F418691

General Info

Members Datasets Scaffolds Average Seq Length
351 205 702 381

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10182208|Ga0307405_101822081
Length 423
Sequence MNMITKVASDGDAKPLTVKIANRPALRRAAMYGTPLVVLAAAVALWNSDPSPAAAPPTPMVTVAAPVQSEVNLWDDYVGRFEASRTVEVRPRVSGQIVAVHFRDGAIVQKGQLLFTVDPRPFTAALAEARAGVSTAQAQLSLADLNLGRAHRLLEANAVSQANVDQLTADVRTARAALAAAQAVVRQRALEVEFTQVRAPIGGRISDRKIDAGNIVSAGVDGGTLLTTINALDPIYFTFDVPESLYLKDSRERRAGAQGDVAEIRLQDEATYNWRGTLDFTDNGISQNSGTIRARAVVRNPDYFLTPGMFGNMRLADGGTKPALLIPDAAIRTDQARKIVLVVGKDDTVAAKPVETGPLVGNLRVIRSGITAADRVVVQGVQFAMPGAKVKPRVTQVRLAEGNMPKEAQPETPSASQATLAAR

Samples

Sample ID Description Type Environment
1 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
8 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
9 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
46 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
47 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
67 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
114 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
115 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
116 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
124 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
125 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
126 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
132 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
133 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
134 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
135 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
136 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
137 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
138 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
139 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
140 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
141 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
142 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
143 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
144 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
145 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
146 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
147 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
148 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
149 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
150 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
151 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
152 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
153 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
154 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
155 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
156 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
157 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
158 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
159 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
160 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
161 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
170 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
171 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
172 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
173 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
174 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
177 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
178 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
179 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
180 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
181 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
182 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
183 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
184 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
185 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
186 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
187 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
188 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
189 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
190 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
191 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
192 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
193 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
194 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
195 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
196 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
197 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
198 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
199 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
200 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
201 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
202 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
203 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
204 639633007 Azoarcus olearius BH72 Isolate Unclassified
205 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.44
Metatranscriptomes 0
Isolates 2.56

Biome Distribution

Category Percentage (%)
Aerial Root 0.57
Bulb 0
Endosphere 9.69
Nodule 0
Rhizoplane 3.42
Rhizosphere 80.63
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307405_10182208 3300031731 Bacteria 1509
2 JGI24740J21852_10001248 3300001979 Bacteria 11506
3 JGI24737J22298_10003513 3300001990 Bacteria 5528
4 JGI24748J21848_1001177 3300002074 Bacteria 2854
5 JGI24751J29686_10000046 3300002459 Bacteria 73259
6 JGI25153J46596_10000065 3300003215 Bacteria 124645
7 Ga0055525_1000058 3300003759 Bacteria 210367
8 Ga0055542_1000041 3300003762 Bacteria 208892
9 Ga0055529_1000040 3300003763 Bacteria 230562
10 Ga0065165_1000987 3300005262 Bacteria 35180
11 Ga0065715_10000622 3300005293 Bacteria 11008
12 Ga0070658_10000979 3300005327 Bacteria 24531
13 Ga0070658_10003718 3300005327 Bacteria 12480
14 Ga0070676_10005027 3300005328 Bacteria 7009
15 Ga0070670_100000006 3300005331 Bacteria 319420
16 Ga0070670_100000445 3300005331 Bacteria 33591
17 Ga0070670_100076914 3300005331 Bacteria 2868
18 Ga0070670_100077882 3300005331 Bacteria 2848
19 Ga0070670_100180388 3300005331 Bacteria 1833
20 Ga0070670_100267239 3300005331 Bacteria 1492
21 Ga0070677_10007017 3300005333 Bacteria 3748
22 Ga0070660_100018038 3300005339 Bacteria 5149
23 Ga0070661_100005011 3300005344 Bacteria 9124
24 Ga0070661_100079031 3300005344 Bacteria 2427
25 Ga0070661_100134418 3300005344 Bacteria 1860
26 Ga0070668_100029728 3300005347 Bacteria 4151
27 Ga0070669_100000102 3300005353 Bacteria 82010
28 Ga0070669_100007049 3300005353 Bacteria 8078
29 Ga0070669_100061737 3300005353 Bacteria 2754
30 Ga0070669_100112549 3300005353 Bacteria 2067
31 Ga0070675_100226423 3300005354 Bacteria 1630
32 Ga0070671_100014139 3300005355 Bacteria 6445
33 Ga0070671_100031368 3300005355 Bacteria 4390
34 Ga0070673_100021538 3300005364 Bacteria 4675
35 Ga0070673_100048203 3300005364 Bacteria 3320
36 Ga0070673_100072994 3300005364 Bacteria 2761
37 Ga0070659_100057906 3300005366 Bacteria 3057
38 Ga0070667_100002840 3300005367 Bacteria 14946
39 Ga0070667_100008721 3300005367 Bacteria 8405
40 Ga0070667_100015297 3300005367 Bacteria 6343
41 Ga0070700_100124767 3300005441 Bacteria 1730
42 Ga0070663_100004725 3300005455 Bacteria 8035
43 Ga0070678_100003471 3300005456 Bacteria 8791
44 Ga0070662_100002527 3300005457 Bacteria 11273
45 Ga0070662_100053944 3300005457 Bacteria 2912
46 Ga0070662_100192705 3300005457 Bacteria 1613
47 Ga0070697_100177451 3300005536 Bacteria 1805
48 Ga0068853_100006005 3300005539 Bacteria 9605
49 Ga0068853_100075570 3300005539 Bacteria 2940
50 Ga0070672_100000401 3300005543 Bacteria 25012
51 Ga0070672_100009738 3300005543 Bacteria 6635
52 Ga0070672_100088820 3300005543 Bacteria 2489
53 Ga0070672_100114978 3300005543 Bacteria 2197
54 Ga0070665_100000103 3300005548 Bacteria 158183
55 Ga0070665_100100988 3300005548 Bacteria 2889
56 Ga0068855_100050254 3300005563 Bacteria 4915
57 Ga0070664_100028322 3300005564 Bacteria 4659
58 Ga0068857_100011403 3300005577 Bacteria 7733
59 Ga0068857_100013064 3300005577 Bacteria 7234
60 Ga0068854_100053778 3300005578 Bacteria 2893
61 Ga0068854_100054295 3300005578 Bacteria 2881
62 Ga0068859_100009002 3300005617 Bacteria 10084
63 Ga0068859_100057353 3300005617 Bacteria 3923
64 Ga0068864_100000014 3300005618 Bacteria 308927
65 Ga0068864_100008242 3300005618 Bacteria 8595
66 Ga0068864_100115346 3300005618 Bacteria 2396
67 Ga0068861_100006194 3300005719 Bacteria 8142
68 Ga0068863_100004402 3300005841 Bacteria 13889
69 Ga0068863_100007329 3300005841 Bacteria 10799
70 Ga0068863_100039239 3300005841 Bacteria 4507
71 Ga0068858_100017540 3300005842 Bacteria 6714
72 Ga0068858_100051690 3300005842 Bacteria 3802
73 Ga0068860_100000076 3300005843 Bacteria 171786
74 Ga0068862_100000007 3300005844 Bacteria 313933
75 Ga0068862_100009358 3300005844 Bacteria 8108
76 Ga0075365_10001694 3300006038 Bacteria 10197
77 Ga0075368_10009379 3300006042 Bacteria 3520
78 Ga0075363_100002091 3300006048 Bacteria 7996
79 Ga0075362_10003744 3300006177 Bacteria 5375
80 Ga0075367_10002755 3300006178 Bacteria 8135
81 Ga0075369_10005536 3300006186 Bacteria 4727
82 Ga0075366_10000499 3300006195 Bacteria 18193
83 Ga0075366_10061024 3300006195 Bacteria 2240
84 Ga0075431_100102616 3300006847 Bacteria 2952
85 Ga0097620_100009002 3300006931 Bacteria 10084
86 Ga0097620_100057351 3300006931 Bacteria 3923
87 Ga0105243_10000608 3300009148 Bacteria 35675
88 Ga0105241_10046687 3300009174 Bacteria 3290
89 Ga0105242_10164762 3300009176 Bacteria 1944
90 Ga0105248_10000139 3300009177 Bacteria 84082
91 Ga0105248_10107756 3300009177 Bacteria 3142
92 Ga0105246_10061572 3300011119 Bacteria 2612
93 Ga0157371_10000148 3300013102 Bacteria 101711
94 Ga0157374_10038803 3300013296 Bacteria 4379
95 Ga0163162_10009605 3300013306 Bacteria 9412
96 Ga0163162_10024334 3300013306 Bacteria 5974
97 Ga0157375_10040235 3300013308 Bacteria 4505
98 Ga0157375_10152304 3300013308 Bacteria 2449
99 Ga0163163_10030080 3300014325 Bacteria 5228
100 Ga0163163_10031692 3300014325 Bacteria 5104
101 Ga0157380_10000014 3300014326 Bacteria 130737
102 Ga0157380_10001552 3300014326 Bacteria 15105
103 Ga0157380_10007717 3300014326 Bacteria 7656
104 Ga0157380_10029916 3300014326 Bacteria 4166
105 Ga0157377_10040774 3300014745 Bacteria 2572
106 Ga0163161_10006778 3300017792 Bacteria 7914
107 Ga0163161_10130881 3300017792 Bacteria 1892
108 Ga0213872_10020063 3300021361 Bacteria 3079
109 Ga0213872_10051554 3300021361 Bacteria 1867
110 Ga0209563_100024 3300025230 Bacteria 601155
111 Ga0209677_104630 3300025253 Bacteria 3886
112 Ga0209148_1000008 3300025254 Bacteria 1504371
113 Ga0209455_1000002 3300025272 Bacteria 1505459
114 Ga0209758_1000007 3300025297 Bacteria 1270410
115 Ga0207656_10053567 3300025321 Bacteria 1751
116 Ga0207682_10001078 3300025893 Bacteria 12593
117 Ga0207680_10106098 3300025903 Bacteria 1813
118 Ga0207680_10146316 3300025903 Bacteria 1571
119 Ga0207647_10006139 3300025904 Bacteria 8752
120 Ga0207705_10000127 3300025909 Bacteria 83788
121 Ga0207654_10000291 3300025911 Bacteria 30467
122 Ga0207695_10024890 3300025913 Bacteria 6719
123 Ga0207671_10009598 3300025914 Bacteria 8067
124 Ga0207657_10042301 3300025919 Bacteria 4021
125 Ga0207657_10051753 3300025919 Bacteria 3569
126 Ga0207649_10000332 3300025920 Bacteria 35824
127 Ga0207649_10016604 3300025920 Bacteria 4156
128 Ga0207681_10000001 3300025923 Bacteria 1105841
129 Ga0207681_10017068 3300025923 Bacteria 4554
130 Ga0207681_10099955 3300025923 Bacteria 2090
131 Ga0207694_10029590 3300025924 Bacteria 4179
132 Ga0207650_10000023 3300025925 Bacteria 308148
133 Ga0207650_10003823 3300025925 Bacteria 10300
134 Ga0207650_10004333 3300025925 Bacteria 9696
135 Ga0207650_10043115 3300025925 Bacteria 3311
136 Ga0207659_10075416 3300025926 Bacteria 2475
137 Ga0207644_10011523 3300025931 Bacteria 5854
138 Ga0207644_10043022 3300025931 Bacteria 3204
139 Ga0207644_10108184 3300025931 Bacteria 2099
140 Ga0207690_10002126 3300025932 Bacteria 12137
141 Ga0207706_10000564 3300025933 Bacteria 39303
142 Ga0207706_10016533 3300025933 Bacteria 6659
143 Ga0207706_10036808 3300025933 Bacteria 4347
144 Ga0207706_10081383 3300025933 Bacteria 2846
145 Ga0207706_10103690 3300025933 Bacteria 2502
146 Ga0207709_10000109 3300025935 Bacteria 128086
147 Ga0207669_10000048 3300025937 Bacteria 60914
148 Ga0207691_10000442 3300025940 Bacteria 41154
149 Ga0207691_10002386 3300025940 Bacteria 18370
150 Ga0207691_10133619 3300025940 Bacteria 2190
151 Ga0207711_10007104 3300025941 Bacteria 9380
152 Ga0207667_10000074 3300025949 Bacteria 171635
153 Ga0207667_10041313 3300025949 Bacteria 4905
154 Ga0207651_10009059 3300025960 Bacteria 5418
155 Ga0207651_10038155 3300025960 Bacteria 3154
156 Ga0207668_10002438 3300025972 Bacteria 10857
157 Ga0207668_10008805 3300025972 Bacteria 6030
158 Ga0207668_10042236 3300025972 Bacteria 3087
159 Ga0207668_10069737 3300025972 Bacteria 2504
160 Ga0207640_10017671 3300025981 Bacteria 4177
161 Ga0207640_10043069 3300025981 Bacteria 2883
162 Ga0207658_10001966 3300025986 Bacteria 15331
163 Ga0207703_10007045 3300026035 Bacteria 8944
164 Ga0207703_10038108 3300026035 Bacteria 3834
165 Ga0207639_10000169 3300026041 Bacteria 50659
166 Ga0207639_10001405 3300026041 Bacteria 16255
167 Ga0207678_10002889 3300026067 Bacteria 15596
168 Ga0207678_10101572 3300026067 Bacteria 2456
169 Ga0207708_10085010 3300026075 Bacteria 2433
170 Ga0207702_10003415 3300026078 Bacteria 14530
171 Ga0207641_10000125 3300026088 Bacteria 112803
172 Ga0207641_10016796 3300026088 Bacteria 5993
173 Ga0207676_10000017 3300026095 Bacteria 308709
174 Ga0207676_10006461 3300026095 Bacteria 8280
175 Ga0207674_10000057 3300026116 Bacteria 113117
176 Ga0207674_10009587 3300026116 Bacteria 11046
177 Ga0207674_10054685 3300026116 Bacteria 4063
178 Ga0207675_100010457 3300026118 Bacteria 8690
179 Ga0207683_10013646 3300026121 Bacteria 6930
180 Ga0207698_10001683 3300026142 Bacteria 12884
181 Ga0207698_10203348 3300026142 Bacteria 1775
182 Ga0209813_10000155 3300027866 Bacteria 23211
183 Ga0268266_10000002 3300028379 Bacteria 3059047
184 Ga0268266_10012574 3300028379 Bacteria 7314
185 Ga0268266_10025348 3300028379 Bacteria 5044
186 Ga0268265_10000002 3300028380 Bacteria 1035381
187 Ga0268265_10006309 3300028380 Bacteria 8034
188 Ga0268264_10000139 3300028381 Bacteria 171848
189 Ga0268264_10081401 3300028381 Bacteria 2767
190 Ga0307513_10054338 3300031456 Bacteria 4295
191 Ga0307408_100149382 3300031548 Bacteria 1843
192 Ga0307413_10026294 3300031824 Bacteria 3205
193 Ga0307413_10035988 3300031824 Bacteria 2846
194 Ga0307413_10058416 3300031824 Bacteria 2364
195 Ga0307413_10131750 3300031824 Bacteria 1712
196 Ga0307410_10001826 3300031852 Bacteria 9892
197 Ga0307410_10036830 3300031852 Bacteria 3189
198 Ga0307410_10171063 3300031852 Bacteria 1637
199 Ga0307406_10030641 3300031901 Bacteria 3268
200 Ga0307406_10031315 3300031901 Bacteria 3238
201 Ga0307407_10023507 3300031903 Bacteria 3217
202 Ga0307412_10089017 3300031911 Bacteria 2155
203 Ga0307412_10127461 3300031911 Bacteria 1843
204 Ga0307409_100003131 3300031995 Bacteria 8885
205 Ga0307409_100017012 3300031995 Bacteria 4833
206 Ga0307409_100028679 3300031995 Bacteria 3970
207 Ga0307409_100055994 3300031995 Bacteria 3048
208 Ga0307416_100014990 3300032002 Bacteria 5336
209 Ga0307416_100082882 3300032002 Bacteria 2718
210 Ga0307416_100210684 3300032002 Bacteria 1853
211 Ga0307414_10027187 3300032004 Bacteria 3694
212 Ga0307414_10059928 3300032004 Bacteria 2690
213 Ga0307414_10108177 3300032004 Bacteria 2108
214 Ga0307414_10129006 3300032004 Bacteria 1959
215 Ga0307411_10003050 3300032005 Bacteria 7652
216 Ga0307411_10043502 3300032005 Bacteria 2873
217 Ga0307411_10051118 3300032005 Bacteria 2695
218 Ga0307411_10109618 3300032005 Bacteria 1972
219 Ga0307415_100000166 3300032126 Bacteria 29307
220 Ga0307415_100040788 3300032126 Bacteria 3078
221 Ga0307415_100191205 3300032126 Bacteria 1615
222 Ga0307415_100223383 3300032126 Bacteria 1511
223 Ga0307510_10115606 3300033180 Bacteria 2407
224 Ga0395899_0000582 3300037312 Bacteria 38446
225 Ga0395900_0001617 3300037418 Bacteria 26505
226 Ga0395900_0002003 3300037418 Bacteria 22989
227 Ga0395900_0022861 3300037418 Bacteria 6397
228 Ga0395900_0043162 3300037418 Bacteria 4647
229 Ga0395900_0131173 3300037418 Bacteria 2568
230 Ga0395898_0001601 3300037466 Bacteria 30889
231 Ga0395898_0050534 3300037466 Bacteria 4068
232 Ga0395898_0097691 3300037466 Bacteria 2820
233 Ga0395905_0002381 3300037471 Bacteria 20935
234 Ga0395905_0003549 3300037471 Bacteria 16612
235 Ga0395905_0003631 3300037471 Bacteria 16392
236 Ga0395905_0004005 3300037471 Bacteria 15480
237 Ga0395905_0019055 3300037471 Bacteria 6508
238 Ga0395905_0022309 3300037471 Bacteria 5989
239 Ga0395905_0057226 3300037471 Bacteria 3647
240 Ga0395901_0000938 3300038443 Bacteria 31711
241 Ga0395901_0001383 3300038443 Bacteria 25376
242 Ga0395901_0002443 3300038443 Bacteria 18837
243 Ga0395901_0006322 3300038443 Bacteria 11995
244 Ga0395901_0043246 3300038443 Bacteria 4673
245 Ga0395901_0075396 3300038443 Bacteria 3519
246 Ga0395901_0075924 3300038443 Bacteria 3506
247 Ga0436361_0113625 3300039447 Bacteria 6153
248 Ga0436361_0307459 3300039447 Bacteria 5019
249 Ga0436361_0369234 3300039447 Bacteria 41959
250 Ga0436361_0486804 3300039447 Bacteria 5060
251 Ga0436361_1062691 3300039447 Bacteria 1914
252 Ga0436361_1194286 3300039447 Bacteria 6540
253 Ga0439445_0001893 3300042004 Bacteria 4612
254 Ga0451577_0208337 3300042876 Bacteria 1766
255 Ga0466967_0186176 3300045976 Bacteria 1960
256 Ga0495629_0023985 3300046459 Bacteria 4345
257 Ga0495638_0056522 3300046460 Bacteria 2435
258 Ga0495650_0000096 3300046471 Bacteria 217464
259 Ga0495584_0117813 3300046491 Bacteria 1344
260 Ga0495583_0000240 3300046506 Bacteria 90919
261 Ga0495583_0025831 3300046506 Bacteria 2926
262 Ga0495606_0000416 3300046507 Bacteria 71329
263 Ga0495606_0075049 3300046507 Bacteria 2116
264 Ga0495606_0088258 3300046507 Bacteria 1912
265 Ga0495631_0003018 3300046518 Bacteria 9317
266 Ga0495631_0062918 3300046518 Bacteria 1607
267 Ga0495643_0001616 3300046522 Bacteria 19958
268 Ga0495643_0002015 3300046522 Bacteria 16938
269 Ga0495643_0045703 3300046522 Bacteria 2376
270 Ga0495648_0003630 3300046524 Bacteria 13500
271 Ga0495663_0000980 3300046525 Bacteria 9447
272 Ga0495663_0002484 3300046525 Bacteria 5548
273 Ga0495663_0006604 3300046525 Bacteria 3200
274 Ga0495663_0010327 3300046525 Bacteria 2596
275 Ga0495642_0011685 3300046528 Bacteria 3379
276 Ga0495642_0027822 3300046528 Bacteria 2251
277 Ga0495587_0031901 3300046536 Bacteria 3188
278 Ga0495598_0000958 3300046537 Bacteria 5561
279 Ga0495621_0007039 3300046539 Bacteria 3313
280 Ga0495622_0003975 3300046557 Bacteria 6902
281 Ga0495633_0001055 3300046558 Bacteria 22426
282 Ga0495633_0002450 3300046558 Bacteria 13098
283 Ga0495668_0000098 3300046616 Bacteria 138553
284 Ga0495668_0097704 3300046616 Bacteria 1607
285 Ga0495611_0035964 3300046648 Bacteria 2195
286 Ga0495625_0027436 3300046660 Bacteria 4287
287 Ga0495669_0000026 3300046684 Bacteria 111814
288 Ga0495669_0003028 3300046684 Bacteria 6909
289 Ga0495670_0005253 3300046691 Bacteria 6371
290 Ga0495670_0024327 3300046691 Bacteria 2993
291 Ga0495670_0031991 3300046691 Bacteria 2615
292 Ga0495649_0031304 3300046694 Bacteria 2934
293 Ga0495600_0002961 3300046809 Bacteria 9903
294 Ga0495683_0007927 3300047323 Bacteria 5699
295 Ga0495683_0047764 3300047323 Bacteria 2147
296 Ga0495687_000123 3300047443 Bacteria 118577
297 Ga0495687_000171 3300047443 Bacteria 95996
298 Ga0495677_0003206 3300047445 Bacteria 6376
299 Ga0495677_0010995 3300047445 Bacteria 3316
300 Ga0495681_0018403 3300047470 Bacteria 3849
301 Ga0496102_0000092 3300048905 Bacteria 125879
302 Ga0496103_0000101 3300048906 Bacteria 93679
303 Ga0496104_0028724 3300048907 Bacteria 5155
304 Ga0496105_0000302 3300048908 Bacteria 32457
305 Ga0496105_0000998 3300048908 Bacteria 19544
306 Ga0496105_0075409 3300048908 Bacteria 2785
307 Ga0496108_0002338 3300048911 Bacteria 15186
308 Ga0496110_0004569 3300048913 Bacteria 10752
309 Ga0496110_0063610 3300048913 Bacteria 3260
310 Ga0496110_0077665 3300048913 Bacteria 2954
311 Ga0496111_0265531 3300048914 Bacteria 1273
312 Ga0496115_0000038 3300048918 Bacteria 125104
313 Ga0496116_0000627 3300048919 Bacteria 46393
314 Ga0496117_0000173 3300048920 Bacteria 133415
315 Ga0496118_0000131 3300048921 Bacteria 133116
316 Ga0496119_0004000 3300048922 Bacteria 14918
317 Ga0496120_0011317 3300048923 Bacteria 6142
318 Ga0496121_0000209 3300048924 Bacteria 129740
319 Ga0496122_0016717 3300048925 Bacteria 6914
320 Ga0496123_0053814 3300048926 Bacteria 2656
321 Ga0496124_0000166 3300048927 Bacteria 133634
322 Ga0496125_0000390 3300048928 Bacteria 81748
323 Ga0496125_0028281 3300048928 Bacteria 5068
324 Ga0496126_0000222 3300048929 Bacteria 123936
325 Ga0501070_0019388 3300049586 Bacteria 5703
326 Ga0501071_0161605 3300049587 Bacteria 1674
327 nmdc:mga03683_116_c1 3300050489 Bacteria 27362
328 nmdc:mga00v17_10856_c1 3300050491 Bacteria 4990
329 nmdc:mga0k408_1162_c1 3300050493 Bacteria 14407
330 nmdc:mga04h51_782_c1 3300050495 Bacteria 7372
331 nmdc:mga07m45_5_c2 3300050496 Bacteria 297012
332 nmdc:mga06r32_2711_c1 3300050510 Bacteria 15846
333 nmdc:mga0sz30_124_c1 3300050516 Bacteria 28901
334 Ga0500610_0000030 3300053079 Bacteria 51883
335 Ga0500595_009088 3300053119 Bacteria 4030
336 Ga0500607_000006 3300053121 Bacteria 136863
337 Ga0500607_000162 3300053121 Bacteria 57883
338 Ga0500642_0044057 3300053130 Bacteria 1941
339 Ga0500559_0060048 3300053136 Bacteria 1693
340 Ga0500616_0001975 3300053153 Bacteria 18211
341 Ga0500645_000045 3300053730 Bacteria 108141
342 Ga0500645_003689 3300053730 Bacteria 6109
343 2643730614 2643221541 Bacteria 5498788
344 2643820429 2643221560 Bacteria 4801179
345 2644037969 2643221605 Bacteria 4772303
346 2644043783 2643221606 Bacteria 5588032
347 2644393942 2643221671 Bacteria 5496681
348 2990268614 2990265787 Bacteria 3943888
349 2993694680 2993693658 Bacteria 4040749
350 639787723 639633007 Bacteria 4376040
351 8057102469 8057101203 Bacteria 5034064
352 Ga0307405_10182208
353 JGI24740J21852_10001248
354 JGI24737J22298_10003513
355 JGI24748J21848_1001177
356 JGI24751J29686_10000046
357 JGI25153J46596_10000065
358 Ga0055525_1000058
359 Ga0055542_1000041
360 Ga0055529_1000040
361 Ga0065165_1000987
362 Ga0065715_10000622
363 Ga0070658_10000979
364 Ga0070658_10003718
365 Ga0070676_10005027
366 Ga0070670_100000006
367 Ga0070670_100000445
368 Ga0070670_100076914
369 Ga0070670_100077882
370 Ga0070670_100180388
371 Ga0070670_100267239
372 Ga0070677_10007017
373 Ga0070660_100018038
374 Ga0070661_100005011
375 Ga0070661_100079031
376 Ga0070661_100134418
377 Ga0070668_100029728
378 Ga0070669_100000102
379 Ga0070669_100007049
380 Ga0070669_100061737
381 Ga0070669_100112549
382 Ga0070675_100226423
383 Ga0070671_100014139
384 Ga0070671_100031368
385 Ga0070673_100021538
386 Ga0070673_100048203
387 Ga0070673_100072994
388 Ga0070659_100057906
389 Ga0070667_100002840
390 Ga0070667_100008721
391 Ga0070667_100015297
392 Ga0070700_100124767
393 Ga0070663_100004725
394 Ga0070678_100003471
395 Ga0070662_100002527
396 Ga0070662_100053944
397 Ga0070662_100192705
398 Ga0070697_100177451
399 Ga0068853_100006005
400 Ga0068853_100075570
401 Ga0070672_100000401
402 Ga0070672_100009738
403 Ga0070672_100088820
404 Ga0070672_100114978
405 Ga0070665_100000103
406 Ga0070665_100100988
407 Ga0068855_100050254
408 Ga0070664_100028322
409 Ga0068857_100011403
410 Ga0068857_100013064
411 Ga0068854_100053778
412 Ga0068854_100054295
413 Ga0068859_100009002
414 Ga0068859_100057353
415 Ga0068864_100000014
416 Ga0068864_100008242
417 Ga0068864_100115346
418 Ga0068861_100006194
419 Ga0068863_100004402
420 Ga0068863_100007329
421 Ga0068863_100039239
422 Ga0068858_100017540
423 Ga0068858_100051690
424 Ga0068860_100000076
425 Ga0068862_100000007
426 Ga0068862_100009358
427 Ga0075365_10001694
428 Ga0075368_10009379
429 Ga0075363_100002091
430 Ga0075362_10003744
431 Ga0075367_10002755
432 Ga0075369_10005536
433 Ga0075366_10000499
434 Ga0075366_10061024
435 Ga0075431_100102616
436 Ga0097620_100009002
437 Ga0097620_100057351
438 Ga0105243_10000608
439 Ga0105241_10046687
440 Ga0105242_10164762
441 Ga0105248_10000139
442 Ga0105248_10107756
443 Ga0105246_10061572
444 Ga0157371_10000148
445 Ga0157374_10038803
446 Ga0163162_10009605
447 Ga0163162_10024334
448 Ga0157375_10040235
449 Ga0157375_10152304
450 Ga0163163_10030080
451 Ga0163163_10031692
452 Ga0157380_10000014
453 Ga0157380_10001552
454 Ga0157380_10007717
455 Ga0157380_10029916
456 Ga0157377_10040774
457 Ga0163161_10006778
458 Ga0163161_10130881
459 Ga0213872_10020063
460 Ga0213872_10051554
461 Ga0209563_100024
462 Ga0209677_104630
463 Ga0209148_1000008
464 Ga0209455_1000002
465 Ga0209758_1000007
466 Ga0207656_10053567
467 Ga0207682_10001078
468 Ga0207680_10106098
469 Ga0207680_10146316
470 Ga0207647_10006139
471 Ga0207705_10000127
472 Ga0207654_10000291
473 Ga0207695_10024890
474 Ga0207671_10009598
475 Ga0207657_10042301
476 Ga0207657_10051753
477 Ga0207649_10000332
478 Ga0207649_10016604
479 Ga0207681_10000001
480 Ga0207681_10017068
481 Ga0207681_10099955
482 Ga0207694_10029590
483 Ga0207650_10000023
484 Ga0207650_10003823
485 Ga0207650_10004333
486 Ga0207650_10043115
487 Ga0207659_10075416
488 Ga0207644_10011523
489 Ga0207644_10043022
490 Ga0207644_10108184
491 Ga0207690_10002126
492 Ga0207706_10000564
493 Ga0207706_10016533
494 Ga0207706_10036808
495 Ga0207706_10081383
496 Ga0207706_10103690
497 Ga0207709_10000109
498 Ga0207669_10000048
499 Ga0207691_10000442
500 Ga0207691_10002386
501 Ga0207691_10133619
502 Ga0207711_10007104
503 Ga0207667_10000074
504 Ga0207667_10041313
505 Ga0207651_10009059
506 Ga0207651_10038155
507 Ga0207668_10002438
508 Ga0207668_10008805
509 Ga0207668_10042236
510 Ga0207668_10069737
511 Ga0207640_10017671
512 Ga0207640_10043069
513 Ga0207658_10001966
514 Ga0207703_10007045
515 Ga0207703_10038108
516 Ga0207639_10000169
517 Ga0207639_10001405
518 Ga0207678_10002889
519 Ga0207678_10101572
520 Ga0207708_10085010
521 Ga0207702_10003415
522 Ga0207641_10000125
523 Ga0207641_10016796
524 Ga0207676_10000017
525 Ga0207676_10006461
526 Ga0207674_10000057
527 Ga0207674_10009587
528 Ga0207674_10054685
529 Ga0207675_100010457
530 Ga0207683_10013646
531 Ga0207698_10001683
532 Ga0207698_10203348
533 Ga0209813_10000155
534 Ga0268266_10000002
535 Ga0268266_10012574
536 Ga0268266_10025348
537 Ga0268265_10000002
538 Ga0268265_10006309
539 Ga0268264_10000139
540 Ga0268264_10081401
541 Ga0307513_10054338
542 Ga0307408_100149382
543 Ga0307413_10026294
544 Ga0307413_10035988
545 Ga0307413_10058416
546 Ga0307413_10131750
547 Ga0307410_10001826
548 Ga0307410_10036830
549 Ga0307410_10171063
550 Ga0307406_10030641
551 Ga0307406_10031315
552 Ga0307407_10023507
553 Ga0307412_10089017
554 Ga0307412_10127461
555 Ga0307409_100003131
556 Ga0307409_100017012
557 Ga0307409_100028679
558 Ga0307409_100055994
559 Ga0307416_100014990
560 Ga0307416_100082882
561 Ga0307416_100210684
562 Ga0307414_10027187
563 Ga0307414_10059928
564 Ga0307414_10108177
565 Ga0307414_10129006
566 Ga0307411_10003050
567 Ga0307411_10043502
568 Ga0307411_10051118
569 Ga0307411_10109618
570 Ga0307415_100000166
571 Ga0307415_100040788
572 Ga0307415_100191205
573 Ga0307415_100223383
574 Ga0307510_10115606
575 Ga0395899_0000582
576 Ga0395900_0001617
577 Ga0395900_0002003
578 Ga0395900_0022861
579 Ga0395900_0043162
580 Ga0395900_0131173
581 Ga0395898_0001601
582 Ga0395898_0050534
583 Ga0395898_0097691
584 Ga0395905_0002381
585 Ga0395905_0003549
586 Ga0395905_0003631
587 Ga0395905_0004005
588 Ga0395905_0019055
589 Ga0395905_0022309
590 Ga0395905_0057226
591 Ga0395901_0000938
592 Ga0395901_0001383
593 Ga0395901_0002443
594 Ga0395901_0006322
595 Ga0395901_0043246
596 Ga0395901_0075396
597 Ga0395901_0075924
598 Ga0436361_0113625
599 Ga0436361_0307459
600 Ga0436361_0369234
601 Ga0436361_0486804
602 Ga0436361_1062691
603 Ga0436361_1194286
604 Ga0439445_0001893
605 Ga0451577_0208337
606 Ga0466967_0186176
607 Ga0495629_0023985
608 Ga0495638_0056522
609 Ga0495650_0000096
610 Ga0495584_0117813
611 Ga0495583_0000240
612 Ga0495583_0025831
613 Ga0495606_0000416
614 Ga0495606_0075049
615 Ga0495606_0088258
616 Ga0495631_0003018
617 Ga0495631_0062918
618 Ga0495643_0001616
619 Ga0495643_0002015
620 Ga0495643_0045703
621 Ga0495648_0003630
622 Ga0495663_0000980
623 Ga0495663_0002484
624 Ga0495663_0006604
625 Ga0495663_0010327
626 Ga0495642_0011685
627 Ga0495642_0027822
628 Ga0495587_0031901
629 Ga0495598_0000958
630 Ga0495621_0007039
631 Ga0495622_0003975
632 Ga0495633_0001055
633 Ga0495633_0002450
634 Ga0495668_0000098
635 Ga0495668_0097704
636 Ga0495611_0035964
637 Ga0495625_0027436
638 Ga0495669_0000026
639 Ga0495669_0003028
640 Ga0495670_0005253
641 Ga0495670_0024327
642 Ga0495670_0031991
643 Ga0495649_0031304
644 Ga0495600_0002961
645 Ga0495683_0007927
646 Ga0495683_0047764
647 Ga0495687_000123
648 Ga0495687_000171
649 Ga0495677_0003206
650 Ga0495677_0010995
651 Ga0495681_0018403
652 Ga0496102_0000092
653 Ga0496103_0000101
654 Ga0496104_0028724
655 Ga0496105_0000302
656 Ga0496105_0000998
657 Ga0496105_0075409
658 Ga0496108_0002338
659 Ga0496110_0004569
660 Ga0496110_0063610
661 Ga0496110_0077665
662 Ga0496111_0265531
663 Ga0496115_0000038
664 Ga0496116_0000627
665 Ga0496117_0000173
666 Ga0496118_0000131
667 Ga0496119_0004000
668 Ga0496120_0011317
669 Ga0496121_0000209
670 Ga0496122_0016717
671 Ga0496123_0053814
672 Ga0496124_0000166
673 Ga0496125_0000390
674 Ga0496125_0028281
675 Ga0496126_0000222
676 Ga0501070_0019388
677 Ga0501071_0161605
678 nmdc:mga03683_116_c1
679 nmdc:mga00v17_10856_c1
680 nmdc:mga0k408_1162_c1
681 nmdc:mga04h51_782_c1
682 nmdc:mga07m45_5_c2
683 nmdc:mga06r32_2711_c1
684 nmdc:mga0sz30_124_c1
685 Ga0500610_0000030
686 Ga0500595_009088
687 Ga0500607_000006
688 Ga0500607_000162
689 Ga0500642_0044057
690 Ga0500559_0060048
691 Ga0500616_0001975
692 Ga0500645_000045
693 Ga0500645_003689
694 2643730614
695 2643820429
696 2644037969
697 2644043783
698 2644393942
699 2990268614
700 2993694680
701 639787723
702 8057102469

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

85

140

0.94

PF13437

HlyD_3

HlyD family secretion protein

196

308

0.81

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

77

311

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5c22-assembly4.cif.gz_D crystal structure of zn-bound hlyd from e. coli 0.8698 82 110
1vf7-assembly1.cif.gz_M crystal structure of the membrane fusion protein, mexa of the multidrug transporter 0.7968 70 242
4hnv-assembly1.cif.gz_A crystal structure of r54e mutant of s. aureus pyruvate carboxylase 0.7929 83 158
3hbl-assembly1.cif.gz_B crystal structure of s. aureus pyruvate carboxylase t908a mutant 0.792 83 158
2f1m-assembly2.cif.gz_C conformational flexibility in the multidrug efflux system protein acra 0.7845 70 242
ID Description Score Start End Superfamily
3ne5C01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.9047 251 311 2.40.420.20
3lnnA01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.9003 247 305 2.40.420.20
3oocA01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.8916 251 307 2.40.420.20
af_P77239_320_407_2.40.420.20 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.8841 246 310 2.40.420.20
2v4dB01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.881 250 320 2.40.420.20
ID Description Score Start End GO Terms
AF-A0A3B0WKP4-F1-model_v4 RND efflux system, membrane fusion protein 0.9623 250 318 GO:0005886
GO:0046677
AF-A0A1C2FZT6-F1-model_v4 Uncharacterized protein 0.8991 250 319
AF-A0A7W6T0E9-F1-model_v4 RND family efflux transporter MFP subunit 0.8299 57 322 GO:0005886
GO:0022857
GO:0030313
GO:0046677
AF-A0A2E3LXG7-F1-model_v4 Efflux transporter periplasmic adaptor subunit 0.8253 50 323 GO:0005886
GO:0022857
GO:0046677
AF-A0A3M2A628-F1-model_v4 Efflux RND transporter periplasmic adaptor subunit 0.8139 50 323 GO:0005886
GO:0022857
GO:0030313
GO:0046677

Map