F424069

General Info

Members Datasets Scaffolds Average Seq Length
366 196 266 208

Family's Representative Sequence

Representative Sequence 3300032004|Ga0307414_10002789|Ga0307414_100027898
Length 244
Sequence MAQEIKNKPEQTAGLTQKEKEARKEEMVLFLSNSEEREALFSKANRQLVTDPLNDDNPITVQVLGICSALAITVQLEPAVVMNVIVSLLRNMIPNRIRIIVQLVVVAGLVALVDQILRAYAYDVSKQLSVFIGLIITNCIVMGRLEAFALGNKPWKSFLDGIGNGAGYGLILIIVAFFRELLGSGKLFGYEILGHKGATIAESTGLYALGYENNGLMLLSPMALIVVGIIIWVQRSRNRKLIEA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
3 2506520008 Serratia plymuthica AS12 Isolate Unclassified
4 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
5 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
6 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
7 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
8 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
9 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
10 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
11 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
12 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
13 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
14 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
15 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
16 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
17 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
18 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
19 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
20 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
21 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
22 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
23 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
24 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
25 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
26 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
27 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
28 2602042047 Enterobacter sp. NFIX59 Isolate Rhizoplane
29 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
30 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
31 2602042066 Enterobacter sp. NFIX45 Isolate Rhizoplane
32 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
33 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
34 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
35 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
36 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
37 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
38 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
39 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
40 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
41 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
42 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
43 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
44 2636415599 Klebsiella variicola DX120E Isolate Unclassified
45 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
46 2667528172 Enterobacteriaceae bacterium NFIX31 Isolate Rhizoplane
47 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
48 2681812866 Enterobacter asburiae NFIX55 Isolate Rhizoplane
49 2681812869 Enterobacter ludwigii NFPP41 Isolate Rhizoplane
50 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
51 2690315857 Rheinheimera sp. EpRS3 Isolate Unclassified
52 2751185917 Enterobacter sp. HK169 Isolate Unclassified
53 2765235842 Enterobacter ludwigii AA4 Isolate Unclassified
54 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
55 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
56 2775507074 Klebsiella sp. D5A Isolate Unclassified
57 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
58 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
59 2821118458 Enterobacter asburiae 609 Isolate Unclassified
60 2823373977 Enterobacter ludwigii NCR3 Isolate Rhizosphere
61 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
62 2844425489 Enterobacter cloacae SBP-8 Isolate Rhizosphere
63 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
64 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
65 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
66 2887630918 Psychrosphaera haliotis UCD-MCMsp1aY Isolate Unclassified
67 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
68 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
69 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
70 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
71 2919534386 Rheinheimera pacifica 3879 Isolate Unclassified
72 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
73 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
74 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
75 2923634449 Enterobacter kobei SLBN-76 Isolate Rhizosphere
76 2927833300 Enterobacter sp. SLBN-59 Isolate Rhizosphere
77 2932406140 Serratia sp. 2723 Isolate Rhizosphere
78 2937539931 Pantoea sp. LS15 Isolate Unclassified
79 2937967321 Serratia sp. YC16 Isolate Unclassified
80 2939577877 Serratia sp. 509 Isolate Rhizosphere
81 2939607340 Leclercia sp. 1548 Isolate Rhizosphere
82 2952252522 Salinicola sp. DM10 Isolate Unclassified
83 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
84 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
85 2974310843 Enterobacter sp. SORGH_AS 287 Isolate Unclassified
86 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
87 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
88 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
89 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
90 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
91 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
92 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
93 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
94 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
95 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
96 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
97 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
98 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
99 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
100 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
101 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
102 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
103 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
104 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
105 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
106 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
107 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
108 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
109 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
110 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
111 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
112 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
113 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
114 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
115 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
116 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
126 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
128 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
130 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
131 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
132 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
133 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
134 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
135 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
136 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
137 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
138 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
139 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
140 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
142 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
143 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
145 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
146 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
147 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
148 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
149 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
150 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
151 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
152 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
153 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
154 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
155 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
156 3300044669 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2E Metagenome Unclassified
157 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
158 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
159 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
160 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
161 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
162 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
163 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
164 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
165 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
166 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
167 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
170 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
171 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
172 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
173 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
174 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
175 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
176 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
177 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
178 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
181 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
182 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 640753048 Serratia proteamaculans 568 Isolate Endosphere
185 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified
186 8002745576 Marinomonas spartinae USM8 Isolate Rhizosphere
187 8004592986 Serratia sp. S119 Isolate Unclassified
188 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
189 8018221730 Enterobacter sp. CM29 Isolate Unclassified
190 8018405270 Enterobacter sp. 198 Isolate Rhizosphere
191 8054357960 Idiomarina rhizosphaerae M1R2S28 Isolate Rhizosphere
192 8055087960 Silvania hatchlandensis H19S6 Isolate Rhizosphere
193 8055092621 Silvania confinis H4N4 Isolate Rhizosphere
194 8055097453 Leclercia tamurae H6W5 Isolate Rhizosphere
195 8057160832 Larsenimonas rhizosphaerae GH2-1 Isolate Rhizosphere
196 8057304971 Scandinavium manionii H17S15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.49
Metatranscriptomes 2.19
Isolates 27.32

Biome Distribution

Category Percentage (%)
Aerial Root 0.55
Bulb 0
Endosphere 0.82
Nodule 3.28
Rhizoplane 12.57
Rhizosphere 57.92
Stem 0
Stem Tuber 0
Unclassified 24.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3092519 2162886007 Bacteria 2305
2 SwRhRL2b_contig_643333 2162886007 Bacteria 1441
3 rootH2_10260700 3300003320 Bacteria 2526
4 Ga0065704_10000322 3300005289 Bacteria 33111
5 Ga0065704_10007098 3300005289 Bacteria 3840
6 Ga0065704_10076342 3300005289 Bacteria 5157
7 Ga0070665_100000224 3300005548 Bacteria 94266
8 Ga0068857_100000071 3300005577 Bacteria 57954
9 Ga0075364_10002782 3300006051 Bacteria 9832
10 Ga0075428_100052139 3300006844 Unclassified 4485
11 Ga0075428_100430124 3300006844 Bacteria 1414
12 Ga0075430_100077136 3300006846 Bacteria 2793
13 Ga0075429_100310610 3300006880 Bacteria 1380
14 Ga0075429_100347122 3300006880 Bacteria 1299
15 Ga0079104_1002051 3300006946 Bacteria 11673
16 Ga0079104_1003769 3300006946 Bacteria 6832
17 Ga0079104_1005511 3300006946 Bacteria 5038
18 Ga0079104_1056024 3300006946 Bacteria 863
19 Ga0105251_10000073 3300009011 Bacteria 97270
20 Ga0105251_10001999 3300009011 Bacteria 16568
21 Ga0105251_10002285 3300009011 Bacteria 15183
22 Ga0105251_10003081 3300009011 Bacteria 12387
23 Ga0105251_10005835 3300009011 Bacteria 7976
24 Ga0105251_10010657 3300009011 Bacteria 5310
25 Ga0105251_10018907 3300009011 Bacteria 3652
26 Ga0105244_10000041 3300009036 Bacteria 155525
27 Ga0105244_10000437 3300009036 Bacteria 38343
28 Ga0105244_10002065 3300009036 Bacteria 15469
29 Ga0105244_10004053 3300009036 Bacteria 10232
30 Ga0105244_10034242 3300009036 Bacteria 2676
31 Ga0105250_10000750 3300009092 Bacteria 19724
32 Ga0105250_10082839 3300009092 Bacteria 1301
33 Ga0105240_10107384 3300009093 Bacteria 3384
34 Ga0111539_10002785 3300009094 Bacteria 23212
35 Ga0111539_10029658 3300009094 Bacteria 6660
36 Ga0105245_10939191 3300009098 Bacteria 908
37 Ga0105247_10000983 3300009101 Bacteria 21475
38 Ga0105243_10297365 3300009148 Bacteria 1461
39 Ga0105243_11020395 3300009148 Bacteria 831
40 Ga0105241_10000004 3300009174 Bacteria 803007
41 Ga0157373_10023797 3300013100 Bacteria 4438
42 Ga0157371_10046895 3300013102 Bacteria 3071
43 Ga0157371_10119574 3300013102 Bacteria 1873
44 Ga0157370_10004333 3300013104 Bacteria 16313
45 Ga0157370_11058508 3300013104 Bacteria 733
46 Ga0157380_10027102 3300014326 Unclassified 4355
47 Ga0183366_1001 3300015679 Bacteria 2743932
48 Ga0183370_1001 3300015680 Bacteria 2743932
49 Ga0183369_1001 3300015685 Bacteria 2743932
50 Ga0183368_1001 3300015687 Bacteria 2743932
51 Ga0163161_10000107 3300017792 Bacteria 78998
52 Ga0207656_10063657 3300025321 Bacteria 1624
53 Ga0207696_1000033 3300025711 Bacteria 360689
54 Ga0207655_1000087 3300025728 Bacteria 205876
55 Ga0207655_1000121 3300025728 Bacteria 155535
56 Ga0207655_1000210 3300025728 Bacteria 102315
57 Ga0207655_1000538 3300025728 Bacteria 47965
58 Ga0207655_1000958 3300025728 Bacteria 29780
59 Ga0207713_1000038 3300025735 Bacteria 247609
60 Ga0207713_1000065 3300025735 Bacteria 196128
61 Ga0207713_1000108 3300025735 Bacteria 137268
62 Ga0207713_1000191 3300025735 Bacteria 85634
63 Ga0207713_1000638 3300025735 Bacteria 33958
64 Ga0207713_1004972 3300025735 Bacteria 8490
65 Ga0207713_1012369 3300025735 Bacteria 4569
66 Ga0207710_10000016 3300025900 Bacteria 388568
67 Ga0207654_10000006 3300025911 Bacteria 815027
68 Ga0207695_10182323 3300025913 Bacteria 2020
69 Ga0207709_10021272 3300025935 Bacteria 3671
70 Ga0207674_10000067 3300026116 Bacteria 107803
71 Ga0209281_1000008 3300027111 Bacteria 867470
72 Ga0209281_1000205 3300027111 Bacteria 133809
73 Ga0209281_1000232 3300027111 Bacteria 117627
74 Ga0209281_1000501 3300027111 Bacteria 52014
75 Ga0209281_1000600 3300027111 Bacteria 40931
76 Ga0209281_1001800 3300027111 Bacteria 10708
77 Ga0209281_1001990 3300027111 Bacteria 9395
78 Ga0209281_1031124 3300027111 Bacteria 953
79 Ga0209371_1000001 3300027312 Bacteria 2771503
80 Ga0209371_1000791 3300027312 Bacteria 26129
81 Ga0209371_1002211 3300027312 Bacteria 11298
82 Ga0209371_1007050 3300027312 Bacteria 4006
83 Ga0207428_10028463 3300027907 Bacteria 4643
84 Ga0268266_10000165 3300028379 Bacteria 122830
85 Ga0307515_10104128 3300028794 Bacteria 3395
86 Ga0307515_10387384 3300028794 Bacteria 1028
87 Ga0268256_1000001 3300030500 Bacteria 2771065
88 Ga0268256_1000665 3300030500 Bacteria 26134
89 Ga0268256_1001946 3300030500 Bacteria 11298
90 Ga0268256_1007195 3300030500 Bacteria 4006
91 Ga0265331_10036391 3300031250 Bacteria 2416
92 Ga0265331_10158048 3300031250 Bacteria 1028
93 Ga0265327_10000484 3300031251 Bacteria 70058
94 Ga0265327_10002418 3300031251 Bacteria 19750
95 Ga0265327_10002504 3300031251 Bacteria 19194
96 Ga0265327_10015980 3300031251 Bacteria 4803
97 Ga0265316_10000171 3300031344 Bacteria 73162
98 Ga0265316_10016253 3300031344 Bacteria 6460
99 Ga0265314_10044798 3300031711 Bacteria 3132
100 Ga0316576_10042766 3300031727 Bacteria 3266
101 Ga0316576_10049711 3300031727 Bacteria 3046
102 Ga0316576_10052593 3300031727 Bacteria 2966
103 Ga0316576_10075539 3300031727 Bacteria 2493
104 Ga0316576_10106630 3300031727 Bacteria 2098
105 Ga0316576_10119297 3300031727 Bacteria 1980
106 Ga0316576_10119561 3300031727 Bacteria 1978
107 Ga0316576_10566128 3300031727 Bacteria 832
108 Ga0316578_10152253 3300031728 Bacteria 1393
109 Ga0316578_10406541 3300031728 Bacteria 807
110 Ga0316577_10015696 3300031733 Bacteria 4167
111 Ga0307414_10000069 3300032004 Bacteria 98243
112 Ga0307414_10001172 3300032004 Bacteria 13453
113 Ga0307414_10002789 3300032004 Bacteria 9208
114 Ga0307414_10008466 3300032004 Bacteria 5833
115 Ga0307414_10057070 3300032004 Bacteria 2742
116 Ga0316583_10048172 3300032133 Bacteria 1501
117 Ga0316593_10028276 3300032168 Bacteria 1806
118 Ga0316593_10092968 3300032168 Bacteria 1063
119 Ga0316592_1000912 3300033524 Bacteria 4491
120 Ga0316592_1001777 3300033524 Bacteria 3588
121 Ga0316592_1006943 3300033524 Bacteria 2197
122 Ga0316592_1025109 3300033524 Bacteria 1284
123 Ga0316588_1004046 3300033528 Bacteria 2737
124 Ga0316596_1026681 3300033541 Bacteria 1489
125 Ga0316574_0004765 3300035398 Bacteria 7165
126 Ga0316574_0025282 3300035398 Bacteria 3563
127 Ga0316574_0077581 3300035398 Bacteria 2106
128 Ga0316574_0093171 3300035398 Bacteria 1923
129 Ga0316574_0108062 3300035398 Bacteria 1783
130 Ga0316574_0165434 3300035398 Bacteria 1424
131 Ga0316574_0419508 3300035398 Bacteria 841
132 Ga0316582_0004938 3300036647 Bacteria 6813
133 Ga0316582_0103221 3300036647 Bacteria 1891
134 Ga0316584_0077731 3300036712 Bacteria 2486
135 Ga0316584_0384807 3300036712 Bacteria 1002
136 Ga0316584_0499704 3300036712 Bacteria 855
137 Ga0316584_0545324 3300036712 Bacteria 810
138 Ga0400490_06685 3300038726 Bacteria 19071
139 Ga0400490_17765 3300038726 Bacteria 25873
140 Ga0400483_046831 3300039062 Bacteria 362835
141 Ga0400483_065463 3300039062 Bacteria 10859
142 Ga0400483_097903 3300039062 Bacteria 2441
143 Ga0400483_105299 3300039062 Bacteria 5163
144 Ga0400483_116226 3300039062 Bacteria 2244
145 Ga0400483_157860 3300039062 Bacteria 2029
146 Ga0400483_268200 3300039062 Bacteria 33279
147 Ga0400483_275271 3300039062 Bacteria 11505
148 Ga0400487_11018 3300039110 Bacteria 3254
149 Ga0451795_0591408 3300041456 Bacteria 1152
150 Ga0451795_1082339 3300041456 Bacteria 1381
151 Ga0451795_1286564 3300041456 Bacteria 881
152 Ga0451855_1124280 3300041511 Bacteria 950
153 Ga0451853_3828379 3300041512 Bacteria 1494
154 Ga0439432_008317 3300042006 Bacteria 3645
155 Ga0439452_000040 3300042010 Bacteria 143490
156 Ga0439452_000634 3300042010 Bacteria 17692
157 Ga0451577_0000821 3300042876 Bacteria 46554
158 Ga0451577_0001128 3300042876 Bacteria 37863
159 Ga0451577_0002813 3300042876 Bacteria 20055
160 Ga0451577_0022125 3300042876 Bacteria 5807
161 Ga0451577_0046905 3300042876 Bacteria 3864
162 Ga0451577_0052493 3300042876 Bacteria 3640
163 Ga0451577_0076756 3300042876 Bacteria 2979
164 Ga0451577_0081709 3300042876 Unclassified 2882
165 Ga0451577_0109682 3300042876 Bacteria 2468
166 Ga0451577_0421942 3300042876 Bacteria 1211
167 Ga0466981_0000011 3300044669 Bacteria 132904
168 Ga0453683_0000066 3300044673 Bacteria 164788
169 Ga0453683_0008478 3300044673 Bacteria 6896
170 Ga0453683_0009427 3300044673 Bacteria 6513
171 Ga0453683_0026877 3300044673 Bacteria 3653
172 Ga0453683_0080050 3300044673 Bacteria 2046
173 Ga0453683_0127725 3300044673 Bacteria 1601
174 Ga0453683_0482388 3300044673 Bacteria 804
175 Ga0453684_0000747 3300044712 Bacteria 113360
176 Ga0453684_0000994 3300044712 Bacteria 92499
177 Ga0453684_0001508 3300044712 Bacteria 65462
178 Ga0453684_0001740 3300044712 Bacteria 58254
179 Ga0453684_0002244 3300044712 Bacteria 47933
180 Ga0453684_0003476 3300044712 Bacteria 35373
181 Ga0453684_0005702 3300044712 Bacteria 24381
182 Ga0453684_0014915 3300044712 Bacteria 12357
183 Ga0453684_0018091 3300044712 Bacteria 10848
184 Ga0453684_0020881 3300044712 Bacteria 9830
185 Ga0453684_0023334 3300044712 Bacteria 9123
186 Ga0453684_0048575 3300044712 Bacteria 5608
187 Ga0453684_0058796 3300044712 Bacteria 4962
188 Ga0453684_0061874 3300044712 Bacteria 4801
189 Ga0453684_0068313 3300044712 Bacteria 4514
190 Ga0453684_0069172 3300044712 Bacteria 4479
191 Ga0453684_0211586 3300044712 Bacteria 2253
192 Ga0453684_0229466 3300044712 Bacteria 2144
193 Ga0453684_0294140 3300044712 Bacteria 1848
194 Ga0453684_0428172 3300044712 Bacteria 1477
195 Ga0451576_0000375 3300045051 Bacteria 105551
196 Ga0451576_0000480 3300045051 Bacteria 89291
197 Ga0451576_0001144 3300045051 Bacteria 47917
198 Ga0451576_0001529 3300045051 Bacteria 38932
199 Ga0451576_0010085 3300045051 Bacteria 10877
200 Ga0451576_0019934 3300045051 Bacteria 7310
201 Ga0451576_0028820 3300045051 Bacteria 5946
202 Ga0451576_0051796 3300045051 Bacteria 4303
203 Ga0451576_0068756 3300045051 Bacteria 3686
204 Ga0451576_0138068 3300045051 Bacteria 2542
205 Ga0451576_0141371 3300045051 Bacteria 2510
206 Ga0451576_0180969 3300045051 Bacteria 2201
207 Ga0495591_026464 3300046458 Bacteria 1801
208 Ga0495638_0005546 3300046460 Bacteria 9355
209 Ga0495650_0000205 3300046471 Bacteria 128197
210 Ga0495643_0056199 3300046522 Bacteria 2102
211 Ga0495654_0004088 3300046530 Bacteria 8755
212 Ga0495654_0090304 3300046530 Bacteria 1422
213 Ga0495649_0002182 3300046694 Bacteria 14003
214 Ga0495589_0000006 3300046794 Bacteria 303635
215 Ga0495679_002590 3300047446 Bacteria 9093
216 Ga0496104_0000172 3300048907 Bacteria 57392
217 Ga0496116_0000031 3300048919 Bacteria 420043
218 Ga0496116_0000411 3300048919 Bacteria 61137
219 Ga0496116_0012426 3300048919 Bacteria 6958
220 Ga0496117_0001450 3300048920 Bacteria 34200
221 Ga0496117_0002237 3300048920 Bacteria 24985
222 Ga0496117_0011015 3300048920 Bacteria 8142
223 Ga0496117_0022470 3300048920 Bacteria 5057
224 Ga0496118_0006246 3300048921 Bacteria 13168
225 Ga0496118_0040048 3300048921 Bacteria 3730
226 Ga0496119_0007985 3300048922 Bacteria 9409
227 Ga0496119_0008045 3300048922 Bacteria 9361
228 Ga0496119_0025168 3300048922 Bacteria 4163
229 Ga0496119_0314237 3300048922 Bacteria 768
230 Ga0496120_0002114 3300048923 Bacteria 21269
231 Ga0496120_0010990 3300048923 Bacteria 6256
232 Ga0496120_0012420 3300048923 Bacteria 5798
233 Ga0496120_0021295 3300048923 Bacteria 4099
234 Ga0496121_0002012 3300048924 Bacteria 32280
235 Ga0496121_0006333 3300048924 Bacteria 14754
236 Ga0496121_0013061 3300048924 Bacteria 8967
237 Ga0496121_0024550 3300048924 Bacteria 5759
238 Ga0496121_0032720 3300048924 Bacteria 4720
239 Ga0496121_0421259 3300048924 Bacteria 868
240 Ga0496122_0001840 3300048925 Bacteria 32325
241 Ga0496122_0013285 3300048925 Bacteria 8071
242 Ga0496122_0028226 3300048925 Bacteria 4770
243 Ga0496122_0055711 3300048925 Bacteria 2954
244 Ga0496122_0135888 3300048925 Bacteria 1549
245 Ga0496122_0387529 3300048925 Bacteria 714
246 Ga0496123_0001514 3300048926 Bacteria 32198
247 Ga0496123_0019855 3300048926 Bacteria 5275
248 Ga0496123_0031605 3300048926 Bacteria 3848
249 Ga0496124_0000217 3300048927 Bacteria 112197
250 Ga0496124_0001463 3300048927 Bacteria 34864
251 Ga0496124_0064556 3300048927 Bacteria 3055
252 Ga0496124_0301989 3300048927 Bacteria 1155
253 Ga0496125_0001164 3300048928 Bacteria 39824
254 Ga0496125_0008581 3300048928 Bacteria 10672
255 Ga0496125_0084718 3300048928 Bacteria 2405
256 Ga0496125_0084768 3300048928 Bacteria 2404
257 Ga0496126_0000613 3300048929 Bacteria 67220
258 Ga0496126_0003906 3300048929 Bacteria 18315
259 Ga0496126_0039492 3300048929 Bacteria 4378
260 Ga0496126_0243146 3300048929 Bacteria 1502
261 Ga0496126_0448622 3300048929 Bacteria 1038
262 Ga0501069_0135498 3300049585 Unclassified 1411
263 nmdc:mga00v17_12190_c1 3300050491 Bacteria 4740
264 nmdc:mga0qj67_226366_c1 3300050509 Unclassified 1518
265 nmdc:mga08y16_36834_c1 3300050511 Bacteria 5137
266 nmdc:mga08y16_8383_c1 3300050511 Bacteria 10814

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035398 Ga0316574_0165434 Ga0316574_0165434_28_570 161
2 3300035398 Ga0316574_0077581 Ga0316574_0077581_550_1194 167
3 3300041511 Ga0451855_1124280 Ga0451855_1124280_23_547 167
4 3300044673 Ga0453683_0482388 Ga0453683_0482388_64_711 173
5 3300039062 Ga0400483_116226 Ga0400483_116226_534_1187 177
6 3300044712 Ga0453684_0058796 Ga0453684_0058796_4127_4780 179
7 3300031250 Ga0265331_10036391 Ga0265331_100363913 180
8 3300031251 Ga0265327_10015980 Ga0265327_100159802 180
9 3300044712 Ga0453684_0014915 Ga0453684_0014915_3714_4367 182
10 3300039062 Ga0400483_046831 Ga0400483_046831_155444_156103 183
11 3300039062 Ga0400483_268200 Ga0400483_268200_7145_7804 183
12 3300031727 Ga0316576_10049711 Ga0316576_100497113 184
13 3300031733 Ga0316577_10015696 Ga0316577_100156962 184
14 3300035398 Ga0316574_0004765 Ga0316574_0004765_5672_6334 184
15 3300036647 Ga0316582_0103221 Ga0316582_0103221_1209_1871 184
16 3300031727 Ga0316576_10106630 Ga0316576_101066302 185
17 3300031728 Ga0316578_10406541 Ga0316578_104065411 185
18 3300036712 Ga0316584_0077731 Ga0316584_0077731_480_1142 185
19 3300042876 Ga0451577_0022125 Ga0451577_0022125_4302_4955 185
20 3300044712 Ga0453684_0001508 Ga0453684_0001508_23012_23665 185
21 3300038726 Ga0400490_17765 Ga0400490_17765_21981_22625 186
22 3300039062 Ga0400483_097903 Ga0400483_097903_88_750 186
23 3300039062 Ga0400483_157860 Ga0400483_157860_374_1036 186
24 3300042876 Ga0451577_0076756 Ga0451577_0076756_47_700 187
25 3300044673 Ga0453683_0000066 Ga0453683_0000066_72501_73154 187
26 3300044673 Ga0453683_0009427 Ga0453683_0009427_5736_6389 187
27 3300044673 Ga0453683_0026877 Ga0453683_0026877_1838_2491 187
28 3300044712 Ga0453684_0020881 Ga0453684_0020881_3732_4385 187
29 3300044712 Ga0453684_0023334 Ga0453684_0023334_6122_6775 187
30 3300045051 Ga0451576_0000375 Ga0451576_0000375_29277_29930 187
31 3300045051 Ga0451576_0001529 Ga0451576_0001529_18630_19283 187
32 3300045051 Ga0451576_0019934 Ga0451576_0019934_6120_6773 187
33 3300044673 Ga0453683_0127725 Ga0453683_0127725_117_773 188
34 3300044712 Ga0453684_0018091 Ga0453684_0018091_5004_5618 188
35 3300044712 Ga0453684_0428172 Ga0453684_0428172_36_692 188
36 3300044673 Ga0453683_0080050 Ga0453683_0080050_1257_1874 189
37 3300042876 Ga0451577_0000821 Ga0451577_0000821_28559_29191 190
38 3300044712 Ga0453684_0002244 Ga0453684_0002244_17365_17997 190
39 3300045051 Ga0451576_0001144 Ga0451576_0001144_29922_30554 190
40 3300031251 Ga0265327_10000484 Ga0265327_1000048415 193
41 3300031251 Ga0265327_10002504 Ga0265327_1000250411 193
42 3300031344 Ga0265316_10000171 Ga0265316_1000017149 193
43 3300041456 Ga0451795_1082339 Ga0451795_1082339_656_1267 193
44 3300039062 Ga0400483_065463 Ga0400483_065463_4420_5064 194
45 3300039062 Ga0400483_275271 Ga0400483_275271_5682_6326 194
46 3300044712 Ga0453684_0068313 Ga0453684_0068313_1818_2432 195
47 3300036712 Ga0316584_0384807 Ga0316584_0384807_306_968 196
48 3300041456 Ga0451795_0591408 Ga0451795_0591408_477_1100 196
49 3300009098 Ga0105245_10939191 Ga0105245_109391911 197
50 3300042876 Ga0451577_0046905 Ga0451577_0046905_1576_2190 197
51 3300044712 Ga0453684_0003476 Ga0453684_0003476_21744_22358 197
52 iso_pu_bacteria 2887630918 2887633373 197
53 iso_pu_bacteria 2894510363 2894511329 197
54 iso_pu_bacteria 2989392574 2989394901 197
55 iso_pu_bacteria 8002745576 8002747349 197
56 3300048923 Ga0496120_0021295 Ga0496120_0021295_98_736 198
57 iso_pu_bacteria 2833640130 2833640957 198
58 iso_pu_bacteria 2952252522 2952252593 198
59 iso_pu_bacteria 8057160832 8057161957 198
60 2162886007 SwRhRL2b_contig_643333 SwRhRL2b_0168.00002790 199
61 3300005289 Ga0065704_10007098 Ga0065704_100070983 199
62 3300005289 Ga0065704_10076342 Ga0065704_100763424 199
63 3300005577 Ga0068857_100000071 Ga0068857_10000007129 199
64 3300006946 Ga0079104_1003769 Ga0079104_10037695 199
65 3300006946 Ga0079104_1005511 Ga0079104_10055112 199
66 3300009036 Ga0105244_10004053 Ga0105244_100040535 199
67 3300009093 Ga0105240_10107384 Ga0105240_101073843 199
68 3300009148 Ga0105243_10297365 Ga0105243_102973652 199
69 3300013102 Ga0157371_10046895 Ga0157371_100468955 199
70 3300013104 Ga0157370_11058508 Ga0157370_110585081 199
71 3300015679 Ga0183366_1001 Ga0183366_100129 199
72 3300015680 Ga0183370_1001 Ga0183370_100129 199
73 3300015685 Ga0183369_1001 Ga0183369_100129 199
74 3300015687 Ga0183368_1001 Ga0183368_100129 199
75 3300025321 Ga0207656_10063657 Ga0207656_100636572 199
76 3300025728 Ga0207655_1000958 Ga0207655_10009587 199
77 3300025735 Ga0207713_1004972 Ga0207713_10049725 199
78 3300025913 Ga0207695_10182323 Ga0207695_101823232 199
79 3300025935 Ga0207709_10021272 Ga0207709_100212724 199
80 3300026116 Ga0207674_10000067 Ga0207674_1000006780 199
81 3300027111 Ga0209281_1000205 Ga0209281_100020570 199
82 3300027111 Ga0209281_1001800 Ga0209281_10018006 199
83 3300027312 Ga0209371_1000001 Ga0209371_100000130 199
84 3300027312 Ga0209371_1002211 Ga0209371_10022116 199
85 3300027312 Ga0209371_1007050 Ga0209371_10070503 199
86 3300030500 Ga0268256_1000001 Ga0268256_10000012611 199
87 3300030500 Ga0268256_1001946 Ga0268256_10019467 199
88 3300030500 Ga0268256_1007195 Ga0268256_10071953 199
89 3300032004 Ga0307414_10002789 Ga0307414_100027898 199
90 3300042006 Ga0439432_008317 Ga0439432_008317_2271_2909 199
91 3300042010 Ga0439452_000634 Ga0439452_000634_5720_6358 199
92 3300044669 Ga0466981_0000011 Ga0466981_0000011_55616_56254 199
93 3300044712 Ga0453684_0061874 Ga0453684_0061874_2166_2786 199
94 3300048919 Ga0496116_0012426 Ga0496116_0012426_3197_3835 199
95 3300048920 Ga0496117_0011015 Ga0496117_0011015_3210_3848 199
96 3300048920 Ga0496117_0022470 Ga0496117_0022470_163_801 199
97 3300048922 Ga0496119_0008045 Ga0496119_0008045_1795_2433 199
98 3300048922 Ga0496119_0025168 Ga0496119_0025168_3354_3992 199
99 3300048922 Ga0496119_0314237 Ga0496119_0314237_58_696 199
100 3300048923 Ga0496120_0002114 Ga0496120_0002114_2114_2752 199
101 3300048923 Ga0496120_0012420 Ga0496120_0012420_3566_4204 199
102 3300048924 Ga0496121_0006333 Ga0496121_0006333_7541_8179 199
103 3300048924 Ga0496121_0013061 Ga0496121_0013061_4830_5468 199
104 3300048924 Ga0496121_0024550 Ga0496121_0024550_832_1470 199
105 3300048924 Ga0496121_0032720 Ga0496121_0032720_3566_4204 199
106 3300048924 Ga0496121_0421259 Ga0496121_0421259_59_697 199
107 3300048925 Ga0496122_0013285 Ga0496122_0013285_4396_5034 199
108 3300048925 Ga0496122_0028226 Ga0496122_0028226_787_1425 199
109 3300048925 Ga0496122_0055711 Ga0496122_0055711_832_1470 199
110 3300048925 Ga0496122_0135888 Ga0496122_0135888_894_1532 199
111 3300048925 Ga0496122_0387529 Ga0496122_0387529_18_656 199
112 3300048926 Ga0496123_0019855 Ga0496123_0019855_1043_1681 199
113 3300048926 Ga0496123_0031605 Ga0496123_0031605_14_652 199
114 3300048927 Ga0496124_0001463 Ga0496124_0001463_6080_6718 199
115 3300048927 Ga0496124_0301989 Ga0496124_0301989_377_1015 199
116 3300048928 Ga0496125_0001164 Ga0496125_0001164_9765_10403 199
117 3300048928 Ga0496125_0008581 Ga0496125_0008581_5024_5662 199
118 3300048928 Ga0496125_0084718 Ga0496125_0084718_757_1395 199
119 3300048928 Ga0496125_0084768 Ga0496125_0084768_1626_2264 199
120 3300048929 Ga0496126_0000613 Ga0496126_0000613_61714_62352 199
121 3300048929 Ga0496126_0039492 Ga0496126_0039492_2221_2859 199
122 3300048929 Ga0496126_0448622 Ga0496126_0448622_309_947 199
123 iso_pu_bacteria 2506520007 2506576926 199
124 iso_pu_bacteria 2506520008 2506582064 199
125 iso_pu_bacteria 2508501071 2508850890 199
126 iso_pu_bacteria 2654587920 2656279296 199
127 iso_pu_bacteria 2687453601 2689443325 199
128 iso_pu_bacteria 2690315857 2691331035 199
129 iso_pu_bacteria 2772190666 2772437430 199
130 iso_pu_bacteria 2806310673 2807178308 199
131 iso_pu_bacteria 2869551831 2869552731 199
132 iso_pu_bacteria 2888366609 2888367469 199
133 iso_pu_bacteria 2916178963 2916181687 199
134 iso_pu_bacteria 2919534386 2919534592 199
135 iso_pu_bacteria 2919688452 2919689903 199
136 iso_pu_bacteria 2932406140 2932407530 199
137 iso_pu_bacteria 2937967321 2937969243 199
138 iso_pu_bacteria 2939577877 2939579440 199
139 iso_pu_bacteria 640753048 640936477 199
140 iso_pu_bacteria 8004592986 8004594135 199
141 iso_pu_bacteria 8015394850 8015397608 199
142 iso_pu_bacteria 8054357960 8054359917 199
143 3300032133 Ga0316583_10048172 Ga0316583_100481721 200
144 3300036647 Ga0316582_0004938 Ga0316582_0004938_3787_4407 200
145 3300038726 Ga0400490_06685 Ga0400490_06685_4494_5114 200
146 3300039110 Ga0400487_11018 Ga0400487_11018_1816_2439 200
147 3300042876 Ga0451577_0109682 Ga0451577_0109682_297_962 200
148 3300045051 Ga0451576_0000480 Ga0451576_0000480_86232_86897 200
149 3300031250 Ga0265331_10158048 Ga0265331_101580481 201
150 3300031727 Ga0316576_10042766 Ga0316576_100427664 201
151 3300031728 Ga0316578_10152253 Ga0316578_101522532 201
152 3300035398 Ga0316574_0093171 Ga0316574_0093171_735_1400 201
153 3300035398 Ga0316574_0108062 Ga0316574_0108062_785_1429 201
154 3300035398 Ga0316574_0419508 Ga0316574_0419508_130_795 201
155 3300039062 Ga0400483_105299 Ga0400483_105299_2725_3393 201
156 3300042876 Ga0451577_0001128 Ga0451577_0001128_12770_13438 201
157 3300044712 Ga0453684_0000747 Ga0453684_0000747_12770_13438 201
158 3300044712 Ga0453684_0069172 Ga0453684_0069172_1929_2555 201
159 3300044712 Ga0453684_0229466 Ga0453684_0229466_591_1259 201
160 3300045051 Ga0451576_0138068 Ga0451576_0138068_250_876 201
161 3300003320 rootH2_10260700 rootH2_102607003 202
162 3300006844 Ga0075428_100052139 Ga0075428_1000521392 202
163 3300006844 Ga0075428_100430124 Ga0075428_1004301242 202
164 3300006846 Ga0075430_100077136 Ga0075430_1000771362 202
165 3300006880 Ga0075429_100310610 Ga0075429_1003106102 202
166 3300006880 Ga0075429_100347122 Ga0075429_1003471222 202
167 3300009094 Ga0111539_10002785 Ga0111539_1000278518 202
168 3300009094 Ga0111539_10029658 Ga0111539_100296585 202
169 3300014326 Ga0157380_10027102 Ga0157380_100271024 202
170 3300027907 Ga0207428_10028463 Ga0207428_100284634 202
171 3300028794 Ga0307515_10104128 Ga0307515_101041284 202
172 3300028794 Ga0307515_10387384 Ga0307515_103873842 202
173 3300031344 Ga0265316_10016253 Ga0265316_100162535 202
174 3300031711 Ga0265314_10044798 Ga0265314_100447981 202
175 3300032004 Ga0307414_10001172 Ga0307414_100011722 202
176 3300033541 Ga0316596_1026681 Ga0316596_10266811 202
177 3300042876 Ga0451577_0052493 Ga0451577_0052493_706_1368 202
178 3300042876 Ga0451577_0081709 Ga0451577_0081709_1116_1799 202
179 3300042876 Ga0451577_0421942 Ga0451577_0421942_105_773 202
180 3300044673 Ga0453683_0008478 Ga0453683_0008478_1461_2123 202
181 3300044712 Ga0453684_0000994 Ga0453684_0000994_12526_13209 202
182 3300044712 Ga0453684_0048575 Ga0453684_0048575_4427_5089 202
183 3300045051 Ga0451576_0010085 Ga0451576_0010085_4674_5345 202
184 3300045051 Ga0451576_0028820 Ga0451576_0028820_2673_3335 202
185 3300045051 Ga0451576_0051796 Ga0451576_0051796_794_1477 202
186 3300045051 Ga0451576_0068756 Ga0451576_0068756_1501_2163 202
187 3300049585 Ga0501069_0135498 Ga0501069_0135498_477_1136 202
188 3300050509 nmdc:mga0qj67_226366_c1 nmdc:mga0qj67_226366_c1_758_1420 202
189 3300050511 nmdc:mga08y16_36834_c1 nmdc:mga08y16_36834_c1_4342_5004 202
190 3300050511 nmdc:mga08y16_8383_c1 nmdc:mga08y16_8383_c1_5270_5932 202
191 iso_pu_bacteria 2554235234 2555259627 202
192 iso_pu_bacteria 2599185169 2599413488 202
193 iso_pu_bacteria 2600255254 2601525892 202
194 iso_pu_bacteria 2600255255 2601530900 202
195 iso_pu_bacteria 2600255280 2601616810 202
196 iso_pu_bacteria 2600255281 2601621843 202
197 iso_pu_bacteria 2600255287 2601644789 202
198 iso_pu_bacteria 2600255288 2601651141 202
199 iso_pu_bacteria 2600255289 2601655167 202
200 iso_pu_bacteria 2600255290 2601661114 202
201 iso_pu_bacteria 2600255291 2601665241 202
202 iso_pu_bacteria 2600255298 2601697856 202
203 iso_pu_bacteria 2600255299 2601703244 202
204 iso_pu_bacteria 2600255300 2601709006 202
205 iso_pu_bacteria 2600255301 2601713995 202
206 iso_pu_bacteria 2600255302 2601719040 202
207 iso_pu_bacteria 2600255303 2601723405 202
208 iso_pu_bacteria 2600255304 2601728042 202
209 iso_pu_bacteria 2600255305 2601733985 202
210 iso_pu_bacteria 2600255306 2601739022 202
211 iso_pu_bacteria 2600255307 2601744188 202
212 iso_pu_bacteria 2600255309 2601754902 202
213 iso_pu_bacteria 2600255392 2602022100 202
214 iso_pu_bacteria 2602042047 2603643714 202
215 iso_pu_bacteria 2602042052 2603662039 202
216 iso_pu_bacteria 2602042053 2603666938 202
217 iso_pu_bacteria 2602042066 2603697935 202
218 iso_pu_bacteria 2602042067 2603702180 202
219 iso_pu_bacteria 2602042103 2603840791 202
220 iso_pu_bacteria 2602042104 2603845546 202
221 iso_pu_bacteria 2602042105 2603850620 202
222 iso_pu_bacteria 2602042106 2603856008 202
223 iso_pu_bacteria 2602042109 2603866489 202
224 iso_pu_bacteria 2602042110 2603873589 202
225 iso_pu_bacteria 2602042111 2603877407 202
226 iso_pu_bacteria 2603880178 2606050448 202
227 iso_pu_bacteria 2603880184 2606071368 202
228 iso_pu_bacteria 2603880202 2606148132 202
229 iso_pu_bacteria 2603880211 2606178658 202
230 iso_pu_bacteria 2636415599 2637226926 202
231 iso_pu_bacteria 2667528172 2671102055 202
232 iso_pu_bacteria 2675903046 2676410240 202
233 iso_pu_bacteria 2681812866 2681996056 202
234 iso_pu_bacteria 2681812869 2682009075 202
235 iso_pu_bacteria 2751185917 2753854768 202
236 iso_pu_bacteria 2765235842 2765587633 202
237 iso_pu_bacteria 2775506706 2775541960 202
238 iso_pu_bacteria 2775507074 2777023739 202
239 iso_pu_bacteria 2791354903 2791922919 202
240 iso_pu_bacteria 2821118458 2821118488 202
241 iso_pu_bacteria 2823373977 2823377249 202
242 iso_pu_bacteria 2844425489 2844426329 202
243 iso_pu_bacteria 2884086401 2884090268 202
244 iso_pu_bacteria 2884634485 2884636195 202
245 iso_pu_bacteria 2904513164 2904515189 202
246 iso_pu_bacteria 2919692658 2919696182 202
247 iso_pu_bacteria 2923634449 2923638181 202
248 iso_pu_bacteria 2927833300 2927835398 202
249 iso_pu_bacteria 2937539931 2937542725 202
250 iso_pu_bacteria 2939607340 2939610951 202
251 iso_pu_bacteria 2969079654 2969083937 202
252 iso_pu_bacteria 2971820967 2971825417 202
253 iso_pu_bacteria 2974310843 2974313431 202
254 iso_pu_bacteria 2984559226 2984561014 202
255 iso_pu_bacteria 2984595703 2984599087 202
256 iso_pu_bacteria 8018221730 8018222206 202
257 iso_pu_bacteria 8018405270 8018406648 202
258 iso_pu_bacteria 8055087960 8055090062 202
259 iso_pu_bacteria 8055092621 8055093162 202
260 iso_pu_bacteria 8055097453 8055101492 202
261 iso_pu_bacteria 8057304971 8057306430 202
262 3300006946 Ga0079104_1056024 Ga0079104_10560241 203
263 3300009011 Ga0105251_10000073 Ga0105251_100000737 203
264 3300009011 Ga0105251_10002285 Ga0105251_100022858 203
265 3300009011 Ga0105251_10003081 Ga0105251_100030818 203
266 3300009036 Ga0105244_10002065 Ga0105244_100020658 203
267 3300009092 Ga0105250_10000750 Ga0105250_100007503 203
268 3300009101 Ga0105247_10000983 Ga0105247_100009836 203
269 3300009174 Ga0105241_10000004 Ga0105241_1000000456 203
270 3300013100 Ga0157373_10023797 Ga0157373_100237973 203
271 3300017792 Ga0163161_10000107 Ga0163161_1000010714 203
272 3300025711 Ga0207696_1000033 Ga0207696_1000033294 203
273 3300025728 Ga0207655_1000210 Ga0207655_100021023 203
274 3300025735 Ga0207713_1000065 Ga0207713_100006571 203
275 3300025735 Ga0207713_1000108 Ga0207713_1000108127 203
276 3300025735 Ga0207713_1000638 Ga0207713_100063840 203
277 3300025900 Ga0207710_10000016 Ga0207710_1000001672 203
278 3300025911 Ga0207654_10000006 Ga0207654_1000000671 203
279 3300027111 Ga0209281_1000008 Ga0209281_1000008798 203
280 3300027111 Ga0209281_1031124 Ga0209281_10311241 203
281 3300031727 Ga0316576_10119561 Ga0316576_101195611 203
282 3300033524 Ga0316592_1001777 Ga0316592_10017773 203
283 3300033528 Ga0316588_1004046 Ga0316588_10040462 203
284 3300046530 Ga0495654_0004088 Ga0495654_0004088_7460_8089 203
285 3300046530 Ga0495654_0090304 Ga0495654_0090304_756_1385 203
286 3300046794 Ga0495589_0000006 Ga0495589_0000006_66261_66890 203
287 3300048919 Ga0496116_0000031 Ga0496116_0000031_66649_67278 203
288 3300048920 Ga0496117_0002237 Ga0496117_0002237_13932_14561 203
289 3300048921 Ga0496118_0040048 Ga0496118_0040048_170_799 203
290 3300031727 Ga0316576_10566128 Ga0316576_105661281 204
291 3300032004 Ga0307414_10000069 Ga0307414_1000006978 204
292 3300032004 Ga0307414_10008466 Ga0307414_100084664 204
293 3300032004 Ga0307414_10057070 Ga0307414_100570702 204
294 3300042876 Ga0451577_0002813 Ga0451577_0002813_9044_9724 204
295 3300044712 Ga0453684_0001740 Ga0453684_0001740_34591_35271 204
296 3300045051 Ga0451576_0141371 Ga0451576_0141371_724_1404 204
297 3300031251 Ga0265327_10002418 Ga0265327_1000241814 205
298 3300031727 Ga0316576_10052593 Ga0316576_100525932 205
299 3300031727 Ga0316576_10119297 Ga0316576_101192973 205
300 3300032168 Ga0316593_10092968 Ga0316593_100929682 205
301 3300033524 Ga0316592_1006943 Ga0316592_10069432 205
302 3300033524 Ga0316592_1025109 Ga0316592_10251092 205
303 3300035398 Ga0316574_0025282 Ga0316574_0025282_2288_2932 205
304 3300036712 Ga0316584_0545324 Ga0316584_0545324_15_659 205
305 3300041456 Ga0451795_1286564 Ga0451795_1286564_20_676 205
306 3300044712 Ga0453684_0005702 Ga0453684_0005702_10191_10853 205
307 3300044712 Ga0453684_0211586 Ga0453684_0211586_703_1353 205
308 3300045051 Ga0451576_0180969 Ga0451576_0180969_471_1124 205
309 iso_pu_bacteria 2919683626 2919687542 205
310 2162886007 SwRhRL2b_contig_3092519 SwRhRL2b_0249.00007210 206
311 3300005289 Ga0065704_10000322 Ga0065704_1000032214 206
312 3300005548 Ga0070665_100000224 Ga0070665_10000022428 206
313 3300006051 Ga0075364_10002782 Ga0075364_100027825 206
314 3300006946 Ga0079104_1002051 Ga0079104_10020518 206
315 3300009011 Ga0105251_10001999 Ga0105251_100019996 206
316 3300009011 Ga0105251_10005835 Ga0105251_100058352 206
317 3300009011 Ga0105251_10010657 Ga0105251_100106572 206
318 3300009011 Ga0105251_10018907 Ga0105251_100189072 206
319 3300009036 Ga0105244_10000041 Ga0105244_1000004135 206
320 3300009036 Ga0105244_10000437 Ga0105244_1000043724 206
321 3300009036 Ga0105244_10034242 Ga0105244_100342424 206
322 3300009092 Ga0105250_10082839 Ga0105250_100828391 206
323 3300009148 Ga0105243_11020395 Ga0105243_110203952 206
324 3300013102 Ga0157371_10119574 Ga0157371_101195741 206
325 3300013104 Ga0157370_10004333 Ga0157370_100043337 206
326 3300025728 Ga0207655_1000087 Ga0207655_100008736 206
327 3300025728 Ga0207655_1000121 Ga0207655_100012135 206
328 3300025728 Ga0207655_1000538 Ga0207655_100053833 206
329 3300025735 Ga0207713_1000038 Ga0207713_100003821 206
330 3300025735 Ga0207713_1000191 Ga0207713_100019157 206
331 3300025735 Ga0207713_1012369 Ga0207713_10123694 206
332 3300027111 Ga0209281_1000232 Ga0209281_100023273 206
333 3300027111 Ga0209281_1000501 Ga0209281_100050138 206
334 3300027111 Ga0209281_1000600 Ga0209281_100060038 206
335 3300027111 Ga0209281_1001990 Ga0209281_10019907 206
336 3300027312 Ga0209371_1000791 Ga0209371_100079126 206
337 3300028379 Ga0268266_10000165 Ga0268266_1000016528 206
338 3300030500 Ga0268256_1000665 Ga0268256_10006656 206
339 3300031727 Ga0316576_10075539 Ga0316576_100755392 206
340 3300032168 Ga0316593_10028276 Ga0316593_100282763 206
341 3300033524 Ga0316592_1000912 Ga0316592_10009123 206
342 3300036712 Ga0316584_0499704 Ga0316584_0499704_74_796 206
343 3300041512 Ga0451853_3828379 Ga0451853_3828379_799_1437 206
344 3300042010 Ga0439452_000040 Ga0439452_000040_75181_75819 206
345 3300044712 Ga0453684_0294140 Ga0453684_0294140_256_951 206
346 3300046458 Ga0495591_026464 Ga0495591_026464_289_927 206
347 3300046460 Ga0495638_0005546 Ga0495638_0005546_7124_7762 206
348 3300046471 Ga0495650_0000205 Ga0495650_0000205_27083_27721 206
349 3300046522 Ga0495643_0056199 Ga0495643_0056199_35_673 206
350 3300046694 Ga0495649_0002182 Ga0495649_0002182_6129_6767 206
351 3300047446 Ga0495679_002590 Ga0495679_002590_3601_4239 206
352 3300048907 Ga0496104_0000172 Ga0496104_0000172_29374_30012 206
353 3300048919 Ga0496116_0000411 Ga0496116_0000411_54764_55402 206
354 3300048920 Ga0496117_0001450 Ga0496117_0001450_18347_18985 206
355 3300048921 Ga0496118_0006246 Ga0496118_0006246_9975_10613 206
356 3300048922 Ga0496119_0007985 Ga0496119_0007985_6463_7101 206
357 3300048923 Ga0496120_0010990 Ga0496120_0010990_4643_5281 206
358 3300048924 Ga0496121_0002012 Ga0496121_0002012_26941_27579 206
359 3300048925 Ga0496122_0001840 Ga0496122_0001840_21498_22136 206
360 3300048926 Ga0496123_0001514 Ga0496123_0001514_10190_10828 206
361 3300048927 Ga0496124_0000217 Ga0496124_0000217_34416_35054 206
362 3300048927 Ga0496124_0064556 Ga0496124_0064556_886_1524 206
363 3300048929 Ga0496126_0003906 Ga0496126_0003906_1358_1996 206
364 3300048929 Ga0496126_0243146 Ga0496126_0243146_146_784 206
365 3300050491 nmdc:mga00v17_12190_c1 nmdc:mga00v17_12190_c1_4080_4718 206
366 iso_pu_bacteria 8001522603 8001523581 206

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02508

Rnf-Nqr

Rnf-Nqr subunit, membrane protein

45

231

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8acy-assembly1.cif.gz_D x-ray structure of na+-nqr from vibrio cholerae at 3.5 a resolution 0.7254 11 206
8acy-assembly1.cif.gz_D x-ray structure of na+-nqr from vibrio cholerae at 3.5 a resolution 0.6975 11 206
7zc6-assembly1.cif.gz_E na+ - translocating ferredoxin: nad+ reductase (rnf) of c. tetanomorphum 0.6766 10 199
7zc6-assembly1.cif.gz_E na+ - translocating ferredoxin: nad+ reductase (rnf) of c. tetanomorphum 0.6613 10 199
8ahx-assembly1.cif.gz_E cryo-em structure of the nitrogen-fixation associated nadh:ferredoxin oxidoreductase rnf from azotobacter vinelandii 0.6404 10 205
ID Description Score Start End Superfamily
af_P77179_4_200_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.6127 11 191 1.10.1760.20
af_P77179_4_200_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.5671 11 191 1.10.1760.20
af_P0A766_4_191_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.518 12 195 1.10.1760.20
af_A9Z1K7_120_346_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.5045 62 201 1.20.120.1770
af_P0A766_4_191_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.4953 12 195 1.10.1760.20
ID Description Score Start End GO Terms
AF-A0A2E7UPG1-F1-model_v4 NADH:ubiquinone reductase (Na(+)-transporting) subunit D 0.7763 83 206 GO:0005886
GO:0012505
AF-A0A2E7UPG1-F1-model_v4 NADH:ubiquinone reductase (Na(+)-transporting) subunit D 0.765 83 206 GO:0005886
GO:0012505
AF-A0A812IKT8-F1-model_v4 NqrA protein 0.7532 10 201 GO:0006814
GO:0010181
GO:0012505
GO:0016020
GO:0016655
GO:0055085
AF-A0A177NN93-F1-model_v4 Na(+)-translocating NADH-quinone reductase subunit D (Na(+)-NQR subunit D) (Na(+)-translocating NQR subunit D) (EC 7.2.1.1) (NQR complex subunit D) (NQR-1 subunit D) 0.7529 8 206 GO:0005886
GO:0006814
GO:0012505
GO:0016655
AF-A0A0Q2UJJ6-F1-model_v4 deleted 0.7518 10 202

Feature Viewer

pLDDT pTM Quality
62.41 0.52 Medium
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Predicted Structure (AlphaFold2)

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