F422132

General Info

Members Datasets Scaffolds Average Seq Length
361 187 722 268

Family's Representative Sequence

Representative Sequence 3300005457|Ga0070662_100003654|Ga0070662_1000036544
Length 314
Sequence MARNAMTPAKGALGGNPYLNASPSDGPPGRPASLHLAFTRGLAIGPAMLRSIARANGAAVLIPVAAALLLSGCATLGGKKKGDTAYVARDVETLYTEAKERLDNGEYKLAAALFDEVERQHPYSEWARRAQVMGAFSNYMDKNYDKAIESAQRFLSIHPGNKDAPYAYYLIALCYYEQIADVDRDQKITQQALDALTEIQRRYPQTEYAADARLKVDLVNDHLAGKEMQIGRYYERAGRWLAAQIRFQNVIDKYQTTSHTPEALYRLTETNLALGIPAEAKKYAAVLGTNYPGSEWYQKAYTLFEKKEPQLAAS

Samples

Sample ID Description Type Environment
1 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
43 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
94 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
106 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
107 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
114 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
115 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
116 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
117 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
118 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
119 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
120 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
121 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
122 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
123 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
126 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
127 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
128 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
129 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
130 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
131 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
132 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
144 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
145 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
146 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
150 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
151 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
152 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
153 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
159 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
165 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
166 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
167 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
168 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
169 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
172 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
173 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
174 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
175 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
176 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
177 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
178 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
179 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
180 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
181 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
182 2896184354 Aurantiacibacter suaedae GH3-15 Isolate Rhizosphere
183 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
184 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
185 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
186 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
187 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.84
Metatranscriptomes 0
Isolates 4.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.05
Nodule 0
Rhizoplane 3.32
Rhizosphere 88.09
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070662_100003654 3300005457 Bacteria 9606
2 SwRhRL2b_contig_1005460 2162886007 Bacteria 4100
3 JGI24740J21852_10059077 3300001979 Bacteria 1064
4 Ga0065704_10071236 3300005289 Bacteria 12329
5 Ga0065712_10119094 3300005290 Bacteria 1697
6 Ga0070658_10000876 3300005327 Bacteria 25753
7 Ga0070658_10003960 3300005327 Bacteria 12140
8 Ga0070658_10017247 3300005327 Bacteria 5778
9 Ga0070683_100083058 3300005329 Bacteria 3000
10 Ga0070680_100014289 3300005336 Bacteria 6201
11 Ga0070680_100374964 3300005336 Bacteria 1211
12 Ga0070682_100040644 3300005337 Bacteria 2862
13 Ga0070660_100000487 3300005339 Bacteria 26540
14 Ga0070660_100004715 3300005339 Bacteria 9437
15 Ga0070660_100007792 3300005339 Bacteria 7468
16 Ga0070660_100055250 3300005339 Bacteria 3068
17 Ga0070660_100087803 3300005339 Bacteria 2448
18 Ga0070660_100109385 3300005339 Bacteria 2197
19 Ga0070661_100000783 3300005344 Bacteria 22884
20 Ga0070692_10001041 3300005345 Bacteria 9580
21 Ga0070692_10007218 3300005345 Bacteria 4883
22 Ga0070692_10086831 3300005345 Bacteria 1694
23 Ga0070669_100000453 3300005353 Bacteria 31221
24 Ga0070659_100003053 3300005366 Bacteria 11903
25 Ga0070659_100031138 3300005366 Bacteria 4131
26 Ga0070659_100115448 3300005366 Bacteria 2170
27 Ga0070663_100079762 3300005455 Bacteria 2403
28 Ga0070663_100121493 3300005455 Bacteria 1973
29 Ga0070678_100081766 3300005456 Bacteria 2450
30 Ga0070662_100003676 3300005457 Bacteria 9588
31 Ga0070662_100044806 3300005457 Bacteria 3171
32 Ga0070662_100067255 3300005457 Bacteria 2631
33 Ga0070679_100007688 3300005530 Bacteria 10092
34 Ga0070679_100034969 3300005530 Bacteria 4983
35 Ga0070679_100053127 3300005530 Bacteria 4033
36 Ga0070679_100095257 3300005530 Bacteria 2965
37 Ga0070679_100267288 3300005530 Bacteria 1665
38 Ga0070679_100366546 3300005530 Bacteria 1388
39 Ga0070684_100022619 3300005535 Bacteria 5246
40 Ga0070695_100008438 3300005545 Bacteria 6114
41 Ga0070696_100004732 3300005546 Bacteria 9096
42 Ga0070693_100061783 3300005547 Bacteria 2179
43 Ga0070665_100004892 3300005548 Bacteria 13902
44 Ga0070665_100006731 3300005548 Bacteria 11683
45 Ga0070704_100551603 3300005549 Bacteria 1007
46 Ga0068855_100011592 3300005563 Bacteria 10649
47 Ga0068855_100233505 3300005563 Bacteria 2058
48 Ga0070664_100028021 3300005564 Bacteria 4685
49 Ga0070664_100045471 3300005564 Bacteria 3708
50 Ga0070664_100079278 3300005564 Bacteria 2826
51 Ga0068857_100093803 3300005577 Bacteria 2687
52 Ga0068857_100414582 3300005577 Bacteria 1255
53 Ga0068854_100009036 3300005578 Bacteria 6420
54 Ga0068859_100238521 3300005617 Bacteria 1907
55 Ga0068864_100014181 3300005618 Bacteria 6615
56 Ga0068861_100038286 3300005719 Bacteria 3570
57 Ga0068851_10042237 3300005834 Bacteria 2295
58 Ga0068863_100000052 3300005841 Bacteria 125430
59 Ga0068858_100007332 3300005842 Bacteria 10673
60 Ga0068860_100000007 3300005843 Bacteria 429329
61 Ga0068860_100030912 3300005843 Bacteria 5149
62 Ga0068860_100041709 3300005843 Bacteria 4384
63 Ga0068862_100005670 3300005844 Bacteria 10423
64 Ga0068862_100803532 3300005844 Bacteria 919
65 Ga0081539_10013024 3300005985 Bacteria 6313
66 Ga0075364_10318968 3300006051 Bacteria 1058
67 Ga0075370_10016465 3300006353 Bacteria 3977
68 Ga0068871_100183300 3300006358 Bacteria 1800
69 Ga0075428_100191667 3300006844 Bacteria 2211
70 Ga0097620_100238540 3300006931 Bacteria 1907
71 Ga0105251_10034720 3300009011 Bacteria 2493
72 Ga0105250_10012848 3300009092 Bacteria 3449
73 Ga0111539_10052066 3300009094 Bacteria 4874
74 Ga0114129_10102887 3300009147 Bacteria 3950
75 Ga0105243_10005701 3300009148 Bacteria 9685
76 Ga0105241_10157887 3300009174 Bacteria 1862
77 Ga0105246_10000726 3300011119 Bacteria 18694
78 Ga0157373_10005507 3300013100 Bacteria 9494
79 Ga0157371_10005729 3300013102 Bacteria 10412
80 Ga0157371_10062548 3300013102 Bacteria 2638
81 Ga0157371_10161306 3300013102 Bacteria 1601
82 Ga0157371_10169247 3300013102 Bacteria 1561
83 Ga0157370_10064979 3300013104 Bacteria 3453
84 Ga0157370_10134016 3300013104 Bacteria 2310
85 Ga0157370_10320720 3300013104 Bacteria 1429
86 Ga0157369_10009165 3300013105 Bacteria 11322
87 Ga0157369_10159743 3300013105 Bacteria 2379
88 Ga0157374_10462859 3300013296 Bacteria 1270
89 Ga0163162_10025836 3300013306 Bacteria 5805
90 Ga0157372_10008363 3300013307 Bacteria 11002
91 Ga0157372_10186722 3300013307 Bacteria 2400
92 Ga0157372_10325183 3300013307 Bacteria 1790
93 Ga0163163_10906113 3300014325 Bacteria 945
94 Ga0157380_10087757 3300014326 Bacteria 2558
95 Ga0207696_1009882 3300025711 Bacteria 3533
96 Ga0207713_1009998 3300025735 Bacteria 5295
97 Ga0207647_10037281 3300025904 Bacteria 3083
98 Ga0207705_10000749 3300025909 Bacteria 26722
99 Ga0207705_10002469 3300025909 Bacteria 14250
100 Ga0207705_10014052 3300025909 Bacteria 5769
101 Ga0207705_10032377 3300025909 Bacteria 3736
102 Ga0207654_10171634 3300025911 Bacteria 1409
103 Ga0207707_10100957 3300025912 Bacteria 2521
104 Ga0207660_10139491 3300025917 Bacteria 1852
105 Ga0207657_10000431 3300025919 Bacteria 44557
106 Ga0207657_10000538 3300025919 Bacteria 40382
107 Ga0207657_10002665 3300025919 Bacteria 19265
108 Ga0207657_10073224 3300025919 Bacteria 2896
109 Ga0207657_10073388 3300025919 Bacteria 2891
110 Ga0207657_10134280 3300025919 Bacteria 2026
111 Ga0207649_10053675 3300025920 Bacteria 2506
112 Ga0207652_10002493 3300025921 Bacteria 15495
113 Ga0207652_10054733 3300025921 Bacteria 3431
114 Ga0207652_10085273 3300025921 Bacteria 2768
115 Ga0207652_10216390 3300025921 Bacteria 1726
116 Ga0207681_10001327 3300025923 Bacteria 15971
117 Ga0207681_10161877 3300025923 Bacteria 1688
118 Ga0207681_10390026 3300025923 Bacteria 1123
119 Ga0207650_10170579 3300025925 Bacteria 1729
120 Ga0207690_10003178 3300025932 Bacteria 9865
121 Ga0207690_10007179 3300025932 Bacteria 6619
122 Ga0207690_10082419 3300025932 Bacteria 2250
123 Ga0207690_10225235 3300025932 Bacteria 1437
124 Ga0207706_10006997 3300025933 Bacteria 10424
125 Ga0207706_10093238 3300025933 Bacteria 2648
126 Ga0207691_10163119 3300025940 Bacteria 1954
127 Ga0207661_10040548 3300025944 Bacteria 3661
128 Ga0207661_10059674 3300025944 Bacteria 3075
129 Ga0207679_10018851 3300025945 Bacteria 4630
130 Ga0207679_10028984 3300025945 Bacteria 3850
131 Ga0207667_10003524 3300025949 Bacteria 19346
132 Ga0207667_10035795 3300025949 Bacteria 5325
133 Ga0207667_10131764 3300025949 Bacteria 2575
134 Ga0207640_10076297 3300025981 Bacteria 2274
135 Ga0207658_10001552 3300025986 Bacteria 17804
136 Ga0207658_10009434 3300025986 Bacteria 6618
137 Ga0207703_10006231 3300026035 Bacteria 9548
138 Ga0207639_10004442 3300026041 Bacteria 9463
139 Ga0207678_10067077 3300026067 Bacteria 3080
140 Ga0207678_10232977 3300026067 Bacteria 1577
141 Ga0207678_10254501 3300026067 Bacteria 1504
142 Ga0207702_10472690 3300026078 Bacteria 1219
143 Ga0207641_10000042 3300026088 Bacteria 186384
144 Ga0207648_10633699 3300026089 Bacteria 987
145 Ga0207676_10007005 3300026095 Bacteria 7989
146 Ga0207674_10044047 3300026116 Bacteria 4599
147 Ga0207674_10092673 3300026116 Bacteria 3011
148 Ga0207675_100071846 3300026118 Bacteria 3235
149 Ga0207683_10164471 3300026121 Bacteria 2007
150 Ga0207698_10782403 3300026142 Bacteria 955
151 Ga0209974_10017887 3300027876 Bacteria 2350
152 Ga0268266_10007091 3300028379 Bacteria 10178
153 Ga0268266_10166132 3300028379 Bacteria 1999
154 Ga0268265_10010057 3300028380 Bacteria 6387
155 Ga0268265_10041298 3300028380 Bacteria 3412
156 Ga0268265_10045392 3300028380 Bacteria 3279
157 Ga0268264_10000134 3300028381 Bacteria 179475
158 Ga0268264_10022143 3300028381 Bacteria 5187
159 Ga0268264_10072341 3300028381 Bacteria 2924
160 Ga0268264_10078248 3300028381 Bacteria 2819
161 Ga0316177_1131549 3300030731 Bacteria 1071
162 Ga0316182_1429277 3300030745 Bacteria 2759
163 Ga0307408_100042587 3300031548 Bacteria 3226
164 Ga0307408_100066220 3300031548 Bacteria 2653
165 Ga0307408_100091256 3300031548 Bacteria 2300
166 Ga0307408_100163708 3300031548 Bacteria 1769
167 Ga0307408_100411728 3300031548 Bacteria 1163
168 Ga0307405_10000331 3300031731 Bacteria 17554
169 Ga0307405_10008728 3300031731 Bacteria 5153
170 Ga0307405_10009832 3300031731 Bacteria 4921
171 Ga0307405_10087737 3300031731 Bacteria 2051
172 Ga0307405_10106165 3300031731 Bacteria 1893
173 Ga0307405_10172919 3300031731 Bacteria 1542
174 Ga0307405_10184439 3300031731 Bacteria 1501
175 Ga0307405_10188715 3300031731 Bacteria 1487
176 Ga0307405_10221086 3300031731 Bacteria 1389
177 Ga0307405_10226811 3300031731 Bacteria 1374
178 Ga0307413_10002100 3300031824 Bacteria 7986
179 Ga0307413_10055517 3300031824 Bacteria 2410
180 Ga0307413_10080163 3300031824 Bacteria 2089
181 Ga0307413_10150453 3300031824 Bacteria 1621
182 Ga0307413_10158926 3300031824 Bacteria 1585
183 Ga0307413_10318262 3300031824 Bacteria 1187
184 Ga0307413_10651312 3300031824 Bacteria 869
185 Ga0307410_10006730 3300031852 Bacteria 6230
186 Ga0307410_10018864 3300031852 Bacteria 4179
187 Ga0307410_10027329 3300031852 Bacteria 3605
188 Ga0307410_10043021 3300031852 Bacteria 2989
189 Ga0307410_10052098 3300031852 Bacteria 2762
190 Ga0307410_10071794 3300031852 Bacteria 2402
191 Ga0307410_10075844 3300031852 Bacteria 2345
192 Ga0307410_10090590 3300031852 Bacteria 2169
193 Ga0307410_10253137 3300031852 Bacteria 1370
194 Ga0307410_10368529 3300031852 Bacteria 1152
195 Ga0307406_10054849 3300031901 Bacteria 2545
196 Ga0307406_10100721 3300031901 Bacteria 1967
197 Ga0307406_10113243 3300031901 Bacteria 1872
198 Ga0307406_10189197 3300031901 Bacteria 1505
199 Ga0307406_10198527 3300031901 Bacteria 1474
200 Ga0307406_10223635 3300031901 Bacteria 1401
201 Ga0307406_10317824 3300031901 Bacteria 1203
202 Ga0307406_10411329 3300031901 Bacteria 1075
203 Ga0307406_10450509 3300031901 Bacteria 1032
204 Ga0307406_10666704 3300031901 Bacteria 865
205 Ga0307407_10002981 3300031903 Bacteria 6796
206 Ga0307407_10033090 3300031903 Bacteria 2817
207 Ga0307407_10068662 3300031903 Bacteria 2100
208 Ga0307407_10199091 3300031903 Bacteria 1341
209 Ga0307412_10017417 3300031911 Bacteria 4300
210 Ga0307412_10037432 3300031911 Bacteria 3117
211 Ga0307412_10040434 3300031911 Bacteria 3017
212 Ga0307412_10052258 3300031911 Bacteria 2705
213 Ga0307412_10056843 3300031911 Bacteria 2609
214 Ga0307412_10059850 3300031911 Bacteria 2554
215 Ga0307412_10114811 3300031911 Bacteria 1929
216 Ga0307412_10137516 3300031911 Bacteria 1784
217 Ga0307412_10168249 3300031911 Bacteria 1636
218 Ga0307409_100016590 3300031995 Bacteria 4878
219 Ga0307409_100024184 3300031995 Bacteria 4230
220 Ga0307409_100041305 3300031995 Bacteria 3443
221 Ga0307409_100073837 3300031995 Bacteria 2722
222 Ga0307409_100077750 3300031995 Bacteria 2667
223 Ga0307409_100082452 3300031995 Bacteria 2603
224 Ga0307409_100128925 3300031995 Bacteria 2157
225 Ga0307409_100132450 3300031995 Bacteria 2133
226 Ga0307409_100141457 3300031995 Bacteria 2074
227 Ga0307409_100227665 3300031995 Bacteria 1687
228 Ga0307409_100511560 3300031995 Bacteria 1171
229 Ga0307409_100579426 3300031995 Bacteria 1106
230 Ga0307416_100002549 3300032002 Bacteria 10500
231 Ga0307416_100067892 3300032002 Bacteria 2943
232 Ga0307416_100088722 3300032002 Bacteria 2645
233 Ga0307416_100132381 3300032002 Bacteria 2248
234 Ga0307416_100433054 3300032002 Bacteria 1363
235 Ga0307414_10004451 3300032004 Bacteria 7608
236 Ga0307414_10009766 3300032004 Bacteria 5528
237 Ga0307414_10032572 3300032004 Bacteria 3434
238 Ga0307414_10039828 3300032004 Bacteria 3169
239 Ga0307414_10042794 3300032004 Bacteria 3080
240 Ga0307414_10045524 3300032004 Bacteria 3005
241 Ga0307414_10051101 3300032004 Bacteria 2867
242 Ga0307414_10062946 3300032004 Bacteria 2635
243 Ga0307414_10065044 3300032004 Bacteria 2600
244 Ga0307414_10080462 3300032004 Bacteria 2382
245 Ga0307414_10154676 3300032004 Bacteria 1813
246 Ga0307414_10175864 3300032004 Bacteria 1716
247 Ga0307414_10234180 3300032004 Bacteria 1516
248 Ga0307414_10402353 3300032004 Bacteria 1189
249 Ga0307414_10418141 3300032004 Bacteria 1168
250 Ga0307414_10642992 3300032004 Bacteria 955
251 Ga0307411_10002478 3300032005 Bacteria 8186
252 Ga0307411_10006436 3300032005 Bacteria 5876
253 Ga0307411_10014845 3300032005 Bacteria 4351
254 Ga0307411_10016103 3300032005 Bacteria 4225
255 Ga0307411_10027000 3300032005 Bacteria 3466
256 Ga0307411_10049941 3300032005 Bacteria 2721
257 Ga0307411_10061728 3300032005 Bacteria 2496
258 Ga0307411_10085372 3300032005 Bacteria 2186
259 Ga0307411_10107241 3300032005 Bacteria 1990
260 Ga0307415_100001735 3300032126 Bacteria 10618
261 Ga0307415_100004251 3300032126 Bacteria 7404
262 Ga0307415_100012559 3300032126 Bacteria 4901
263 Ga0307415_100081552 3300032126 Bacteria 2311
264 Ga0307415_100115614 3300032126 Bacteria 2000
265 Ga0307415_100123011 3300032126 Bacteria 1949
266 Ga0307415_100130685 3300032126 Bacteria 1900
267 Ga0307415_100220128 3300032126 Bacteria 1521
268 Ga0307415_100364268 3300032126 Bacteria 1222
269 Ga0316582_0021239 3300036647 Bacteria 3831
270 Ga0395899_0032155 3300037312 Bacteria 3941
271 Ga0395900_0000547 3300037418 Bacteria 52367
272 Ga0395900_0044360 3300037418 Bacteria 4581
273 Ga0395900_0114422 3300037418 Bacteria 2768
274 Ga0395898_0013986 3300037466 Bacteria 8246
275 Ga0395905_0103136 3300037471 Bacteria 2678
276 Ga0395905_0116706 3300037471 Bacteria 2509
277 Ga0395901_0000390 3300038443 Bacteria 52341
278 Ga0395901_0079741 3300038443 Bacteria 3418
279 Ga0395901_0259578 3300038443 Bacteria 1808
280 Ga0439436_0088520 3300041404 Bacteria 862
281 Ga0439439_0081837 3300041406 Bacteria 874
282 Ga0439461_0054974 3300041410 Bacteria 891
283 Ga0451853_1676640 3300041512 Bacteria 3292
284 Ga0439449_0014386 3300042007 Bacteria 2975
285 Ga0439452_040109 3300042010 Bacteria 1106
286 Ga0439462_0004426 3300042015 Bacteria 3427
287 Ga0450890_001068 3300042127 Bacteria 3986
288 Ga0450889_000007 3300042144 Bacteria 18930
289 Ga0439446_0054833 3300042156 Bacteria 1196
290 Ga0450893_0034752 3300042532 Bacteria 908
291 Ga0451577_0434558 3300042876 Bacteria 1192
292 Ga0453684_0399288 3300044712 Bacteria 1540
293 Ga0466970_0198672 3300044765 Bacteria 1115
294 Ga0495663_0000961 3300046525 Bacteria 9587
295 Ga0495663_0096211 3300046525 Bacteria 970
296 Ga0495598_0000897 3300046537 Bacteria 5748
297 Ga0495598_0003582 3300046537 Bacteria 3312
298 Ga0495598_0046847 3300046537 Bacteria 1286
299 Ga0495621_0000164 3300046539 Bacteria 14838
300 Ga0495621_0006899 3300046539 Bacteria 3340
301 Ga0495659_0055462 3300046664 Bacteria 1452
302 Ga0495661_0035633 3300046665 Bacteria 3120
303 Ga0495669_0001692 3300046684 Bacteria 9027
304 Ga0495669_0034463 3300046684 Bacteria 2232
305 Ga0495670_0013093 3300046691 Bacteria 4079
306 Ga0495677_0001815 3300047445 Bacteria 8537
307 Ga0495686_0006116 3300047472 Bacteria 9323
308 Ga0496100_0017622 3300048903 Bacteria 4220
309 Ga0496102_0007752 3300048905 Bacteria 9173
310 Ga0496103_0000038 3300048906 Bacteria 178822
311 Ga0496104_0000123 3300048907 Bacteria 71754
312 Ga0496104_0009063 3300048907 Bacteria 8847
313 Ga0496105_0001537 3300048908 Bacteria 16330
314 Ga0496107_0024584 3300048910 Bacteria 4262
315 Ga0496109_0175567 3300048912 Bacteria 2011
316 Ga0496111_0154400 3300048914 Bacteria 1703
317 Ga0496113_0000362 3300048916 Bacteria 21784
318 Ga0496114_0013505 3300048917 Bacteria 6550
319 Ga0496115_0074253 3300048918 Bacteria 2761
320 Ga0496117_0000296 3300048920 Bacteria 88277
321 Ga0496118_0028147 3300048921 Bacteria 4740
322 Ga0496119_0003506 3300048922 Bacteria 16215
323 Ga0496120_0029219 3300048923 Bacteria 3367
324 Ga0496121_0013411 3300048924 Bacteria 8810
325 Ga0496122_0001569 3300048925 Bacteria 36021
326 Ga0496123_0018202 3300048926 Bacteria 5602
327 Ga0496124_0007294 3300048927 Bacteria 11792
328 Ga0496125_0006508 3300048928 Bacteria 12602
329 Ga0496126_0000066 3300048929 Bacteria 252188
330 Ga0501047_0206381 3300049581 Bacteria 1824
331 Ga0501202_038061 3300049652 Bacteria 1030
332 Ga0501243_010982 3300049675 Bacteria 1417
333 Ga0501035_0394196 3300049822 Bacteria 1153
334 Ga0501044_0198933 3300049823 Bacteria 1963
335 Ga0501044_0386467 3300049823 Bacteria 1314
336 nmdc:mga05p37_425410_c1 3300050507 Bacteria 1544
337 nmdc:mga08y16_50811_c1 3300050511 Bacteria 4338
338 Ga0500643_000001 3300053087 Bacteria 1440111
339 Ga0500641_0081973 3300053096 Bacteria 1370
340 Ga0500608_000252 3300053122 Bacteria 20975
341 Ga0500559_0061266 3300053136 Bacteria 1678
342 Ga0500564_011972 3300053138 Bacteria 3842
343 Ga0500568_0128809 3300053139 Bacteria 941
344 Ga0500616_0002460 3300053153 Bacteria 15363
345 Ga0500567_003337 3300053723 Bacteria 7122
346 Ga0500625_000010 3300053729 Bacteria 154401
347 2643949048 2643221588 Bacteria 3692460
348 2738711699 2738541275 Bacteria 4830863
349 2738850124 2738541301 Bacteria 4834102
350 2738865853 2738541304 Bacteria 4833665
351 2739298371 2738543022 Bacteria 4835059
352 2739360049 2738543033 Bacteria 4833336
353 2848297235 2848297114 Bacteria 3608511
354 2882808314 2882806704 Bacteria 3007728
355 2895882622 2895880812 Bacteria 11255272
356 2896185058 2896184354 Bacteria 3258548
357 2896255441 2896253425 Bacteria 3418029
358 2919141696 2919138771 Bacteria 5281312
359 2928101648 2928100450 Bacteria 4837635
360 2928959739 2928959182 Bacteria 4725774
361 3000865789 3000865235 Bacteria 3106258
362 Ga0070662_100003654
363 SwRhRL2b_contig_1005460
364 JGI24740J21852_10059077
365 Ga0065704_10071236
366 Ga0065712_10119094
367 Ga0070658_10000876
368 Ga0070658_10003960
369 Ga0070658_10017247
370 Ga0070683_100083058
371 Ga0070680_100014289
372 Ga0070680_100374964
373 Ga0070682_100040644
374 Ga0070660_100000487
375 Ga0070660_100004715
376 Ga0070660_100007792
377 Ga0070660_100055250
378 Ga0070660_100087803
379 Ga0070660_100109385
380 Ga0070661_100000783
381 Ga0070692_10001041
382 Ga0070692_10007218
383 Ga0070692_10086831
384 Ga0070669_100000453
385 Ga0070659_100003053
386 Ga0070659_100031138
387 Ga0070659_100115448
388 Ga0070663_100079762
389 Ga0070663_100121493
390 Ga0070678_100081766
391 Ga0070662_100003676
392 Ga0070662_100044806
393 Ga0070662_100067255
394 Ga0070679_100007688
395 Ga0070679_100034969
396 Ga0070679_100053127
397 Ga0070679_100095257
398 Ga0070679_100267288
399 Ga0070679_100366546
400 Ga0070684_100022619
401 Ga0070695_100008438
402 Ga0070696_100004732
403 Ga0070693_100061783
404 Ga0070665_100004892
405 Ga0070665_100006731
406 Ga0070704_100551603
407 Ga0068855_100011592
408 Ga0068855_100233505
409 Ga0070664_100028021
410 Ga0070664_100045471
411 Ga0070664_100079278
412 Ga0068857_100093803
413 Ga0068857_100414582
414 Ga0068854_100009036
415 Ga0068859_100238521
416 Ga0068864_100014181
417 Ga0068861_100038286
418 Ga0068851_10042237
419 Ga0068863_100000052
420 Ga0068858_100007332
421 Ga0068860_100000007
422 Ga0068860_100030912
423 Ga0068860_100041709
424 Ga0068862_100005670
425 Ga0068862_100803532
426 Ga0081539_10013024
427 Ga0075364_10318968
428 Ga0075370_10016465
429 Ga0068871_100183300
430 Ga0075428_100191667
431 Ga0097620_100238540
432 Ga0105251_10034720
433 Ga0105250_10012848
434 Ga0111539_10052066
435 Ga0114129_10102887
436 Ga0105243_10005701
437 Ga0105241_10157887
438 Ga0105246_10000726
439 Ga0157373_10005507
440 Ga0157371_10005729
441 Ga0157371_10062548
442 Ga0157371_10161306
443 Ga0157371_10169247
444 Ga0157370_10064979
445 Ga0157370_10134016
446 Ga0157370_10320720
447 Ga0157369_10009165
448 Ga0157369_10159743
449 Ga0157374_10462859
450 Ga0163162_10025836
451 Ga0157372_10008363
452 Ga0157372_10186722
453 Ga0157372_10325183
454 Ga0163163_10906113
455 Ga0157380_10087757
456 Ga0207696_1009882
457 Ga0207713_1009998
458 Ga0207647_10037281
459 Ga0207705_10000749
460 Ga0207705_10002469
461 Ga0207705_10014052
462 Ga0207705_10032377
463 Ga0207654_10171634
464 Ga0207707_10100957
465 Ga0207660_10139491
466 Ga0207657_10000431
467 Ga0207657_10000538
468 Ga0207657_10002665
469 Ga0207657_10073224
470 Ga0207657_10073388
471 Ga0207657_10134280
472 Ga0207649_10053675
473 Ga0207652_10002493
474 Ga0207652_10054733
475 Ga0207652_10085273
476 Ga0207652_10216390
477 Ga0207681_10001327
478 Ga0207681_10161877
479 Ga0207681_10390026
480 Ga0207650_10170579
481 Ga0207690_10003178
482 Ga0207690_10007179
483 Ga0207690_10082419
484 Ga0207690_10225235
485 Ga0207706_10006997
486 Ga0207706_10093238
487 Ga0207691_10163119
488 Ga0207661_10040548
489 Ga0207661_10059674
490 Ga0207679_10018851
491 Ga0207679_10028984
492 Ga0207667_10003524
493 Ga0207667_10035795
494 Ga0207667_10131764
495 Ga0207640_10076297
496 Ga0207658_10001552
497 Ga0207658_10009434
498 Ga0207703_10006231
499 Ga0207639_10004442
500 Ga0207678_10067077
501 Ga0207678_10232977
502 Ga0207678_10254501
503 Ga0207702_10472690
504 Ga0207641_10000042
505 Ga0207648_10633699
506 Ga0207676_10007005
507 Ga0207674_10044047
508 Ga0207674_10092673
509 Ga0207675_100071846
510 Ga0207683_10164471
511 Ga0207698_10782403
512 Ga0209974_10017887
513 Ga0268266_10007091
514 Ga0268266_10166132
515 Ga0268265_10010057
516 Ga0268265_10041298
517 Ga0268265_10045392
518 Ga0268264_10000134
519 Ga0268264_10022143
520 Ga0268264_10072341
521 Ga0268264_10078248
522 Ga0316177_1131549
523 Ga0316182_1429277
524 Ga0307408_100042587
525 Ga0307408_100066220
526 Ga0307408_100091256
527 Ga0307408_100163708
528 Ga0307408_100411728
529 Ga0307405_10000331
530 Ga0307405_10008728
531 Ga0307405_10009832
532 Ga0307405_10087737
533 Ga0307405_10106165
534 Ga0307405_10172919
535 Ga0307405_10184439
536 Ga0307405_10188715
537 Ga0307405_10221086
538 Ga0307405_10226811
539 Ga0307413_10002100
540 Ga0307413_10055517
541 Ga0307413_10080163
542 Ga0307413_10150453
543 Ga0307413_10158926
544 Ga0307413_10318262
545 Ga0307413_10651312
546 Ga0307410_10006730
547 Ga0307410_10018864
548 Ga0307410_10027329
549 Ga0307410_10043021
550 Ga0307410_10052098
551 Ga0307410_10071794
552 Ga0307410_10075844
553 Ga0307410_10090590
554 Ga0307410_10253137
555 Ga0307410_10368529
556 Ga0307406_10054849
557 Ga0307406_10100721
558 Ga0307406_10113243
559 Ga0307406_10189197
560 Ga0307406_10198527
561 Ga0307406_10223635
562 Ga0307406_10317824
563 Ga0307406_10411329
564 Ga0307406_10450509
565 Ga0307406_10666704
566 Ga0307407_10002981
567 Ga0307407_10033090
568 Ga0307407_10068662
569 Ga0307407_10199091
570 Ga0307412_10017417
571 Ga0307412_10037432
572 Ga0307412_10040434
573 Ga0307412_10052258
574 Ga0307412_10056843
575 Ga0307412_10059850
576 Ga0307412_10114811
577 Ga0307412_10137516
578 Ga0307412_10168249
579 Ga0307409_100016590
580 Ga0307409_100024184
581 Ga0307409_100041305
582 Ga0307409_100073837
583 Ga0307409_100077750
584 Ga0307409_100082452
585 Ga0307409_100128925
586 Ga0307409_100132450
587 Ga0307409_100141457
588 Ga0307409_100227665
589 Ga0307409_100511560
590 Ga0307409_100579426
591 Ga0307416_100002549
592 Ga0307416_100067892
593 Ga0307416_100088722
594 Ga0307416_100132381
595 Ga0307416_100433054
596 Ga0307414_10004451
597 Ga0307414_10009766
598 Ga0307414_10032572
599 Ga0307414_10039828
600 Ga0307414_10042794
601 Ga0307414_10045524
602 Ga0307414_10051101
603 Ga0307414_10062946
604 Ga0307414_10065044
605 Ga0307414_10080462
606 Ga0307414_10154676
607 Ga0307414_10175864
608 Ga0307414_10234180
609 Ga0307414_10402353
610 Ga0307414_10418141
611 Ga0307414_10642992
612 Ga0307411_10002478
613 Ga0307411_10006436
614 Ga0307411_10014845
615 Ga0307411_10016103
616 Ga0307411_10027000
617 Ga0307411_10049941
618 Ga0307411_10061728
619 Ga0307411_10085372
620 Ga0307411_10107241
621 Ga0307415_100001735
622 Ga0307415_100004251
623 Ga0307415_100012559
624 Ga0307415_100081552
625 Ga0307415_100115614
626 Ga0307415_100123011
627 Ga0307415_100130685
628 Ga0307415_100220128
629 Ga0307415_100364268
630 Ga0316582_0021239
631 Ga0395899_0032155
632 Ga0395900_0000547
633 Ga0395900_0044360
634 Ga0395900_0114422
635 Ga0395898_0013986
636 Ga0395905_0103136
637 Ga0395905_0116706
638 Ga0395901_0000390
639 Ga0395901_0079741
640 Ga0395901_0259578
641 Ga0439436_0088520
642 Ga0439439_0081837
643 Ga0439461_0054974
644 Ga0451853_1676640
645 Ga0439449_0014386
646 Ga0439452_040109
647 Ga0439462_0004426
648 Ga0450890_001068
649 Ga0450889_000007
650 Ga0439446_0054833
651 Ga0450893_0034752
652 Ga0451577_0434558
653 Ga0453684_0399288
654 Ga0466970_0198672
655 Ga0495663_0000961
656 Ga0495663_0096211
657 Ga0495598_0000897
658 Ga0495598_0003582
659 Ga0495598_0046847
660 Ga0495621_0000164
661 Ga0495621_0006899
662 Ga0495659_0055462
663 Ga0495661_0035633
664 Ga0495669_0001692
665 Ga0495669_0034463
666 Ga0495670_0013093
667 Ga0495677_0001815
668 Ga0495686_0006116
669 Ga0496100_0017622
670 Ga0496102_0007752
671 Ga0496103_0000038
672 Ga0496104_0000123
673 Ga0496104_0009063
674 Ga0496105_0001537
675 Ga0496107_0024584
676 Ga0496109_0175567
677 Ga0496111_0154400
678 Ga0496113_0000362
679 Ga0496114_0013505
680 Ga0496115_0074253
681 Ga0496117_0000296
682 Ga0496118_0028147
683 Ga0496119_0003506
684 Ga0496120_0029219
685 Ga0496121_0013411
686 Ga0496122_0001569
687 Ga0496123_0018202
688 Ga0496124_0007294
689 Ga0496125_0006508
690 Ga0496126_0000066
691 Ga0501047_0206381
692 Ga0501202_038061
693 Ga0501243_010982
694 Ga0501035_0394196
695 Ga0501044_0198933
696 Ga0501044_0386467
697 nmdc:mga05p37_425410_c1
698 nmdc:mga08y16_50811_c1
699 Ga0500643_000001
700 Ga0500641_0081973
701 Ga0500608_000252
702 Ga0500559_0061266
703 Ga0500564_011972
704 Ga0500568_0128809
705 Ga0500616_0002460
706 Ga0500567_003337
707 Ga0500625_000010
708 2643949048
709 2738711699
710 2738850124
711 2738865853
712 2739298371
713 2739360049
714 2848297235
715 2882808314
716 2895882622
717 2896185058
718 2896255441
719 2919141696
720 2928101648
721 2928959739
722 3000865789

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13174

TPR_6

Tetratricopeptide repeat

262

294

0.98

PF13174

TPR_6

Tetratricopeptide repeat

166

206

0.97

PF13525

YfiO

Outer membrane lipoprotein

87

287

0.97

PF13432

TPR_16

Tetratricopeptide repeat

95

162

0.94

PF13432

TPR_16

Tetratricopeptide repeat

228

295

0.92

PF13512

TPR_18

Tetratricopeptide repeat

86

216

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lys-assembly1.cif.gz_D structure of the bam complex 0.9355 45 244
7tt1-assembly1.cif.gz_D bamabcde bound to substrate espp class 4 0.9271 45 245
7r1w-assembly1.cif.gz_D e. coli bam complex (bamabcde) bound to dynobactin a 0.9266 40 245
4cgq-assembly1.cif.gz_A full length tah1 bound to hsp90 peptide srmeevd 0.9205 46 111
6lyr-assembly1.cif.gz_D structure of the bam complex 0.9128 40 244
ID Description Score Start End Superfamily
2xevB00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.928 48 174 1.25.40.10
5ekqD00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9162 40 246 1.25.40.10
2xevA00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.907 49 174 1.25.40.10
2xevB00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8859 48 174 1.25.40.10
af_Q86TZ1_175_262_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8847 45 136 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A530H5R7-F1-model_v4 Outer membrane protein assembly factor BamD 0.9869 45 263 GO:0009279
AF-A0A0F3MTZ8-F1-model_v4 Outer membrane protein assembly factor BamD 0.985 57 259 GO:0009279
GO:0043165
GO:0051205
AF-A0A257JB72-F1-model_v4 Outer membrane protein assembly factor BamD 0.9849 58 238 GO:0009279
AF-A0A2N3DCJ6-F1-model_v4 Outer membrane protein assembly factor BamD 0.9847 86 263 GO:0009279
AF-A0A3S1H8Z5-F1-model_v4 Outer membrane protein assembly factor BamD 0.9834 50 263 GO:0009279

Map