F423951

General Info

Members Datasets Scaffolds Average Seq Length
366 152 732 228

Family's Representative Sequence

Representative Sequence 3300005544|Ga0070686_100098940|Ga0070686_1000989402
Length 263
Sequence MRSVYPQEHLSWFELQEYCYFRDGKGTLFTQFMDNTKKYAVIVAGGKGARMRAAVPKQFLPLNGKPLLCYPIEAFAQAMPDAQIILVLPEDQLRSAQIVLRSYIGNIEVTIVPGGQTRFHSVQNGLKEIKGHGIVFVHDGARPLLSNDLILRCYKQAIEKGSAIPAIPVAESLRIVDNKSTRAVNRDHIRIIQTPQTFNTNILLPAYQLEYNESFTDEATVVEAYGEKIHLIEGARENVKVTTPEDMLIAEAFLKARNHVPVS

Samples

Sample ID Description Type Environment
1 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
75 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
117 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
121 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
124 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
125 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
126 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
127 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
128 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
129 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
132 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
137 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
138 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
139 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
140 3300049685 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_B_3_control Metagenome Rhizosphere
141 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
142 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
143 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
144 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
145 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
146 3300049774 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_A_5_drought Metagenome Rhizosphere
147 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.73
Metatranscriptomes 0
Isolates 0.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.27
Nodule 0
Rhizoplane 0
Rhizosphere 97.81
Stem 0
Stem Tuber 0
Unclassified 10.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070686_100098940 3300005544 Unclassified 1967
2 rootH1_10143158 3300003316 Bacteria 1720
3 rootH2_10018591 3300003320 Bacteria 30571
4 rootH2_10029102 3300003320 Bacteria 1530
5 Ga0065707_10432724 3300005295 Bacteria 818
6 Ga0070658_10000018 3300005327 Bacteria 200558
7 Ga0070658_10006795 3300005327 Bacteria 9254
8 Ga0070658_10028884 3300005327 Bacteria 4452
9 Ga0070658_10050812 3300005327 Bacteria 3360
10 Ga0070658_10099855 3300005327 Bacteria 2398
11 Ga0070658_10109832 3300005327 Bacteria 2284
12 Ga0070658_10114595 3300005327 Bacteria 2235
13 Ga0070676_10000642 3300005328 Bacteria 17019
14 Ga0070683_100012066 3300005329 Bacteria 7496
15 Ga0070683_100163095 3300005329 Unclassified 2115
16 Ga0070683_100215188 3300005329 Bacteria 1826
17 Ga0070690_100229261 3300005330 Unclassified 1305
18 Ga0070670_100235115 3300005331 Unclassified 1595
19 Ga0070670_100381338 3300005331 Bacteria 1242
20 Ga0070666_10065507 3300005335 Bacteria 2465
21 Ga0070680_100001905 3300005336 Bacteria 15317
22 Ga0070680_100014097 3300005336 Bacteria 6241
23 Ga0070680_100047021 3300005336 Bacteria 3512
24 Ga0070682_100000269 3300005337 Bacteria 37385
25 Ga0070682_100023179 3300005337 Bacteria 3685
26 Ga0068868_100008511 3300005338 Bacteria 7347
27 Ga0068868_100027571 3300005338 Bacteria 4333
28 Ga0070660_100012841 3300005339 Bacteria 5990
29 Ga0070660_100031635 3300005339 Bacteria 3975
30 Ga0070660_100032610 3300005339 Bacteria 3921
31 Ga0070660_100046917 3300005339 Bacteria 3313
32 Ga0070660_100067475 3300005339 Bacteria 2787
33 Ga0070660_100240327 3300005339 Bacteria 1475
34 Ga0070675_100258563 3300005354 Bacteria 1525
35 Ga0070675_100517676 3300005354 Unclassified 1076
36 Ga0070671_100023057 3300005355 Bacteria 5088
37 Ga0070671_100829396 3300005355 Bacteria 806
38 Ga0070673_100072603 3300005364 Bacteria 2768
39 Ga0070673_100580731 3300005364 Unclassified 1021
40 Ga0070659_100011640 3300005366 Bacteria 6509
41 Ga0070659_100037364 3300005366 Bacteria 3785
42 Ga0070659_100078039 3300005366 Bacteria 2642
43 Ga0070667_100080629 3300005367 Bacteria 2784
44 Ga0070667_100572415 3300005367 Bacteria 1039
45 Ga0070714_100687983 3300005435 Bacteria 986
46 Ga0070663_100012143 3300005455 Bacteria 5437
47 Ga0070678_100235532 3300005456 Bacteria 1528
48 Ga0070678_100869716 3300005456 Bacteria 822
49 Ga0070662_100000626 3300005457 Bacteria 21383
50 Ga0070662_100012130 3300005457 Bacteria 5705
51 Ga0070681_10020174 3300005458 Bacteria 6681
52 Ga0070681_10108981 3300005458 Bacteria 2709
53 Ga0070681_10117484 3300005458 Unclassified 2596
54 Ga0070681_10142747 3300005458 Bacteria 2324
55 Ga0070681_10148103 3300005458 Bacteria 2275
56 Ga0070681_10185100 3300005458 Bacteria 2003
57 Ga0068867_100000952 3300005459 Bacteria 19720
58 Ga0068867_100129327 3300005459 Unclassified 1961
59 Ga0068867_100956774 3300005459 Bacteria 774
60 Ga0070698_100006406 3300005471 Bacteria 12770
61 Ga0070679_100000442 3300005530 Bacteria 35233
62 Ga0070679_100001105 3300005530 Bacteria 23592
63 Ga0070679_100020577 3300005530 Bacteria 6435
64 Ga0070679_100121363 3300005530 Bacteria 2598
65 Ga0070679_100201253 3300005530 Bacteria 1957
66 Ga0070684_100016650 3300005535 Bacteria 6013
67 Ga0068853_100029964 3300005539 Bacteria 4592
68 Ga0068853_100032121 3300005539 Bacteria 4445
69 Ga0068853_100044781 3300005539 Bacteria 3789
70 Ga0068853_100647473 3300005539 Bacteria 1005
71 Ga0070665_100000072 3300005548 Bacteria 198575
72 Ga0068855_100001235 3300005563 Bacteria 31705
73 Ga0068855_100014411 3300005563 Bacteria 9518
74 Ga0068855_100037071 3300005563 Bacteria 5801
75 Ga0068855_100066928 3300005563 Bacteria 4187
76 Ga0068855_100272946 3300005563 Bacteria 1880
77 Ga0068855_100299529 3300005563 Bacteria 1781
78 Ga0068855_100366089 3300005563 Bacteria 1585
79 Ga0068855_100366363 3300005563 Bacteria 1585
80 Ga0070664_100058056 3300005564 Unclassified 3291
81 Ga0070664_100476577 3300005564 Bacteria 1148
82 Ga0068857_100035876 3300005577 Bacteria 4393
83 Ga0068854_100132916 3300005578 Bacteria 1902
84 Ga0068856_100011615 3300005614 Bacteria 8543
85 Ga0068856_100013897 3300005614 Bacteria 7787
86 Ga0068856_100371857 3300005614 Bacteria 1448
87 Ga0068852_100001913 3300005616 Bacteria 14179
88 Ga0068852_100019512 3300005616 Bacteria 5368
89 Ga0068852_100056823 3300005616 Unclassified 3384
90 Ga0068852_100090237 3300005616 Bacteria 2740
91 Ga0068852_100643343 3300005616 Bacteria 1067
92 Ga0068859_100701120 3300005617 Unclassified 1103
93 Ga0068864_100305557 3300005618 Bacteria 1490
94 Ga0068864_100344836 3300005618 Bacteria 1404
95 Ga0068866_10018714 3300005718 Bacteria 3138
96 Ga0068866_10226766 3300005718 Bacteria 1131
97 Ga0068861_100061514 3300005719 Unclassified 2882
98 Ga0068851_10104755 3300005834 Bacteria 1504
99 Ga0068858_100446505 3300005842 Unclassified 1246
100 Ga0068860_100011729 3300005843 Bacteria 8637
101 Ga0068862_100019408 3300005844 Bacteria 5674
102 Ga0081539_10027853 3300005985 Bacteria 3568
103 Ga0097621_100000878 3300006237 Bacteria 21148
104 Ga0097621_100003896 3300006237 Bacteria 10343
105 Ga0097621_100007710 3300006237 Bacteria 7717
106 Ga0068871_100006906 3300006358 Bacteria 8084
107 Ga0068871_100013765 3300006358 Bacteria 6014
108 Ga0068871_100022376 3300006358 Bacteria 4871
109 Ga0075430_100110757 3300006846 Bacteria 2289
110 Ga0068865_100000127 3300006881 Bacteria 39327
111 Ga0097620_100701152 3300006931 Unclassified 1103
112 Ga0105240_10013007 3300009093 Bacteria 11459
113 Ga0105240_10057888 3300009093 Bacteria 4839
114 Ga0105240_10059080 3300009093 Bacteria 4787
115 Ga0105240_10548832 3300009093 Bacteria 1279
116 Ga0105240_10774034 3300009093 Bacteria 1042
117 Ga0105240_11244272 3300009093 Bacteria 787
118 Ga0111539_10131701 3300009094 Unclassified 2928
119 Ga0114129_10101813 3300009147 Bacteria 3973
120 Ga0105241_10014346 3300009174 Bacteria 5802
121 Ga0105241_10016950 3300009174 Bacteria 5347
122 Ga0105241_10019885 3300009174 Bacteria 4956
123 Ga0105242_10080619 3300009176 Bacteria 2720
124 Ga0105237_10007484 3300009545 Bacteria 11941
125 Ga0105237_10261534 3300009545 Bacteria 1733
126 Ga0105238_10280493 3300009551 Bacteria 1647
127 Ga0105238_10332078 3300009551 Bacteria 1507
128 Ga0105239_10026581 3300010375 Bacteria 6370
129 Ga0105239_10279197 3300010375 Bacteria 1880
130 Ga0105239_10416452 3300010375 Bacteria 1522
131 Ga0105239_10588862 3300010375 Bacteria 1268
132 Ga0105246_10206344 3300011119 Bacteria 1531
133 Ga0157373_10002582 3300013100 Bacteria 13751
134 Ga0157373_10013521 3300013100 Bacteria 5985
135 Ga0157373_10016147 3300013100 Bacteria 5450
136 Ga0157373_10029618 3300013100 Bacteria 3942
137 Ga0157373_10045851 3300013100 Bacteria 3121
138 Ga0157373_10064795 3300013100 Bacteria 2586
139 Ga0157371_10000990 3300013102 Bacteria 31409
140 Ga0157371_10003086 3300013102 Bacteria 15438
141 Ga0157371_10004222 3300013102 Bacteria 12636
142 Ga0157371_10005211 3300013102 Bacteria 11051
143 Ga0157371_10011465 3300013102 Bacteria 6823
144 Ga0157371_10024737 3300013102 Bacteria 4381
145 Ga0157371_10066197 3300013102 Bacteria 2559
146 Ga0157371_10080374 3300013102 Bacteria 2309
147 Ga0157371_10115623 3300013102 Bacteria 1905
148 Ga0157371_10133364 3300013102 Bacteria 1767
149 Ga0157370_10023347 3300013104 Bacteria 6141
150 Ga0157370_10056057 3300013104 Bacteria 3752
151 Ga0157370_10078189 3300013104 Bacteria 3115
152 Ga0157370_10087478 3300013104 Bacteria 2927
153 Ga0157370_10102335 3300013104 Bacteria 2682
154 Ga0157370_10648884 3300013104 Unclassified 965
155 Ga0157370_11035643 3300013104 Unclassified 742
156 Ga0157369_10032218 3300013105 Bacteria 5765
157 Ga0157369_10080661 3300013105 Unclassified 3484
158 Ga0157369_10092150 3300013105 Bacteria 3234
159 Ga0157369_10093841 3300013105 Bacteria 3203
160 Ga0157369_10263401 3300013105 Bacteria 1797
161 Ga0157369_10394945 3300013105 Bacteria 1435
162 Ga0157374_10009022 3300013296 Bacteria 8552
163 Ga0157374_10018185 3300013296 Bacteria 6198
164 Ga0157374_10068545 3300013296 Bacteria 3338
165 Ga0157374_10075368 3300013296 Bacteria 3188
166 Ga0157374_10309644 3300013296 Unclassified 1563
167 Ga0157374_10563337 3300013296 Bacteria 1148
168 Ga0157378_10004114 3300013297 Bacteria 12845
169 Ga0157378_10007509 3300013297 Bacteria 9521
170 Ga0157378_10012553 3300013297 Bacteria 7415
171 Ga0157378_10016248 3300013297 Bacteria 6517
172 Ga0157378_10041760 3300013297 Bacteria 4069
173 Ga0157378_10052604 3300013297 Bacteria 3623
174 Ga0157378_10515638 3300013297 Bacteria 1196
175 Ga0163162_10000010 3300013306 Bacteria 302032
176 Ga0163162_10004371 3300013306 Bacteria 13604
177 Ga0163162_10119688 3300013306 Bacteria 2736
178 Ga0163162_10121045 3300013306 Unclassified 2722
179 Ga0163162_10548674 3300013306 Bacteria 1284
180 Ga0163162_10595821 3300013306 Bacteria 1232
181 Ga0163162_10953522 3300013306 Bacteria 969
182 Ga0157372_10019545 3300013307 Bacteria 7301
183 Ga0157372_10052596 3300013307 Bacteria 4536
184 Ga0157372_10055713 3300013307 Bacteria 4416
185 Ga0157372_10059127 3300013307 Bacteria 4286
186 Ga0157372_10230869 3300013307 Bacteria 2145
187 Ga0157372_10254761 3300013307 Bacteria 2038
188 Ga0157372_10259496 3300013307 Unclassified 2018
189 Ga0157372_10283536 3300013307 Bacteria 1926
190 Ga0157372_10316150 3300013307 Bacteria 1818
191 Ga0157372_10655595 3300013307 Bacteria 1222
192 Ga0157372_10706691 3300013307 Bacteria 1173
193 Ga0157372_10909728 3300013307 Unclassified 1021
194 Ga0157375_10005903 3300013308 Bacteria 10672
195 Ga0157375_10094797 3300013308 Bacteria 3054
196 Ga0157375_10101337 3300013308 Bacteria 2962
197 Ga0157375_10116440 3300013308 Bacteria 2777
198 Ga0157375_10138578 3300013308 Bacteria 2558
199 Ga0163163_10000317 3300014325 Bacteria 47023
200 Ga0163163_10386132 3300014325 Bacteria 1458
201 Ga0163163_10441668 3300014325 Bacteria 1361
202 Ga0157380_10015422 3300014326 Bacteria 5616
203 Ga0157377_10006123 3300014745 Bacteria 5711
204 Ga0157377_10038384 3300014745 Unclassified 2643
205 Ga0157379_10135426 3300014968 Unclassified 2219
206 Ga0157376_10047843 3300014969 Unclassified 3533
207 Ga0157376_10407452 3300014969 Bacteria 1316
208 Ga0157376_10491837 3300014969 Bacteria 1204
209 Ga0213872_10006890 3300021361 Bacteria 5656
210 Ga0207656_10080238 3300025321 Bacteria 1465
211 Ga0207647_10003426 3300025904 Bacteria 11898
212 Ga0207647_10012212 3300025904 Bacteria 5986
213 Ga0207647_10012704 3300025904 Bacteria 5852
214 Ga0207645_10018663 3300025907 Bacteria 4557
215 Ga0207705_10000036 3300025909 Bacteria 200787
216 Ga0207705_10005067 3300025909 Bacteria 9877
217 Ga0207705_10066703 3300025909 Bacteria 2603
218 Ga0207705_10128613 3300025909 Bacteria 1884
219 Ga0207705_10198208 3300025909 Bacteria 1521
220 Ga0207654_10007603 3300025911 Bacteria 5463
221 Ga0207654_10015094 3300025911 Bacteria 4000
222 Ga0207707_10021755 3300025912 Bacteria 5605
223 Ga0207707_10095577 3300025912 Bacteria 2597
224 Ga0207707_10283267 3300025912 Bacteria 1435
225 Ga0207695_10004656 3300025913 Bacteria 18589
226 Ga0207695_10013122 3300025913 Bacteria 9890
227 Ga0207695_10019132 3300025913 Bacteria 7893
228 Ga0207695_10065391 3300025913 Bacteria 3739
229 Ga0207695_10346746 3300025913 Bacteria 1372
230 Ga0207671_10040826 3300025914 Bacteria 3434
231 Ga0207660_10004616 3300025917 Bacteria 8977
232 Ga0207660_10039998 3300025917 Bacteria 3280
233 Ga0207660_10083047 3300025917 Bacteria 2358
234 Ga0207660_10106592 3300025917 Bacteria 2102
235 Ga0207657_10009133 3300025919 Bacteria 10003
236 Ga0207657_10020956 3300025919 Bacteria 6166
237 Ga0207657_10116638 3300025919 Bacteria 2200
238 Ga0207657_10129248 3300025919 Bacteria 2072
239 Ga0207657_10195192 3300025919 Bacteria 1631
240 Ga0207652_10000035 3300025921 Bacteria 138263
241 Ga0207652_10000101 3300025921 Bacteria 93033
242 Ga0207652_10000584 3300025921 Bacteria 36691
243 Ga0207652_10018178 3300025921 Bacteria 5762
244 Ga0207652_10029763 3300025921 Unclassified 4569
245 Ga0207652_10052968 3300025921 Bacteria 3485
246 Ga0207650_10333831 3300025925 Bacteria 1244
247 Ga0207659_10218477 3300025926 Bacteria 1531
248 Ga0207644_10015452 3300025931 Bacteria 5124
249 Ga0207690_10010000 3300025932 Bacteria 5634
250 Ga0207690_10010813 3300025932 Bacteria 5438
251 Ga0207706_10000317 3300025933 Bacteria 52169
252 Ga0207706_10055457 3300025933 Bacteria 3495
253 Ga0207709_10307930 3300025935 Bacteria 1180
254 Ga0207704_10000044 3300025938 Bacteria 86753
255 Ga0207691_10073800 3300025940 Bacteria 3077
256 Ga0207691_10291664 3300025940 Bacteria 1403
257 Ga0207661_10020129 3300025944 Unclassified 4983
258 Ga0207661_10738156 3300025944 Bacteria 906
259 Ga0207679_10183573 3300025945 Unclassified 1733
260 Ga0207667_10009593 3300025949 Bacteria 11391
261 Ga0207667_10016000 3300025949 Bacteria 8494
262 Ga0207667_10016044 3300025949 Bacteria 8482
263 Ga0207667_10021526 3300025949 Bacteria 7144
264 Ga0207667_10167718 3300025949 Bacteria 2257
265 Ga0207667_10318969 3300025949 Bacteria 1587
266 Ga0207667_10517343 3300025949 Bacteria 1209
267 Ga0207640_10270259 3300025981 Unclassified 1329
268 Ga0207640_10581805 3300025981 Bacteria 945
269 Ga0207658_10587193 3300025986 Bacteria 1000
270 Ga0207677_10016554 3300026023 Bacteria 4371
271 Ga0207677_10081596 3300026023 Bacteria 2321
272 Ga0207639_10004531 3300026041 Bacteria 9364
273 Ga0207639_10008835 3300026041 Bacteria 6926
274 Ga0207639_10039958 3300026041 Bacteria 3499
275 Ga0207639_10093729 3300026041 Bacteria 2409
276 Ga0207639_10128579 3300026041 Bacteria 2093
277 Ga0207678_10007364 3300026067 Bacteria 9740
278 Ga0207678_10222953 3300026067 Bacteria 1614
279 Ga0207708_10425809 3300026075 Unclassified 1101
280 Ga0207702_10011450 3300026078 Bacteria 7394
281 Ga0207702_10585911 3300026078 Bacteria 1093
282 Ga0207648_10002139 3300026089 Bacteria 21480
283 Ga0207648_10373981 3300026089 Bacteria 1287
284 Ga0207676_10105111 3300026095 Bacteria 2350
285 Ga0207674_10046094 3300026116 Bacteria 4479
286 Ga0207674_10098599 3300026116 Bacteria 2905
287 Ga0207675_100007789 3300026118 Bacteria 10101
288 Ga0207698_10005251 3300026142 Bacteria 7971
289 Ga0207698_10010726 3300026142 Bacteria 5910
290 Ga0207698_10062745 3300026142 Bacteria 2904
291 Ga0207698_10573746 3300026142 Bacteria 1109
292 Ga0268266_10000089 3300028379 Bacteria 198566
293 Ga0268266_10034070 3300028379 Bacteria 4329
294 Ga0268265_10014534 3300028380 Bacteria 5365
295 Ga0268264_10178964 3300028381 Bacteria 1924
296 Ga0307517_10003551 3300028786 Bacteria 24219
297 Ga0307515_10000002 3300028794 Bacteria 1231751
298 Ga0265327_10000366 3300031251 Bacteria 85818
299 Ga0307414_10121786 3300032004 Bacteria 2007
300 Ga0307414_10192951 3300032004 Unclassified 1650
301 Ga0307510_10006636 3300033180 Bacteria 13804
302 Ga0395899_0001109 3300037312 Bacteria 24123
303 Ga0395899_0010779 3300037312 Bacteria 7005
304 Ga0395899_0018971 3300037312 Bacteria 5226
305 Ga0395899_0028441 3300037312 Bacteria 4209
306 Ga0395900_0000277 3300037418 Bacteria 77256
307 Ga0395900_0001234 3300037418 Bacteria 31453
308 Ga0395900_0003575 3300037418 Bacteria 16707
309 Ga0395900_0015431 3300037418 Bacteria 7787
310 Ga0395900_0019640 3300037418 Bacteria 6889
311 Ga0395900_0037329 3300037418 Bacteria 5010
312 Ga0395900_0052483 3300037418 Bacteria 4197
313 Ga0395900_0075844 3300037418 Bacteria 3456
314 Ga0395900_0157802 3300037418 Bacteria 2316
315 Ga0395900_0229334 3300037418 Bacteria 1868
316 Ga0395900_0610336 3300037418 Bacteria 1031
317 Ga0395898_0002043 3300037466 Bacteria 25263
318 Ga0395898_0007992 3300037466 Bacteria 11222
319 Ga0395898_0009131 3300037466 Bacteria 10446
320 Ga0395898_0034007 3300037466 Bacteria 5084
321 Ga0395898_0066291 3300037466 Bacteria 3498
322 Ga0395905_0000068 3300037471 Bacteria 177163
323 Ga0395905_0004443 3300037471 Bacteria 14577
324 Ga0395905_0005634 3300037471 Bacteria 12740
325 Ga0395905_0186677 3300037471 Unclassified 1946
326 Ga0395905_0256314 3300037471 Bacteria 1634
327 Ga0395901_0000136 3300038443 Bacteria 95382
328 Ga0395901_0004549 3300038443 Bacteria 13997
329 Ga0395901_0006991 3300038443 Bacteria 11406
330 Ga0436365_0140747 3300039437 Bacteria 24514
331 Ga0436361_0742208 3300039447 Bacteria 6052
332 Ga0439441_002763 3300042001 Bacteria 2507
333 Ga0451577_0085471 3300042876 Bacteria 2815
334 Ga0451577_0379048 3300042876 Unclassified 1283
335 Ga0466972_0000002 3300044658 Bacteria 408005
336 Ga0453684_0085350 3300044712 Unclassified 3923
337 Ga0453684_0187984 3300044712 Unclassified 2418
338 Ga0466970_0000332 3300044765 Bacteria 23060
339 Ga0466960_0048425 3300044901 Unclassified 2043
340 Ga0466959_0231787 3300045049 Bacteria 1278
341 Ga0495583_0066350 3300046506 Bacteria 1597
342 Ga0495631_0005611 3300046518 Bacteria 6553
343 Ga0495687_016125 3300047443 Bacteria 3768
344 Ga0501034_0000410 3300049571 Bacteria 72148
345 Ga0501034_0022006 3300049571 Bacteria 6495
346 Ga0501034_0442690 3300049571 Bacteria 1218
347 Ga0501043_0126185 3300049579 Bacteria 2007
348 Ga0501207_002938 3300049654 Bacteria 2230
349 Ga0501217_000404 3300049661 Bacteria 6973
350 Ga0501235_001166 3300049669 Bacteria 5523
351 Ga0501243_003615 3300049675 Bacteria 2302
352 Ga0501256_009890 3300049685 Bacteria 905
353 Ga0501261_023094 3300049690 Bacteria 903
354 Ga0501221_000198 3300049704 Bacteria 8496
355 Ga0501225_0022563 3300049705 Bacteria 1737
356 Ga0501234_000817 3300049707 Bacteria 4880
357 Ga0501245_005979 3300049708 Bacteria 1694
358 Ga0501278_003080 3300049774 Bacteria 1175
359 Ga0501279_019573 3300049775 Bacteria 959
360 Ga0501035_0020137 3300049822 Bacteria 6127
361 Ga0501044_0102658 3300049823 Unclassified 2875
362 Ga0501044_0695285 3300049823 Unclassified 903
363 nmdc:mga08y16_1449275_c1 3300050511 Unclassified 648
364 nmdc:mga08y16_273525_c1 3300050511 Bacteria 1743
365 Ga0500616_0001236 3300053153 Bacteria 25651
366 2881957570 2881955468 Bacteria 3545609
367 Ga0070686_100098940
368 rootH1_10143158
369 rootH2_10018591
370 rootH2_10029102
371 Ga0065707_10432724
372 Ga0070658_10000018
373 Ga0070658_10006795
374 Ga0070658_10028884
375 Ga0070658_10050812
376 Ga0070658_10099855
377 Ga0070658_10109832
378 Ga0070658_10114595
379 Ga0070676_10000642
380 Ga0070683_100012066
381 Ga0070683_100163095
382 Ga0070683_100215188
383 Ga0070690_100229261
384 Ga0070670_100235115
385 Ga0070670_100381338
386 Ga0070666_10065507
387 Ga0070680_100001905
388 Ga0070680_100014097
389 Ga0070680_100047021
390 Ga0070682_100000269
391 Ga0070682_100023179
392 Ga0068868_100008511
393 Ga0068868_100027571
394 Ga0070660_100012841
395 Ga0070660_100031635
396 Ga0070660_100032610
397 Ga0070660_100046917
398 Ga0070660_100067475
399 Ga0070660_100240327
400 Ga0070675_100258563
401 Ga0070675_100517676
402 Ga0070671_100023057
403 Ga0070671_100829396
404 Ga0070673_100072603
405 Ga0070673_100580731
406 Ga0070659_100011640
407 Ga0070659_100037364
408 Ga0070659_100078039
409 Ga0070667_100080629
410 Ga0070667_100572415
411 Ga0070714_100687983
412 Ga0070663_100012143
413 Ga0070678_100235532
414 Ga0070678_100869716
415 Ga0070662_100000626
416 Ga0070662_100012130
417 Ga0070681_10020174
418 Ga0070681_10108981
419 Ga0070681_10117484
420 Ga0070681_10142747
421 Ga0070681_10148103
422 Ga0070681_10185100
423 Ga0068867_100000952
424 Ga0068867_100129327
425 Ga0068867_100956774
426 Ga0070698_100006406
427 Ga0070679_100000442
428 Ga0070679_100001105
429 Ga0070679_100020577
430 Ga0070679_100121363
431 Ga0070679_100201253
432 Ga0070684_100016650
433 Ga0068853_100029964
434 Ga0068853_100032121
435 Ga0068853_100044781
436 Ga0068853_100647473
437 Ga0070665_100000072
438 Ga0068855_100001235
439 Ga0068855_100014411
440 Ga0068855_100037071
441 Ga0068855_100066928
442 Ga0068855_100272946
443 Ga0068855_100299529
444 Ga0068855_100366089
445 Ga0068855_100366363
446 Ga0070664_100058056
447 Ga0070664_100476577
448 Ga0068857_100035876
449 Ga0068854_100132916
450 Ga0068856_100011615
451 Ga0068856_100013897
452 Ga0068856_100371857
453 Ga0068852_100001913
454 Ga0068852_100019512
455 Ga0068852_100056823
456 Ga0068852_100090237
457 Ga0068852_100643343
458 Ga0068859_100701120
459 Ga0068864_100305557
460 Ga0068864_100344836
461 Ga0068866_10018714
462 Ga0068866_10226766
463 Ga0068861_100061514
464 Ga0068851_10104755
465 Ga0068858_100446505
466 Ga0068860_100011729
467 Ga0068862_100019408
468 Ga0081539_10027853
469 Ga0097621_100000878
470 Ga0097621_100003896
471 Ga0097621_100007710
472 Ga0068871_100006906
473 Ga0068871_100013765
474 Ga0068871_100022376
475 Ga0075430_100110757
476 Ga0068865_100000127
477 Ga0097620_100701152
478 Ga0105240_10013007
479 Ga0105240_10057888
480 Ga0105240_10059080
481 Ga0105240_10548832
482 Ga0105240_10774034
483 Ga0105240_11244272
484 Ga0111539_10131701
485 Ga0114129_10101813
486 Ga0105241_10014346
487 Ga0105241_10016950
488 Ga0105241_10019885
489 Ga0105242_10080619
490 Ga0105237_10007484
491 Ga0105237_10261534
492 Ga0105238_10280493
493 Ga0105238_10332078
494 Ga0105239_10026581
495 Ga0105239_10279197
496 Ga0105239_10416452
497 Ga0105239_10588862
498 Ga0105246_10206344
499 Ga0157373_10002582
500 Ga0157373_10013521
501 Ga0157373_10016147
502 Ga0157373_10029618
503 Ga0157373_10045851
504 Ga0157373_10064795
505 Ga0157371_10000990
506 Ga0157371_10003086
507 Ga0157371_10004222
508 Ga0157371_10005211
509 Ga0157371_10011465
510 Ga0157371_10024737
511 Ga0157371_10066197
512 Ga0157371_10080374
513 Ga0157371_10115623
514 Ga0157371_10133364
515 Ga0157370_10023347
516 Ga0157370_10056057
517 Ga0157370_10078189
518 Ga0157370_10087478
519 Ga0157370_10102335
520 Ga0157370_10648884
521 Ga0157370_11035643
522 Ga0157369_10032218
523 Ga0157369_10080661
524 Ga0157369_10092150
525 Ga0157369_10093841
526 Ga0157369_10263401
527 Ga0157369_10394945
528 Ga0157374_10009022
529 Ga0157374_10018185
530 Ga0157374_10068545
531 Ga0157374_10075368
532 Ga0157374_10309644
533 Ga0157374_10563337
534 Ga0157378_10004114
535 Ga0157378_10007509
536 Ga0157378_10012553
537 Ga0157378_10016248
538 Ga0157378_10041760
539 Ga0157378_10052604
540 Ga0157378_10515638
541 Ga0163162_10000010
542 Ga0163162_10004371
543 Ga0163162_10119688
544 Ga0163162_10121045
545 Ga0163162_10548674
546 Ga0163162_10595821
547 Ga0163162_10953522
548 Ga0157372_10019545
549 Ga0157372_10052596
550 Ga0157372_10055713
551 Ga0157372_10059127
552 Ga0157372_10230869
553 Ga0157372_10254761
554 Ga0157372_10259496
555 Ga0157372_10283536
556 Ga0157372_10316150
557 Ga0157372_10655595
558 Ga0157372_10706691
559 Ga0157372_10909728
560 Ga0157375_10005903
561 Ga0157375_10094797
562 Ga0157375_10101337
563 Ga0157375_10116440
564 Ga0157375_10138578
565 Ga0163163_10000317
566 Ga0163163_10386132
567 Ga0163163_10441668
568 Ga0157380_10015422
569 Ga0157377_10006123
570 Ga0157377_10038384
571 Ga0157379_10135426
572 Ga0157376_10047843
573 Ga0157376_10407452
574 Ga0157376_10491837
575 Ga0213872_10006890
576 Ga0207656_10080238
577 Ga0207647_10003426
578 Ga0207647_10012212
579 Ga0207647_10012704
580 Ga0207645_10018663
581 Ga0207705_10000036
582 Ga0207705_10005067
583 Ga0207705_10066703
584 Ga0207705_10128613
585 Ga0207705_10198208
586 Ga0207654_10007603
587 Ga0207654_10015094
588 Ga0207707_10021755
589 Ga0207707_10095577
590 Ga0207707_10283267
591 Ga0207695_10004656
592 Ga0207695_10013122
593 Ga0207695_10019132
594 Ga0207695_10065391
595 Ga0207695_10346746
596 Ga0207671_10040826
597 Ga0207660_10004616
598 Ga0207660_10039998
599 Ga0207660_10083047
600 Ga0207660_10106592
601 Ga0207657_10009133
602 Ga0207657_10020956
603 Ga0207657_10116638
604 Ga0207657_10129248
605 Ga0207657_10195192
606 Ga0207652_10000035
607 Ga0207652_10000101
608 Ga0207652_10000584
609 Ga0207652_10018178
610 Ga0207652_10029763
611 Ga0207652_10052968
612 Ga0207650_10333831
613 Ga0207659_10218477
614 Ga0207644_10015452
615 Ga0207690_10010000
616 Ga0207690_10010813
617 Ga0207706_10000317
618 Ga0207706_10055457
619 Ga0207709_10307930
620 Ga0207704_10000044
621 Ga0207691_10073800
622 Ga0207691_10291664
623 Ga0207661_10020129
624 Ga0207661_10738156
625 Ga0207679_10183573
626 Ga0207667_10009593
627 Ga0207667_10016000
628 Ga0207667_10016044
629 Ga0207667_10021526
630 Ga0207667_10167718
631 Ga0207667_10318969
632 Ga0207667_10517343
633 Ga0207640_10270259
634 Ga0207640_10581805
635 Ga0207658_10587193
636 Ga0207677_10016554
637 Ga0207677_10081596
638 Ga0207639_10004531
639 Ga0207639_10008835
640 Ga0207639_10039958
641 Ga0207639_10093729
642 Ga0207639_10128579
643 Ga0207678_10007364
644 Ga0207678_10222953
645 Ga0207708_10425809
646 Ga0207702_10011450
647 Ga0207702_10585911
648 Ga0207648_10002139
649 Ga0207648_10373981
650 Ga0207676_10105111
651 Ga0207674_10046094
652 Ga0207674_10098599
653 Ga0207675_100007789
654 Ga0207698_10005251
655 Ga0207698_10010726
656 Ga0207698_10062745
657 Ga0207698_10573746
658 Ga0268266_10000089
659 Ga0268266_10034070
660 Ga0268265_10014534
661 Ga0268264_10178964
662 Ga0307517_10003551
663 Ga0307515_10000002
664 Ga0265327_10000366
665 Ga0307414_10121786
666 Ga0307414_10192951
667 Ga0307510_10006636
668 Ga0395899_0001109
669 Ga0395899_0010779
670 Ga0395899_0018971
671 Ga0395899_0028441
672 Ga0395900_0000277
673 Ga0395900_0001234
674 Ga0395900_0003575
675 Ga0395900_0015431
676 Ga0395900_0019640
677 Ga0395900_0037329
678 Ga0395900_0052483
679 Ga0395900_0075844
680 Ga0395900_0157802
681 Ga0395900_0229334
682 Ga0395900_0610336
683 Ga0395898_0002043
684 Ga0395898_0007992
685 Ga0395898_0009131
686 Ga0395898_0034007
687 Ga0395898_0066291
688 Ga0395905_0000068
689 Ga0395905_0004443
690 Ga0395905_0005634
691 Ga0395905_0186677
692 Ga0395905_0256314
693 Ga0395901_0000136
694 Ga0395901_0004549
695 Ga0395901_0006991
696 Ga0436365_0140747
697 Ga0436361_0742208
698 Ga0439441_002763
699 Ga0451577_0085471
700 Ga0451577_0379048
701 Ga0466972_0000002
702 Ga0453684_0085350
703 Ga0453684_0187984
704 Ga0466970_0000332
705 Ga0466960_0048425
706 Ga0466959_0231787
707 Ga0495583_0066350
708 Ga0495631_0005611
709 Ga0495687_016125
710 Ga0501034_0000410
711 Ga0501034_0022006
712 Ga0501034_0442690
713 Ga0501043_0126185
714 Ga0501207_002938
715 Ga0501217_000404
716 Ga0501235_001166
717 Ga0501243_003615
718 Ga0501256_009890
719 Ga0501261_023094
720 Ga0501221_000198
721 Ga0501225_0022563
722 Ga0501234_000817
723 Ga0501245_005979
724 Ga0501278_003080
725 Ga0501279_019573
726 Ga0501035_0020137
727 Ga0501044_0102658
728 Ga0501044_0695285
729 nmdc:mga08y16_1449275_c1
730 nmdc:mga08y16_273525_c1
731 Ga0500616_0001236
732 2881957570

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01128

IspD

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

39

256

0.94

PF12804

NTP_transf_3

MobA-like NTP transferase domain

40

202

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3okr-assembly2.cif.gz_C structure of mtb apo 2-c-methyl-d-erythritol 4-phosphate cytidyltransferase (ispd) 0.9205 17 236
5hs2-assembly1.cif.gz_A crystal structure of ispd complexed with ctp and mg2+ from bacillus subtilis at 1.90 angstroms resolution 0.9202 17 235
6xhs-assembly1.cif.gz_A crystal structure of s. aureus tari in complex with ctp (space group p1211) 0.9202 17 235
3q80-assembly1.cif.gz_B structure of mtb 2-c-methyl-d-erythritol 4-phosphate cytidyltransferase (ispd) complexed with cdp-me 0.912 17 236
7kmw-assembly3.cif.gz_C crystal structure of ispd from mycobacterium paratuberculosis 0.9115 17 236
ID Description Score Start End Superfamily
1vpaB00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9057 17 235 3.90.550.10
af_A0JPF9_66_301_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9032 17 235 3.90.550.10
1w57A01 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8942 17 228 3.90.550.10
af_B4FP01_68_298_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8906 14 235 3.90.550.10
5ddvA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8894 17 236 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A3G8X0D7-F1-model_v4 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT) 0.9944 17 236 GO:0019288
GO:0050518
AF-A0A4R0MU61-F1-model_v4 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT) 0.9875 17 234 GO:0019288
GO:0050518
AF-A0A3D4TW28-F1-model_v4 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT) 0.9848 17 234 GO:0019288
GO:0050518
AF-A0A841ES89-F1-model_v4 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT) 0.9846 17 235 GO:0019288
GO:0050518
AF-C9KSZ0-F1-model_v4 deleted 0.9843 17 233

Map