F419294

General Info

Members Datasets Scaffolds Average Seq Length
353 180 706 134

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100032487|Ga0070714_1000324877
Length 138
Sequence MSMTDPVADFLTRLRNGAKAQHHDVVIPSSKLKRELARILKEQGYIDAYQVVAPGEGQNTTPNEQITVTLKYTEDRKPVISGIQRVSRPGQRTYVDHAHIPRIQGGMGTAIISTSKGVMTGHEARQQGVGGEVVARVW

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
24 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
44 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
69 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
70 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
82 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
89 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
90 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
91 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
92 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
93 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
94 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
95 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
101 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
102 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
103 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
104 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
110 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
111 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
119 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
120 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
121 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
122 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
126 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
127 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
128 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
129 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
130 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
131 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
132 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
133 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
134 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
135 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
138 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
141 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
142 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
143 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
144 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
145 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
146 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
159 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
160 3300049547 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_A_5_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
161 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
163 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
164 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
165 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
171 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
172 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
173 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
174 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
175 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
176 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
177 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
178 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
179 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.45
Metatranscriptomes 2.55
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.57
Nodule 0
Rhizoplane 6.23
Rhizosphere 75.64
Stem 0
Stem Tuber 0
Unclassified 1.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100032487 3300005435 Bacteria 4356
2 Ga0058862_12277685 3300004803 Bacteria 805
3 Ga0070683_100057365 3300005329 Bacteria 3617
4 Ga0070683_100919012 3300005329 Bacteria 840
5 Ga0070680_101659898 3300005336 Bacteria 554
6 Ga0068868_102102222 3300005338 Bacteria 537
7 Ga0070660_100594666 3300005339 Bacteria 925
8 Ga0070691_10363603 3300005341 Bacteria 807
9 Ga0070669_100067688 3300005353 Bacteria 2635
10 Ga0070659_100000160 3300005366 Bacteria 51528
11 Ga0070709_10149091 3300005434 Bacteria 1615
12 Ga0070709_10274511 3300005434 Bacteria 1223
13 Ga0070709_10566850 3300005434 Bacteria 871
14 Ga0070714_100002996 3300005435 Bacteria 12517
15 Ga0070714_100061936 3300005435 Bacteria 3214
16 Ga0070714_100112812 3300005435 Bacteria 2409
17 Ga0070714_100119506 3300005435 Bacteria 2342
18 Ga0070714_100163126 3300005435 Bacteria 2017
19 Ga0070714_100712794 3300005435 Bacteria 969
20 Ga0070714_100915050 3300005435 Bacteria 852
21 Ga0070714_101575417 3300005435 Bacteria 642
22 Ga0070713_100076472 3300005436 Bacteria 2843
23 Ga0070713_100215175 3300005436 Bacteria 1741
24 Ga0070713_100587753 3300005436 Bacteria 1057
25 Ga0070713_100938923 3300005436 Bacteria 833
26 Ga0070710_10000005 3300005437 Bacteria 238049
27 Ga0070710_10007649 3300005437 Bacteria 5238
28 Ga0070710_10624131 3300005437 Bacteria 753
29 Ga0070711_100014201 3300005439 Bacteria 5014
30 Ga0070711_100755931 3300005439 Bacteria 822
31 Ga0070705_100002004 3300005440 Bacteria 10415
32 Ga0070699_101193470 3300005518 Bacteria 698
33 Ga0070679_102083049 3300005530 Bacteria 517
34 Ga0070704_100254503 3300005549 Bacteria 1444
35 Ga0070704_101267062 3300005549 Bacteria 674
36 Ga0070664_100039885 3300005564 Bacteria 3959
37 Ga0068856_100411058 3300005614 Bacteria 1373
38 Ga0068859_102244177 3300005617 Unclassified 602
39 Ga0068862_101834383 3300005844 Bacteria 616
40 Ga0070717_10000069 3300006028 Bacteria 86039
41 Ga0070717_10031367 3300006028 Bacteria 4275
42 Ga0070717_10150169 3300006028 Bacteria 2015
43 Ga0070717_10265485 3300006028 Bacteria 1519
44 Ga0070717_10443406 3300006028 Bacteria 1169
45 Ga0070717_10654395 3300006028 Bacteria 954
46 Ga0070717_10859329 3300006028 Bacteria 826
47 Ga0070717_11816356 3300006028 Bacteria 551
48 Ga0075368_10189970 3300006042 Bacteria 867
49 Ga0070715_10059169 3300006163 Bacteria 1675
50 Ga0070716_100305286 3300006173 Bacteria 1109
51 Ga0070712_100000350 3300006175 Bacteria 26114
52 Ga0070712_100015813 3300006175 Bacteria 4865
53 Ga0070712_100167877 3300006175 Bacteria 1700
54 Ga0075428_100234133 3300006844 Bacteria 1982
55 Ga0075429_100008266 3300006880 Bacteria 9046
56 Ga0068865_101551194 3300006881 Bacteria 594
57 Ga0097620_102244030 3300006931 Unclassified 602
58 Ga0105240_10192106 3300009093 Bacteria 2400
59 Ga0111539_10042463 3300009094 Bacteria 5460
60 Ga0111539_10325524 3300009094 Bacteria 1789
61 Ga0105247_10503042 3300009101 Bacteria 883
62 Ga0114129_10007041 3300009147 Bacteria 16012
63 Ga0105243_10212862 3300009148 Bacteria 1703
64 Ga0105243_11420081 3300009148 Bacteria 715
65 Ga0105239_10057026 3300010375 Bacteria 4285
66 Ga0105246_10009458 3300011119 Bacteria 6005
67 Ga0157369_11710527 3300013105 Bacteria 639
68 Ga0157378_11112979 3300013297 Bacteria 827
69 Ga0157376_10054472 3300014969 Bacteria 3334
70 Ga0197907_10486479 3300020069 Bacteria 1013
71 Ga0197907_11018749 3300020069 Bacteria 1517
72 Ga0206350_10424558 3300020080 Bacteria 603
73 Ga0213873_10143465 3300021358 Bacteria 715
74 Ga0213874_10000186 3300021377 Bacteria 11171
75 Ga0213874_10008247 3300021377 Bacteria 2534
76 Ga0213874_10037791 3300021377 Bacteria 1430
77 Ga0213874_10093126 3300021377 Bacteria 992
78 Ga0213874_10096106 3300021377 Bacteria 979
79 Ga0213874_10227973 3300021377 Bacteria 679
80 Ga0213876_10003499 3300021384 Bacteria 8968
81 Ga0213876_10016162 3300021384 Bacteria 3944
82 Ga0213876_10024698 3300021384 Bacteria 3172
83 Ga0213876_10028858 3300021384 Bacteria 2926
84 Ga0213876_10033874 3300021384 Bacteria 2693
85 Ga0213876_10034180 3300021384 Bacteria 2681
86 Ga0213876_10106710 3300021384 Bacteria 1486
87 Ga0213875_10040297 3300021388 Bacteria 2199
88 Ga0213875_10058618 3300021388 Bacteria 1802
89 Ga0213875_10101254 3300021388 Bacteria 1344
90 Ga0213875_10116634 3300021388 Bacteria 1247
91 Ga0213875_10636439 3300021388 Bacteria 516
92 Ga0207692_10000003 3300025898 Bacteria 431531
93 Ga0207692_10009886 3300025898 Bacteria 3998
94 Ga0207710_10169607 3300025900 Bacteria 1066
95 Ga0207685_10046477 3300025905 Bacteria 1652
96 Ga0207699_10255003 3300025906 Bacteria 1210
97 Ga0207699_10492613 3300025906 Bacteria 884
98 Ga0207695_10169099 3300025913 Bacteria 2112
99 Ga0207693_10000138 3300025915 Bacteria 66126
100 Ga0207693_10006875 3300025915 Bacteria 9395
101 Ga0207693_10117823 3300025915 Bacteria 2085
102 Ga0207693_10416149 3300025915 Bacteria 1051
103 Ga0207663_10026405 3300025916 Bacteria 3371
104 Ga0207663_10847037 3300025916 Bacteria 730
105 Ga0207657_10376235 3300025919 Bacteria 1119
106 Ga0207681_10050270 3300025923 Bacteria 2820
107 Ga0207700_10113426 3300025928 Bacteria 2185
108 Ga0207700_10361207 3300025928 Bacteria 1266
109 Ga0207700_10504341 3300025928 Bacteria 1071
110 Ga0207700_11784428 3300025928 Bacteria 541
111 Ga0207664_10002353 3300025929 Bacteria 12503
112 Ga0207664_10003706 3300025929 Bacteria 10244
113 Ga0207664_10063180 3300025929 Bacteria 2959
114 Ga0207664_10077419 3300025929 Bacteria 2694
115 Ga0207664_10104360 3300025929 Bacteria 2347
116 Ga0207664_10368246 3300025929 Bacteria 1274
117 Ga0207664_10368946 3300025929 Bacteria 1273
118 Ga0207664_10765083 3300025929 Bacteria 869
119 Ga0207690_10000165 3300025932 Bacteria 51537
120 Ga0207706_10269038 3300025933 Bacteria 1487
121 Ga0207665_10052912 3300025939 Bacteria 2736
122 Ga0207661_10501208 3300025944 Bacteria 1109
123 Ga0207679_10014248 3300025945 Bacteria 5223
124 Ga0207708_10882017 3300026075 Bacteria 773
125 Ga0207708_11576741 3300026075 Bacteria 577
126 Ga0207702_10210496 3300026078 Bacteria 1807
127 Ga0207702_12315697 3300026078 Bacteria 525
128 Ga0207674_10588438 3300026116 Bacteria 1075
129 Ga0207428_10027915 3300027907 Bacteria 4695
130 Ga0268265_11713672 3300028380 Bacteria 634
131 Ga0265337_1091432 3300028556 Bacteria 830
132 Ga0265326_10000082 3300028558 Bacteria 51208
133 Ga0265319_1000357 3300028563 Bacteria 33082
134 Ga0265334_10000050 3300028573 Bacteria 88877
135 Ga0265336_10014127 3300028666 Bacteria 2649
136 Ga0265338_10021918 3300028800 Bacteria 6638
137 Ga0265338_10583998 3300028800 Bacteria 779
138 Ga0265324_10007767 3300029957 Bacteria 4315
139 Ga0265320_10255225 3300031240 Bacteria 777
140 Ga0265340_10143615 3300031247 Bacteria 1091
141 Ga0265327_10422979 3300031251 Bacteria 577
142 Ga0265314_10548663 3300031711 Bacteria 602
143 Ga0307405_10103184 3300031731 Bacteria 1917
144 Ga0307410_10176983 3300031852 Bacteria 1612
145 Ga0326468_10044633 3300031889 Bacteria 648
146 Ga0307406_10419078 3300031901 Bacteria 1066
147 Ga0307412_10107422 3300031911 Bacteria 1986
148 Ga0307409_100000912 3300031995 Bacteria 13722
149 Ga0307416_100042798 3300032002 Bacteria 3539
150 Ga0307416_100101401 3300032002 Bacteria 2507
151 Ga0307416_102196577 3300032002 Bacteria 653
152 Ga0307411_10021729 3300032005 Bacteria 3762
153 Ga0307415_101861186 3300032126 Bacteria 583
154 Ga0373923_0299609 3300035111 Bacteria 760
155 Ga0373953_0073307 3300035117 Bacteria 1415
156 Ga0373956_0048203 3300035119 Bacteria 1908
157 Ga0373943_0362079 3300035170 Bacteria 833
158 Ga0373955_0340904 3300035172 Bacteria 907
159 Ga0373935_0188623 3300035692 Bacteria 1419
160 Ga0373933_0108089 3300035724 Bacteria 1732
161 Ga0373947_0660594 3300035725 Bacteria 713
162 Ga0395900_0015467 3300037418 Bacteria 7778
163 Ga0395898_0000942 3300037466 Bacteria 46333
164 Ga0436364_0202825 3300037853 Bacteria 886
165 Ga0436364_0221495 3300037853 Bacteria 40749
166 Ga0436364_0263478 3300037853 Bacteria 1490
167 Ga0436364_0367212 3300037853 Bacteria 15974
168 Ga0436364_0418919 3300037853 Bacteria 2606
169 Ga0436364_0544274 3300037853 Bacteria 2558
170 Ga0436364_0636773 3300037853 Bacteria 941
171 Ga0436364_0932459 3300037853 Bacteria 3637
172 Ga0436364_1076263 3300037853 Bacteria 4949
173 Ga0436364_1336511 3300037853 Bacteria 1776
174 Ga0436364_1412997 3300037853 Bacteria 1914
175 Ga0436364_1439225 3300037853 Bacteria 2635
176 Ga0436364_1492198 3300037853 Bacteria 917
177 Ga0436364_1520893 3300037853 Bacteria 729
178 Ga0436365_0037258 3300039437 Bacteria 1370
179 Ga0436365_0146857 3300039437 Bacteria 6018
180 Ga0436365_0490069 3300039437 Bacteria 5129
181 Ga0436365_0591671 3300039437 Bacteria 2625
182 Ga0436365_0682782 3300039437 Bacteria 2975
183 Ga0436365_0712170 3300039437 Bacteria 984
184 Ga0436365_0757678 3300039437 Bacteria 2752
185 Ga0436365_0846688 3300039437 Bacteria 1143
186 Ga0436365_1175174 3300039437 Bacteria 2597
187 Ga0436365_1246345 3300039437 Bacteria 4339
188 Ga0436365_1420793 3300039437 Bacteria 662
189 Ga0436365_1570818 3300039437 Bacteria 3668
190 Ga0436365_1662543 3300039437 Bacteria 16980
191 Ga0436365_1799054 3300039437 Bacteria 1160
192 Ga0436360_0549397 3300039438 Bacteria 2012
193 Ga0436363_0075843 3300039450 Bacteria 973
194 Ga0436363_0080620 3300039450 Bacteria 1365
195 Ga0436363_0109124 3300039450 Bacteria 1153
196 Ga0436363_0136874 3300039450 Bacteria 50367
197 Ga0436363_0177672 3300039450 Bacteria 2112
198 Ga0436363_0718598 3300039450 Bacteria 915
199 Ga0436363_0791614 3300039450 Bacteria 1175
200 Ga0436363_0869812 3300039450 Bacteria 2166
201 Ga0436363_1054048 3300039450 Bacteria 1543
202 Ga0436363_1105196 3300039450 Bacteria 4339
203 Ga0436363_1197042 3300039450 Bacteria 732
204 Ga0436362_0527163 3300039453 Bacteria 973
205 Ga0436362_0641269 3300039453 Bacteria 5304
206 Ga0436362_0771249 3300039453 Bacteria 702
207 Ga0436362_0857701 3300039453 Bacteria 540
208 Ga0436362_1080435 3300039453 Bacteria 1499
209 Ga0436362_1083294 3300039453 Bacteria 2425
210 Ga0451837_0248673 3300041494 Bacteria 749
211 Ga0466969_0266720 3300044656 Bacteria 776
212 Ga0466965_0127682 3300044683 Bacteria 1317
213 Ga0466965_0543518 3300044683 Bacteria 655
214 Ga0466966_0081110 3300044684 Bacteria 2020
215 Ga0466966_0084236 3300044684 Bacteria 1978
216 Ga0466966_0509245 3300044684 Bacteria 724
217 Ga0466966_0638771 3300044684 Bacteria 641
218 Ga0466961_0012519 3300044693 Bacteria 5428
219 Ga0466961_0415198 3300044693 Bacteria 816
220 Ga0466961_0695367 3300044693 Bacteria 609
221 Ga0466963_0037814 3300044694 Bacteria 3154
222 Ga0466963_0075284 3300044694 Bacteria 2278
223 Ga0466963_0118031 3300044694 Bacteria 1824
224 Ga0466963_0373779 3300044694 Bacteria 1004
225 Ga0466963_0394949 3300044694 Bacteria 975
226 Ga0466963_0430125 3300044694 Bacteria 931
227 Ga0466963_1298382 3300044694 Bacteria 511
228 Ga0466964_0917639 3300044706 Bacteria 502
229 Ga0466971_0012687 3300044719 Bacteria 3696
230 Ga0466971_0077994 3300044719 Bacteria 1509
231 Ga0466971_0219489 3300044719 Bacteria 901
232 Ga0466971_0392594 3300044719 Bacteria 675
233 Ga0466968_0009436 3300044735 Bacteria 3752
234 Ga0466968_0020586 3300044735 Bacteria 2664
235 Ga0466968_0130479 3300044735 Bacteria 1143
236 Ga0466968_0309786 3300044735 Bacteria 761
237 Ga0466968_0410867 3300044735 Bacteria 665
238 Ga0466968_0715419 3300044735 Bacteria 512
239 Ga0466970_0034802 3300044765 Bacteria 2668
240 Ga0466970_0117864 3300044765 Bacteria 1453
241 Ga0466970_0334075 3300044765 Bacteria 858
242 Ga0466970_0507340 3300044765 Bacteria 695
243 Ga0466957_0152205 3300044842 Bacteria 1497
244 Ga0466957_0379778 3300044842 Bacteria 963
245 Ga0466957_0493167 3300044842 Bacteria 848
246 Ga0466957_0608019 3300044842 Bacteria 766
247 Ga0466957_0839643 3300044842 Bacteria 654
248 Ga0466957_0928882 3300044842 Bacteria 623
249 Ga0466960_0297957 3300044901 Bacteria 908
250 Ga0466960_0482182 3300044901 Bacteria 724
251 Ga0466959_0010246 3300045049 Bacteria 6692
252 Ga0466959_0027561 3300045049 Bacteria 4213
253 Ga0466959_0094213 3300045049 Bacteria 2148
254 Ga0466959_0282102 3300045049 Bacteria 1140
255 Ga0466959_0301754 3300045049 Bacteria 1096
256 Ga0466959_0345909 3300045049 Bacteria 1014
257 Ga0466959_0406985 3300045049 Bacteria 924
258 Ga0466959_0416551 3300045049 Bacteria 912
259 Ga0466959_0625478 3300045049 Bacteria 723
260 Ga0466958_0024987 3300045836 Bacteria 3518
261 Ga0466958_0030909 3300045836 Bacteria 3183
262 Ga0466958_0037268 3300045836 Bacteria 2914
263 Ga0466958_0046126 3300045836 Bacteria 2630
264 Ga0466958_0048176 3300045836 Bacteria 2574
265 Ga0466958_0088395 3300045836 Bacteria 1914
266 Ga0466958_0155336 3300045836 Bacteria 1444
267 Ga0466958_0201339 3300045836 Bacteria 1267
268 Ga0466958_0209820 3300045836 Bacteria 1241
269 Ga0466958_0377118 3300045836 Bacteria 914
270 Ga0466967_0099179 3300045976 Bacteria 2660
271 Ga0466967_0190963 3300045976 Bacteria 1936
272 Ga0466967_0530992 3300045976 Bacteria 1157
273 Ga0466967_0749561 3300045976 Bacteria 968
274 Ga0466967_1297192 3300045976 Bacteria 725
275 Ga0466967_1645693 3300045976 Bacteria 639
276 Ga0466967_1675057 3300045976 Unclassified 633
277 Ga0466967_2030697 3300045976 Bacteria 571
278 Ga0495651_0112484 3300046462 Bacteria 2011
279 Ga0495653_0099314 3300046463 Bacteria 2112
280 Ga0495664_0166888 3300046477 Bacteria 1336
281 Ga0495608_0002787 3300046511 Bacteria 12547
282 Ga0495618_0061274 3300046514 Bacteria 2386
283 Ga0495628_0473007 3300046516 Bacteria 908
284 Ga0495630_0199389 3300046517 Bacteria 1527
285 Ga0495652_0100565 3300046529 Bacteria 2345
286 Ga0495640_0339886 3300046533 Bacteria 928
287 Ga0495587_0187281 3300046536 Bacteria 1172
288 Ga0495645_0705783 3300046543 Bacteria 612
289 Ga0495667_0003950 3300046559 Bacteria 9947
290 Ga0495634_0523608 3300046642 Bacteria 693
291 Ga0495635_0058145 3300046663 Bacteria 2660
292 Ga0495588_0529771 3300046674 Bacteria 617
293 Ga0495657_0380572 3300046675 Bacteria 832
294 Ga0495599_0044457 3300046678 Bacteria 2785
295 Ga0495623_0134119 3300046679 Bacteria 1479
296 Ga0495613_0138768 3300046689 Bacteria 1738
297 Ga0495600_0088557 3300046809 Bacteria 2019
298 Ga0495604_0253818 3300047317 Bacteria 1198
299 Ga0495674_0036191 3300047319 Bacteria 4446
300 Ga0495674_0344363 3300047319 Bacteria 1211
301 Ga0495672_0027084 3300047320 Bacteria 3648
302 Ga0495680_0077762 3300047322 Bacteria 2512
303 Ga0495679_112085 3300047446 Bacteria 750
304 Ga0495593_0674260 3300047673 Bacteria 519
305 Ga0495602_0043203 3300048088 Bacteria 4100
306 Ga0496100_0001215 3300048903 Bacteria 12520
307 Ga0496100_0001383 3300048903 Bacteria 11886
308 Ga0496101_0001892 3300048904 Bacteria 12640
309 Ga0496102_0417127 3300048905 Bacteria 1261
310 Ga0496102_1872354 3300048905 Bacteria 517
311 Ga0496104_0034704 3300048907 Bacteria 4705
312 Ga0496104_0375202 3300048907 Bacteria 1335
313 Ga0496105_0051150 3300048908 Bacteria 3414
314 Ga0496105_0645669 3300048908 Bacteria 817
315 Ga0496108_0168712 3300048911 Bacteria 1893
316 Ga0496108_0385087 3300048911 Bacteria 1224
317 Ga0496109_0015149 3300048912 Bacteria 6712
318 Ga0496109_0505553 3300048912 Bacteria 1141
319 Ga0496109_1706533 3300048912 Bacteria 563
320 Ga0496111_0190457 3300048914 Bacteria 1525
321 Ga0496112_0001057 3300048915 Bacteria 20325
322 Ga0496112_0015765 3300048915 Bacteria 7060
323 Ga0496112_1127685 3300048915 Bacteria 702
324 Ga0496113_0082336 3300048916 Bacteria 2468
325 Ga0496115_0003352 3300048918 Bacteria 11494
326 Ga0496115_0005908 3300048918 Bacteria 8923
327 Ga0496115_0294598 3300048918 Bacteria 1330
328 Ga0496116_0000529 3300048919 Bacteria 51417
329 Ga0496118_0032830 3300048921 Bacteria 4268
330 Ga0496119_0003596 3300048922 Bacteria 15948
331 Ga0496122_0115115 3300048925 Bacteria 1753
332 Ga0501331_08180 3300049547 Bacteria 631
333 Ga0501042_0437925 3300049578 Bacteria 948
334 Ga0501067_0113864 3300049583 Bacteria 1504
335 Ga0501071_0845592 3300049587 Bacteria 706
336 Ga0501072_0152471 3300049588 Bacteria 1843
337 Ga0501235_075289 3300049669 Bacteria 802
338 nmdc:mga05p37_48909_c1 3300050507 Bacteria 5200
339 nmdc:mga09592_13588_c1 3300050508 Bacteria 6651
340 nmdc:mga06r32_1277548_c1 3300050510 Bacteria 678
341 nmdc:mga08y16_20917_c1 3300050511 Bacteria 6908
342 Ga0495601_0164721 3300053077 Bacteria 1449
343 Ga0495612_0130686 3300053078 Bacteria 1085
344 Ga0495655_0205880 3300053083 Bacteria 645
345 Ga0495595_0025946 3300053084 Bacteria 2599
346 Ga0495619_0011699 3300053085 Bacteria 5528
347 Ga0500595_020404 3300053119 Bacteria 2386
348 Ga0587088_020768 3300059508 Bacteria 1092
349 Ga0587091_145469 3300059511 Bacteria 597
350 Ga0587067_230681 3300059640 Unclassified 506
351 Ga0587107_031816 3300059652 Unclassified 807
352 Ga0466962_0202169 3300061719 Bacteria 971
353 Ga0466962_0212329 3300061719 Bacteria 947
354 Ga0070714_100032487
355 Ga0058862_12277685
356 Ga0070683_100057365
357 Ga0070683_100919012
358 Ga0070680_101659898
359 Ga0068868_102102222
360 Ga0070660_100594666
361 Ga0070691_10363603
362 Ga0070669_100067688
363 Ga0070659_100000160
364 Ga0070709_10149091
365 Ga0070709_10274511
366 Ga0070709_10566850
367 Ga0070714_100002996
368 Ga0070714_100061936
369 Ga0070714_100112812
370 Ga0070714_100119506
371 Ga0070714_100163126
372 Ga0070714_100712794
373 Ga0070714_100915050
374 Ga0070714_101575417
375 Ga0070713_100076472
376 Ga0070713_100215175
377 Ga0070713_100587753
378 Ga0070713_100938923
379 Ga0070710_10000005
380 Ga0070710_10007649
381 Ga0070710_10624131
382 Ga0070711_100014201
383 Ga0070711_100755931
384 Ga0070705_100002004
385 Ga0070699_101193470
386 Ga0070679_102083049
387 Ga0070704_100254503
388 Ga0070704_101267062
389 Ga0070664_100039885
390 Ga0068856_100411058
391 Ga0068859_102244177
392 Ga0068862_101834383
393 Ga0070717_10000069
394 Ga0070717_10031367
395 Ga0070717_10150169
396 Ga0070717_10265485
397 Ga0070717_10443406
398 Ga0070717_10654395
399 Ga0070717_10859329
400 Ga0070717_11816356
401 Ga0075368_10189970
402 Ga0070715_10059169
403 Ga0070716_100305286
404 Ga0070712_100000350
405 Ga0070712_100015813
406 Ga0070712_100167877
407 Ga0075428_100234133
408 Ga0075429_100008266
409 Ga0068865_101551194
410 Ga0097620_102244030
411 Ga0105240_10192106
412 Ga0111539_10042463
413 Ga0111539_10325524
414 Ga0105247_10503042
415 Ga0114129_10007041
416 Ga0105243_10212862
417 Ga0105243_11420081
418 Ga0105239_10057026
419 Ga0105246_10009458
420 Ga0157369_11710527
421 Ga0157378_11112979
422 Ga0157376_10054472
423 Ga0197907_10486479
424 Ga0197907_11018749
425 Ga0206350_10424558
426 Ga0213873_10143465
427 Ga0213874_10000186
428 Ga0213874_10008247
429 Ga0213874_10037791
430 Ga0213874_10093126
431 Ga0213874_10096106
432 Ga0213874_10227973
433 Ga0213876_10003499
434 Ga0213876_10016162
435 Ga0213876_10024698
436 Ga0213876_10028858
437 Ga0213876_10033874
438 Ga0213876_10034180
439 Ga0213876_10106710
440 Ga0213875_10040297
441 Ga0213875_10058618
442 Ga0213875_10101254
443 Ga0213875_10116634
444 Ga0213875_10636439
445 Ga0207692_10000003
446 Ga0207692_10009886
447 Ga0207710_10169607
448 Ga0207685_10046477
449 Ga0207699_10255003
450 Ga0207699_10492613
451 Ga0207695_10169099
452 Ga0207693_10000138
453 Ga0207693_10006875
454 Ga0207693_10117823
455 Ga0207693_10416149
456 Ga0207663_10026405
457 Ga0207663_10847037
458 Ga0207657_10376235
459 Ga0207681_10050270
460 Ga0207700_10113426
461 Ga0207700_10361207
462 Ga0207700_10504341
463 Ga0207700_11784428
464 Ga0207664_10002353
465 Ga0207664_10003706
466 Ga0207664_10063180
467 Ga0207664_10077419
468 Ga0207664_10104360
469 Ga0207664_10368246
470 Ga0207664_10368946
471 Ga0207664_10765083
472 Ga0207690_10000165
473 Ga0207706_10269038
474 Ga0207665_10052912
475 Ga0207661_10501208
476 Ga0207679_10014248
477 Ga0207708_10882017
478 Ga0207708_11576741
479 Ga0207702_10210496
480 Ga0207702_12315697
481 Ga0207674_10588438
482 Ga0207428_10027915
483 Ga0268265_11713672
484 Ga0265337_1091432
485 Ga0265326_10000082
486 Ga0265319_1000357
487 Ga0265334_10000050
488 Ga0265336_10014127
489 Ga0265338_10021918
490 Ga0265338_10583998
491 Ga0265324_10007767
492 Ga0265320_10255225
493 Ga0265340_10143615
494 Ga0265327_10422979
495 Ga0265314_10548663
496 Ga0307405_10103184
497 Ga0307410_10176983
498 Ga0326468_10044633
499 Ga0307406_10419078
500 Ga0307412_10107422
501 Ga0307409_100000912
502 Ga0307416_100042798
503 Ga0307416_100101401
504 Ga0307416_102196577
505 Ga0307411_10021729
506 Ga0307415_101861186
507 Ga0373923_0299609
508 Ga0373953_0073307
509 Ga0373956_0048203
510 Ga0373943_0362079
511 Ga0373955_0340904
512 Ga0373935_0188623
513 Ga0373933_0108089
514 Ga0373947_0660594
515 Ga0395900_0015467
516 Ga0395898_0000942
517 Ga0436364_0202825
518 Ga0436364_0221495
519 Ga0436364_0263478
520 Ga0436364_0367212
521 Ga0436364_0418919
522 Ga0436364_0544274
523 Ga0436364_0636773
524 Ga0436364_0932459
525 Ga0436364_1076263
526 Ga0436364_1336511
527 Ga0436364_1412997
528 Ga0436364_1439225
529 Ga0436364_1492198
530 Ga0436364_1520893
531 Ga0436365_0037258
532 Ga0436365_0146857
533 Ga0436365_0490069
534 Ga0436365_0591671
535 Ga0436365_0682782
536 Ga0436365_0712170
537 Ga0436365_0757678
538 Ga0436365_0846688
539 Ga0436365_1175174
540 Ga0436365_1246345
541 Ga0436365_1420793
542 Ga0436365_1570818
543 Ga0436365_1662543
544 Ga0436365_1799054
545 Ga0436360_0549397
546 Ga0436363_0075843
547 Ga0436363_0080620
548 Ga0436363_0109124
549 Ga0436363_0136874
550 Ga0436363_0177672
551 Ga0436363_0718598
552 Ga0436363_0791614
553 Ga0436363_0869812
554 Ga0436363_1054048
555 Ga0436363_1105196
556 Ga0436363_1197042
557 Ga0436362_0527163
558 Ga0436362_0641269
559 Ga0436362_0771249
560 Ga0436362_0857701
561 Ga0436362_1080435
562 Ga0436362_1083294
563 Ga0451837_0248673
564 Ga0466969_0266720
565 Ga0466965_0127682
566 Ga0466965_0543518
567 Ga0466966_0081110
568 Ga0466966_0084236
569 Ga0466966_0509245
570 Ga0466966_0638771
571 Ga0466961_0012519
572 Ga0466961_0415198
573 Ga0466961_0695367
574 Ga0466963_0037814
575 Ga0466963_0075284
576 Ga0466963_0118031
577 Ga0466963_0373779
578 Ga0466963_0394949
579 Ga0466963_0430125
580 Ga0466963_1298382
581 Ga0466964_0917639
582 Ga0466971_0012687
583 Ga0466971_0077994
584 Ga0466971_0219489
585 Ga0466971_0392594
586 Ga0466968_0009436
587 Ga0466968_0020586
588 Ga0466968_0130479
589 Ga0466968_0309786
590 Ga0466968_0410867
591 Ga0466968_0715419
592 Ga0466970_0034802
593 Ga0466970_0117864
594 Ga0466970_0334075
595 Ga0466970_0507340
596 Ga0466957_0152205
597 Ga0466957_0379778
598 Ga0466957_0493167
599 Ga0466957_0608019
600 Ga0466957_0839643
601 Ga0466957_0928882
602 Ga0466960_0297957
603 Ga0466960_0482182
604 Ga0466959_0010246
605 Ga0466959_0027561
606 Ga0466959_0094213
607 Ga0466959_0282102
608 Ga0466959_0301754
609 Ga0466959_0345909
610 Ga0466959_0406985
611 Ga0466959_0416551
612 Ga0466959_0625478
613 Ga0466958_0024987
614 Ga0466958_0030909
615 Ga0466958_0037268
616 Ga0466958_0046126
617 Ga0466958_0048176
618 Ga0466958_0088395
619 Ga0466958_0155336
620 Ga0466958_0201339
621 Ga0466958_0209820
622 Ga0466958_0377118
623 Ga0466967_0099179
624 Ga0466967_0190963
625 Ga0466967_0530992
626 Ga0466967_0749561
627 Ga0466967_1297192
628 Ga0466967_1645693
629 Ga0466967_1675057
630 Ga0466967_2030697
631 Ga0495651_0112484
632 Ga0495653_0099314
633 Ga0495664_0166888
634 Ga0495608_0002787
635 Ga0495618_0061274
636 Ga0495628_0473007
637 Ga0495630_0199389
638 Ga0495652_0100565
639 Ga0495640_0339886
640 Ga0495587_0187281
641 Ga0495645_0705783
642 Ga0495667_0003950
643 Ga0495634_0523608
644 Ga0495635_0058145
645 Ga0495588_0529771
646 Ga0495657_0380572
647 Ga0495599_0044457
648 Ga0495623_0134119
649 Ga0495613_0138768
650 Ga0495600_0088557
651 Ga0495604_0253818
652 Ga0495674_0036191
653 Ga0495674_0344363
654 Ga0495672_0027084
655 Ga0495680_0077762
656 Ga0495679_112085
657 Ga0495593_0674260
658 Ga0495602_0043203
659 Ga0496100_0001215
660 Ga0496100_0001383
661 Ga0496101_0001892
662 Ga0496102_0417127
663 Ga0496102_1872354
664 Ga0496104_0034704
665 Ga0496104_0375202
666 Ga0496105_0051150
667 Ga0496105_0645669
668 Ga0496108_0168712
669 Ga0496108_0385087
670 Ga0496109_0015149
671 Ga0496109_0505553
672 Ga0496109_1706533
673 Ga0496111_0190457
674 Ga0496112_0001057
675 Ga0496112_0015765
676 Ga0496112_1127685
677 Ga0496113_0082336
678 Ga0496115_0003352
679 Ga0496115_0005908
680 Ga0496115_0294598
681 Ga0496116_0000529
682 Ga0496118_0032830
683 Ga0496119_0003596
684 Ga0496122_0115115
685 Ga0501331_08180
686 Ga0501042_0437925
687 Ga0501067_0113864
688 Ga0501071_0845592
689 Ga0501072_0152471
690 Ga0501235_075289
691 nmdc:mga05p37_48909_c1
692 nmdc:mga09592_13588_c1
693 nmdc:mga06r32_1277548_c1
694 nmdc:mga08y16_20917_c1
695 Ga0495601_0164721
696 Ga0495612_0130686
697 Ga0495655_0205880
698 Ga0495595_0025946
699 Ga0495619_0011699
700 Ga0500595_020404
701 Ga0587088_020768
702 Ga0587091_145469
703 Ga0587067_230681
704 Ga0587107_031816
705 Ga0466962_0202169
706 Ga0466962_0212329

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00410

Ribosomal_S8

Ribosomal protein S8

5

138

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fmw-assembly1.cif.gz_H the structure of a hibernating ribosome in the lyme disease pathogen 0.973 1 135
8cwo-assembly1.cif.gz_H cutibacterium acnes 30s ribosomal subunit with sarecycline bound, body domain only in the local refined map 0.97 2 135
8fmw-assembly1.cif.gz_H the structure of a hibernating ribosome in the lyme disease pathogen 0.9658 1 135
5xyu-assembly1.cif.gz_H small subunit of mycobacterium smegmatis ribosome 0.9651 2 135
5zeb-assembly1.cif.gz_h m. smegmatis p/p state 70s ribosome structure 0.9643 3 135
ID Description Score Start End Superfamily
3ofpH02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1; 0.9729 78 135 3.30.1490.10
3uz6K02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1; 0.9678 78 135 3.30.1490.10
3ofpH02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1; 0.9569 78 135 3.30.1490.10
3uz6K02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1; 0.952 78 135 3.30.1490.10
3ofbH01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1; 0.918 2 76 3.30.1370.30
ID Description Score Start End GO Terms
AF-A0A218L615-F1-model_v4 Small ribosomal subunit protein uS8c (30S ribosomal protein S8, chloroplastic) 1.002 79 135 GO:0003735
GO:0005840
GO:0006412
GO:0009507
GO:0019843
GO:1990904
AF-A0A2V7XB09-F1-model_v4 Small ribosomal subunit protein uS8 (30S ribosomal protein S8) 0.9991 77 135 GO:0003735
GO:0005840
GO:0006412
GO:1990904
AF-A0A1F6RYW0-F1-model_v4 Small ribosomal subunit protein uS8 (30S ribosomal protein S8) 0.9961 77 135 GO:0003735
GO:0005840
GO:0006412
GO:1990904
AF-A0A1Q6ZZ57-F1-model_v4 Small ribosomal subunit protein uS8 (30S ribosomal protein S8) 0.9959 67 135 GO:0003735
GO:0005737
GO:0005840
GO:0006412
GO:0019843
GO:1990904
AF-K9JAZ4-F1-model_v4 Small ribosomal subunit protein uS8c (30S ribosomal protein S8, chloroplastic) 0.9958 79 135 GO:0003735
GO:0005840
GO:0006412
GO:0009507
GO:0019843
GO:1990904

Map