5386
233 Ga0496111_0521388 3300048914 Bacteria 874
234 Ga0496112_0006505 3300048915 Bacteria 10272
235 Ga0496112_0132307 3300048915 Bacteria 2465
236 Ga0496113_0583319 3300048916 Bacteria 896
237 Ga0496114_0049210 3300048917 Bacteria 3507
238 Ga0496116_0017538 3300048919 Bacteria 5550
239 Ga0496116_0045359 3300048919 Bacteria 2976
240 Ga0496116_0120461 3300048919 Bacteria 1520
241 Ga0496116_0193035 3300048919 Bacteria 1075
242 Ga0496117_0018821 3300048920 Bacteria 5700
243 Ga0496117_0050260 3300048920 Bacteria 2957
244 Ga0496118_0014821 3300048921 Bacteria 7270
245 Ga0496118_0080285 3300048921 Bacteria 2296
246 Ga0496119_0113471 3300048922 Bacteria 1500
247 Ga0496119_0143395 3300048922 Bacteria 1287
248 Ga0496120_0007587 3300048923 Bacteria 8044
249 Ga0496121_0014370 3300048924 Bacteria 8407
250 Ga0496121_0029077 3300048924 Bacteria 5123
251 Ga0496121_0032365 3300048924 Bacteria 4754
252 Ga0496122_0050865 3300048925 Bacteria 3155
253 Ga0496122_0058491 3300048925 Bacteria 2853
254 Ga0496123_0008916 3300048926 Bacteria 9118
255 Ga0496123_0069236 3300048926 Bacteria 2217
256 Ga0496124_0000456 3300048927 Bacteria 71405
257 Ga0496124_0193993 3300048927 Bacteria 1551
258 Ga0496125_0000188 3300048928 Bacteria 134959
259 Ga0496125_0056055 3300048928 Bacteria 3204
260 Ga0496125_0087772 3300048928 Bacteria 2347
261 Ga0496126_0000037 3300048929 Bacteria 353425
262 Ga0496126_0062744 3300048929 Bacteria 3333
263 Ga0496126_0072624 3300048929 Bacteria 3060
264 Ga0496126_0546273 3300048929 Bacteria 920
265 Ga0501068_0973515 3300049584 Bacteria 559
266 Ga0501069_0003391 3300049585 Bacteria 8182
267 Ga0501070_0000125 3300049586 Bacteria 68640
268 Ga0501073_0005293 3300049589 Bacteria 9675
269 Ga0501208_013799 3300049655 Bacteria 1212
270 Ga0501217_008175 3300049661 Bacteria 2255
271 Ga0501079_0881141 3300049741 Bacteria 705
272 Ga0501080_0033882 3300049742 Bacteria 4768
273 Ga0501081_0081669 3300049743 Bacteria 2264
274 Ga0501083_0006728 3300049744 Bacteria 8155
275 Ga0501212_045168 3300049851 Bacteria 736
276 nmdc:mga09592_1234085_c1 3300050508 Bacteria 617
277 Ga0501082_0004542 3300060353 Bacteria 12116
278 2524189735 2524023129 Bacteria 6762600
279 2550902425 2548877040 Bacteria 7507281
280 2555470355 2554235283 Bacteria 3683090
281 2556065574 2554235469 Bacteria 3590176
282 2563929356 2563366752 Bacteria 4961801
283 2571528743 2571042143 Bacteria 6986194
284 2587742625 2585428059 Bacteria 8696589
285 2595090729 2593339131 Bacteria 5116855
286 2595318354 2593339198 Bacteria 7267884
287 2595319313 2593339198 Bacteria 7267884
288 2601637947 2600255286 Bacteria 5390125
289 2644423748 2643221676 Bacteria 8119172
290 2644740166 2643221735 Bacteria 3676263
291 2673819169 2671180694 Bacteria 7506943
292 2723602496 2721755693 Bacteria 6126117
293 2723606817 2721755693 Bacteria 6126117
294 2728535022 2728368933 Bacteria 7044283
295 2730137391 2728369359 Bacteria 5621728
296 2738816265 2738541295 Bacteria 5730091
297 2738840492 2738541299 Bacteria 4020721
298 2739270552 2738543017 Bacteria 4271950
299 2757568694 2757320391 Bacteria 4746095
300 2777763686 2775507177 Bacteria 4384303
301 2777836428 2775507192 Bacteria 4622234
302 2793183159 2791355222 Bacteria 5898266
303 2802437521 2802428803 Bacteria 5806948
304 2817482360 2816332295 Bacteria 4352468
305 2819569033 2818991441 Bacteria 5062707
306 2819669458 2818991459 Bacteria 8736032
307 2819674325 2818991459 Bacteria 8736032
308 2819724965 2818991468 Bacteria 3723169
309 2857458702 2857453340 Bacteria 8090534
310 2857458714 2857453340 Bacteria 8090534
311 2857474297 2857472729 Bacteria 6568124
312 2857589923 2857586860 Bacteria 4354574
313 2864736398 2864733723 Bacteria 6770668
314 2865005067 2865002811 Bacteria 6333767
315 2881648894 2881644220 Bacteria 5302661
316 2888578865 2888578766 Bacteria 6743310
317 2889052621 2889049205 Bacteria 7524325
318 2889054147 2889049205 Bacteria 7524325
319 2889277366 2889276214 Bacteria 5979355
320 2897113716 2897109615 Bacteria 4009619
321 2904116358 2904113452 Bacteria 7796941
322 2904600365 2904595352 Bacteria 6124848
323 2904762665 2904755435 Bacteria 7986759
324 2904780247 2904776348 Bacteria 4658726
325 2907202875 2907202186 Bacteria 6632024
326 2908665543 2908665501 Bacteria 3678115
327 2919094355 2919093281 Bacteria 3660974
328 2919416914 2919414237 Bacteria 5429133
329 2919430369 2919425241 Bacteria 8055701
330 2929208040 2929206907 Bacteria 5918291
331 2936342753 2936340661 Bacteria 5139038
332 2936363479 2936361878 Bacteria 5632809
333 2938655553 2938649242 Bacteria 7118381
334 2939703328 2939702853 Bacteria 5139229
335 2954774296 2954773129 Bacteria 3741715
336 2968565002 2968558590 Bacteria 6956864
337 2971406242 2971403814 Bacteria 7370929
338 2971414828 2971410472 Bacteria 8311090
339 2971414840 2971410472 Bacteria 8311090
340 2977259389 2977254563 Bacteria 4828420
341 2980183874 2980182181 Bacteria 9454109
342 2988231380 2988225383 Bacteria 7221625
343 2990280417 2990275345 Bacteria 4887158
344 2996633461 2996632988 Bacteria 6921523
345 2996707990 2996706504 Bacteria 5757485
346 3001270903 3001267043 Bacteria 4823521
347 3001275515 3001272096 Bacteria 4729684
348 3001896306 3001892409 Bacteria 6328293
349 3001898513 3001892409 Bacteria 6328293
350 3006977858 3006973921 Bacteria 4423788
351 3006982972 3006978542 Bacteria 5328100
352 3006985161 3006984091 Bacteria 4207523
353 3006990305 3006988479 Bacteria 4767936
354 648172764 648028048 Bacteria 5394884
355 8002319539 8002317523 Bacteria 8051857
356 8007372724 8007371054 Bacteria 4849201
357 8007377216 8007375930 Bacteria 4080554
358 8046996376 8046991243 Bacteria 8497463
359 8051953802 8051952484 Bacteria 3926774
360 8054468635 8054465665 Bacteria 7323556
361 8054795662 8054795415 Bacteria 9785225
362 8054797578 8054795415 Bacteria 9785225
363 8056539407 8056533031 Bacteria 8964429
364 8056539423 8056533031 Bacteria 8964429
365 8057476445 8057473075 Bacteria 5892720
366 8057982297 8057977335 Bacteria 5694872
367 Ga0496116_0052860
368 SwRhRL2b_contig_1658188
369 JGI25159J45721_1057015
370 JGI25151J46595_10000012
371 JGI25151J46595_10005006
372 JGI25151J46595_10007572
373 JGI25151J46595_10024474
374 JGI25151J46595_10031083
375 JGI25151J46595_10078938
376 JGI25151J46595_10136767
377 Ga0006562J51391_1009104
378 Ga0055538_1000708
379 Ga0055532_1000187
380 Ga0055532_1002054
381 Ga0055535_1008984
382 Ga0055536_1006956
383 Ga0055541_1003042
384 Ga0055541_1006145
385 Ga0065704_10077572
386 Ga0070683_100813177
387 Ga0070670_100490872
388 Ga0070677_10013856
389 Ga0070674_100787225
390 Ga0070685_10016005
391 Ga0068853_100154771
392 Ga0068855_100000012
393 Ga0068855_100111954
394 Ga0068855_100309422
395 Ga0068857_100027809
396 Ga0068854_100052633
397 Ga0068854_100130435
398 Ga0068856_100312238
399 Ga0068856_100370326
400 Ga0068852_100069919
401 Ga0068852_100275136
402 Ga0068859_100033354
403 Ga0068863_100329654
404 Ga0068860_100003490
405 Ga0070717_10711646
406 Ga0075364_10732097
407 Ga0070712_101661872
408 Ga0097621_101466272
409 Ga0075430_100184058
410 Ga0075431_100522868
411 Ga0097620_100033352
412 Ga0105244_10002620
413 Ga0105244_10053121
414 Ga0105244_10070733
415 Ga0105240_10007334
416 Ga0114129_11519495
417 Ga0105241_10003633
418 Ga0105237_10000050
419 Ga0105237_10000631
420 Ga0105238_10005053
421 Ga0105238_10212454
422 Ga0105239_12007005
423 Ga0105246_10042461
424 Ga0157370_10544593
425 Ga0157378_11802882
426 Ga0163162_10024243
427 Ga0163162_12051132
428 Ga0157375_10106767
429 Ga0154015_1658956
430 Ga0209784_100645
431 Ga0209784_101469
432 Ga0209566_100024
433 Ga0209566_100029
434 Ga0209566_100191
435 Ga0209566_100332
436 Ga0209147_100029
437 Ga0209147_100058
438 Ga0209258_104006
439 Ga0209130_1017527
440 Ga0209130_1043031
441 Ga0209675_1007824
442 Ga0209675_1010304
443 Ga0209676_1001852
444 Ga0209676_1023418
445 Ga0209676_1057864
446 Ga0209025_1000001
447 Ga0209025_1000136
448 Ga0209025_1005189
449 Ga0209025_1009479
450 Ga0209025_1011377
451 Ga0209025_1019976
452 Ga0209025_1039961
453 Ga0209051_1036135
454 Ga0207655_1001980
455 Ga0207655_1147892
456 Ga0207688_10804815
457 Ga0207643_10289436
458 Ga0207654_10010654
459 Ga0207695_10001465
460 Ga0207671_10002361
461 Ga0207671_10586462
462 Ga0207694_10000271
463 Ga0207694_10006569
464 Ga0207650_10405851
465 Ga0207670_10434280
466 Ga0207669_11302686
467 Ga0207661_10472332
468 Ga0207667_10000662
469 Ga0207667_10005212
470 Ga0207667_10086015
471 Ga0207640_10288744
472 Ga0207703_10802030
473 Ga0207639_10076780
474 Ga0207678_10152275
475 Ga0207702_10000005
476 Ga0207641_10980941
477 Ga0207674_10618755
478 Ga0207675_102234140
479 Ga0207698_10165855
480 Ga0209974_10128405
481 Ga0268264_10013955
482 Ga0265319_1036047
483 Ga0265318_10079994
484 Ga0265323_10019750
485 Ga0265323_10081550
486 Ga0265323_10147965
487 Ga0265338_10242790
488 Ga0265330_10004243
489 Ga0265330_10021761
490 Ga0265330_10023926
491 Ga0265320_10010881
492 Ga0265320_10311450
493 Ga0265316_10007477
494 Ga0265316_10174724
495 Ga0265316_10279706
496 Ga0265316_10770208
497 Ga0307408_100104781
498 Ga0307408_101283627
499 Ga0316575_10009818
500 Ga0265314_10069113
501 Ga0265342_10037840
502 Ga0265342_10073681
503 Ga0265342_10106121
504 Ga0316576_10205215
505 Ga0316576_10295112
506 Ga0316578_10004008
507 Ga0316578_10115995
508 Ga0316578_10237418
509 Ga0316578_10513100
510 Ga0307416_100630103
511 Ga0307416_102435531
512 Ga0316585_10002156
513 Ga0373923_0540611
514 Ga0316574_0002175
515 Ga0316574_0029168
516 Ga0316574_0166734
517 Ga0316582_0014178
518 Ga0316584_0071656
519 Ga0316584_0130300
520 Ga0316584_0591939
521 Ga0316584_0633228
522 Ga0316584_1011596
523 Ga0395899_0252317
524 Ga0395899_0275612
525 Ga0395899_0330976
526 Ga0395899_0628750
527 Ga0395900_0192278
528 Ga0395900_0352613
529 Ga0395898_0030024
530 Ga0395898_0510364
531 Ga0436364_0256513
532 Ga0395901_0028054
533 Ga0395901_1407116
534 Ga0395901_1824607
535 Ga0451802_1052305
536 Ga0439462_0032060
537 Ga0451577_0000220
538 Ga0451577_0214346
539 Ga0451577_0352875
540 Ga0451577_0509876
541 Ga0466969_0128646
542 Ga0466969_0155937
543 Ga0453683_0000106
544 Ga0453683_0000116
545 Ga0453683_0028035
546 Ga0453683_0183699
547 Ga0453683_0390222
548 Ga0453684_0000201
549 Ga0453684_0000711
550 Ga0453684_0040839
551 Ga0453684_0178869
552 Ga0453684_0186453
553 Ga0453684_0199088
554 Ga0453684_0817929
555 Ga0453684_1076075
556 Ga0453684_1210260
557 Ga0466957_0079577
558 Ga0451576_0000173
559 Ga0451576_0000293
560 Ga0451576_0002560
561 Ga0451576_0033739
562 Ga0451576_0125700
563 Ga0451576_0138093
564 Ga0451576_0144221
565 Ga0466967_0178290
566 Ga0466967_1874308
567 Ga0495654_0213840
568 Ga0495640_0527592
569 Ga0495645_0546002
570 Ga0495622_0257908
571 Ga0495656_0120213
572 Ga0495668_0417394
573 Ga0495658_1042984
574 Ga0495613_0980581
575 Ga0495660_0030285
576 Ga0495660_0043904
577 Ga0495626_0017038
578 Ga0495626_0142640
579 Ga0496100_0223282
580 Ga0496100_1230583
581 Ga0496101_0086943
582 Ga0496101_0354398
583 Ga0496101_0413679
584 Ga0496102_0017161
585 Ga0496102_0094018
586 Ga0496102_0278557
587 Ga0496103_0039982
588 Ga0496103_0119930
589 Ga0496103_0537598
590 Ga0496105_0107856
591 Ga0496106_0004726
592 Ga0496107_0011353
593 Ga0496109_0020571
594 Ga0496109_1408584
595 Ga0496110_0118191
596 Ga0496110_0290008
597 Ga0496110_1169443
598 Ga0496111_0014499
599 Ga0496111_0521388
600 Ga0496112_0006505
601 Ga0496112_0132307
602 Ga0496113_0583319
603 Ga0496114_0049210
604 Ga0496116_0017538
605 Ga0496116_0045359
606 Ga0496116_0120461
607 Ga0496116_0193035
608 Ga0496117_0018821
609 Ga0496117_0050260
610 Ga0496118_0014821
611 Ga0496118_0080285
612 Ga0496119_0113471
613 Ga0496119_0143395
614 Ga0496120_0007587
615 Ga0496121_0014370
616 Ga0496121_0029077
617 Ga0496121_0032365
618 Ga0496122_0050865
619 Ga0496122_0058491
620 Ga0496123_0008916
621 Ga0496123_0069236
622 Ga0496124_0000456
623 Ga0496124_0193993
624 Ga0496125_0000188
625 Ga0496125_0056055
626 Ga0496125_0087772
627 Ga0496126_0000037
628 Ga0496126_0062744
629 Ga0496126_0072624
630 Ga0496126_0546273
631 Ga0501068_0973515
632 Ga0501069_0003391
633 Ga0501070_0000125
634 Ga0501073_0005293
635 Ga0501208_013799
636 Ga0501217_008175
637 Ga0501079_0881141
638 Ga0501080_0033882
639 Ga0501081_0081669
640 Ga0501083_0006728
641 Ga0501212_045168
642 nmdc:mga09592_1234085_c1
643 Ga0501082_0004542
644 2524189735
645 2550902425
646 2555470355
647 2556065574
648 2563929356
649 2571528743
650 2587742625
651 2595090729
652 2595318354
653 2595319313
654 2601637947
655 2644423748
656 2644740166
657 2673819169
658 2723602496
659 2723606817
660 2728535022
661 2730137391
662 2738816265
663 2738840492
664 2739270552
665 2757568694
666 2777763686
667 2777836428
668 2793183159
669 2802437521
670 2817482360
671 2819569033
672 2819669458
673 2819674325
674 2819724965
675 2857458702
676 2857458714
677 2857474297
678 2857589923
679 2864736398
680 2865005067
681 2881648894
682 2888578865
683 2889052621
684 2889054147
685 2889277366
686 2897113716
687 2904116358
688 2904600365
689 2904762665
690 2904780247
691 2907202875
692 2908665543
693 2919094355
694 2919416914
695 2919430369
696 2929208040
697 2936342753
698 2936363479
699 2938655553
700 2939703328
701 2954774296
702 2968565002
703 2971406242
704 2971414828
705 2971414840
706 2977259389
707 2980183874
708 2988231380
709 2990280417
710 2996633461
711 2996707990
712 3001270903
713 3001275515
714 3001896306
715 3001898513
716 3006977858
717 3006982972
718 3006985161
719 3006990305
720 648172764
721 8002319539
722 8007372724
723 8007377216
724 8046996376
725 8051953802
726 8054468635
727 8054795662
728 8054797578
729 8056539407
730 8056539423
731 8057476445
732 8057982297

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
2r9y-assembly1.cif.gz_A structure of antiplasmin 0.7203 81 108
6icp-assembly1.cif.gz_A-2 pseudomonas putida cbb5 ndma ql mutant with caffeine 0.7013 81 152
6icp-assembly1.cif.gz_B pseudomonas putida cbb5 ndma ql mutant with caffeine 0.6978 81 152
3rpx-assembly1.cif.gz_C error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.6872 73 122
6b9p-assembly1.cif.gz_B structure of gh 38 jack bean alpha-mannosidase in complex with a 36-valent iminosugar cluster inhibitor 0.6543 84 132
ID Description Score Start End Superfamily
af_O09159_605_867_2.70.98.30 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Golgi alpha-mannosidase II; domain 4 0.7127 77 122 2.70.98.30
3rpxC00 Alpha Beta;Roll;Mitochondrial Matrix Protein; Chain A;Mitochondrial glycoprotein 0.6872 73 122 3.10.280.10
af_Q54NW3_426_724_2.130.10.130 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;Integrin alpha, N-terminal 0.6792 63 125 2.130.10.130
af_Q9W0M5_6_211_2.60.40.790 Mainly Beta;Sandwich;Immunoglobulin-like; 0.6748 76 128 2.60.40.790
1a87A01 Alpha Beta;2-Layer Sandwich;Arylsulfatase, C-terminal domain;Colicin 0.6448 80 131 3.30.1120.60
ID Description Score Start End GO Terms
AF-A0A0F2S9W5-F1-model_v4 Phage tail protein 1.001 29 159
AF-A0A521VY78-F1-model_v4 Phage tail protein 0.9966 7 159
AF-A0A7K0YW56-F1-model_v4 deleted 0.9861 7 132
AF-A0A087EEG3-F1-model_v4 Uncharacterized protein 0.9858 6 159
AF-A0A242H010-F1-model_v4 deleted 0.9856 7 91

Map