F422052

General Info

Members Datasets Scaffolds Average Seq Length
360 241 313 388

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857479173|2857479930
Length 432
Sequence HHTTRSVSRPAVRGFTTTAVHAGQEPDPLTGAVVPPIYQTSTFVQDGINVLRAGHEYSRGSNPTRNGFETQLAALEHGDRAFAFASGLAAEDALLRAVLRPGDHIVLGGDGYGGTHRLITTVLEPWGVSNTPVDITDPTAVAAAVRPGRTALLWVETPSNPLLGIADLAAWAQIAHDAGALLVVDNTFASPYLQRPLDLGADVVVHSTTKYIGGHSDVLGGAVVVADREFRGRALAEAVAYQQFAAGAVAGPQDSYLAARGLKTLGLRMDRHGANAAALAGWLQGRPEVAQVFYPGLPDHPGHALAARQMDGFGGIVSIRLAGGEAAARAFAEATELFALSVSLGGVESLLCYSSEMTHASVRGTPLAVPTDLVRLSVGIEDVADLQADLEAGLECAARVAAGRGAPSSSAVPRPAPAHHRTTHARTPERTR

Samples

Sample ID Description Type Environment
1 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
2 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
3 2643221572 Leifsonia sp. Root60 Isolate Unclassified
4 2643221616 Leifsonia sp. Root227 Isolate Unclassified
5 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
6 2643221649 Leifsonia sp. Root4 Isolate Unclassified
7 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
8 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
9 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
10 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
11 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
12 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
13 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
14 2808606372 Agromyces sp. 23-23 Isolate Unclassified
15 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
16 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
17 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
18 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
19 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
20 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
21 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
22 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
23 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
24 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
25 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
26 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
27 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
28 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
29 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
30 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
31 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
32 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
33 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
34 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
35 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
36 2920879853 Kocuria salina CV6 Isolate Unclassified
37 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
38 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
39 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
40 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
41 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
42 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
43 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
44 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
45 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
46 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
47 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
48 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
49 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
50 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
51 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
52 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
53 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
54 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
55 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
56 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
57 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
58 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
59 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
60 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
61 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
62 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
63 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
64 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
65 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
66 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
67 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
68 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
69 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
70 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
71 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
72 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
73 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
74 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
75 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
76 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
77 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
78 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
79 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
80 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
81 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
82 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
83 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
84 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
85 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
86 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
87 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
88 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
89 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
90 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
91 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
92 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
93 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
94 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
100 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
103 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
104 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
119 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
120 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
121 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
122 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
123 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
124 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
125 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
126 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
127 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
128 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
129 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
130 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
131 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
132 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
133 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
134 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
135 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
136 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
137 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
138 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
139 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
140 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
141 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
142 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
143 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
144 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
145 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
146 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
147 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
148 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
149 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
150 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
151 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
152 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
153 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
154 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
155 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
156 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
157 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
158 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
159 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
160 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
161 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
162 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
163 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
164 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
165 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
166 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
167 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
168 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
169 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
170 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
171 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
172 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
173 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
174 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
175 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
176 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
177 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
178 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
179 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
180 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
181 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
182 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
183 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
184 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
185 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
186 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
187 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
188 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
189 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
190 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
191 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
192 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
193 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
194 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
195 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
196 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
197 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
200 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
201 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
202 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
205 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
206 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
207 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
208 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
209 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
210 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
211 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
212 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
213 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
214 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
215 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
216 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
217 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
218 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
219 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
220 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
221 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
222 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
223 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
224 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
225 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
226 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
227 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
228 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
229 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
230 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
231 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
232 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
233 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
234 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
235 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
236 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
237 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
238 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
239 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
240 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
241 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.11
Metatranscriptomes 0.83
Isolates 13.06

Biome Distribution

Category Percentage (%)
Aerial Root 0.28
Bulb 0
Endosphere 7.78
Nodule 0
Rhizoplane 10
Rhizosphere 73.33
Stem 0
Stem Tuber 0.28
Unclassified 8.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1000209 3300002772 Bacteria 49837
2 JGI25165J46597_1000125 3300003214 Bacteria 131155
3 JGI25165J46597_1001412 3300003214 Bacteria 13006
4 Ga0055539_1000135 3300003752 Bacteria 77054
5 Ga0055533_1000002 3300003756 Bacteria 1196393
6 Ga0055525_1000303 3300003759 Bacteria 40809
7 Ga0055527_1000003 3300003760 Bacteria 705001
8 Ga0055542_1000005 3300003762 Bacteria 550280
9 Ga0055529_1000006 3300003763 Bacteria 416978
10 Ga0055541_1003270 3300003841 Bacteria 3073
11 Ga0065714_10067715 3300005288 Bacteria 5242
12 Ga0070658_10000257 3300005327 Bacteria 46745
13 Ga0070658_10089296 3300005327 Bacteria 2538
14 Ga0070683_100123140 3300005329 Bacteria 2450
15 Ga0068869_100228946 3300005334 Bacteria 1476
16 Ga0070689_100143391 3300005340 Bacteria 1922
17 Ga0070675_100178937 3300005354 Bacteria 1833
18 Ga0070659_100056490 3300005366 Bacteria 3095
19 Ga0070708_100000866 3300005445 Bacteria 22856
20 Ga0070708_100002014 3300005445 Bacteria 15646
21 Ga0070708_100015439 3300005445 Bacteria 6309
22 Ga0070708_100098367 3300005445 Bacteria 2675
23 Ga0070662_100014384 3300005457 Bacteria 5286
24 Ga0070707_100271827 3300005468 Bacteria 1648
25 Ga0070699_100007453 3300005518 Bacteria 9521
26 Ga0070697_100045736 3300005536 Bacteria 3548
27 Ga0070696_100011811 3300005546 Bacteria 5854
28 Ga0070704_100174108 3300005549 Bacteria 1715
29 Ga0068855_100050754 3300005563 Bacteria 4887
30 Ga0068859_100093987 3300005617 Unclassified 3050
31 Ga0068864_100034504 3300005618 Bacteria 4304
32 Ga0068862_100262157 3300005844 Bacteria 1578
33 Ga0075428_100093071 3300006844 Bacteria 3286
34 Ga0075431_100007340 3300006847 Bacteria 10980
35 Ga0075433_10004894 3300006852 Bacteria 10480
36 Ga0075433_10079509 3300006852 Bacteria 2889
37 Ga0075434_100000281 3300006871 Bacteria 36197
38 Ga0075434_100023663 3300006871 Bacteria 5991
39 Ga0075434_100051556 3300006871 Bacteria 4090
40 Ga0075429_100012633 3300006880 Bacteria 7323
41 Ga0075429_100037924 3300006880 Bacteria 4195
42 Ga0075436_100074792 3300006914 Bacteria 2345
43 Ga0097620_100093988 3300006931 Unclassified 3050
44 Ga0075435_100025294 3300007076 Bacteria 4620
45 Ga0114129_10000510 3300009147 Bacteria 47495
46 Ga0114129_10377193 3300009147 Bacteria 1874
47 Ga0105238_10316264 3300009551 Bacteria 1547
48 Ga0105239_10017524 3300010375 Bacteria 7921
49 Ga0157371_10005337 3300013102 Bacteria 10871
50 Ga0157370_10264844 3300013104 Bacteria 1588
51 Ga0157369_10000225 3300013105 Bacteria 78054
52 Ga0157369_10074908 3300013105 Bacteria 3630
53 Ga0157369_10118795 3300013105 Bacteria 2806
54 Ga0157372_10138525 3300013307 Bacteria 2803
55 Ga0157380_10023943 3300014326 Bacteria 4614
56 Ga0157379_10085262 3300014968 Bacteria 2831
57 Ga0206354_10082925 3300020081 Bacteria 11638
58 Ga0206353_10047484 3300020082 Bacteria 7503
59 Ga0209566_100032 3300025225 Bacteria 338313
60 Ga0209674_100001 3300025226 Bacteria 4013750
61 Ga0209672_100003 3300025228 Bacteria 1560476
62 Ga0209147_101421 3300025229 Bacteria 8731
63 Ga0209563_100001 3300025230 Bacteria 4013775
64 Ga0207427_100039 3300025231 Bacteria 291576
65 Ga0209677_100001 3300025253 Bacteria 4013787
66 Ga0209677_101506 3300025253 Bacteria 9987
67 Ga0209148_1000004 3300025254 Bacteria 1844481
68 Ga0209759_1007917 3300025256 Bacteria 3364
69 Ga0209233_1000014 3300025261 Bacteria 996641
70 Ga0209455_1000046 3300025272 Bacteria 382681
71 Ga0209051_1018006 3300025303 Bacteria 3141
72 Ga0207647_10040432 3300025904 Bacteria 2936
73 Ga0207647_10042402 3300025904 Bacteria 2856
74 Ga0207705_10000001 3300025909 Bacteria 2061880
75 Ga0207684_10085690 3300025910 Bacteria 2683
76 Ga0207671_10092637 3300025914 Unclassified 2278
77 Ga0207646_10297534 3300025922 Bacteria 1458
78 Ga0207646_10313493 3300025922 Bacteria 1417
79 Ga0207690_10004731 3300025932 Bacteria 8041
80 Ga0207706_10161164 3300025933 Unclassified 1972
81 Ga0207667_10065925 3300025949 Bacteria 3776
82 Ga0207678_10041659 3300026067 Bacteria 3981
83 Ga0207676_10018453 3300026095 Bacteria 5071
84 Ga0207675_100069919 3300026118 Bacteria 3281
85 Ga0268265_10201816 3300028380 Bacteria 1726
86 Ga0265326_10005697 3300028558 Bacteria 3918
87 Ga0265319_1044204 3300028563 Unclassified 1494
88 Ga0265331_10019735 3300031250 Bacteria 3475
89 Ga0307408_100008509 3300031548 Bacteria 6776
90 Ga0307408_100015268 3300031548 Bacteria 5114
91 Ga0307514_10009243 3300031649 Bacteria 8308
92 Ga0316575_10012903 3300031665 Bacteria 3116
93 Ga0316576_10010648 3300031727 Bacteria 5988
94 Ga0316578_10013598 3300031728 Bacteria 4321
95 Ga0307405_10072627 3300031731 Bacteria 2218
96 Ga0307405_10172924 3300031731 Bacteria 1542
97 Ga0316577_10003606 3300031733 Bacteria 7851
98 Ga0316577_10075516 3300031733 Bacteria 1881
99 Ga0307413_10007497 3300031824 Bacteria 5073
100 Ga0307413_10008339 3300031824 Bacteria 4886
101 Ga0307413_10021563 3300031824 Bacteria 3453
102 Ga0307413_10035178 3300031824 Bacteria 2870
103 Ga0307410_10003652 3300031852 Bacteria 7768
104 Ga0307410_10021662 3300031852 Bacteria 3956
105 Ga0307406_10033183 3300031901 Bacteria 3158
106 Ga0307407_10038435 3300031903 Bacteria 2653
107 Ga0307407_10061925 3300031903 Bacteria 2189
108 Ga0307412_10008570 3300031911 Bacteria 5843
109 Ga0307412_10020005 3300031911 Bacteria 4066
110 Ga0307412_10022222 3300031911 Bacteria 3886
111 Ga0307409_100028315 3300031995 Bacteria 3989
112 Ga0307409_100051605 3300031995 Bacteria 3148
113 Ga0307409_100090717 3300031995 Bacteria 2502
114 Ga0307409_100137241 3300031995 Bacteria 2101
115 Ga0307416_100004072 3300032002 Bacteria 8739
116 Ga0307416_100006492 3300032002 Bacteria 7329
117 Ga0307416_100017386 3300032002 Bacteria 5031
118 Ga0307416_100108872 3300032002 Bacteria 2435
119 Ga0307414_10004514 3300032004 Bacteria 7568
120 Ga0307414_10044304 3300032004 Bacteria 3037
121 Ga0307414_10100706 3300032004 Bacteria 2174
122 Ga0307414_10219032 3300032004 Bacteria 1561
123 Ga0307414_10250522 3300032004 Bacteria 1472
124 Ga0307411_10012513 3300032005 Bacteria 4635
125 Ga0307411_10013560 3300032005 Bacteria 4501
126 Ga0307411_10019849 3300032005 Bacteria 3893
127 Ga0307415_100010496 3300032126 Bacteria 5250
128 Ga0307415_100166865 3300032126 Bacteria 1713
129 Ga0373930_0013702 3300034816 Bacteria 1499
130 Ga0373940_0026517 3300035088 Bacteria 1516
131 Ga0316574_0095993 3300035398 Bacteria 1894
132 Ga0316574_0111823 3300035398 Bacteria 1751
133 Ga0373931_0026535 3300035691 Bacteria 2949
134 Ga0373931_0068769 3300035691 Bacteria 1928
135 Ga0316582_0013067 3300036647 Bacteria 4660
136 Ga0316584_0000667 3300036712 Bacteria 18825
137 Ga0395899_0005605 3300037312 Bacteria 9740
138 Ga0395899_0009534 3300037312 Bacteria 7452
139 Ga0395899_0069107 3300037312 Bacteria 2588
140 Ga0395900_0015828 3300037418 Bacteria 7687
141 Ga0395900_0087138 3300037418 Bacteria 3209
142 Ga0395900_0131020 3300037418 Bacteria 2570
143 Ga0395898_0000611 3300037466 Bacteria 65932
144 Ga0395898_0013888 3300037466 Bacteria 8276
145 Ga0395898_0021880 3300037466 Bacteria 6478
146 Ga0395898_0203554 3300037466 Bacteria 1889
147 Ga0395898_0297627 3300037466 Bacteria 1539
148 Ga0395905_0051515 3300037471 Bacteria 3856
149 Ga0395905_0056541 3300037471 Bacteria 3670
150 Ga0395901_0008746 3300038443 Bacteria 10239
151 Ga0395901_0023396 3300038443 Bacteria 6333
152 Ga0395901_0040272 3300038443 Bacteria 4839
153 Ga0395901_0083523 3300038443 Bacteria 3338
154 Ga0242420_000786 3300038996 Bacteria 3861
155 Ga0439439_0000278 3300041406 Bacteria 8104
156 Ga0451793_1097870 3300041452 Bacteria 2819
157 Ga0466972_0006515 3300044658 Bacteria 5865
158 Ga0453683_0023050 3300044673 Bacteria 3968
159 Ga0466966_0084967 3300044684 Bacteria 1967
160 Ga0453684_0568448 3300044712 Bacteria 1247
161 Ga0466968_0014128 3300044735 Bacteria 3152
162 Ga0466970_0015468 3300044765 Bacteria 3923
163 Ga0466970_0038666 3300044765 Bacteria 2531
164 Ga0466970_0046610 3300044765 Bacteria 2309
165 Ga0466970_0069574 3300044765 Bacteria 1892
166 Ga0466970_0174583 3300044765 Bacteria 1191
167 Ga0466959_0002118 3300045049 Bacteria 12558
168 Ga0451576_0080806 3300045051 Bacteria 3381
169 Ga0466958_0029418 3300045836 Bacteria 3260
170 Ga0495580_0020865 3300046472 Bacteria 4841
171 Ga0495580_0055818 3300046472 Bacteria 2782
172 Ga0495639_0040536 3300046475 Bacteria 2095
173 Ga0495594_0011112 3300046499 Bacteria 4676
174 Ga0495594_0076318 3300046499 Bacteria 1869
175 Ga0495618_0005155 3300046514 Bacteria 7985
176 Ga0495630_0023508 3300046517 Bacteria 4556
177 Ga0495666_0000448 3300046526 Bacteria 18360
178 Ga0495665_0037633 3300046531 Bacteria 2582
179 Ga0495640_0002105 3300046533 Bacteria 15878
180 Ga0495586_0003227 3300046535 Bacteria 8757
181 Ga0495586_0113320 3300046535 Bacteria 1510
182 Ga0495622_0039954 3300046557 Bacteria 2184
183 Ga0495634_0001867 3300046642 Bacteria 18126
184 Ga0495647_0016088 3300046681 Bacteria 2630
185 Ga0495658_0000883 3300046683 Bacteria 16094
186 Ga0495674_0008579 3300047319 Bacteria 9728
187 Ga0495680_0005987 3300047322 Bacteria 11372
188 Ga0496100_0182014 3300048903 Bacteria 1520
189 Ga0496101_0063542 3300048904 Bacteria 2687
190 Ga0496101_0080525 3300048904 Bacteria 2406
191 Ga0496102_0013420 3300048905 Bacteria 7095
192 Ga0496102_0032949 3300048905 Bacteria 4656
193 Ga0496102_0046412 3300048905 Bacteria 3946
194 Ga0496103_0003800 3300048906 Bacteria 9188
195 Ga0496104_0039460 3300048907 Bacteria 4421
196 Ga0496105_0028574 3300048908 Bacteria 4560
197 Ga0496105_0061547 3300048908 Bacteria 3098
198 Ga0496105_0171713 3300048908 Bacteria 1777
199 Ga0496106_0062683 3300048909 Bacteria 2824
200 Ga0496107_0234535 3300048910 Bacteria 1365
201 Ga0496108_0000243 3300048911 Bacteria 48725
202 Ga0496108_0008036 3300048911 Bacteria 8563
203 Ga0496108_0020025 3300048911 Bacteria 5497
204 Ga0496109_0000477 3300048912 Bacteria 34049
205 Ga0496109_0013878 3300048912 Bacteria 7002
206 Ga0496109_0029869 3300048912 Bacteria 4884
207 Ga0496110_0001614 3300048913 Bacteria 16515
208 Ga0496110_0015236 3300048913 Bacteria 6395
209 Ga0496110_0017741 3300048913 Bacteria 5955
210 Ga0496111_0007962 3300048914 Bacteria 6989
211 Ga0496111_0068398 3300048914 Bacteria 2581
212 Ga0496112_0000563 3300048915 Bacteria 25479
213 Ga0496112_0000910 3300048915 Bacteria 21341
214 Ga0496112_0016020 3300048915 Bacteria 7009
215 Ga0496113_0001107 3300048916 Bacteria 14603
216 Ga0496113_0002708 3300048916 Bacteria 10404
217 Ga0496113_0004938 3300048916 Bacteria 8260
218 Ga0496114_0010949 3300048917 Bacteria 7231
219 Ga0496114_0115262 3300048917 Bacteria 2305
220 Ga0496115_0017967 3300048918 Bacteria 5418
221 Ga0496115_0036060 3300048918 Bacteria 3914
222 Ga0496115_0052065 3300048918 Bacteria 3283
223 Ga0496117_0059596 3300048920 Bacteria 2635
224 Ga0496118_0001710 3300048921 Bacteria 32039
225 Ga0496120_0044516 3300048923 Bacteria 2578
226 Ga0496126_0002626 3300048929 Bacteria 23908
227 Ga0501317_004807 3300049533 Bacteria 1422
228 Ga0501031_0006485 3300049568 Bacteria 7629
229 Ga0501031_0007022 3300049568 Bacteria 7349
230 Ga0501032_0002361 3300049569 Bacteria 14787
231 Ga0501032_0048003 3300049569 Bacteria 2882
232 Ga0501033_0002751 3300049570 Bacteria 14745
233 Ga0501033_0009541 3300049570 Bacteria 7468
234 Ga0501033_0022183 3300049570 Bacteria 4791
235 Ga0501033_0071741 3300049570 Bacteria 2543
236 Ga0501033_0118914 3300049570 Bacteria 1919
237 Ga0501034_0012965 3300049571 Bacteria 8592
238 Ga0501034_0036150 3300049571 Bacteria 5005
239 Ga0501034_0078949 3300049571 Bacteria 3295
240 Ga0501034_0121075 3300049571 Bacteria 2603
241 Ga0501036_0044035 3300049572 Bacteria 3779
242 Ga0501037_0008316 3300049573 Bacteria 7605
243 Ga0501037_0054686 3300049573 Bacteria 2919
244 Ga0501037_0074440 3300049573 Bacteria 2468
245 Ga0501038_0004800 3300049574 Bacteria 12556
246 Ga0501038_0034781 3300049574 Bacteria 4427
247 Ga0501039_0008755 3300049575 Bacteria 7709
248 Ga0501039_0054455 3300049575 Bacteria 3096
249 Ga0501040_0012979 3300049576 Bacteria 5477
250 Ga0501042_0014252 3300049578 Bacteria 5423
251 Ga0501042_0103744 3300049578 Bacteria 2046
252 Ga0501043_0012342 3300049579 Bacteria 6679
253 Ga0501043_0018804 3300049579 Bacteria 5422
254 Ga0501043_0073498 3300049579 Bacteria 2686
255 Ga0501043_0169045 3300049579 Bacteria 1706
256 Ga0501046_0001034 3300049580 Bacteria 27198
257 Ga0501046_0008019 3300049580 Bacteria 9230
258 Ga0501046_0017268 3300049580 Bacteria 6026
259 Ga0501047_0003657 3300049581 Bacteria 14496
260 Ga0501047_0061284 3300049581 Bacteria 3630
261 Ga0501047_0070524 3300049581 Bacteria 3364
262 Ga0501047_0288639 3300049581 Bacteria 1484
263 Ga0501048_0009770 3300049582 Bacteria 7193
264 Ga0501048_0063388 3300049582 Bacteria 2614
265 Ga0501067_0064548 3300049583 Bacteria 2027
266 Ga0501068_0020209 3300049584 Bacteria 3877
267 Ga0501069_0022652 3300049585 Bacteria 3420
268 Ga0501070_0000536 3300049586 Bacteria 34788
269 Ga0501070_0015878 3300049586 Bacteria 6331
270 Ga0501070_0030018 3300049586 Bacteria 4555
271 Ga0501070_0050545 3300049586 Bacteria 3451
272 Ga0501070_0051002 3300049586 Bacteria 3434
273 Ga0501070_0063832 3300049586 Bacteria 3051
274 Ga0501071_0051962 3300049587 Bacteria 2955
275 Ga0501072_0088004 3300049588 Bacteria 2464
276 Ga0501074_0030576 3300049590 Bacteria 3902
277 Ga0501075_0011025 3300049591 Bacteria 6379
278 Ga0501076_0009911 3300049592 Bacteria 7043
279 Ga0501077_0019743 3300049593 Bacteria 4263
280 Ga0501079_0085756 3300049741 Bacteria 2437
281 Ga0501080_0034684 3300049742 Bacteria 4712
282 Ga0501080_0067238 3300049742 Bacteria 3333
283 Ga0501080_0288006 3300049742 Bacteria 1492
284 Ga0501035_0010632 3300049822 Bacteria 8521
285 Ga0501035_0033061 3300049822 Bacteria 4703
286 Ga0501035_0059169 3300049822 Bacteria 3412
287 Ga0501035_0151006 3300049822 Bacteria 2016
288 Ga0501044_0003794 3300049823 Bacteria 16974
289 Ga0501044_0050854 3300049823 Bacteria 4275
290 Ga0501045_0015508 3300049824 Bacteria 5406
291 nmdc:mga05p37_238187_c1 3300050507 Unclassified 2189
292 nmdc:mga05p37_40822_c1 3300050507 Bacteria 5698
293 nmdc:mga05p37_821_c1 3300050507 Bacteria 34807
294 nmdc:mga09592_13744_c1 3300050508 Bacteria 4232
295 nmdc:mga09592_20588_c1 3300050508 Bacteria 5426
296 nmdc:mga08y16_486714_c1 3300050511 Bacteria 1255
297 nmdc:mga0n895_201_c1 3300050512 Bacteria 37245
298 nmdc:mga0n895_206353_c1 3300050512 Bacteria 1996
299 nmdc:mga0rr50_96459_c1 3300050513 Bacteria 2314
300 nmdc:mga08x19_148942_c1 3300050514 Bacteria 1584
301 nmdc:mga0a205_3162_c1 3300050515 Bacteria 14617
302 nmdc:mga0a205_69004_c2 3300050515 Unclassified 2991
303 nmdc:mga0a205_94278_c1 3300050515 Bacteria 2892
304 Ga0500635_0000078 3300053080 Bacteria 63528
305 Ga0500559_0000768 3300053136 Bacteria 21034
306 Ga0500559_0001378 3300053136 Bacteria 13874
307 Ga0500568_0000091 3300053139 Bacteria 85759
308 Ga0500577_0006900 3300053142 Bacteria 3156
309 Ga0500616_0000250 3300053153 Bacteria 83271
310 Ga0501084_0005377 3300054114 Bacteria 10497
311 Ga0590075_007425 3300059424 Bacteria 2605
312 Ga0501082_0068458 3300060353 Bacteria 3056
313 Ga0530510_0025671 3300061734 Bacteria 4214

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035398 Ga0316574_0111823 Ga0316574_0111823_207_1286 355
2 3300036712 Ga0316584_0000667 Ga0316584_0000667_803_1882 355
3 3300049570 Ga0501033_0022183 Ga0501033_0022183_3450_4604 363
4 3300049581 Ga0501047_0061284 Ga0501047_0061284_67_1221 363
5 3300031911 Ga0307412_10022222 Ga0307412_100222224 365
6 3300031995 Ga0307409_100028315 Ga0307409_1000283152 365
7 3300032126 Ga0307415_100010496 Ga0307415_1000104964 365
8 3300032126 Ga0307415_100166865 Ga0307415_1001668652 368
9 3300045051 Ga0451576_0080806 Ga0451576_0080806_1602_2759 373
10 3300050512 nmdc:mga0n895_206353_c1 nmdc:mga0n895_206353_c1_359_1516 373
11 3300050513 nmdc:mga0rr50_96459_c1 nmdc:mga0rr50_96459_c1_679_1836 373
12 3300050514 nmdc:mga08x19_148942_c1 nmdc:mga08x19_148942_c1_194_1351 373
13 iso_pu_bacteria 2654587600 2655031616 373
14 3300005288 Ga0065714_10067715 Ga0065714_100677154 374
15 3300005445 Ga0070708_100002014 Ga0070708_1000020148 374
16 3300025922 Ga0207646_10313493 Ga0207646_103134932 374
17 3300031665 Ga0316575_10012903 Ga0316575_100129031 374
18 3300031727 Ga0316576_10010648 Ga0316576_100106482 374
19 3300031728 Ga0316578_10013598 Ga0316578_100135981 374
20 3300031733 Ga0316577_10003606 Ga0316577_100036061 374
21 3300031733 Ga0316577_10075516 Ga0316577_100755161 374
22 3300035398 Ga0316574_0095993 Ga0316574_0095993_107_1267 374
23 3300036647 Ga0316582_0013067 Ga0316582_0013067_2347_3507 374
24 3300049573 Ga0501037_0074440 Ga0501037_0074440_386_1549 374
25 3300049576 Ga0501040_0012979 Ga0501040_0012979_4110_5273 374
26 3300049579 Ga0501043_0169045 Ga0501043_0169045_367_1530 374
27 3300049587 Ga0501071_0051962 Ga0501071_0051962_213_1376 374
28 3300049588 Ga0501072_0088004 Ga0501072_0088004_213_1376 374
29 3300049591 Ga0501075_0011025 Ga0501075_0011025_3470_4633 374
30 3300049592 Ga0501076_0009911 Ga0501076_0009911_1759_2922 374
31 3300049593 Ga0501077_0019743 Ga0501077_0019743_1332_2495 374
32 3300049742 Ga0501080_0034684 Ga0501080_0034684_1902_3065 374
33 3300050511 nmdc:mga08y16_486714_c1 nmdc:mga08y16_486714_c1_15_1175 374
34 3300054114 Ga0501084_0005377 Ga0501084_0005377_8326_9489 374
35 3300060353 Ga0501082_0068458 Ga0501082_0068458_320_1483 374
36 3300061734 Ga0530510_0025671 Ga0530510_0025671_2116_3279 374
37 iso_pu_bacteria 2554235227 2555229602 374
38 iso_pu_bacteria 2893684298 2893685959 374
39 3300005329 Ga0070683_100123140 Ga0070683_1001231402 375
40 3300005334 Ga0068869_100228946 Ga0068869_1002289461 375
41 3300005340 Ga0070689_100143391 Ga0070689_1001433912 375
42 3300005354 Ga0070675_100178937 Ga0070675_1001789371 375
43 3300005445 Ga0070708_100000866 Ga0070708_1000008667 375
44 3300005445 Ga0070708_100015439 Ga0070708_1000154392 375
45 3300005445 Ga0070708_100098367 Ga0070708_1000983671 375
46 3300005457 Ga0070662_100014384 Ga0070662_1000143843 375
47 3300005468 Ga0070707_100271827 Ga0070707_1002718272 375
48 3300005518 Ga0070699_100007453 Ga0070699_1000074536 375
49 3300005536 Ga0070697_100045736 Ga0070697_1000457363 375
50 3300005546 Ga0070696_100011811 Ga0070696_1000118113 375
51 3300005549 Ga0070704_100174108 Ga0070704_1001741082 375
52 3300005617 Ga0068859_100093987 Ga0068859_1000939872 375
53 3300005618 Ga0068864_100034504 Ga0068864_1000345043 375
54 3300005844 Ga0068862_100262157 Ga0068862_1002621571 375
55 3300006844 Ga0075428_100093071 Ga0075428_1000930713 375
56 3300006847 Ga0075431_100007340 Ga0075431_1000073409 375
57 3300006852 Ga0075433_10004894 Ga0075433_100048944 375
58 3300006852 Ga0075433_10079509 Ga0075433_100795091 375
59 3300006871 Ga0075434_100000281 Ga0075434_10000028125 375
60 3300006871 Ga0075434_100023663 Ga0075434_1000236633 375
61 3300006871 Ga0075434_100051556 Ga0075434_1000515563 375
62 3300006880 Ga0075429_100012633 Ga0075429_1000126334 375
63 3300006880 Ga0075429_100037924 Ga0075429_1000379242 375
64 3300006914 Ga0075436_100074792 Ga0075436_1000747922 375
65 3300006931 Ga0097620_100093988 Ga0097620_1000939883 375
66 3300007076 Ga0075435_100025294 Ga0075435_1000252943 375
67 3300009147 Ga0114129_10000510 Ga0114129_1000051011 375
68 3300009147 Ga0114129_10377193 Ga0114129_103771932 375
69 3300010375 Ga0105239_10017524 Ga0105239_100175245 375
70 3300014968 Ga0157379_10085262 Ga0157379_100852622 375
71 3300025910 Ga0207684_10085690 Ga0207684_100856902 375
72 3300025914 Ga0207671_10092637 Ga0207671_100926372 375
73 3300025922 Ga0207646_10297534 Ga0207646_102975342 375
74 3300025933 Ga0207706_10161164 Ga0207706_101611641 375
75 3300026095 Ga0207676_10018453 Ga0207676_100184532 375
76 3300028380 Ga0268265_10201816 Ga0268265_102018162 375
77 3300031548 Ga0307408_100015268 Ga0307408_1000152684 375
78 3300031824 Ga0307413_10008339 Ga0307413_100083392 375
79 3300031824 Ga0307413_10021563 Ga0307413_100215633 375
80 3300031901 Ga0307406_10033183 Ga0307406_100331832 375
81 3300031995 Ga0307409_100137241 Ga0307409_1001372412 375
82 3300032002 Ga0307416_100004072 Ga0307416_1000040725 375
83 3300032004 Ga0307414_10004514 Ga0307414_100045145 375
84 3300032004 Ga0307414_10100706 Ga0307414_101007062 375
85 3300032004 Ga0307414_10250522 Ga0307414_102505221 375
86 3300032005 Ga0307411_10012513 Ga0307411_100125133 375
87 3300032005 Ga0307411_10019849 Ga0307411_100198492 375
88 3300034816 Ga0373930_0013702 Ga0373930_0013702_57_1232 375
89 3300035088 Ga0373940_0026517 Ga0373940_0026517_121_1296 375
90 3300035691 Ga0373931_0026535 Ga0373931_0026535_991_2166 375
91 3300035691 Ga0373931_0068769 Ga0373931_0068769_234_1409 375
92 3300037471 Ga0395905_0051515 Ga0395905_0051515_2505_3680 375
93 3300038996 Ga0242420_000786 Ga0242420_000786_2258_3427 375
94 3300041406 Ga0439439_0000278 Ga0439439_0000278_4633_5805 375
95 3300044673 Ga0453683_0023050 Ga0453683_0023050_1052_2221 375
96 3300044712 Ga0453684_0568448 Ga0453684_0568448_42_1217 375
97 3300046472 Ga0495580_0055818 Ga0495580_0055818_69_1241 375
98 3300046475 Ga0495639_0040536 Ga0495639_0040536_631_1800 375
99 3300046499 Ga0495594_0011112 Ga0495594_0011112_3048_4217 375
100 3300046499 Ga0495594_0076318 Ga0495594_0076318_187_1353 375
101 3300046514 Ga0495618_0005155 Ga0495618_0005155_6345_7514 375
102 3300046517 Ga0495630_0023508 Ga0495630_0023508_1839_3008 375
103 3300046526 Ga0495666_0000448 Ga0495666_0000448_7750_8919 375
104 3300046531 Ga0495665_0037633 Ga0495665_0037633_465_1634 375
105 3300046533 Ga0495640_0002105 Ga0495640_0002105_12335_13504 375
106 3300046535 Ga0495586_0003227 Ga0495586_0003227_4857_6026 375
107 3300046557 Ga0495622_0039954 Ga0495622_0039954_46_1215 375
108 3300046642 Ga0495634_0001867 Ga0495634_0001867_5196_6365 375
109 3300046681 Ga0495647_0016088 Ga0495647_0016088_1141_2310 375
110 3300046683 Ga0495658_0000883 Ga0495658_0000883_4783_5952 375
111 3300047319 Ga0495674_0008579 Ga0495674_0008579_496_1665 375
112 3300047322 Ga0495680_0005987 Ga0495680_0005987_5366_6535 375
113 3300048903 Ga0496100_0182014 Ga0496100_0182014_200_1372 375
114 3300048904 Ga0496101_0080525 Ga0496101_0080525_1102_2274 375
115 3300048905 Ga0496102_0013420 Ga0496102_0013420_5124_6299 375
116 3300048905 Ga0496102_0032949 Ga0496102_0032949_2248_3420 375
117 3300048906 Ga0496103_0003800 Ga0496103_0003800_2704_3876 375
118 3300048908 Ga0496105_0061547 Ga0496105_0061547_1581_2756 375
119 3300048909 Ga0496106_0062683 Ga0496106_0062683_1258_2427 375
120 3300048911 Ga0496108_0000243 Ga0496108_0000243_19849_21024 375
121 3300048911 Ga0496108_0008036 Ga0496108_0008036_1653_2825 375
122 3300048911 Ga0496108_0020025 Ga0496108_0020025_42_1217 375
123 3300048912 Ga0496109_0000477 Ga0496109_0000477_10476_11651 375
124 3300048912 Ga0496109_0013878 Ga0496109_0013878_3213_4388 375
125 3300048912 Ga0496109_0029869 Ga0496109_0029869_1431_2603 375
126 3300048913 Ga0496110_0001614 Ga0496110_0001614_4492_5667 375
127 3300048913 Ga0496110_0015236 Ga0496110_0015236_2315_3490 375
128 3300048913 Ga0496110_0017741 Ga0496110_0017741_2384_3556 375
129 3300048914 Ga0496111_0007962 Ga0496111_0007962_1618_2790 375
130 3300048914 Ga0496111_0068398 Ga0496111_0068398_1365_2540 375
131 3300048915 Ga0496112_0000563 Ga0496112_0000563_20017_21192 375
132 3300048915 Ga0496112_0000910 Ga0496112_0000910_9349_10524 375
133 3300048915 Ga0496112_0016020 Ga0496112_0016020_4236_5408 375
134 3300048916 Ga0496113_0001107 Ga0496113_0001107_8974_10149 375
135 3300048916 Ga0496113_0002708 Ga0496113_0002708_6580_7755 375
136 3300048916 Ga0496113_0004938 Ga0496113_0004938_5731_6903 375
137 3300049571 Ga0501034_0078949 Ga0501034_0078949_386_1552 375
138 3300049741 Ga0501079_0085756 Ga0501079_0085756_375_1547 375
139 3300049742 Ga0501080_0067238 Ga0501080_0067238_1257_2426 375
140 3300049742 Ga0501080_0288006 Ga0501080_0288006_11_1177 375
141 3300050507 nmdc:mga05p37_238187_c1 nmdc:mga05p37_238187_c1_755_2005 375
142 3300050507 nmdc:mga05p37_40822_c1 nmdc:mga05p37_40822_c1_3123_4292 375
143 3300050507 nmdc:mga05p37_821_c1 nmdc:mga05p37_821_c1_17040_18260 375
144 3300050508 nmdc:mga09592_13744_c1 nmdc:mga09592_13744_c1_786_2006 375
145 3300050508 nmdc:mga09592_20588_c1 nmdc:mga09592_20588_c1_2583_3752 375
146 3300050512 nmdc:mga0n895_201_c1 nmdc:mga0n895_201_c1_20116_21285 375
147 3300050515 nmdc:mga0a205_3162_c1 nmdc:mga0a205_3162_c1_4079_5248 375
148 3300050515 nmdc:mga0a205_69004_c2 nmdc:mga0a205_69004_c2_294_1466 375
149 3300050515 nmdc:mga0a205_94278_c1 nmdc:mga0a205_94278_c1_1559_2779 375
150 3300059424 Ga0590075_007425 Ga0590075_007425_1286_2458 375
151 iso_pu_bacteria 2643221616 2644094793 375
152 iso_pu_bacteria 2884763398 2884764148 375
153 3300028558 Ga0265326_10005697 Ga0265326_100056972 376
154 3300028563 Ga0265319_1044204 Ga0265319_10442041 376
155 3300031250 Ga0265331_10019735 Ga0265331_100197352 376
156 3300031911 Ga0307412_10020005 Ga0307412_100200053 376
157 3300049570 Ga0501033_0118914 Ga0501033_0118914_357_1529 376
158 3300049581 Ga0501047_0003657 Ga0501047_0003657_7895_9067 376
159 3300049586 Ga0501070_0063832 Ga0501070_0063832_1825_2997 376
160 3300049822 Ga0501035_0033061 Ga0501035_0033061_33_1205 376
161 3300049823 Ga0501044_0003794 Ga0501044_0003794_10810_11982 376
162 3300053136 Ga0500559_0000768 Ga0500559_0000768_6482_7639 376
163 3300053136 Ga0500559_0001378 Ga0500559_0001378_7390_8544 376
164 iso_pu_bacteria 2811994872 2812325150 376
165 iso_pu_bacteria 2919042368 2919042862 376
166 iso_pu_bacteria 2966921586 2966923204 376
167 iso_pu_bacteria 2984551494 2984554855 376
168 3300005327 Ga0070658_10000257 Ga0070658_100002573 377
169 3300005366 Ga0070659_100056490 Ga0070659_1000564901 377
170 3300005563 Ga0068855_100050754 Ga0068855_1000507542 377
171 3300013104 Ga0157370_10264844 Ga0157370_102648441 377
172 3300025904 Ga0207647_10040432 Ga0207647_100404322 377
173 3300025909 Ga0207705_10000001 Ga0207705_100000011403 377
174 3300025932 Ga0207690_10004731 Ga0207690_100047316 377
175 3300025949 Ga0207667_10065925 Ga0207667_100659252 377
176 3300026067 Ga0207678_10041659 Ga0207678_100416592 377
177 3300031995 Ga0307409_100051605 Ga0307409_1000516052 377
178 3300032002 Ga0307416_100006492 Ga0307416_1000064922 377
179 3300037312 Ga0395899_0005605 Ga0395899_0005605_3358_4512 377
180 3300037418 Ga0395900_0015828 Ga0395900_0015828_6521_7666 377
181 3300037418 Ga0395900_0131020 Ga0395900_0131020_202_1356 377
182 3300037466 Ga0395898_0013888 Ga0395898_0013888_2644_3810 377
183 3300037466 Ga0395898_0021880 Ga0395898_0021880_4776_5930 377
184 3300037466 Ga0395898_0203554 Ga0395898_0203554_728_1873 377
185 3300037466 Ga0395898_0297627 Ga0395898_0297627_249_1403 377
186 3300037471 Ga0395905_0056541 Ga0395905_0056541_1376_2542 377
187 3300038443 Ga0395901_0008746 Ga0395901_0008746_654_1808 377
188 3300044765 Ga0466970_0069574 Ga0466970_0069574_560_1714 377
189 3300053142 Ga0500577_0006900 Ga0500577_0006900_41_1207 377
190 iso_pu_bacteria 2643221572 2643877623 377
191 iso_pu_bacteria 2643221632 2644181208 377
192 iso_pu_bacteria 2643221669 2644384678 377
193 iso_pu_bacteria 2775506735 2775654752 377
194 iso_pu_bacteria 2808606357 2808828023 377
195 iso_pu_bacteria 2808606360 2808853377 377
196 iso_pu_bacteria 2808606366 2808878124 377
197 iso_pu_bacteria 2808606371 2808897362 377
198 iso_pu_bacteria 2808606372 2808903669 377
199 iso_pu_bacteria 2816332305 2817510018 377
200 iso_pu_bacteria 2852643534 2852643552 377
201 iso_pu_bacteria 2857740372 2857744238 377
202 iso_pu_bacteria 2862993130 2862994453 377
203 iso_pu_bacteria 2895660088 2895662461 377
204 iso_pu_bacteria 2904497146 2904500237 377
205 iso_pu_bacteria 2904776348 2904776974 377
206 iso_pu_bacteria 2905926851 2905929308 377
207 iso_pu_bacteria 2910809715 2910812807 377
208 iso_pu_bacteria 2919391150 2919392949 377
209 iso_pu_bacteria 2919443155 2919444061 377
210 iso_pu_bacteria 2919523602 2919527035 377
211 iso_pu_bacteria 2919538618 2919540967 377
212 iso_pu_bacteria 2920879853 2920879882 377
213 iso_pu_bacteria 2933418574 2933419733 377
214 iso_pu_bacteria 2945920336 2945921744 377
215 iso_pu_bacteria 2945941187 2945942037 377
216 iso_pu_bacteria 2945956166 2945960186 377
217 iso_pu_bacteria 2946037020 2946038018 377
218 iso_pu_bacteria 2946059875 2946061803 377
219 iso_pu_bacteria 2953998280 2953999300 377
220 iso_pu_bacteria 2964326757 2964327546 377
221 iso_pu_bacteria 2974302888 2974306009 377
222 3300013102 Ga0157371_10005337 Ga0157371_100053373 378
223 3300013105 Ga0157369_10000225 Ga0157369_1000022556 378
224 3300031649 Ga0307514_10009243 Ga0307514_100092434 378
225 3300038443 Ga0395901_0040272 Ga0395901_0040272_1404_2555 378
226 3300044765 Ga0466970_0038666 Ga0466970_0038666_904_2064 378
227 3300044765 Ga0466970_0046610 Ga0466970_0046610_31_1209 378
228 3300048929 Ga0496126_0002626 Ga0496126_0002626_22661_23809 378
229 3300049571 Ga0501034_0036150 Ga0501034_0036150_2271_3425 378
230 3300049579 Ga0501043_0073498 Ga0501043_0073498_1145_2299 378
231 3300049580 Ga0501046_0008019 Ga0501046_0008019_40_1194 378
232 3300049581 Ga0501047_0288639 Ga0501047_0288639_110_1264 378
233 3300049586 Ga0501070_0050545 Ga0501070_0050545_2256_3410 378
234 3300049823 Ga0501044_0050854 Ga0501044_0050854_295_1449 378
235 3300053139 Ga0500568_0000091 Ga0500568_0000091_78024_79193 378
236 3300053153 Ga0500616_0000250 Ga0500616_0000250_13738_15009 378
237 iso_pu_bacteria 2643221649 2644278973 378
238 3300002772 JGI25164J39214_1000209 JGI25164J39214_100020934 379
239 3300003214 JGI25165J46597_1000125 JGI25165J46597_100012578 379
240 3300003214 JGI25165J46597_1001412 JGI25165J46597_10014127 379
241 3300003752 Ga0055539_1000135 Ga0055539_100013546 379
242 3300003756 Ga0055533_1000002 Ga0055533_100000239 379
243 3300003759 Ga0055525_1000303 Ga0055525_10003038 379
244 3300003760 Ga0055527_1000003 Ga0055527_1000003179 379
245 3300003762 Ga0055542_1000005 Ga0055542_100000543 379
246 3300003763 Ga0055529_1000006 Ga0055529_1000006179 379
247 3300003841 Ga0055541_1003270 Ga0055541_10032702 379
248 3300005327 Ga0070658_10089296 Ga0070658_100892961 379
249 3300009551 Ga0105238_10316264 Ga0105238_103162642 379
250 3300013105 Ga0157369_10074908 Ga0157369_100749082 379
251 3300013105 Ga0157369_10118795 Ga0157369_101187952 379
252 3300013307 Ga0157372_10138525 Ga0157372_101385252 379
253 3300014326 Ga0157380_10023943 Ga0157380_100239433 379
254 3300020081 Ga0206354_10082925 Ga0206354_100829256 379
255 3300020082 Ga0206353_10047484 Ga0206353_100474847 379
256 3300025225 Ga0209566_100032 Ga0209566_10003239 379
257 3300025226 Ga0209674_100001 Ga0209674_1000013527 379
258 3300025228 Ga0209672_100003 Ga0209672_1000031018 379
259 3300025229 Ga0209147_101421 Ga0209147_1014218 379
260 3300025230 Ga0209563_100001 Ga0209563_1000013527 379
261 3300025231 Ga0207427_100039 Ga0207427_100039125 379
262 3300025253 Ga0209677_100001 Ga0209677_1000013527 379
263 3300025253 Ga0209677_101506 Ga0209677_1015063 379
264 3300025254 Ga0209148_1000004 Ga0209148_10000041313 379
265 3300025256 Ga0209759_1007917 Ga0209759_10079174 379
266 3300025261 Ga0209233_1000014 Ga0209233_1000014393 379
267 3300025272 Ga0209455_1000046 Ga0209455_1000046332 379
268 3300025303 Ga0209051_1018006 Ga0209051_10180061 379
269 3300025904 Ga0207647_10042402 Ga0207647_100424021 379
270 3300026118 Ga0207675_100069919 Ga0207675_1000699193 379
271 3300031548 Ga0307408_100008509 Ga0307408_1000085096 379
272 3300031731 Ga0307405_10072627 Ga0307405_100726272 379
273 3300031731 Ga0307405_10172924 Ga0307405_101729242 379
274 3300031824 Ga0307413_10007497 Ga0307413_100074973 379
275 3300031824 Ga0307413_10035178 Ga0307413_100351782 379
276 3300031852 Ga0307410_10003652 Ga0307410_100036524 379
277 3300031852 Ga0307410_10021662 Ga0307410_100216623 379
278 3300031903 Ga0307407_10038435 Ga0307407_100384352 379
279 3300031903 Ga0307407_10061925 Ga0307407_100619252 379
280 3300031911 Ga0307412_10008570 Ga0307412_100085705 379
281 3300031995 Ga0307409_100090717 Ga0307409_1000907172 379
282 3300032002 Ga0307416_100017386 Ga0307416_1000173863 379
283 3300032002 Ga0307416_100108872 Ga0307416_1001088721 379
284 3300032004 Ga0307414_10044304 Ga0307414_100443043 379
285 3300032004 Ga0307414_10219032 Ga0307414_102190322 379
286 3300032005 Ga0307411_10013560 Ga0307411_100135605 379
287 3300037312 Ga0395899_0009534 Ga0395899_0009534_5591_6736 379
288 3300037312 Ga0395899_0069107 Ga0395899_0069107_109_1257 379
289 3300037418 Ga0395900_0087138 Ga0395900_0087138_1105_2253 379
290 3300037466 Ga0395898_0000611 Ga0395898_0000611_9315_10463 379
291 3300038443 Ga0395901_0023396 Ga0395901_0023396_3764_4927 379
292 3300038443 Ga0395901_0083523 Ga0395901_0083523_2025_3188 379
293 3300041452 Ga0451793_1097870 Ga0451793_1097870_605_1762 379
294 3300044658 Ga0466972_0006515 Ga0466972_0006515_3754_4899 379
295 3300044684 Ga0466966_0084967 Ga0466966_0084967_235_1380 379
296 3300044735 Ga0466968_0014128 Ga0466968_0014128_1941_3086 379
297 3300044765 Ga0466970_0015468 Ga0466970_0015468_2086_3231 379
298 3300044765 Ga0466970_0174583 Ga0466970_0174583_28_1173 379
299 3300045049 Ga0466959_0002118 Ga0466959_0002118_10023_11168 379
300 3300045836 Ga0466958_0029418 Ga0466958_0029418_1216_2361 379
301 3300046472 Ga0495580_0020865 Ga0495580_0020865_73_1236 379
302 3300046535 Ga0495586_0113320 Ga0495586_0113320_308_1471 379
303 3300048904 Ga0496101_0063542 Ga0496101_0063542_828_1973 379
304 3300048905 Ga0496102_0046412 Ga0496102_0046412_2127_3287 379
305 3300048907 Ga0496104_0039460 Ga0496104_0039460_543_1688 379
306 3300048908 Ga0496105_0028574 Ga0496105_0028574_1095_2246 379
307 3300048908 Ga0496105_0171713 Ga0496105_0171713_395_1549 379
308 3300048910 Ga0496107_0234535 Ga0496107_0234535_43_1188 379
309 3300048917 Ga0496114_0010949 Ga0496114_0010949_719_1864 379
310 3300048917 Ga0496114_0115262 Ga0496114_0115262_846_2000 379
311 3300048918 Ga0496115_0017967 Ga0496115_0017967_2452_3606 379
312 3300048918 Ga0496115_0036060 Ga0496115_0036060_1568_2722 379
313 3300048918 Ga0496115_0052065 Ga0496115_0052065_2113_3258 379
314 3300048920 Ga0496117_0059596 Ga0496117_0059596_1427_2590 379
315 3300048921 Ga0496118_0001710 Ga0496118_0001710_29_1192 379
316 3300048923 Ga0496120_0044516 Ga0496120_0044516_224_1369 379
317 3300049533 Ga0501317_004807 Ga0501317_004807_68_1228 379
318 3300049568 Ga0501031_0006485 Ga0501031_0006485_3486_4664 379
319 3300049568 Ga0501031_0007022 Ga0501031_0007022_4314_5492 379
320 3300049569 Ga0501032_0002361 Ga0501032_0002361_2974_4137 379
321 3300049569 Ga0501032_0048003 Ga0501032_0048003_670_1848 379
322 3300049570 Ga0501033_0002751 Ga0501033_0002751_162_1340 379
323 3300049570 Ga0501033_0009541 Ga0501033_0009541_298_1476 379
324 3300049570 Ga0501033_0071741 Ga0501033_0071741_162_1340 379
325 3300049571 Ga0501034_0012965 Ga0501034_0012965_2643_3821 379
326 3300049571 Ga0501034_0121075 Ga0501034_0121075_232_1398 379
327 3300049572 Ga0501036_0044035 Ga0501036_0044035_1715_2893 379
328 3300049573 Ga0501037_0008316 Ga0501037_0008316_3802_4971 379
329 3300049573 Ga0501037_0054686 Ga0501037_0054686_748_1911 379
330 3300049574 Ga0501038_0004800 Ga0501038_0004800_477_1655 379
331 3300049574 Ga0501038_0034781 Ga0501038_0034781_670_1848 379
332 3300049575 Ga0501039_0008755 Ga0501039_0008755_2565_3743 379
333 3300049575 Ga0501039_0054455 Ga0501039_0054455_1476_2654 379
334 3300049578 Ga0501042_0014252 Ga0501042_0014252_1766_2944 379
335 3300049578 Ga0501042_0103744 Ga0501042_0103744_525_1703 379
336 3300049579 Ga0501043_0012342 Ga0501043_0012342_2270_3448 379
337 3300049579 Ga0501043_0018804 Ga0501043_0018804_1344_2522 379
338 3300049580 Ga0501046_0001034 Ga0501046_0001034_24089_25267 379
339 3300049580 Ga0501046_0017268 Ga0501046_0017268_3384_4562 379
340 3300049581 Ga0501047_0070524 Ga0501047_0070524_98_1276 379
341 3300049582 Ga0501048_0009770 Ga0501048_0009770_3657_4835 379
342 3300049582 Ga0501048_0063388 Ga0501048_0063388_162_1340 379
343 3300049583 Ga0501067_0064548 Ga0501067_0064548_439_1617 379
344 3300049584 Ga0501068_0020209 Ga0501068_0020209_1227_2405 379
345 3300049585 Ga0501069_0022652 Ga0501069_0022652_2208_3386 379
346 3300049586 Ga0501070_0000536 Ga0501070_0000536_2092_3237 379
347 3300049586 Ga0501070_0015878 Ga0501070_0015878_2089_3267 379
348 3300049586 Ga0501070_0030018 Ga0501070_0030018_2806_3969 379
349 3300049586 Ga0501070_0051002 Ga0501070_0051002_1703_2881 379
350 3300049590 Ga0501074_0030576 Ga0501074_0030576_897_2075 379
351 3300049822 Ga0501035_0010632 Ga0501035_0010632_4404_5582 379
352 3300049822 Ga0501035_0059169 Ga0501035_0059169_698_1864 379
353 3300049822 Ga0501035_0151006 Ga0501035_0151006_782_1927 379
354 3300049824 Ga0501045_0015508 Ga0501045_0015508_3065_4243 379
355 3300053080 Ga0500635_0000078 Ga0500635_0000078_13644_14792 379
356 iso_pu_bacteria 2585428094 2587864633 379
357 iso_pu_bacteria 2857479173 2857479930 379
358 iso_pu_bacteria 2857632687 2857633137 379
359 iso_pu_bacteria 2870801768 2870804050 379
360 iso_pu_bacteria 2870804320 2870805948 379

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

16

395

0.96

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

40

236

0.83

PF00155

Aminotran_1_2

Aminotransferase class I and II

40

226

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qi6-assembly1.cif.gz_C crystal structure of cystathionine gamma-synthase metb (cgs) from mycobacterium ulcerans agy99 0.9779 1 377
3qhx-assembly1.cif.gz_B crystal structure of cystathionine gamma-synthase metb (cgs) from mycobacterium ulcerans agy99 bound to hepes 0.9759 1 377
4l0o-assembly2.cif.gz_O-2 structure determination of cystathionine gamma-synthase from helicobacter pylori 0.975 1 378
4l0o-assembly3.cif.gz_A structure determination of cystathionine gamma-synthase from helicobacter pylori 0.9747 1 378
3qi6-assembly1.cif.gz_D crystal structure of cystathionine gamma-synthase metb (cgs) from mycobacterium ulcerans agy99 0.9743 2 376
ID Description Score Start End Superfamily
af_P9WGB7_1_258_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9793 1 247 3.40.640.10
af_Q55DV9_2_251_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9726 1 247 3.40.640.10
2nmpB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9676 250 378 3.90.1150.10
af_A0A0P0VYR6_1_109_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9665 139 247 3.40.640.10
3ri6B02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9649 251 376 3.90.1150.10
ID Description Score Start End GO Terms
AF-T0JSG8-F1-model_v4 cystathionine gamma-lyase (EC 4.4.1.1) (Gamma-cystathionase) 0.9831 153 305 GO:0003962
GO:0004123
GO:0005737
GO:0019343
GO:0019346
GO:0030170
AF-A0A1I6HTJ4-F1-model_v4 Cystathionine beta-synthase 0.9817 2 379 GO:0003962
GO:0004123
GO:0005737
GO:0006535
GO:0019343
GO:0019346
GO:0030170
AF-A0A1I0U6M4-F1-model_v4 Cystathionine gamma-lyase 0.9807 1 377 GO:0003962
GO:0004123
GO:0005737
GO:0009086
GO:0019343
GO:0019346
GO:0030170
AF-A0A3C1JIY5-F1-model_v4 deleted 0.9805 159 378
AF-A0A0Q7NXQ8-F1-model_v4 Cystathionine gamma-synthase 0.9793 1 377 GO:0003962
GO:0004123
GO:0005737
GO:0009086
GO:0019343
GO:0019346
GO:0030170

Feature Viewer

pLDDT pTM Quality
92.44 0.92 High
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Predicted Structure (AlphaFold2)

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