F420971

General Info

Members Datasets Scaffolds Average Seq Length
357 281 254 1176

Family's Representative Sequence

Representative Sequence 3300048911|Ga0496108_0003513|Ga0496108_0003513_4364_8536
Length 1384
Sequence MAGDGFVHLHVHTEYSMLDGAAQLKPLFAETSRLGMSAVAMTDHGNMFGAFGFYQEAKASGVKPIIGIEAYLAPEDRFHKKPVFWGGPGDRADDISAGGAYTHMTMLAESAEGLRNLFKLSSLASIEGFYYKPRMDRELISRYAKGLIATTGCPSGEVQTRLRLGQPAEALDAAAAYQDIFGRDSFFLELMEHGIEIEKRVRTGLLEIARKLNMPLLASNDSHYVTQDQAPTHEALLCVGSGRTLDDPKRFRLEGDGYYLRTADEMRALFPGELAEACDNTLLVAERIGPYDEVFAEVNRMPLFPVPDGETQQSWLAKETYAGLAERFPDGYDAEYSERVDYELKIIEEMGFPAYFLVVADIVNYAKRNGIRVAPGRGSATGCLVAYALGIVDLDPIVHKLIFERFLNPERISMPDIDLDFDERRRGEMIRYVTERWGDEKVCQIITFGTIKAKAAIKDASRVLGHPYAVGERLTKAFPPAVMGKDIPLKGIVDQTHERYGEAAEVRSLIESDPVSAKVFETARGLEGLIRQPGVHAAGVILSSQPLLEVLPIWRREDGSIISGWDYPSCESVGLLKMDFLGLRNLTVIDDAVNNVRANREASFDLSAERLEDDKTYDLLAAGDTLGVFQLDGGPMRALLRAMAPTRFEDIAAVLALYRPGPMAANAHIDYADRKNGRKPVVPIHEEFRESLADILDTTYGLIVFQEQVLAIAQRVAGYSLGKADMLRRAMGKKKKEILDKEFEPFAAGMRDNGYGDVAIRTLWEILVPFAGYAFNKSHTAGYGIISFWTAYLKANYPAEFMAALLTSVGDDKDKMAIYLAECRRMGVRVLAPDINSSTLQFTPVGEEIRFGLGAIRNVGANVVASIVDTRQKGGPYTSFADFLQRSELVVCNKRTVESLIKAGAFDSLGHTRRGLLDHHSQAIDAVIGIKRDAAVGQFDLFSELVDDEPDAPIIGLNFDFEREEWPHKVKLDFEKEMLGLYVSSHPLAGAERLLRKHGENPVASLLDDEVADGTQVVIAGLITTLQRRVTREGKSWAIATIEDLSASIEVLFFPKSYELFGGELAEGVAVAVRGRINRRENAVTVVGMDLMVLDLTTVSPDGTTPVVVVAEAKQINAELVQEFRRILTSHQGSSPLQLRLRSPGGGSKMFAFHDYPVDPSPSFLSEVKGLLGRACIESRGPVAPPPASRRHPRRDSPRSAQLSTSCGVFRFATPQLMDSCVDLGMMDSHEVDRGEVADQAGRRGVVIAHRPAGPGRTAPGRSRHDGRDGYGGRVARLAAQDPDQAAAPPAETDRVLGRLPQGQPHRYQPRLAVADPVRVRHAPDHAGRGRRHLVRAAVPGAQGGRGPLHRRPLATPQMSLAAGRGHGPDHETGQHRPGGQSFQ

Samples

Sample ID Description Type Environment
1 2506783011 Frankia datiscae Dg1 Isolate Nodule
2 2508501039 Frankia saprophytica CN3 Isolate Nodule
3 2517572101 Frankia sp. DC12 Isolate Nodule
4 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
5 2527291627 Frankia casuarinae Thr Isolate Nodule
6 2527291629 Frankia sp. BMG5.23 Isolate Nodule
7 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
8 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
9 2576861822 Frankia sp. CeD Isolate Nodule
10 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
11 2619618881 Frankia sp. ACN1ag Isolate Unclassified
12 2619619003 Frankia sp. CpI1-P Isolate Nodule
13 2626541554 Frankia sp. AvcI.1 Isolate Nodule
14 2643221615 Nocardioides sp. Root224 Isolate Unclassified
15 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
16 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
17 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
18 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
19 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
20 2671180195 Frankia sp. CcI49 Isolate Nodule
21 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
22 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
23 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
24 2687453737 Frankia sp. BMG5.36 Isolate Nodule
25 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
26 2710264753 Frankia sp. KB5 Isolate Nodule
27 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
28 2739367653 Kocuria sp. OV113 Isolate Unclassified
29 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
30 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
31 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
32 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
33 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
34 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
35 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
36 2773857922 Frankia sp. CcI49 Isolate Nodule
37 2773857933 Frankia sp. BMG5.30 Isolate Nodule
38 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
39 2808606372 Agromyces sp. 23-23 Isolate Unclassified
40 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
41 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
42 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
43 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
44 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
45 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
46 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
47 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
48 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
49 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
50 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
51 2857727296 Kocuria sp. R-72562 Isolate Unclassified
52 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
53 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
54 2858868258 Micromonospora sp. MH33 Isolate Unclassified
55 2858882152 Micromonospora noduli MED15 Isolate Nodule
56 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
57 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
58 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
59 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
60 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
61 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
62 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
63 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
64 2902582711 Micromonospora sp. AP08 Isolate Unclassified
65 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
66 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
67 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
68 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
69 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
70 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
71 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
72 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
73 2920879853 Kocuria salina CV6 Isolate Unclassified
74 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
75 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
76 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
77 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
78 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
79 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
80 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
81 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
82 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
83 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
84 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
85 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
86 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
87 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
88 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
89 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
90 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
91 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
92 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
93 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
94 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
95 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
96 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
97 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
98 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
99 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
100 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
101 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
102 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
103 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
104 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
105 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
106 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
107 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
108 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
109 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
110 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
111 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
112 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
113 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
114 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
115 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
116 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
117 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
118 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
119 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
120 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
121 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
122 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
123 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
124 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
125 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
151 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
154 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
155 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
156 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
157 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
158 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
159 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
160 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
161 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
162 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
163 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
164 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
165 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
166 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
167 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
168 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
169 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
170 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
171 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
172 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
173 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
174 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
175 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
176 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
177 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
178 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
179 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
180 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
181 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
182 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
183 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
184 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
185 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
186 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
187 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
188 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
189 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
190 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
191 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
192 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
193 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
194 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
195 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
196 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
197 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
198 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
199 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
200 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
201 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
202 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
203 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
204 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
205 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
206 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
207 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
208 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
209 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
210 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
211 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
212 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
213 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
214 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
215 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
216 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
217 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
218 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
219 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
220 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
221 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
222 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
223 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
224 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
225 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
226 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
227 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
228 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
229 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
230 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
231 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
232 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
233 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
234 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
235 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
236 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
237 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
238 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
239 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
240 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
241 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
242 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
243 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
244 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
245 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
246 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
247 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
248 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
249 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
250 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
251 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
252 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
253 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
254 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
255 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
256 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
257 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
258 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
259 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
260 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
261 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
262 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
263 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
264 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
265 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
266 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
267 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
268 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
269 637000116 Frankia casuarinae CcI3 Isolate Nodule
270 8002775197 Frankia nepalensis CN7 Isolate Nodule
271 8002784119 Frankia sp. AgB1.9 Isolate Nodule
272 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
273 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
274 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
275 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
276 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
277 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
278 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
279 8054920844 Frankia tisae Agncl-8 Isolate Nodule
280 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
281 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 71.15
Metatranscriptomes 0
Isolates 28.85

Biome Distribution

Category Percentage (%)
Aerial Root 0.28
Bulb 0
Endosphere 5.32
Nodule 8.96
Rhizoplane 5.6
Rhizosphere 57.14
Stem 0
Stem Tuber 0
Unclassified 22.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10004438 3300002067 Bacteria 4719
2 Ga0070658_10019461 3300005327 Bacteria 5435
3 Ga0070687_100009900 3300005343 Bacteria 4098
4 Ga0070673_100019102 3300005364 Bacteria 4916
5 Ga0070709_10006198 3300005434 Bacteria 6509
6 Ga0070714_100001824 3300005435 Bacteria 15486
7 Ga0070714_100006524 3300005435 Bacteria 9020
8 Ga0070711_100011683 3300005439 Bacteria 5459
9 Ga0070708_100022059 3300005445 Bacteria 5397
10 Ga0070662_100029075 3300005457 Bacteria 3854
11 Ga0070681_10037564 3300005458 Bacteria 4859
12 Ga0070706_100043476 3300005467 Bacteria 4152
13 Ga0070698_100000192 3300005471 Bacteria 58336
14 Ga0070698_100001213 3300005471 Bacteria 28680
15 Ga0070699_100001377 3300005518 Bacteria 22335
16 Ga0070679_100006418 3300005530 Bacteria 10953
17 Ga0070686_100014401 3300005544 Bacteria 4560
18 Ga0070665_100019325 3300005548 Bacteria 6837
19 Ga0068855_100007872 3300005563 Bacteria 12876
20 Ga0068852_100003890 3300005616 Bacteria 10492
21 Ga0068859_100000072 3300005617 Bacteria 93515
22 Ga0068859_100013211 3300005617 Bacteria 8288
23 Ga0068864_100019227 3300005618 Bacteria 5709
24 Ga0068863_100000217 3300005841 Bacteria 61785
25 Ga0068858_100000073 3300005842 Bacteria 104882
26 Ga0068858_100004962 3300005842 Bacteria 13037
27 Ga0068860_100001854 3300005843 Bacteria 22488
28 Ga0068860_100036594 3300005843 Bacteria 4702
29 Ga0068862_100002576 3300005844 Bacteria 16011
30 Ga0081540_1000322 3300005983 Bacteria 49507
31 Ga0081539_10004512 3300005985 Bacteria 15299
32 Ga0081539_10022946 3300005985 Bacteria 4105
33 Ga0075365_10000582 3300006038 Bacteria 14203
34 Ga0075365_10013642 3300006038 Bacteria 4871
35 Ga0075368_10005900 3300006042 Bacteria 4242
36 Ga0075363_100002681 3300006048 Bacteria 7354
37 Ga0097621_100027179 3300006237 Bacteria 4497
38 Ga0075428_100000182 3300006844 Bacteria 58871
39 Ga0075430_100001967 3300006846 Bacteria 16908
40 Ga0097620_100000072 3300006931 Bacteria 93515
41 Ga0097620_100013211 3300006931 Bacteria 8288
42 Ga0105245_10001461 3300009098 Bacteria 21372
43 Ga0105247_10000042 3300009101 Bacteria 158046
44 Ga0105247_10004764 3300009101 Bacteria 8638
45 Ga0114129_10013914 3300009147 Bacteria 11462
46 Ga0114129_10046073 3300009147 Bacteria 6129
47 Ga0105248_10000028 3300009177 Bacteria 225683
48 Ga0105248_10003643 3300009177 Bacteria 17106
49 Ga0105248_10056868 3300009177 Bacteria 4389
50 Ga0105248_10073701 3300009177 Bacteria 3837
51 Ga0105239_10009854 3300010375 Bacteria 10733
52 Ga0163163_10008458 3300014325 Bacteria 9144
53 Ga0157379_10000289 3300014968 Bacteria 39807
54 Ga0157376_10010760 3300014969 Bacteria 6712
55 Ga0213875_10000758 3300021388 Bacteria 24340
56 Ga0213875_10000907 3300021388 Bacteria 21486
57 Ga0207710_10000058 3300025900 Bacteria 172242
58 Ga0207710_10000249 3300025900 Bacteria 45249
59 Ga0207647_10001288 3300025904 Bacteria 19277
60 Ga0207643_10007859 3300025908 Bacteria 5725
61 Ga0207707_10009170 3300025912 Bacteria 8595
62 Ga0207695_10002634 3300025913 Bacteria 26254
63 Ga0207695_10018265 3300025913 Bacteria 8115
64 Ga0207671_10000313 3300025914 Bacteria 71480
65 Ga0207657_10007797 3300025919 Bacteria 10928
66 Ga0207646_10035136 3300025922 Bacteria 4528
67 Ga0207694_10002394 3300025924 Bacteria 15342
68 Ga0207659_10021728 3300025926 Bacteria 4266
69 Ga0207687_10016640 3300025927 Bacteria 4832
70 Ga0207700_10025355 3300025928 Bacteria 4115
71 Ga0207664_10002899 3300025929 Bacteria 11403
72 Ga0207664_10007294 3300025929 Bacteria 7667
73 Ga0207664_10014414 3300025929 Bacteria 5707
74 Ga0207664_10018089 3300025929 Bacteria 5178
75 Ga0207711_10000132 3300025941 Bacteria 78834
76 Ga0207711_10007860 3300025941 Bacteria 8917
77 Ga0207689_10026595 3300025942 Bacteria 4847
78 Ga0207640_10009688 3300025981 Bacteria 5402
79 Ga0207703_10000025 3300026035 Bacteria 214692
80 Ga0207703_10023450 3300026035 Bacteria 4847
81 Ga0207678_10001648 3300026067 Bacteria 20470
82 Ga0207702_10032139 3300026078 Bacteria 4379
83 Ga0207641_10002567 3300026088 Bacteria 16705
84 Ga0207641_10033246 3300026088 Bacteria 4285
85 Ga0207648_10015217 3300026089 Bacteria 7078
86 Ga0207676_10002384 3300026095 Bacteria 13414
87 Ga0207674_10033611 3300026116 Bacteria 5367
88 Ga0207675_100025810 3300026118 Bacteria 5467
89 Ga0207683_10021327 3300026121 Bacteria 5544
90 Ga0207683_10023236 3300026121 Bacteria 5330
91 Ga0209813_10001918 3300027866 Bacteria 4688
92 Ga0268265_10000686 3300028380 Bacteria 33243
93 Ga0268264_10000775 3300028381 Bacteria 35258
94 Ga0265337_1000052 3300028556 Bacteria 52251
95 Ga0265326_10000784 3300028558 Bacteria 11757
96 Ga0265319_1000235 3300028563 Bacteria 41448
97 Ga0265334_10000374 3300028573 Bacteria 23952
98 Ga0265336_10000900 3300028666 Bacteria 15152
99 Ga0265338_10000986 3300028800 Bacteria 47980
100 Ga0265324_10000535 3300029957 Bacteria 26053
101 Ga0265332_10000225 3300031238 Bacteria 45458
102 Ga0265320_10000621 3300031240 Bacteria 27147
103 Ga0265340_10000525 3300031247 Bacteria 21125
104 Ga0265339_10003503 3300031249 Bacteria 10966
105 Ga0265327_10000041 3300031251 Bacteria 288506
106 Ga0307513_10002805 3300031456 Bacteria 23900
107 Ga0307508_10000208 3300031616 Bacteria 71079
108 Ga0316579_10000225 3300031691 Bacteria 17155
109 Ga0265314_10001593 3300031711 Bacteria 24946
110 Ga0265342_10001979 3300031712 Bacteria 18293
111 Ga0265342_10003335 3300031712 Bacteria 13254
112 Ga0307411_10004211 3300032005 Bacteria 6842
113 Ga0307507_10000019 3300033179 Bacteria 224026
114 Ga0373934_0004222 3300035086 Bacteria 5303
115 Ga0373944_0001689 3300035089 Bacteria 5587
116 Ga0373956_0005803 3300035119 Bacteria 4936
117 Ga0373943_0002016 3300035170 Bacteria 9202
118 Ga0316574_0011990 3300035398 Bacteria 4945
119 Ga0373927_0000281 3300035695 Bacteria 40043
120 Ga0373947_0000793 3300035725 Bacteria 19007
121 Ga0373925_0000010 3300037068 Bacteria 229059
122 Ga0373925_0004641 3300037068 Bacteria 10374
123 Ga0395899_0010163 3300037312 Bacteria 7216
124 Ga0395900_0021151 3300037418 Bacteria 6649
125 Ga0395900_0036756 3300037418 Bacteria 5048
126 Ga0395898_0010994 3300037466 Bacteria 9432
127 Ga0436364_0086889 3300037853 Bacteria 54583
128 Ga0436364_0185475 3300037853 Bacteria 22963
129 Ga0395901_0019215 3300038443 Bacteria 6985
130 Ga0400485_07379 3300038735 Bacteria 16990
131 Ga0400488_50844 3300038741 Bacteria 8941
132 Ga0400486_04200 3300038742 Bacteria 58211
133 Ga0439446_0003413 3300042156 Bacteria 3941
134 Ga0466972_0010840 3300044658 Bacteria 4574
135 Ga0466965_0000015 3300044683 Bacteria 81629
136 Ga0466966_0015401 3300044684 Bacteria 5055
137 Ga0466961_0004112 3300044693 Bacteria 9084
138 Ga0453684_0021337 3300044712 Bacteria 9685
139 Ga0451576_0000407 3300045051 Bacteria 100082
140 Ga0451576_0000431 3300045051 Bacteria 96367
141 Ga0466958_0021082 3300045836 Bacteria 3804
142 Ga0466967_0005931 3300045976 Bacteria 8569
143 Ga0466967_0008395 3300045976 Bacteria 7560
144 Ga0495590_0000612 3300046457 Bacteria 16650
145 Ga0495651_0002083 3300046462 Bacteria 15406
146 Ga0495651_0032182 3300046462 Bacteria 4091
147 Ga0495582_0002734 3300046473 Bacteria 9854
148 Ga0495664_0000599 3300046477 Bacteria 18284
149 Ga0495664_0008286 3300046477 Bacteria 5794
150 Ga0495628_0016796 3300046516 Bacteria 6097
151 Ga0495628_0026595 3300046516 Bacteria 4714
152 Ga0495630_0001525 3300046517 Bacteria 16047
153 Ga0495665_0007752 3300046531 Bacteria 5807
154 Ga0495586_0008453 3300046535 Bacteria 5476
155 Ga0495586_0013268 3300046535 Bacteria 4368
156 Ga0495667_0004897 3300046559 Bacteria 9052
157 Ga0495634_0005158 3300046642 Bacteria 10089
158 Ga0495634_0006517 3300046642 Bacteria 8865
159 Ga0495657_0026493 3300046675 Bacteria 4105
160 Ga0495658_0001135 3300046683 Bacteria 14067
161 Ga0495613_0005476 3300046689 Bacteria 9535
162 Ga0495624_0002573 3300046690 Bacteria 13711
163 Ga0495600_0012930 3300046809 Bacteria 5231
164 Ga0495581_0000621 3300047315 Bacteria 18604
165 Ga0495674_0032413 3300047319 Bacteria 4739
166 Ga0495672_0008143 3300047320 Bacteria 7783
167 Ga0495676_0001791 3300047321 Bacteria 18771
168 Ga0495675_0007718 3300047444 Bacteria 6635
169 Ga0495684_0001960 3300047471 Bacteria 16540
170 Ga0495684_0006044 3300047471 Bacteria 9412
171 Ga0495684_0030355 3300047471 Bacteria 4150
172 Ga0496104_0011621 3300048907 Bacteria 7891
173 Ga0496104_0012036 3300048907 Bacteria 7764
174 Ga0496105_0001173 3300048908 Bacteria 18253
175 Ga0496105_0023812 3300048908 Bacteria 4971
176 Ga0496106_0023881 3300048909 Bacteria 4544
177 Ga0496107_0008007 3300048910 Bacteria 7296
178 Ga0496107_0016014 3300048910 Bacteria 5260
179 Ga0496108_0003513 3300048911 Bacteria 12562
180 Ga0496108_0018811 3300048911 Bacteria 5662
181 Ga0496109_0028083 3300048912 Bacteria 5030
182 Ga0496110_0011513 3300048913 Bacteria 7243
183 Ga0496110_0015488 3300048913 Bacteria 6347
184 Ga0496110_0018830 3300048913 Bacteria 5799
185 Ga0496111_0006784 3300048914 Bacteria 7462
186 Ga0496111_0014885 3300048914 Bacteria 5324
187 Ga0496113_0001517 3300048916 Bacteria 12995
188 Ga0496114_0030222 3300048917 Bacteria 4456
189 Ga0496115_0001816 3300048918 Bacteria 15268
190 Ga0496116_0004646 3300048919 Bacteria 13001
191 Ga0496117_0000232 3300048920 Bacteria 105479
192 Ga0496117_0005009 3300048920 Bacteria 14209
193 Ga0496117_0005780 3300048920 Bacteria 12846
194 Ga0496117_0005873 3300048920 Bacteria 12688
195 Ga0496117_0020476 3300048920 Bacteria 5390
196 Ga0496118_0006306 3300048921 Bacteria 13109
197 Ga0496118_0011514 3300048921 Bacteria 8622
198 Ga0496119_0000376 3300048922 Bacteria 61702
199 Ga0496119_0004923 3300048922 Bacteria 13066
200 Ga0496119_0005882 3300048922 Bacteria 11571
201 Ga0496119_0007372 3300048922 Bacteria 9930
202 Ga0496120_0000465 3300048923 Bacteria 63542
203 Ga0496120_0001016 3300048923 Bacteria 37526
204 Ga0496120_0001794 3300048923 Bacteria 24093
205 Ga0496120_0001809 3300048923 Bacteria 23936
206 Ga0496121_0000040 3300048924 Bacteria 348494
207 Ga0496121_0008979 3300048924 Bacteria 11593
208 Ga0496121_0025816 3300048924 Bacteria 5559
209 Ga0496121_0029843 3300048924 Bacteria 5026
210 Ga0496122_0000911 3300048925 Bacteria 54375
211 Ga0496123_0001799 3300048926 Bacteria 28218
212 Ga0496124_0000439 3300048927 Bacteria 73567
213 Ga0496125_0001197 3300048928 Bacteria 39065
214 Ga0496125_0011839 3300048928 Bacteria 8690
215 Ga0496126_0001194 3300048929 Bacteria 42334
216 Ga0501031_0014391 3300049568 Bacteria 5144
217 Ga0501033_0008150 3300049570 Bacteria 8114
218 Ga0501034_0006125 3300049571 Bacteria 12977
219 Ga0501034_0019134 3300049571 Bacteria 7012
220 Ga0501034_0030259 3300049571 Bacteria 5503
221 Ga0501046_0002489 3300049580 Bacteria 17261
222 Ga0501047_0000018 3300049581 Bacteria 274180
223 Ga0501047_0000983 3300049581 Bacteria 28745
224 Ga0501047_0018681 3300049581 Bacteria 6648
225 Ga0501067_0004893 3300049583 Bacteria 7439
226 Ga0501067_0021599 3300049583 Bacteria 3562
227 Ga0501070_0009304 3300049586 Bacteria 8310
228 Ga0501070_0018847 3300049586 Bacteria 5790
229 Ga0501071_0001502 3300049587 Bacteria 13562
230 Ga0501072_0008106 3300049588 Bacteria 7970
231 Ga0501073_0018842 3300049589 Bacteria 4987
232 Ga0501080_0014071 3300049742 Bacteria 7364
233 Ga0501083_0000027 3300049744 Bacteria 117605
234 Ga0501083_0009395 3300049744 Bacteria 6905
235 Ga0501035_0005154 3300049822 Bacteria 12360
236 Ga0501044_0007827 3300049823 Bacteria 11745
237 nmdc:mga03n38_182_c1 3300050490 Bacteria 14160
238 nmdc:mga00v17_19038_c1 3300050491 Bacteria 3912
239 nmdc:mga0yw44_1074_c1 3300050492 Bacteria 10497
240 nmdc:mga04h51_1870_c1 3300050495 Bacteria 4919
241 nmdc:mga07m45_5118_c1 3300050496 Bacteria 6496
242 nmdc:mga05p37_35173_c1 3300050507 Bacteria 6141
243 nmdc:mga05p37_452_c1 3300050507 Bacteria 44614
244 nmdc:mga0qj67_889_c1 3300050509 Bacteria 20494
245 Ga0500644_0000009 3300053088 Bacteria 127269
246 Ga0500646_0000327 3300053090 Bacteria 14384
247 Ga0500556_0000398 3300053104 Bacteria 31768
248 Ga0500593_000107 3300053117 Bacteria 32113
249 Ga0500559_0011190 3300053136 Bacteria 3836
250 Ga0500568_0001189 3300053139 Bacteria 17400
251 Ga0500568_0004426 3300053139 Bacteria 7508
252 Ga0500616_0000781 3300053153 Bacteria 36581
253 Ga0500616_0004858 3300053153 Bacteria 9374
254 Ga0501082_0036760 3300060353 Bacteria 4218

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0019134 Ga0501034_0019134_3931_6984 1004
2 3300049583 Ga0501067_0021599 Ga0501067_0021599_339_3545 1017
3 iso_pu_bacteria 2523231044 2523386857 1018
4 3300035086 Ga0373934_0004222 Ga0373934_0004222_11_3160 1030
5 3300046516 Ga0495628_0026595 Ga0495628_0026595_20_3187 1032
6 3300050491 nmdc:mga00v17_19038_c1 nmdc:mga00v17_19038_c1_565_3897 1060
7 3300048920 Ga0496117_0005009 Ga0496117_0005009_10961_14185 1062
8 3300045051 Ga0451576_0000407 Ga0451576_0000407_30705_34211 1067
9 3300006042 Ga0075368_10005900 Ga0075368_100059002 1090
10 3300031712 Ga0265342_10001979 Ga0265342_1000197916 1096
11 3300045051 Ga0451576_0000431 Ga0451576_0000431_17092_20604 1105
12 3300044712 Ga0453684_0021337 Ga0453684_0021337_2745_6254 1112
13 3300049581 Ga0501047_0000018 Ga0501047_0000018_190795_194346 1127
14 3300048922 Ga0496119_0000376 Ga0496119_0000376_16995_20579 1130
15 3300005843 Ga0068860_100001854 Ga0068860_10000185413 1131
16 3300006048 Ga0075363_100002681 Ga0075363_1000026815 1131
17 3300028381 Ga0268264_10000775 Ga0268264_1000077535 1131
18 3300048923 Ga0496120_0000465 Ga0496120_0000465_18834_22418 1131
19 3300048909 Ga0496106_0023881 Ga0496106_0023881_590_4177 1132
20 3300048924 Ga0496121_0029843 Ga0496121_0029843_601_4188 1132
21 3300044693 Ga0466961_0004112 Ga0466961_0004112_5162_8683 1133
22 3300050490 nmdc:mga03n38_182_c1 nmdc:mga03n38_182_c1_9745_13236 1134
23 3300053088 Ga0500644_0000009 Ga0500644_0000009_32542_36033 1134
24 3300049588 Ga0501072_0008106 Ga0501072_0008106_269_3814 1136
25 iso_pu_bacteria 8055157932 8055160477 1136
26 3300049568 Ga0501031_0014391 Ga0501031_0014391_319_3888 1137
27 iso_pu_bacteria 2643221632 2644183649 1137
28 3300005458 Ga0070681_10037564 Ga0070681_100375641 1138
29 3300025912 Ga0207707_10009170 Ga0207707_100091707 1138
30 3300048920 Ga0496117_0005780 Ga0496117_0005780_4123_7653 1138
31 3300048925 Ga0496122_0000911 Ga0496122_0000911_13217_16747 1138
32 3300048920 Ga0496117_0000232 Ga0496117_0000232_42875_46339 1140
33 3300048923 Ga0496120_0001794 Ga0496120_0001794_14992_18456 1140
34 3300048923 Ga0496120_0001809 Ga0496120_0001809_5642_9106 1140
35 3300048926 Ga0496123_0001799 Ga0496123_0001799_10735_14199 1140
36 3300048928 Ga0496125_0011839 Ga0496125_0011839_1351_4815 1140
37 3300048929 Ga0496126_0001194 Ga0496126_0001194_29473_32937 1140
38 3300053153 Ga0500616_0000781 Ga0500616_0000781_26679_30203 1140
39 3300035398 Ga0316574_0011990 Ga0316574_0011990_198_3734 1141
40 3300053090 Ga0500646_0000327 Ga0500646_0000327_1507_5013 1141
41 3300006846 Ga0075430_100001967 Ga0075430_10000196714 1143
42 3300009147 Ga0114129_10046073 Ga0114129_100460733 1143
43 3300050509 nmdc:mga0qj67_889_c1 nmdc:mga0qj67_889_c1_11580_15077 1143
44 iso_pu_bacteria 2675903059 2676487032 1143
45 iso_pu_bacteria 2739367653 2739602141 1143
46 iso_pu_bacteria 2816332305 2817509380 1143
47 3300031616 Ga0307508_10000208 Ga0307508_1000020860 1144
48 3300044658 Ga0466972_0010840 Ga0466972_0010840_990_4463 1144
49 3300049580 Ga0501046_0002489 Ga0501046_0002489_5984_9457 1144
50 3300049581 Ga0501047_0018681 Ga0501047_0018681_375_3848 1144
51 iso_pu_bacteria 2795385472 2795798004 1145
52 3300037068 Ga0373925_0000010 Ga0373925_0000010_130789_134325 1146
53 3300045976 Ga0466967_0005931 Ga0466967_0005931_4816_8322 1146
54 3300037853 Ga0436364_0185475 Ga0436364_0185475_11937_15449 1147
55 iso_pu_bacteria 2527291627 2528205762 1147
56 iso_pu_bacteria 2546825537 2546951653 1147
57 3300005548 Ga0070665_100019325 Ga0070665_1000193255 1148
58 3300005563 Ga0068855_100007872 Ga0068855_1000078728 1148
59 3300005616 Ga0068852_100003890 Ga0068852_1000038908 1148
60 3300005842 Ga0068858_100000073 Ga0068858_10000007375 1148
61 3300025900 Ga0207710_10000249 Ga0207710_100002493 1148
62 3300025904 Ga0207647_10001288 Ga0207647_100012889 1148
63 3300025913 Ga0207695_10002634 Ga0207695_100026346 1148
64 3300025914 Ga0207671_10000313 Ga0207671_1000031323 1148
65 3300025924 Ga0207694_10002394 Ga0207694_100023949 1148
66 3300025981 Ga0207640_10009688 Ga0207640_100096883 1148
67 3300026035 Ga0207703_10000025 Ga0207703_10000025172 1148
68 3300048924 Ga0496121_0008979 Ga0496121_0008979_4431_7976 1148
69 iso_pu_bacteria 2508501039 2508675631 1148
70 iso_pu_bacteria 2687453737 2689962592 1148
71 iso_pu_bacteria 8002775197 8002778305 1148
72 3300037312 Ga0395899_0010163 Ga0395899_0010163_3361_6846 1149
73 3300037418 Ga0395900_0036756 Ga0395900_0036756_206_3691 1149
74 3300037466 Ga0395898_0010994 Ga0395898_0010994_2824_6309 1149
75 3300053153 Ga0500616_0004858 Ga0500616_0004858_508_4095 1149
76 iso_pu_bacteria 2915768154 2915775498 1149
77 3300006237 Ga0097621_100027179 Ga0097621_1000271793 1150
78 3300009177 Ga0105248_10056868 Ga0105248_100568682 1150
79 3300014969 Ga0157376_10010760 Ga0157376_100107604 1150
80 3300025929 Ga0207664_10018089 Ga0207664_100180893 1150
81 3300048912 Ga0496109_0028083 Ga0496109_0028083_971_4528 1150
82 3300048913 Ga0496110_0015488 Ga0496110_0015488_1794_5351 1150
83 iso_pu_bacteria 2808606522 2809592487 1150
84 3300027866 Ga0209813_10001918 Ga0209813_100019183 1151
85 3300045976 Ga0466967_0008395 Ga0466967_0008395_2445_5933 1151
86 3300047320 Ga0495672_0008143 Ga0495672_0008143_2987_6478 1151
87 3300050495 nmdc:mga04h51_1870_c1 nmdc:mga04h51_1870_c1_571_4116 1151
88 3300009177 Ga0105248_10000028 Ga0105248_1000002866 1152
89 3300025941 Ga0207711_10000132 Ga0207711_1000013214 1152
90 3300048920 Ga0496117_0020476 Ga0496117_0020476_1290_4811 1152
91 3300048921 Ga0496118_0011514 Ga0496118_0011514_490_4011 1152
92 3300049583 Ga0501067_0004893 Ga0501067_0004893_3250_6741 1152
93 3300049744 Ga0501083_0009395 Ga0501083_0009395_866_4357 1152
94 3300050496 nmdc:mga07m45_5118_c1 nmdc:mga07m45_5118_c1_744_4289 1152
95 3300060353 Ga0501082_0036760 Ga0501082_0036760_372_3863 1152
96 iso_pu_bacteria 2579778521 2579853497 1152
97 iso_pu_bacteria 2619618881 2619858017 1152
98 iso_pu_bacteria 2619619003 2620349071 1152
99 iso_pu_bacteria 2626541554 2626637101 1152
100 iso_pu_bacteria 2757320536 2758227242 1152
101 iso_pu_bacteria 2974324384 2974326047 1152
102 iso_pu_bacteria 2977264416 2977266246 1152
103 iso_pu_bacteria 8016254467 8016257891 1152
104 iso_pu_bacteria 8054913762 8054919038 1152
105 iso_pu_bacteria 8054920844 8054925308 1152
106 3300042156 Ga0439446_0003413 Ga0439446_0003413_159_3662 1153
107 iso_pu_bacteria 2517572101 2517763972 1153
108 iso_pu_bacteria 2527291629 2528215667 1153
109 iso_pu_bacteria 2546825537 2546951659 1153
110 iso_pu_bacteria 2576861822 2579750707 1153
111 iso_pu_bacteria 2671180195 2671838123 1153
112 iso_pu_bacteria 2684623035 2686540109 1153
113 iso_pu_bacteria 2687453743 2689993116 1153
114 iso_pu_bacteria 2710264753 2710605843 1153
115 iso_pu_bacteria 2773857922 2774856279 1153
116 iso_pu_bacteria 2895880812 2895886893 1153
117 iso_pu_bacteria 2895880812 2895889269 1153
118 iso_pu_bacteria 637000116 637881410 1153
119 iso_pu_bacteria 637000116 637881496 1153
120 iso_pu_bacteria 8002784119 8002785598 1153
121 iso_pu_bacteria 8002784119 8002789870 1153
122 3300032005 Ga0307411_10004211 Ga0307411_100042112 1154
123 3300049744 Ga0501083_0000027 Ga0501083_0000027_88618_92148 1154
124 iso_pu_bacteria 2675902999 2676199942 1154
125 iso_pu_bacteria 2773857921 2774844520 1154
126 iso_pu_bacteria 8002811521 8002812846 1154
127 iso_pu_bacteria 2506783011 2506867919 1155
128 iso_pu_bacteria 2671180195 2671833024 1155
129 iso_pu_bacteria 2773857922 2774851180 1155
130 iso_pu_bacteria 2773857933 2774904342 1155
131 iso_pu_bacteria 2852677369 2852679501 1155
132 iso_pu_bacteria 2884693830 2884703753 1155
133 iso_pu_bacteria 2895442618 2895447244 1155
134 iso_pu_bacteria 8046352972 8046356189 1155
135 iso_pu_bacteria 2751185782 2753268283 1156
136 iso_pu_bacteria 2808606372 2808902371 1156
137 iso_pu_bacteria 2857733635 2857735504 1156
138 iso_pu_bacteria 2919443155 2919445923 1156
139 iso_pu_bacteria 2996221748 2996227868 1156
140 3300005617 Ga0068859_100013211 Ga0068859_1000132113 1157
141 3300005618 Ga0068864_100019227 Ga0068864_1000192272 1157
142 3300005841 Ga0068863_100000217 Ga0068863_10000021726 1157
143 3300005842 Ga0068858_100004962 Ga0068858_1000049621 1157
144 3300006931 Ga0097620_100013211 Ga0097620_1000132113 1157
145 3300014325 Ga0163163_10008458 Ga0163163_100084586 1157
146 3300026035 Ga0207703_10023450 Ga0207703_100234502 1157
147 3300026088 Ga0207641_10002567 Ga0207641_100025672 1157
148 3300026088 Ga0207641_10033246 Ga0207641_100332462 1157
149 3300026095 Ga0207676_10002384 Ga0207676_100023846 1157
150 3300048907 Ga0496104_0011621 Ga0496104_0011621_362_3898 1157
151 3300048908 Ga0496105_0023812 Ga0496105_0023812_1039_4575 1157
152 3300048911 Ga0496108_0003513 Ga0496108_0003513_4364_8536 1157
153 3300048913 Ga0496110_0011513 Ga0496110_0011513_2563_6099 1157
154 3300048916 Ga0496113_0001517 Ga0496113_0001517_213_3749 1157
155 3300048919 Ga0496116_0004646 Ga0496116_0004646_141_3677 1157
156 3300048920 Ga0496117_0005873 Ga0496117_0005873_8910_12446 1157
157 3300048921 Ga0496118_0006306 Ga0496118_0006306_9340_12876 1157
158 3300048922 Ga0496119_0004923 Ga0496119_0004923_9314_12850 1157
159 3300048924 Ga0496121_0025816 Ga0496121_0025816_1750_5286 1157
160 3300049571 Ga0501034_0006125 Ga0501034_0006125_8017_11532 1157
161 3300049586 Ga0501070_0018847 Ga0501070_0018847_1668_5234 1157
162 3300049587 Ga0501071_0001502 Ga0501071_0001502_1703_5218 1157
163 iso_pu_bacteria 2772190715 2772643530 1157
164 iso_pu_bacteria 2852643534 2852645338 1157
165 iso_pu_bacteria 2855670206 2855674799 1157
166 iso_pu_bacteria 2855676851 2855680498 1157
167 iso_pu_bacteria 2857288857 2857292683 1157
168 iso_pu_bacteria 2858848962 2858851252 1157
169 iso_pu_bacteria 2858868258 2858871045 1157
170 iso_pu_bacteria 2858882152 2858884208 1157
171 iso_pu_bacteria 2858888857 2858890855 1157
172 iso_pu_bacteria 2858895516 2858899471 1157
173 iso_pu_bacteria 2869048445 2869054835 1157
174 iso_pu_bacteria 2869068681 2869073324 1157
175 iso_pu_bacteria 2880495981 2880500124 1157
176 iso_pu_bacteria 2902582711 2902586772 1157
177 iso_pu_bacteria 2929219909 2929222022 1157
178 iso_pu_bacteria 2929226422 2929228682 1157
179 iso_pu_bacteria 8054704163 8054707642 1157
180 iso_pu_bacteria 8054727385 8054730415 1157
181 iso_pu_bacteria 8054734606 8054739593 1157
182 3300005985 Ga0081539_10022946 Ga0081539_100229461 1158
183 3300009101 Ga0105247_10000042 Ga0105247_1000004273 1158
184 3300009177 Ga0105248_10003643 Ga0105248_100036432 1158
185 3300046457 Ga0495590_0000612 Ga0495590_0000612_11707_15219 1158
186 3300048922 Ga0496119_0005882 Ga0496119_0005882_3957_7520 1158
187 3300048922 Ga0496119_0007372 Ga0496119_0007372_5202_8711 1158
188 3300048923 Ga0496120_0001016 Ga0496120_0001016_3931_7494 1158
189 3300049570 Ga0501033_0008150 Ga0501033_0008150_3511_7038 1158
190 3300049571 Ga0501034_0030259 Ga0501034_0030259_1787_5299 1158
191 3300049581 Ga0501047_0000983 Ga0501047_0000983_6716_10228 1158
192 3300049822 Ga0501035_0005154 Ga0501035_0005154_1156_4668 1158
193 3300049823 Ga0501044_0007827 Ga0501044_0007827_8126_11638 1158
194 3300053136 Ga0500559_0011190 Ga0500559_0011190_226_3747 1158
195 3300053139 Ga0500568_0001189 Ga0500568_0001189_2206_5718 1158
196 3300053139 Ga0500568_0004426 Ga0500568_0004426_3415_6927 1158
197 iso_pu_bacteria 2811994880 2812365450 1158
198 3300005617 Ga0068859_100000072 Ga0068859_10000007232 1159
199 3300005844 Ga0068862_100002576 Ga0068862_10000257614 1159
200 3300006931 Ga0097620_100000072 Ga0097620_10000007254 1159
201 3300025908 Ga0207643_10007859 Ga0207643_100078593 1159
202 3300026089 Ga0207648_10015217 Ga0207648_100152173 1159
203 3300026121 Ga0207683_10023236 Ga0207683_100232363 1159
204 3300028380 Ga0268265_10000686 Ga0268265_100006861 1159
205 3300044684 Ga0466966_0015401 Ga0466966_0015401_1526_5044 1159
206 3300047444 Ga0495675_0007718 Ga0495675_0007718_2309_5842 1159
207 3300048924 Ga0496121_0000040 Ga0496121_0000040_62736_66248 1159
208 iso_pu_bacteria 2751185725 2753038624 1159
209 iso_pu_bacteria 2751185792 2753327136 1159
210 3300006844 Ga0075428_100000182 Ga0075428_10000018218 1160
211 3300025926 Ga0207659_10021728 Ga0207659_100217282 1160
212 iso_pu_bacteria 8054913762 8054917854 1160
213 iso_pu_bacteria 8055037949 8055038697 1160
214 3300009147 Ga0114129_10013914 Ga0114129_100139143 1161
215 3300050507 nmdc:mga05p37_452_c1 nmdc:mga05p37_452_c1_13119_16646 1161
216 iso_pu_bacteria 2751185788 2753301643 1161
217 iso_pu_bacteria 2751185788 2753301665 1161
218 iso_pu_bacteria 2904430863 2904433173 1161
219 iso_pu_bacteria 2904501621 2904502705 1161
220 iso_pu_bacteria 2908674828 2908677612 1161
221 iso_pu_bacteria 2909074476 2909075185 1161
222 iso_pu_bacteria 2919039151 2919040598 1161
223 iso_pu_bacteria 2919042368 2919043616 1161
224 iso_pu_bacteria 2928104781 2928108270 1161
225 iso_pu_bacteria 2928500415 2928501578 1161
226 iso_pu_bacteria 2984551494 2984553834 1161
227 iso_pu_bacteria 2995726249 2995728232 1161
228 3300005435 Ga0070714_100001824 Ga0070714_1000018245 1162
229 3300025929 Ga0207664_10007294 Ga0207664_100072942 1162
230 3300028556 Ga0265337_1000052 Ga0265337_10000525 1162
231 3300028558 Ga0265326_10000784 Ga0265326_100007843 1162
232 3300028563 Ga0265319_1000235 Ga0265319_100023529 1162
233 3300028573 Ga0265334_10000374 Ga0265334_1000037413 1162
234 3300028666 Ga0265336_10000900 Ga0265336_1000090011 1162
235 3300028800 Ga0265338_10000986 Ga0265338_1000098616 1162
236 3300029957 Ga0265324_10000535 Ga0265324_100005355 1162
237 3300031238 Ga0265332_10000225 Ga0265332_1000022532 1162
238 3300031240 Ga0265320_10000621 Ga0265320_1000062115 1162
239 3300031247 Ga0265340_10000525 Ga0265340_100005254 1162
240 3300031249 Ga0265339_10003503 Ga0265339_100035037 1162
241 3300031456 Ga0307513_10002805 Ga0307513_100028059 1162
242 3300031711 Ga0265314_10001593 Ga0265314_1000159320 1162
243 3300031712 Ga0265342_10003335 Ga0265342_100033353 1162
244 3300050507 nmdc:mga05p37_35173_c1 nmdc:mga05p37_35173_c1_529_4083 1162
245 iso_pu_bacteria 2728369276 2729906130 1162
246 iso_pu_bacteria 2839986021 2839989482 1162
247 3300005435 Ga0070714_100006524 Ga0070714_1000065246 1163
248 3300021388 Ga0213875_10000758 Ga0213875_100007586 1163
249 3300025929 Ga0207664_10002899 Ga0207664_100028997 1163
250 3300037853 Ga0436364_0086889 Ga0436364_0086889_37472_41041 1163
251 3300038741 Ga0400488_50844 Ga0400488_50844_146_3670 1163
252 3300044683 Ga0466965_0000015 Ga0466965_0000015_77921_81466 1163
253 3300046462 Ga0495651_0002083 Ga0495651_0002083_8909_12478 1163
254 3300046809 Ga0495600_0012930 Ga0495600_0012930_1297_4866 1163
255 3300047319 Ga0495674_0032413 Ga0495674_0032413_58_3672 1163
256 iso_pu_bacteria 2643221690 2644506470 1163
257 iso_pu_bacteria 2643221694 2644526612 1163
258 iso_pu_bacteria 2643221722 2644671278 1163
259 iso_pu_bacteria 2857727296 2857728656 1163
260 3300005343 Ga0070687_100009900 Ga0070687_1000099002 1164
261 3300005364 Ga0070673_100019102 Ga0070673_1000191022 1164
262 3300005439 Ga0070711_100011683 Ga0070711_1000116833 1164
263 3300005445 Ga0070708_100022059 Ga0070708_1000220592 1164
264 3300005457 Ga0070662_100029075 Ga0070662_1000290752 1164
265 3300005467 Ga0070706_100043476 Ga0070706_1000434762 1164
266 3300005471 Ga0070698_100000192 Ga0070698_10000019219 1164
267 3300005518 Ga0070699_100001377 Ga0070699_10000137723 1164
268 3300005544 Ga0070686_100014401 Ga0070686_1000144012 1164
269 3300005843 Ga0068860_100036594 Ga0068860_1000365942 1164
270 3300005983 Ga0081540_1000322 Ga0081540_10003223 1164
271 3300009177 Ga0105248_10073701 Ga0105248_100737012 1164
272 3300025919 Ga0207657_10007797 Ga0207657_100077972 1164
273 3300025922 Ga0207646_10035136 Ga0207646_100351362 1164
274 3300025927 Ga0207687_10016640 Ga0207687_100166401 1164
275 3300025928 Ga0207700_10025355 Ga0207700_100253552 1164
276 3300025929 Ga0207664_10014414 Ga0207664_100144143 1164
277 3300025942 Ga0207689_10026595 Ga0207689_100265952 1164
278 3300026067 Ga0207678_10001648 Ga0207678_100016482 1164
279 3300026078 Ga0207702_10032139 Ga0207702_100321392 1164
280 3300026116 Ga0207674_10033611 Ga0207674_100336112 1164
281 3300026118 Ga0207675_100025810 Ga0207675_1000258102 1164
282 3300026121 Ga0207683_10021327 Ga0207683_100213273 1164
283 3300031251 Ga0265327_10000041 Ga0265327_10000041145 1164
284 3300035089 Ga0373944_0001689 Ga0373944_0001689_1451_5026 1164
285 3300035119 Ga0373956_0005803 Ga0373956_0005803_1116_4673 1164
286 3300035170 Ga0373943_0002016 Ga0373943_0002016_299_3856 1164
287 3300035695 Ga0373927_0000281 Ga0373927_0000281_20110_23685 1164
288 3300035725 Ga0373947_0000793 Ga0373947_0000793_8190_11765 1164
289 3300037068 Ga0373925_0004641 Ga0373925_0004641_6543_10118 1164
290 3300046462 Ga0495651_0032182 Ga0495651_0032182_125_3682 1164
291 3300046473 Ga0495582_0002734 Ga0495582_0002734_329_3886 1164
292 3300046477 Ga0495664_0000599 Ga0495664_0000599_79_3654 1164
293 3300046477 Ga0495664_0008286 Ga0495664_0008286_294_3851 1164
294 3300046516 Ga0495628_0016796 Ga0495628_0016796_2399_5956 1164
295 3300046517 Ga0495630_0001525 Ga0495630_0001525_308_3865 1164
296 3300046531 Ga0495665_0007752 Ga0495665_0007752_1944_5501 1164
297 3300046535 Ga0495586_0008453 Ga0495586_0008453_368_3925 1164
298 3300046559 Ga0495667_0004897 Ga0495667_0004897_4881_8441 1164
299 3300046642 Ga0495634_0006517 Ga0495634_0006517_2428_6003 1164
300 3300046675 Ga0495657_0026493 Ga0495657_0026493_190_3750 1164
301 3300046683 Ga0495658_0001135 Ga0495658_0001135_548_4105 1164
302 3300046689 Ga0495613_0005476 Ga0495613_0005476_283_3840 1164
303 3300046690 Ga0495624_0002573 Ga0495624_0002573_9605_13180 1164
304 3300047315 Ga0495581_0000621 Ga0495581_0000621_14700_18257 1164
305 3300047321 Ga0495676_0001791 Ga0495676_0001791_5254_8829 1164
306 3300047471 Ga0495684_0001960 Ga0495684_0001960_10590_14165 1164
307 3300047471 Ga0495684_0006044 Ga0495684_0006044_5536_9093 1164
308 3300048914 Ga0496111_0014885 Ga0496111_0014885_1062_4619 1164
309 iso_pu_bacteria 2920879853 2920882423 1164
310 3300025900 Ga0207710_10000058 Ga0207710_1000005878 1165
311 3300025941 Ga0207711_10007860 Ga0207711_100078602 1165
312 3300033179 Ga0307507_10000019 Ga0307507_1000001979 1165
313 3300048927 Ga0496124_0000439 Ga0496124_0000439_56418_59951 1165
314 iso_pu_bacteria 2537561592 2537899549 1165
315 iso_pu_bacteria 2643221615 2644089574 1166
316 iso_pu_bacteria 2643221657 2644319419 1166
317 3300006038 Ga0075365_10013642 Ga0075365_100136422 1167
318 3300021388 Ga0213875_10000907 Ga0213875_1000090719 1167
319 3300048928 Ga0496125_0001197 Ga0496125_0001197_14700_18281 1167
320 iso_pu_bacteria 2855386786 2855387813 1167
321 iso_pu_bacteria 2857481737 2857485871 1167
322 3300005434 Ga0070709_10006198 Ga0070709_100061981 1168
323 3300005471 Ga0070698_100001213 Ga0070698_10000121316 1168
324 3300005985 Ga0081539_10004512 Ga0081539_1000451213 1168
325 3300031691 Ga0316579_10000225 Ga0316579_100002255 1168
326 3300046535 Ga0495586_0013268 Ga0495586_0013268_72_3686 1168
327 3300046642 Ga0495634_0005158 Ga0495634_0005158_6430_10044 1168
328 3300047471 Ga0495684_0030355 Ga0495684_0030355_328_3942 1168
329 3300009101 Ga0105247_10004764 Ga0105247_100047643 1169
330 3300014968 Ga0157379_10000289 Ga0157379_1000028927 1169
331 3300053117 Ga0500593_000107 Ga0500593_000107_3525_7103 1169
332 3300038735 Ga0400485_07379 Ga0400485_07379_5064_8609 1170
333 3300038742 Ga0400486_04200 Ga0400486_04200_22140_25685 1170
334 3300048907 Ga0496104_0012036 Ga0496104_0012036_333_3875 1171
335 3300048908 Ga0496105_0001173 Ga0496105_0001173_3240_6782 1171
336 3300048910 Ga0496107_0008007 Ga0496107_0008007_3181_6723 1171
337 3300048910 Ga0496107_0016014 Ga0496107_0016014_1385_4927 1171
338 3300048917 Ga0496114_0030222 Ga0496114_0030222_602_4144 1171
339 3300048918 Ga0496115_0001816 Ga0496115_0001816_10520_14062 1171
340 3300005327 Ga0070658_10019461 Ga0070658_100194614 1172
341 3300005530 Ga0070679_100006418 Ga0070679_1000064183 1172
342 3300006038 Ga0075365_10000582 Ga0075365_100005822 1172
343 3300009098 Ga0105245_10001461 Ga0105245_1000146115 1172
344 3300010375 Ga0105239_10009854 Ga0105239_100098546 1172
345 3300048911 Ga0496108_0018811 Ga0496108_0018811_2031_5585 1172
346 3300048913 Ga0496110_0018830 Ga0496110_0018830_1423_4977 1172
347 3300048914 Ga0496111_0006784 Ga0496111_0006784_1571_5125 1172
348 3300053104 Ga0500556_0000398 Ga0500556_0000398_745_4308 1172
349 3300037418 Ga0395900_0021151 Ga0395900_0021151_139_3681 1174
350 3300038443 Ga0395901_0019215 Ga0395901_0019215_2438_5980 1174
351 3300045836 Ga0466958_0021082 Ga0466958_0021082_33_3575 1174
352 3300050492 nmdc:mga0yw44_1074_c1 nmdc:mga0yw44_1074_c1_6367_9951 1174
353 3300049586 Ga0501070_0009304 Ga0501070_0009304_4532_8116 1175
354 3300049589 Ga0501073_0018842 Ga0501073_0018842_1110_4694 1175
355 3300049742 Ga0501080_0014071 Ga0501080_0014071_82_3666 1175
356 3300025913 Ga0207695_10018265 Ga0207695_100182654 1181
357 3300002067 JGI24735J21928_10004438 JGI24735J21928_100044382 1183

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17657

DNA_pol3_finger

Bacterial DNA polymerase III alpha subunit finger domain

585

754

0.99

PF14579

HHH_6

Helix-hairpin-helix motif

827

916

0.98

PF02811

PHP

PHP domain

8

193

0.97

PF07733

DNA_pol3_alpha

Bacterial DNA polymerase III alpha NTPase domain

314

582

0.96

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

1017

1094

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lew-assembly1.cif.gz_A dna polymerase 0.9253 12 933
5lew-assembly1.cif.gz_A dna polymerase 0.9234 12 933
4gx9-assembly4.cif.gz_D crystal structure of a dna polymerase iii alpha-epsilon chimera 0.914 8 300
4gx8-assembly1.cif.gz_A crystal structure of a dna polymerase iii alpha-epsilon chimera 0.9114 14 300
4gx9-assembly2.cif.gz_B crystal structure of a dna polymerase iii alpha-epsilon chimera 0.9056 14 300
ID Description Score Start End Superfamily
af_P9WNT7_736_912_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9864 737 912 1.10.150.870
af_P9WNT7_7_294_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9787 12 298 3.20.20.140
af_P9WNT7_736_912_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9754 737 912 1.10.150.870
af_P9WNT7_7_294_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.972 12 298 3.20.20.140
4iqjC01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9664 13 300 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A354SFV0-F1-model_v4 DNA polymerase III subunit alpha 0.9974 14 205 GO:0006260
GO:0008408
AF-A0A0G1JQH8-F1-model_v4 Polymerase III, alpha subunit protein 0.9854 13 186 GO:0006260
GO:0008408
AF-A0A7K2NU03-F1-model_v4 DNA polymerase III subunit alpha 0.9842 679 824 GO:0006260
GO:0008408
AF-A0A7G3D7R9-F1-model_v4 deleted 0.9833 83 247
AF-W1Y583-F1-model_v4 DNA polymerase III, alpha subunit 0.9821 119 246 GO:0006260
GO:0008408

Feature Viewer

pLDDT pTM Quality
86.1 0.75 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map