F417727

General Info

Members Datasets Scaffolds Average Seq Length
348 207 322 459

Family's Representative Sequence

Representative Sequence 3300053156|Ga0500622_0002927|Ga0500622_0002927_3820_5352
Length 510
Sequence LSVLTGQKYLFLSKIKEMARVSNPFLNLSEMAELPLSLGAKIKSSAMSKYDLIVIGSGPGGYVAAIRASQLGMKVGVVEKAEIGGICLNWGCIPTKALLKSANVFEYIKHAKDYGVEVKGDFKADLPGMVKRSRDVAASNSKGVQFLFKKNKIDLIEGYGKIKKGGKVEVTDKAGKKVEYEAKHTILATGGRSRELPSMKIDGKKIIGYREAMILENVPKKLLVVGSGAIGVEFAYFYNSIGTEVTIVEFLPRIVPVEDEEVSKTLDKIFKKDGMKIYVNSEVTKVDTAGAGCVATVKTPDGEIKIESDIVLSAVGVATNLENIGLEEVGVKIEKGKVVVDDFYRTNVPGVYAIGDIVKGQALAHVASAEGIICVENIAGKKPEPLNYNNIPGCTYCTPEIASVGYTEEGAKKAGYEIKVGKFPFSASGKAKAAGATDGFVKVIFDAKYGEWLGAHFIGANVTEMIAEVVTARKLETTGHEIIKSVHPHPTMSEAVMEAAAAAYGEVIHI

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2738541284 Pedobacter sp. YR016 Isolate Unclassified
4 2738543023 Pedobacter sp. OK628 Isolate Unclassified
5 2739367651 Pedobacter sp. OK291 Isolate Unclassified
6 2739367656 Pedobacter sp. CF523 Isolate Unclassified
7 2739367663 Pedobacter sp. YR510 Isolate Unclassified
8 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
9 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
10 2818991437 Pedobacter terrae 518 Isolate Unclassified
11 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
12 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
13 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
14 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
15 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
16 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
17 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
18 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
19 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
20 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
21 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
22 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
23 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
24 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
25 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
26 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
27 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
28 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
29 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
30 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
31 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
32 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
33 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
34 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
35 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
36 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
37 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
38 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
39 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
40 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
41 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
42 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
43 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
44 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
45 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
46 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
47 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
48 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
49 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
50 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
51 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
52 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
53 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
54 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
55 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
56 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
57 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
58 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
59 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
60 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
61 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
62 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
63 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
64 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
65 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
66 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
67 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
68 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
69 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
70 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
71 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
72 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
73 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
74 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
75 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
76 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
77 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
78 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
79 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
80 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
81 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
82 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
83 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
84 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
85 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
86 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
87 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
88 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
89 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
90 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
91 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
92 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
93 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
94 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
95 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
96 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
97 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
98 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
99 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
100 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
101 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
102 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
103 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
106 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
132 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
134 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
135 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
136 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
137 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
138 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
139 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
140 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
141 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
142 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
143 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
144 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
145 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
146 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
147 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
148 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
149 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
150 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
151 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
152 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
153 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
154 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
155 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
156 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
157 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
158 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
159 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
160 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
161 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
162 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
163 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
164 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
165 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
166 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
167 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
168 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
169 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
170 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
171 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
172 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
173 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
174 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
175 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
176 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
177 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
178 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
179 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
180 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
181 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
182 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
183 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
184 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
185 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
186 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
187 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
194 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
196 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
197 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
198 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
199 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
202 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
203 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
204 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
205 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
206 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
207 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.53
Metatranscriptomes 0
Isolates 7.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.2
Nodule 0
Rhizoplane 0
Rhizosphere 80.46
Stem 0
Stem Tuber 0
Unclassified 10.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3941560 2162886007 Bacteria 12570
2 JGI24735J21928_10008197 3300002067 Bacteria 3389
3 JGI24744J21845_10000148 3300002077 Bacteria 10160
4 JGI25162J39368_1000161 3300002737 Bacteria 74216
5 JGI25162J39368_1001026 3300002737 Bacteria 17284
6 JGI25157J39369_1003396 3300002741 Bacteria 3276
7 JGI25152J39213_1000067 3300002773 Bacteria 68480
8 JGI25150J39212_1000001 3300002774 Bacteria 1318726
9 JGI25151J46595_10000005 3300003187 Bacteria 431598
10 JGI25165J46597_1000694 3300003214 Bacteria 26947
11 JGI25153J46596_10000040 3300003215 Bacteria 165523
12 rootH1_10003356 3300003316 Bacteria 6012
13 rootH1_10051066 3300003316 Bacteria 8889
14 rootH2_10001134 3300003320 Bacteria 40015
15 rootH2_10004703 3300003320 Bacteria 11822
16 rootL2_10002860 3300003322 Bacteria 11460
17 rootL2_10038362 3300003322 Bacteria 5694
18 rootL2_10048867 3300003322 Bacteria 9459
19 rootL2_10110070 3300003322 Bacteria 8297
20 rootH1_10003699 3300003323 Bacteria 25103
21 rootH1_10020300 3300003323 Bacteria 21210
22 rootH1_10044222 3300003323 Bacteria 6393
23 rootH1_10060952 3300003323 Bacteria 26024
24 rootH1_10066792 3300003323 Bacteria 4388
25 rootH1_10095939 3300003323 Bacteria 6339
26 Ga0055530_10000622 3300003791 Bacteria 30682
27 Ga0055531_10000018 3300003794 Bacteria 175214
28 Ga0065165_1001340 3300005262 Bacteria 27256
29 Ga0065714_10002487 3300005288 Bacteria 18379
30 Ga0065714_10003240 3300005288 Bacteria 21373
31 Ga0065714_10075980 3300005288 Bacteria 2834
32 Ga0070658_10000857 3300005327 Bacteria 25975
33 Ga0070658_10132563 3300005327 Bacteria 2077
34 Ga0070676_10000187 3300005328 Bacteria 25771
35 Ga0070683_100001919 3300005329 Bacteria 16271
36 Ga0068869_100196899 3300005334 Bacteria 1587
37 Ga0070660_100011681 3300005339 Bacteria 6252
38 Ga0070671_100005898 3300005355 Bacteria 9762
39 Ga0070673_100009864 3300005364 Bacteria 6433
40 Ga0070673_100055226 3300005364 Bacteria 3128
41 Ga0070659_100000242 3300005366 Bacteria 42847
42 Ga0070659_100010662 3300005366 Bacteria 6768
43 Ga0070659_100014366 3300005366 Bacteria 5916
44 Ga0070708_100000859 3300005445 Bacteria 22877
45 Ga0070678_100001486 3300005456 Bacteria 12520
46 Ga0070662_100000011 3300005457 Bacteria 133652
47 Ga0070681_10012638 3300005458 Bacteria 8375
48 Ga0068867_100000770 3300005459 Bacteria 21597
49 Ga0070706_100080499 3300005467 Bacteria 3017
50 Ga0070707_100089561 3300005468 Bacteria 2978
51 Ga0070679_100005905 3300005530 Bacteria 11374
52 Ga0068853_100020524 3300005539 Bacteria 5495
53 Ga0070686_100083230 3300005544 Bacteria 2124
54 Ga0070665_100000003 3300005548 Bacteria 811857
55 Ga0070665_100139402 3300005548 Bacteria 2429
56 Ga0068855_100000988 3300005563 Bacteria 35353
57 Ga0068855_100076421 3300005563 Bacteria 3887
58 Ga0068854_100040982 3300005578 Bacteria 3270
59 Ga0068856_100001307 3300005614 Bacteria 26219
60 Ga0068856_100018613 3300005614 Bacteria 6731
61 Ga0068856_100055971 3300005614 Bacteria 3892
62 Ga0068852_100018545 3300005616 Bacteria 5484
63 Ga0068866_10017685 3300005718 Bacteria 3210
64 Ga0068851_10000899 3300005834 Bacteria 12807
65 Ga0097621_100000485 3300006237 Bacteria 27776
66 Ga0068871_100004975 3300006358 Bacteria 9283
67 Ga0075428_100086086 3300006844 Bacteria 3427
68 Ga0068865_100000563 3300006881 Bacteria 20661
69 Ga0105240_10000074 3300009093 Bacteria 199611
70 Ga0105240_10000126 3300009093 Bacteria 157403
71 Ga0105240_10007219 3300009093 Bacteria 16181
72 Ga0105240_10018847 3300009093 Bacteria 9241
73 Ga0105240_10104810 3300009093 Bacteria 3434
74 Ga0105240_10105032 3300009093 Bacteria 3429
75 Ga0105240_10144691 3300009093 Bacteria 2838
76 Ga0111539_10008032 3300009094 Bacteria 13458
77 Ga0111539_10018146 3300009094 Bacteria 8715
78 Ga0105241_10001542 3300009174 Bacteria 17671
79 Ga0105241_10007620 3300009174 Bacteria 7955
80 Ga0105241_10062457 3300009174 Bacteria 2872
81 Ga0105242_10034366 3300009176 Bacteria 4064
82 Ga0105237_10001772 3300009545 Bacteria 27889
83 Ga0105237_10003315 3300009545 Bacteria 19173
84 Ga0105237_10008127 3300009545 Bacteria 11392
85 Ga0105238_10142302 3300009551 Bacteria 2375
86 Ga0105249_10214193 3300009553 Bacteria 1892
87 Ga0105239_10000002 3300010375 Bacteria 610298
88 Ga0105239_10008178 3300010375 Bacteria 11931
89 Ga0105239_10008651 3300010375 Bacteria 11537
90 Ga0105239_10049533 3300010375 Bacteria 4606
91 Ga0105239_10078886 3300010375 Bacteria 3623
92 Ga0105239_10082976 3300010375 Bacteria 3529
93 Ga0157373_10000031 3300013100 Bacteria 126446
94 Ga0157373_10000904 3300013100 Bacteria 23004
95 Ga0157373_10007070 3300013100 Bacteria 8367
96 Ga0157373_10009100 3300013100 Bacteria 7346
97 Ga0157373_10058313 3300013100 Bacteria 2737
98 Ga0157371_10000216 3300013102 Bacteria 83975
99 Ga0157371_10003250 3300013102 Bacteria 14907
100 Ga0157371_10005899 3300013102 Bacteria 10233
101 Ga0157371_10015179 3300013102 Bacteria 5784
102 Ga0157371_10016094 3300013102 Bacteria 5591
103 Ga0157370_10015705 3300013104 Bacteria 7690
104 Ga0157370_10027966 3300013104 Bacteria 5553
105 Ga0157370_10072109 3300013104 Bacteria 3259
106 Ga0157369_10000004 3300013105 Bacteria 479764
107 Ga0157369_10058906 3300013105 Bacteria 4142
108 Ga0157369_10245701 3300013105 Bacteria 1868
109 Ga0157374_10000647 3300013296 Bacteria 30685
110 Ga0157374_10001424 3300013296 Bacteria 20239
111 Ga0157378_10013537 3300013297 Bacteria 7135
112 Ga0157378_10074945 3300013297 Bacteria 3045
113 Ga0163162_10000024 3300013306 Bacteria 188515
114 Ga0163162_10001864 3300013306 Bacteria 19846
115 Ga0163162_10025043 3300013306 Bacteria 5896
116 Ga0157372_10000011 3300013307 Bacteria 277202
117 Ga0157372_10000196 3300013307 Bacteria 66430
118 Ga0157372_10000462 3300013307 Bacteria 44685
119 Ga0157372_10056522 3300013307 Bacteria 4384
120 Ga0157375_10007138 3300013308 Bacteria 9762
121 Ga0157375_10041540 3300013308 Bacteria 4441
122 Ga0157375_10083527 3300013308 Bacteria 3239
123 Ga0157375_10128626 3300013308 Bacteria 2651
124 Ga0157375_10131915 3300013308 Bacteria 2618
125 Ga0157380_10016321 3300014326 Bacteria 5475
126 Ga0182008_10000008 3300014497 Bacteria 371823
127 Ga0182008_10000384 3300014497 Bacteria 34275
128 Ga0182008_10033410 3300014497 Bacteria 2581
129 Ga0182006_1000164 3300015261 Bacteria 70337
130 Ga0182006_1000335 3300015261 Bacteria 40157
131 Ga0182007_10000027 3300015262 Bacteria 167235
132 Ga0182007_10022918 3300015262 Bacteria 2200
133 Ga0183373_1003 3300015682 Bacteria 558813
134 Ga0163161_10002252 3300017792 Bacteria 13847
135 Ga0163161_10079526 3300017792 Bacteria 2411
136 Ga0207427_100337 3300025231 Bacteria 31041
137 Ga0209437_100008 3300025233 Bacteria 921142
138 Ga0209437_100077 3300025233 Bacteria 286656
139 Ga0207425_1000002 3300025245 Bacteria 1362590
140 Ga0209026_1000219 3300025250 Bacteria 78822
141 Ga0209026_1001469 3300025250 Bacteria 10409
142 Ga0209129_1000002 3300025258 Bacteria 1359086
143 Ga0209129_1007942 3300025258 Bacteria 3042
144 Ga0209233_1000024 3300025261 Bacteria 695418
145 Ga0209233_1000396 3300025261 Bacteria 36455
146 Ga0209676_1000042 3300025292 Bacteria 424130
147 Ga0209025_1000004 3300025294 Bacteria 1361782
148 Ga0209758_1000006 3300025297 Bacteria 1359562
149 Ga0209050_1000035 3300025298 Bacteria 424005
150 Ga0209050_1011238 3300025298 Bacteria 4280
151 Ga0209257_1000299 3300025304 Bacteria 108881
152 Ga0207656_10000328 3300025321 Bacteria 16248
153 Ga0207642_10062201 3300025899 Bacteria 1740
154 Ga0207647_10000104 3300025904 Bacteria 65696
155 Ga0207647_10002305 3300025904 Bacteria 14535
156 Ga0207645_10000758 3300025907 Bacteria 26866
157 Ga0207654_10002598 3300025911 Bacteria 9164
158 Ga0207654_10055407 3300025911 Bacteria 2295
159 Ga0207707_10006352 3300025912 Bacteria 10323
160 Ga0207695_10000013 3300025913 Bacteria 821265
161 Ga0207695_10012585 3300025913 Bacteria 10139
162 Ga0207695_10035902 3300025913 Bacteria 5366
163 Ga0207695_10066377 3300025913 Bacteria 3705
164 Ga0207695_10078483 3300025913 Bacteria 3349
165 Ga0207671_10001410 3300025914 Bacteria 27940
166 Ga0207671_10009882 3300025914 Bacteria 7931
167 Ga0207671_10011832 3300025914 Bacteria 7061
168 Ga0207671_10013966 3300025914 Bacteria 6372
169 Ga0207657_10056325 3300025919 Bacteria 3392
170 Ga0207652_10090977 3300025921 Bacteria 2682
171 Ga0207694_10086094 3300025924 Bacteria 2474
172 Ga0207644_10027277 3300025931 Bacteria 3945
173 Ga0207690_10001885 3300025932 Bacteria 12869
174 Ga0207690_10006778 3300025932 Bacteria 6791
175 Ga0207690_10063739 3300025932 Bacteria 2514
176 Ga0207706_10003796 3300025933 Bacteria 14400
177 Ga0207686_10031029 3300025934 Bacteria 3170
178 Ga0207704_10000041 3300025938 Bacteria 89976
179 Ga0207667_10001052 3300025949 Bacteria 35129
180 Ga0207667_10249935 3300025949 Bacteria 1814
181 Ga0207639_10013566 3300026041 Bacteria 5708
182 Ga0207639_10101043 3300026041 Bacteria 2331
183 Ga0207678_10040315 3300026067 Bacteria 4051
184 Ga0207702_10003684 3300026078 Bacteria 13868
185 Ga0207702_10051034 3300026078 Bacteria 3494
186 Ga0207674_10180718 3300026116 Bacteria 2061
187 Ga0207683_10008127 3300026121 Bacteria 8974
188 Ga0207698_10001917 3300026142 Bacteria 12194
189 Ga0207428_10034700 3300027907 Bacteria 4130
190 Ga0207428_10050176 3300027907 Bacteria 3340
191 Ga0268266_10000380 3300028379 Bacteria 67791
192 Ga0265337_1000192 3300028556 Bacteria 32259
193 Ga0265326_10001006 3300028558 Bacteria 10109
194 Ga0265326_10010704 3300028558 Bacteria 2718
195 Ga0265319_1000267 3300028563 Bacteria 39440
196 Ga0265319_1000476 3300028563 Bacteria 28273
197 Ga0265334_10001728 3300028573 Bacteria 10438
198 Ga0265334_10026020 3300028573 Bacteria 2365
199 Ga0265323_10000026 3300028653 Bacteria 81286
200 Ga0265323_10000040 3300028653 Bacteria 70373
201 Ga0265322_10000471 3300028654 Bacteria 16129
202 Ga0265336_10000102 3300028666 Bacteria 64995
203 Ga0307517_10002409 3300028786 Bacteria 29976
204 Ga0307517_10003658 3300028786 Bacteria 23904
205 Ga0307515_10000133 3300028794 Bacteria 176091
206 Ga0307515_10083460 3300028794 Bacteria 4118
207 Ga0307515_10114927 3300028794 Bacteria 3106
208 Ga0265338_10000250 3300028800 Bacteria 98449
209 Ga0265338_10001401 3300028800 Bacteria 39264
210 Ga0265338_10003829 3300028800 Bacteria 20898
211 Ga0265338_10013159 3300028800 Bacteria 9368
212 Ga0265324_10000661 3300029957 Bacteria 23256
213 Ga0265324_10011328 3300029957 Bacteria 3401
214 Ga0265330_10000231 3300031235 Bacteria 42305
215 Ga0265332_10004802 3300031238 Bacteria 6292
216 Ga0265320_10000274 3300031240 Bacteria 42388
217 Ga0265320_10000935 3300031240 Bacteria 21756
218 Ga0265320_10045203 3300031240 Bacteria 2165
219 Ga0265325_10003693 3300031241 Bacteria 9906
220 Ga0265329_10005765 3300031242 Bacteria 4973
221 Ga0265340_10005093 3300031247 Bacteria 7313
222 Ga0265340_10005627 3300031247 Bacteria 6941
223 Ga0265339_10000148 3300031249 Bacteria 57410
224 Ga0265331_10002549 3300031250 Bacteria 12248
225 Ga0265327_10035074 3300031251 Bacteria 2778
226 Ga0265327_10056016 3300031251 Bacteria 2033
227 Ga0265316_10000342 3300031344 Bacteria 52382
228 Ga0265316_10000582 3300031344 Bacteria 40889
229 Ga0265316_10009822 3300031344 Bacteria 8783
230 Ga0265316_10022930 3300031344 Bacteria 5252
231 Ga0265316_10064151 3300031344 Bacteria 2846
232 Ga0307509_10066138 3300031507 Unclassified 3794
233 Ga0307408_100002357 3300031548 Bacteria 13330
234 Ga0307408_100002945 3300031548 Bacteria 11795
235 Ga0265313_10012108 3300031595 Bacteria 5308
236 Ga0265314_10000812 3300031711 Bacteria 37088
237 Ga0265342_10000222 3300031712 Bacteria 64396
238 Ga0265342_10007337 3300031712 Bacteria 8089
239 Ga0307405_10000008 3300031731 Bacteria 264953
240 Ga0307407_10000056 3300031903 Bacteria 49331
241 Ga0307412_10000009 3300031911 Bacteria 445987
242 Ga0307409_100119566 3300031995 Bacteria 2228
243 Ga0307416_100000048 3300032002 Bacteria 120194
244 Ga0307416_100054525 3300032002 Bacteria 3214
245 Ga0307414_10001974 3300032004 Bacteria 10628
246 Ga0307414_10010292 3300032004 Bacteria 5418
247 Ga0307414_10087897 3300032004 Bacteria 2298
248 Ga0307414_10104627 3300032004 Bacteria 2138
249 Ga0307414_10110082 3300032004 Bacteria 2094
250 Ga0307415_100007392 3300032126 Bacteria 6007
251 Ga0307510_10057557 3300033180 Bacteria 4033
252 Ga0373927_0022323 3300035695 Bacteria 4146
253 Ga0316582_0017888 3300036647 Bacteria 4111
254 Ga0395899_0000304 3300037312 Bacteria 63178
255 Ga0395899_0016929 3300037312 Bacteria 5557
256 Ga0395900_0000014 3300037418 Bacteria 386513
257 Ga0395900_0002301 3300037418 Bacteria 21221
258 Ga0395898_0006177 3300037466 Bacteria 12833
259 Ga0395905_0000003 3300037471 Bacteria 1347396
260 Ga0395905_0000241 3300037471 Bacteria 82847
261 Ga0395905_0025378 3300037471 Bacteria 5589
262 Ga0395901_0000582 3300038443 Bacteria 42425
263 Ga0436361_0971561 3300039447 Bacteria 11520
264 Ga0439448_0001454 3300042005 Bacteria 6137
265 Ga0451577_0001334 3300042876 Bacteria 33535
266 Ga0451577_0007012 3300042876 Bacteria 11116
267 Ga0451577_0008149 3300042876 Bacteria 10221
268 Ga0451577_0128557 3300042876 Bacteria 2272
269 Ga0453683_0015899 3300044673 Bacteria 4863
270 Ga0453683_0039818 3300044673 Bacteria 2952
271 Ga0453684_0000004 3300044712 Bacteria 1469893
272 Ga0453684_0001660 3300044712 Bacteria 60336
273 Ga0453684_0002144 3300044712 Bacteria 49481
274 Ga0453684_0003330 3300044712 Bacteria 36457
275 Ga0453684_0006267 3300044712 Bacteria 22777
276 Ga0453684_0014621 3300044712 Bacteria 12527
277 Ga0453684_0015358 3300044712 Bacteria 12127
278 Ga0453684_0157586 3300044712 Bacteria 2690
279 Ga0453684_0198454 3300044712 Bacteria 2341
280 Ga0453684_0211811 3300044712 Bacteria 2252
281 Ga0466959_0083458 3300045049 Bacteria 2301
282 Ga0451576_0000020 3300045051 Bacteria 529568
283 Ga0451576_0002056 3300045051 Bacteria 31658
284 Ga0451576_0007238 3300045051 Bacteria 13361
285 Ga0451576_0011975 3300045051 Bacteria 9798
286 Ga0451576_0031652 3300045051 Bacteria 5638
287 Ga0451576_0034828 3300045051 Bacteria 5346
288 Ga0451576_0057571 3300045051 Bacteria 4063
289 Ga0451576_0124640 3300045051 Bacteria 2684
290 Ga0466958_0033531 3300045836 Bacteria 3060
291 Ga0495638_0000001 3300046460 Bacteria 1114121
292 Ga0495610_0000233 3300046512 Bacteria 59298
293 Ga0495610_0001814 3300046512 Bacteria 18564
294 Ga0495631_0003516 3300046518 Bacteria 8566
295 Ga0495687_002623 3300047443 Bacteria 14107
296 Ga0495686_0002166 3300047472 Bacteria 19134
297 Ga0501031_0000190 3300049568 Bacteria 34607
298 Ga0501032_0004471 3300049569 Bacteria 10530
299 Ga0501032_0011644 3300049569 Bacteria 6307
300 Ga0501033_0000030 3300049570 Bacteria 157953
301 Ga0501034_0000167 3300049571 Bacteria 122702
302 Ga0501037_0021466 3300049573 Bacteria 4772
303 Ga0501038_0002279 3300049574 Bacteria 17851
304 Ga0501039_0000330 3300049575 Bacteria 33796
305 Ga0501043_0003003 3300049579 Bacteria 14043
306 Ga0501217_001017 3300049661 Bacteria 5084
307 Ga0501223_003692 3300049663 Bacteria 3310
308 Ga0501259_002930 3300049688 Bacteria 2738
309 Ga0501241_006786 3300049758 Bacteria 2104
310 Ga0501035_0003021 3300049822 Bacteria 16136
311 Ga0501044_0000503 3300049823 Bacteria 47547
312 Ga0501045_0000962 3300049824 Bacteria 18824
313 nmdc:mga08y16_3286_c1 3300050511 Bacteria 16755
314 nmdc:mga08y16_57804_c1 3300050511 Bacteria 4052
315 Ga0500651_0000118 3300053093 Bacteria 48836
316 Ga0500608_000605 3300053122 Bacteria 13227
317 Ga0500616_0000009 3300053153 Bacteria 779095
318 Ga0500616_0007510 3300053153 Bacteria 6905
319 Ga0500622_0000009 3300053156 Bacteria 419980
320 Ga0500622_0000016 3300053156 Bacteria 337983
321 Ga0500622_0002927 3300053156 Bacteria 11867
322 Ga0500624_001202 3300053157 Bacteria 4683

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031251 Ga0265327_10056016 Ga0265327_100560162 425
2 3300053156 Ga0500622_0000016 Ga0500622_0000016_336672_337970 432
3 3300046518 Ga0495631_0003516 Ga0495631_0003516_4935_6323 434
4 3300005563 Ga0068855_100000988 Ga0068855_10000098811 435
5 3300025949 Ga0207667_10001052 Ga0207667_100010525 435
6 3300028786 Ga0307517_10002409 Ga0307517_1000240916 436
7 3300005548 Ga0070665_100000003 Ga0070665_100000003140 438
8 3300009093 Ga0105240_10007219 Ga0105240_100072198 438
9 3300009093 Ga0105240_10018847 Ga0105240_100188474 438
10 3300013105 Ga0157369_10058906 Ga0157369_100589062 438
11 3300013306 Ga0163162_10000024 Ga0163162_10000024111 438
12 3300025913 Ga0207695_10012585 Ga0207695_100125852 438
13 3300025913 Ga0207695_10035902 Ga0207695_100359022 438
14 3300026041 Ga0207639_10101043 Ga0207639_101010432 438
15 3300028379 Ga0268266_10000380 Ga0268266_1000038064 438
16 3300042005 Ga0439448_0001454 Ga0439448_0001454_3850_5238 438
17 3300053122 Ga0500608_000605 Ga0500608_000605_10740_12128 439
18 3300003316 rootH1_10003356 rootH1_100033566 440
19 3300032004 Ga0307414_10087897 Ga0307414_100878973 440
20 3300032004 Ga0307414_10104627 Ga0307414_101046272 440
21 3300002737 JGI25162J39368_1000161 JGI25162J39368_10001615 441
22 3300010375 Ga0105239_10008178 Ga0105239_100081785 441
23 3300025233 Ga0209437_100077 Ga0209437_10007759 441
24 3300025258 Ga0209129_1007942 Ga0209129_10079422 441
25 3300005355 Ga0070671_100005898 Ga0070671_1000058985 442
26 3300010375 Ga0105239_10082976 Ga0105239_100829762 442
27 3300013308 Ga0157375_10007138 Ga0157375_100071386 442
28 3300025931 Ga0207644_10027277 Ga0207644_100272772 442
29 3300025949 Ga0207667_10249935 Ga0207667_102499351 442
30 3300047443 Ga0495687_002623 Ga0495687_002623_11179_12567 442
31 3300049688 Ga0501259_002930 Ga0501259_002930_1267_2658 443
32 3300005834 Ga0068851_10000899 Ga0068851_1000089912 444
33 3300025321 Ga0207656_10000328 Ga0207656_100003282 444
34 3300002077 JGI24744J21845_10000148 JGI24744J21845_100001484 445
35 3300005328 Ga0070676_10000187 Ga0070676_1000018713 445
36 3300005334 Ga0068869_100196899 Ga0068869_1001968991 445
37 3300005364 Ga0070673_100009864 Ga0070673_1000098641 445
38 3300005366 Ga0070659_100014366 Ga0070659_1000143664 445
39 3300005456 Ga0070678_100001486 Ga0070678_1000014865 445
40 3300005459 Ga0068867_100000770 Ga0068867_10000077011 445
41 3300005539 Ga0068853_100020524 Ga0068853_1000205242 445
42 3300005616 Ga0068852_100018545 Ga0068852_1000185452 445
43 3300005718 Ga0068866_10017685 Ga0068866_100176853 445
44 3300006237 Ga0097621_100000485 Ga0097621_1000004859 445
45 3300006358 Ga0068871_100004975 Ga0068871_1000049752 445
46 3300006881 Ga0068865_100000563 Ga0068865_1000005636 445
47 3300009174 Ga0105241_10062457 Ga0105241_100624573 445
48 3300009176 Ga0105242_10034366 Ga0105242_100343662 445
49 3300009545 Ga0105237_10003315 Ga0105237_100033158 445
50 3300009551 Ga0105238_10142302 Ga0105238_101423022 445
51 3300010375 Ga0105239_10049533 Ga0105239_100495332 445
52 3300013296 Ga0157374_10001424 Ga0157374_100014248 445
53 3300013297 Ga0157378_10074945 Ga0157378_100749453 445
54 3300013308 Ga0157375_10131915 Ga0157375_101319152 445
55 3300025899 Ga0207642_10062201 Ga0207642_100622012 445
56 3300025907 Ga0207645_10000758 Ga0207645_100007588 445
57 3300025911 Ga0207654_10055407 Ga0207654_100554071 445
58 3300025914 Ga0207671_10011832 Ga0207671_100118321 445
59 3300025924 Ga0207694_10086094 Ga0207694_100860942 445
60 3300025932 Ga0207690_10063739 Ga0207690_100637391 445
61 3300025934 Ga0207686_10031029 Ga0207686_100310292 445
62 3300025938 Ga0207704_10000041 Ga0207704_1000004176 445
63 3300026041 Ga0207639_10013566 Ga0207639_100135662 445
64 3300026121 Ga0207683_10008127 Ga0207683_100081272 445
65 3300026142 Ga0207698_10001917 Ga0207698_100019176 445
66 3300037418 Ga0395900_0002301 Ga0395900_0002301_13675_15063 445
67 3300031240 Ga0265320_10045203 Ga0265320_100452032 446
68 3300037312 Ga0395899_0016929 Ga0395899_0016929_1296_2684 446
69 3300037418 Ga0395900_0000014 Ga0395900_0000014_276292_277680 446
70 3300037466 Ga0395898_0006177 Ga0395898_0006177_10292_11680 446
71 3300037471 Ga0395905_0000241 Ga0395905_0000241_14601_15989 446
72 3300038443 Ga0395901_0000582 Ga0395901_0000582_12981_14369 446
73 3300044712 Ga0453684_0211811 Ga0453684_0211811_90_1514 446
74 3300005578 Ga0068854_100040982 Ga0068854_1000409823 447
75 3300009093 Ga0105240_10144691 Ga0105240_101446913 447
76 3300010375 Ga0105239_10008651 Ga0105239_100086512 447
77 3300025298 Ga0209050_1011238 Ga0209050_10112382 447
78 3300025914 Ga0207671_10009882 Ga0207671_100098822 447
79 3300049569 Ga0501032_0011644 Ga0501032_0011644_4954_6297 447
80 3300045051 Ga0451576_0000020 Ga0451576_0000020_124918_126384 449
81 3300037471 Ga0395905_0025378 Ga0395905_0025378_2384_3922 451
82 3300003322 rootL2_10038362 rootL2_100383625 452
83 3300028573 Ga0265334_10026020 Ga0265334_100260202 453
84 3300033180 Ga0307510_10057557 Ga0307510_100575574 454
85 3300053157 Ga0500624_001202 Ga0500624_001202_1532_2923 455
86 3300053153 Ga0500616_0007510 Ga0500616_0007510_5198_6589 456
87 iso_pu_bacteria 2919437846 2919438503 457
88 3300005548 Ga0070665_100139402 Ga0070665_1001394022 458
89 iso_pu_bacteria 2585427687 2586208136 458
90 iso_pu_bacteria 2738541284 2738760586 458
91 iso_pu_bacteria 2738543023 2739300595 458
92 iso_pu_bacteria 2739367651 2739590382 458
93 iso_pu_bacteria 2739367656 2739617402 458
94 iso_pu_bacteria 2739367663 2739647597 458
95 iso_pu_bacteria 2775506987 2776612727 458
96 iso_pu_bacteria 2818991437 2819547761 458
97 iso_pu_bacteria 2842722452 2842726027 458
98 iso_pu_bacteria 2842909656 2842912792 458
99 iso_pu_bacteria 2849281842 2849286751 458
100 iso_pu_bacteria 2852623160 2852623391 458
101 iso_pu_bacteria 2852627209 2852630165 458
102 iso_pu_bacteria 2857627736 2857632166 458
103 iso_pu_bacteria 2884933994 2884937732 458
104 iso_pu_bacteria 2890804823 2890807026 458
105 iso_pu_bacteria 2902048731 2902051485 458
106 iso_pu_bacteria 2904445276 2904447601 458
107 iso_pu_bacteria 2919186247 2919189904 458
108 iso_pu_bacteria 2939664404 2939668184 458
109 iso_pu_bacteria 2945997725 2946001480 458
110 iso_pu_bacteria 2954016120 2954018466 458
111 iso_pu_bacteria 2977232053 2977232766 458
112 3300005614 Ga0068856_100055971 Ga0068856_1000559713 459
113 3300026078 Ga0207702_10051034 Ga0207702_100510342 459
114 3300005445 Ga0070708_100000859 Ga0070708_1000008599 460
115 3300005467 Ga0070706_100080499 Ga0070706_1000804992 460
116 3300005468 Ga0070707_100089561 Ga0070707_1000895612 460
117 3300028556 Ga0265337_1000192 Ga0265337_10001923 460
118 3300028558 Ga0265326_10001006 Ga0265326_100010063 460
119 3300028558 Ga0265326_10010704 Ga0265326_100107041 460
120 3300028563 Ga0265319_1000267 Ga0265319_10002676 460
121 3300028563 Ga0265319_1000476 Ga0265319_100047620 460
122 3300028573 Ga0265334_10001728 Ga0265334_100017287 460
123 3300028653 Ga0265323_10000026 Ga0265323_1000002648 460
124 3300028654 Ga0265322_10000471 Ga0265322_100004712 460
125 3300028666 Ga0265336_10000102 Ga0265336_1000010237 460
126 3300028800 Ga0265338_10000250 Ga0265338_1000025017 460
127 3300028800 Ga0265338_10001401 Ga0265338_100014013 460
128 3300028800 Ga0265338_10003829 Ga0265338_1000382910 460
129 3300028800 Ga0265338_10013159 Ga0265338_100131599 460
130 3300029957 Ga0265324_10000661 Ga0265324_1000066125 460
131 3300029957 Ga0265324_10011328 Ga0265324_100113282 460
132 3300031235 Ga0265330_10000231 Ga0265330_1000023125 460
133 3300031238 Ga0265332_10004802 Ga0265332_100048022 460
134 3300031240 Ga0265320_10000274 Ga0265320_1000027425 460
135 3300031240 Ga0265320_10000935 Ga0265320_1000093513 460
136 3300031241 Ga0265325_10003693 Ga0265325_100036933 460
137 3300031242 Ga0265329_10005765 Ga0265329_100057652 460
138 3300031247 Ga0265340_10005093 Ga0265340_100050932 460
139 3300031247 Ga0265340_10005627 Ga0265340_100056273 460
140 3300031249 Ga0265339_10000148 Ga0265339_1000014831 460
141 3300031250 Ga0265331_10002549 Ga0265331_100025494 460
142 3300031344 Ga0265316_10000342 Ga0265316_1000034217 460
143 3300031344 Ga0265316_10022930 Ga0265316_100229304 460
144 3300031595 Ga0265313_10012108 Ga0265313_100121083 460
145 3300031711 Ga0265314_10000812 Ga0265314_1000081225 460
146 3300031712 Ga0265342_10000222 Ga0265342_1000022235 460
147 3300031712 Ga0265342_10007337 Ga0265342_100073375 460
148 3300042876 Ga0451577_0001334 Ga0451577_0001334_6768_8159 460
149 3300044712 Ga0453684_0000004 Ga0453684_0000004_284829_286220 460
150 iso_pu_bacteria 2739367866 2740033638 460
151 iso_pu_bacteria 2911138879 2911143833 460
152 3300005327 Ga0070658_10000857 Ga0070658_100008579 461
153 3300005327 Ga0070658_10132563 Ga0070658_101325632 461
154 3300005329 Ga0070683_100001919 Ga0070683_10000191915 461
155 3300005364 Ga0070673_100055226 Ga0070673_1000552262 461
156 3300005544 Ga0070686_100083230 Ga0070686_1000832302 461
157 3300009093 Ga0105240_10000074 Ga0105240_1000007462 461
158 3300009093 Ga0105240_10104810 Ga0105240_101048102 461
159 3300009553 Ga0105249_10214193 Ga0105249_102141931 461
160 3300010375 Ga0105239_10000002 Ga0105239_10000002376 461
161 3300013102 Ga0157371_10016094 Ga0157371_100160944 461
162 3300013307 Ga0157372_10000462 Ga0157372_100004622 461
163 3300025250 Ga0209026_1001469 Ga0209026_10014692 461
164 3300025913 Ga0207695_10066377 Ga0207695_100663772 461
165 3300026116 Ga0207674_10180718 Ga0207674_101807181 461
166 3300028786 Ga0307517_10003658 Ga0307517_1000365811 461
167 3300037471 Ga0395905_0000003 Ga0395905_0000003_814163_815548 461
168 3300047472 Ga0495686_0002166 Ga0495686_0002166_14911_16299 461
169 2162886007 SwRhRL2b_contig_3941560 SwRhRL2b_0610.00003870 462
170 3300002067 JGI24735J21928_10008197 JGI24735J21928_100081972 462
171 3300002737 JGI25162J39368_1001026 JGI25162J39368_100102614 462
172 3300002741 JGI25157J39369_1003396 JGI25157J39369_10033962 462
173 3300002773 JGI25152J39213_1000067 JGI25152J39213_100006731 462
174 3300002774 JGI25150J39212_1000001 JGI25150J39212_1000001855 462
175 3300003187 JGI25151J46595_10000005 JGI25151J46595_10000005349 462
176 3300003214 JGI25165J46597_1000694 JGI25165J46597_100069413 462
177 3300003215 JGI25153J46596_10000040 JGI25153J46596_10000040112 462
178 3300003316 rootH1_10051066 rootH1_100510662 462
179 3300003320 rootH2_10001134 rootH2_1000113432 462
180 3300003320 rootH2_10004703 rootH2_100047032 462
181 3300003322 rootL2_10002860 rootL2_100028603 462
182 3300003322 rootL2_10048867 rootL2_100488675 462
183 3300003322 rootL2_10110070 rootL2_101100704 462
184 3300003323 rootH1_10003699 rootH1_1000369925 462
185 3300003323 rootH1_10020300 rootH1_1002030010 462
186 3300003323 rootH1_10044222 rootH1_100442225 462
187 3300003323 rootH1_10060952 rootH1_1006095217 462
188 3300003323 rootH1_10066792 rootH1_100667922 462
189 3300003323 rootH1_10095939 rootH1_100959397 462
190 3300003791 Ga0055530_10000622 Ga0055530_1000062224 462
191 3300003794 Ga0055531_10000018 Ga0055531_10000018109 462
192 3300005262 Ga0065165_1001340 Ga0065165_100134012 462
193 3300005288 Ga0065714_10002487 Ga0065714_100024875 462
194 3300005288 Ga0065714_10003240 Ga0065714_100032401 462
195 3300005288 Ga0065714_10075980 Ga0065714_100759802 462
196 3300005339 Ga0070660_100011681 Ga0070660_1000116813 462
197 3300005366 Ga0070659_100000242 Ga0070659_10000024233 462
198 3300005366 Ga0070659_100010662 Ga0070659_1000106624 462
199 3300005457 Ga0070662_100000011 Ga0070662_10000001150 462
200 3300005458 Ga0070681_10012638 Ga0070681_100126382 462
201 3300005530 Ga0070679_100005905 Ga0070679_1000059052 462
202 3300005563 Ga0068855_100076421 Ga0068855_1000764213 462
203 3300005614 Ga0068856_100001307 Ga0068856_10000130723 462
204 3300005614 Ga0068856_100018613 Ga0068856_1000186132 462
205 3300006844 Ga0075428_100086086 Ga0075428_1000860864 462
206 3300009093 Ga0105240_10000126 Ga0105240_1000012687 462
207 3300009093 Ga0105240_10105032 Ga0105240_101050322 462
208 3300009094 Ga0111539_10008032 Ga0111539_100080322 462
209 3300009094 Ga0111539_10018146 Ga0111539_100181462 462
210 3300009174 Ga0105241_10001542 Ga0105241_100015425 462
211 3300009174 Ga0105241_10007620 Ga0105241_100076201 462
212 3300009545 Ga0105237_10001772 Ga0105237_100017723 462
213 3300009545 Ga0105237_10008127 Ga0105237_100081277 462
214 3300010375 Ga0105239_10078886 Ga0105239_100788862 462
215 3300013100 Ga0157373_10000031 Ga0157373_1000003137 462
216 3300013100 Ga0157373_10000904 Ga0157373_100009041 462
217 3300013100 Ga0157373_10007070 Ga0157373_100070702 462
218 3300013100 Ga0157373_10009100 Ga0157373_100091002 462
219 3300013100 Ga0157373_10058313 Ga0157373_100583132 462
220 3300013102 Ga0157371_10000216 Ga0157371_1000021658 462
221 3300013102 Ga0157371_10003250 Ga0157371_100032502 462
222 3300013102 Ga0157371_10005899 Ga0157371_100058994 462
223 3300013102 Ga0157371_10015179 Ga0157371_100151793 462
224 3300013104 Ga0157370_10015705 Ga0157370_100157052 462
225 3300013104 Ga0157370_10027966 Ga0157370_100279662 462
226 3300013104 Ga0157370_10072109 Ga0157370_100721092 462
227 3300013105 Ga0157369_10000004 Ga0157369_10000004155 462
228 3300013105 Ga0157369_10245701 Ga0157369_102457012 462
229 3300013296 Ga0157374_10000647 Ga0157374_100006475 462
230 3300013297 Ga0157378_10013537 Ga0157378_100135374 462
231 3300013306 Ga0163162_10001864 Ga0163162_100018641 462
232 3300013306 Ga0163162_10025043 Ga0163162_100250433 462
233 3300013307 Ga0157372_10000011 Ga0157372_1000001168 462
234 3300013307 Ga0157372_10000196 Ga0157372_1000019616 462
235 3300013307 Ga0157372_10056522 Ga0157372_100565223 462
236 3300013308 Ga0157375_10041540 Ga0157375_100415402 462
237 3300013308 Ga0157375_10083527 Ga0157375_100835272 462
238 3300013308 Ga0157375_10128626 Ga0157375_101286262 462
239 3300014326 Ga0157380_10016321 Ga0157380_100163214 462
240 3300014497 Ga0182008_10000008 Ga0182008_10000008105 462
241 3300014497 Ga0182008_10000384 Ga0182008_1000038410 462
242 3300014497 Ga0182008_10033410 Ga0182008_100334102 462
243 3300015261 Ga0182006_1000164 Ga0182006_100016456 462
244 3300015261 Ga0182006_1000335 Ga0182006_10003355 462
245 3300015262 Ga0182007_10000027 Ga0182007_1000002790 462
246 3300015262 Ga0182007_10022918 Ga0182007_100229182 462
247 3300015682 Ga0183373_1003 Ga0183373_1003390 462
248 3300017792 Ga0163161_10002252 Ga0163161_1000225211 462
249 3300017792 Ga0163161_10079526 Ga0163161_100795263 462
250 3300025231 Ga0207427_100337 Ga0207427_10033723 462
251 3300025233 Ga0209437_100008 Ga0209437_100008148 462
252 3300025245 Ga0207425_1000002 Ga0207425_1000002326 462
253 3300025250 Ga0209026_1000219 Ga0209026_100021951 462
254 3300025258 Ga0209129_1000002 Ga0209129_1000002326 462
255 3300025261 Ga0209233_1000024 Ga0209233_1000024511 462
256 3300025261 Ga0209233_1000396 Ga0209233_100039628 462
257 3300025292 Ga0209676_1000042 Ga0209676_1000042355 462
258 3300025294 Ga0209025_1000004 Ga0209025_1000004864 462
259 3300025297 Ga0209758_1000006 Ga0209758_1000006864 462
260 3300025298 Ga0209050_1000035 Ga0209050_1000035354 462
261 3300025304 Ga0209257_1000299 Ga0209257_100029958 462
262 3300025904 Ga0207647_10000104 Ga0207647_1000010457 462
263 3300025904 Ga0207647_10002305 Ga0207647_100023058 462
264 3300025911 Ga0207654_10002598 Ga0207654_100025982 462
265 3300025912 Ga0207707_10006352 Ga0207707_1000635210 462
266 3300025913 Ga0207695_10000013 Ga0207695_10000013408 462
267 3300025913 Ga0207695_10078483 Ga0207695_100784833 462
268 3300025914 Ga0207671_10001410 Ga0207671_100014103 462
269 3300025914 Ga0207671_10013966 Ga0207671_100139663 462
270 3300025919 Ga0207657_10056325 Ga0207657_100563253 462
271 3300025921 Ga0207652_10090977 Ga0207652_100909772 462
272 3300025932 Ga0207690_10001885 Ga0207690_100018856 462
273 3300025932 Ga0207690_10006778 Ga0207690_100067782 462
274 3300025933 Ga0207706_10003796 Ga0207706_100037962 462
275 3300026067 Ga0207678_10040315 Ga0207678_100403152 462
276 3300026078 Ga0207702_10003684 Ga0207702_100036846 462
277 3300027907 Ga0207428_10034700 Ga0207428_100347002 462
278 3300027907 Ga0207428_10050176 Ga0207428_100501762 462
279 3300028653 Ga0265323_10000040 Ga0265323_1000004015 462
280 3300028794 Ga0307515_10000133 Ga0307515_10000133137 462
281 3300028794 Ga0307515_10083460 Ga0307515_100834603 462
282 3300028794 Ga0307515_10114927 Ga0307515_101149273 462
283 3300031251 Ga0265327_10035074 Ga0265327_100350742 462
284 3300031344 Ga0265316_10000582 Ga0265316_100005829 462
285 3300031344 Ga0265316_10009822 Ga0265316_100098225 462
286 3300031344 Ga0265316_10064151 Ga0265316_100641512 462
287 3300031507 Ga0307509_10066138 Ga0307509_100661384 462
288 3300031548 Ga0307408_100002357 Ga0307408_1000023579 462
289 3300031548 Ga0307408_100002945 Ga0307408_1000029456 462
290 3300031731 Ga0307405_10000008 Ga0307405_10000008151 462
291 3300031903 Ga0307407_10000056 Ga0307407_1000005620 462
292 3300031911 Ga0307412_10000009 Ga0307412_10000009391 462
293 3300031995 Ga0307409_100119566 Ga0307409_1001195661 462
294 3300032002 Ga0307416_100000048 Ga0307416_10000004882 462
295 3300032002 Ga0307416_100054525 Ga0307416_1000545253 462
296 3300032004 Ga0307414_10001974 Ga0307414_100019743 462
297 3300032004 Ga0307414_10010292 Ga0307414_100102921 462
298 3300032004 Ga0307414_10110082 Ga0307414_101100821 462
299 3300032126 Ga0307415_100007392 Ga0307415_1000073923 462
300 3300035695 Ga0373927_0022323 Ga0373927_0022323_131_1552 462
301 3300036647 Ga0316582_0017888 Ga0316582_0017888_1960_3366 462
302 3300037312 Ga0395899_0000304 Ga0395899_0000304_18763_20154 462
303 3300039447 Ga0436361_0971561 Ga0436361_0971561_8009_9397 462
304 3300042876 Ga0451577_0007012 Ga0451577_0007012_4255_5655 462
305 3300042876 Ga0451577_0008149 Ga0451577_0008149_2150_3541 462
306 3300042876 Ga0451577_0128557 Ga0451577_0128557_651_2048 462
307 3300044673 Ga0453683_0015899 Ga0453683_0015899_251_1642 462
308 3300044673 Ga0453683_0039818 Ga0453683_0039818_114_1505 462
309 3300044712 Ga0453684_0001660 Ga0453684_0001660_2213_3604 462
310 3300044712 Ga0453684_0002144 Ga0453684_0002144_46861_48252 462
311 3300044712 Ga0453684_0003330 Ga0453684_0003330_23906_25294 462
312 3300044712 Ga0453684_0006267 Ga0453684_0006267_9516_10907 462
313 3300044712 Ga0453684_0014621 Ga0453684_0014621_4205_5605 462
314 3300044712 Ga0453684_0015358 Ga0453684_0015358_9045_10439 462
315 3300044712 Ga0453684_0157586 Ga0453684_0157586_225_1616 462
316 3300044712 Ga0453684_0198454 Ga0453684_0198454_11_1408 462
317 3300045049 Ga0466959_0083458 Ga0466959_0083458_117_1508 462
318 3300045051 Ga0451576_0002056 Ga0451576_0002056_18422_19813 462
319 3300045051 Ga0451576_0007238 Ga0451576_0007238_10128_11519 462
320 3300045051 Ga0451576_0011975 Ga0451576_0011975_605_1996 462
321 3300045051 Ga0451576_0031652 Ga0451576_0031652_203_1594 462
322 3300045051 Ga0451576_0034828 Ga0451576_0034828_2567_3967 462
323 3300045051 Ga0451576_0057571 Ga0451576_0057571_1429_2820 462
324 3300045051 Ga0451576_0124640 Ga0451576_0124640_1261_2655 462
325 3300045836 Ga0466958_0033531 Ga0466958_0033531_1463_2854 462
326 3300046460 Ga0495638_0000001 Ga0495638_0000001_360343_361734 462
327 3300046512 Ga0495610_0000233 Ga0495610_0000233_35609_36997 462
328 3300046512 Ga0495610_0001814 Ga0495610_0001814_16417_17805 462
329 3300049568 Ga0501031_0000190 Ga0501031_0000190_5464_6852 462
330 3300049569 Ga0501032_0004471 Ga0501032_0004471_3082_4470 462
331 3300049570 Ga0501033_0000030 Ga0501033_0000030_55759_57147 462
332 3300049571 Ga0501034_0000167 Ga0501034_0000167_93454_94842 462
333 3300049573 Ga0501037_0021466 Ga0501037_0021466_1105_2493 462
334 3300049574 Ga0501038_0002279 Ga0501038_0002279_11984_13372 462
335 3300049575 Ga0501039_0000330 Ga0501039_0000330_24570_25958 462
336 3300049579 Ga0501043_0003003 Ga0501043_0003003_10585_11973 462
337 3300049661 Ga0501217_001017 Ga0501217_001017_2457_3848 462
338 3300049663 Ga0501223_003692 Ga0501223_003692_290_1678 462
339 3300049758 Ga0501241_006786 Ga0501241_006786_343_1770 462
340 3300049822 Ga0501035_0003021 Ga0501035_0003021_10898_12286 462
341 3300049823 Ga0501044_0000503 Ga0501044_0000503_27777_29165 462
342 3300049824 Ga0501045_0000962 Ga0501045_0000962_2607_3995 462
343 3300050511 nmdc:mga08y16_3286_c1 nmdc:mga08y16_3286_c1_6618_8009 462
344 3300050511 nmdc:mga08y16_57804_c1 nmdc:mga08y16_57804_c1_1475_2866 462
345 3300053093 Ga0500651_0000118 Ga0500651_0000118_46138_47526 462
346 3300053153 Ga0500616_0000009 Ga0500616_0000009_366149_367678 462
347 3300053156 Ga0500622_0000009 Ga0500622_0000009_333596_334987 462
348 3300053156 Ga0500622_0002927 Ga0500622_0002927_3820_5352 462

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02852

Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

391

500

0.99

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

221

302

0.96

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

50

371

0.96

PF00890

FAD_binding_2

FAD binding domain

51

92

0.88

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

53

355

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
6uzi-assembly2.cif.gz_C crystal structure of dihydrolipoyl dehydrogenase from elizabethkingia anophelis nuhp1 0.9838 2 462
6uzi-assembly2.cif.gz_C crystal structure of dihydrolipoyl dehydrogenase from elizabethkingia anophelis nuhp1 0.9796 2 462
6i4u-assembly1.cif.gz_A crystal structure of the disease-causing g426e mutant of the human dihydrolipoamide dehydrogenase 0.9795 1 462
5u8w-assembly1.cif.gz_B dihydrolipoamide dehydrogenase (lpdg) from pseudomonas aeruginosa bound to nadh 0.9792 1 462
6i4s-assembly1.cif.gz_A crystal structure of the disease-causing r447g mutant of the human dihydrolipoamide dehydrogenase 0.979 1 462
ID Description Score Start End Superfamily
1ebdA03 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.986 343 455 3.30.390.30
af_A0A1D6LYX0_29_117_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9768 154 232 3.50.50.60
6bz0A03 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9762 343 462 3.30.390.30
5x1yD03 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9718 343 454 3.30.390.30
af_Q8I5A0_386_506_3.30.390.30 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9684 336 455 3.30.390.30
ID Description Score Start End GO Terms
AF-A0A355BWG5-F1-model_v4 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) 0.9971 47 462 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A2B4RK45-F1-model_v4 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) 0.9969 1 460 GO:0004148
GO:0004834
GO:0005737
GO:0006568
GO:0050660
AF-A0A7Y3TDM0-F1-model_v4 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) 0.9966 1 462 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A1Q3Z8A5-F1-model_v4 deleted 0.996 1 462
AF-A0A2N2ZBJ5-F1-model_v4 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) 0.9958 1 394 GO:0004148
GO:0006090
GO:0006103
GO:0050660

Feature Viewer

pLDDT pTM Quality
95.36 0.92 High
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Predicted Structure (AlphaFold2)

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