F417180

General Info

Members Datasets Scaffolds Average Seq Length
347 237 329 323

Family's Representative Sequence

Representative Sequence 3300026067|Ga0207678_10170865|Ga0207678_101708652
Length 362
Sequence MAKQSVYVTRMIPEQTIDTLREHFDVNVNPEDRAHTREELLKAVRGRDAVVSLLTDKIDGEVLDAAGPQCRIVANYAVGFNNFDLDAASARGVIMTNTPGVLDDATATHAWALLLATARRVSESERYVRAGKWEGWAPMAFIGQDVDNKTLGIAGLGRIGSKFARKAAAFDMNIIYTDAKPNEAFERQYNARFVDKATLLRESDYLSLHLPLLPETHHYIGAAELAAMKPTAVLINAARGPLVDEKALVVALKDKVIWGAGLDVFNHEPKLDPRYFDLPNVFMLPHIGSSTIETRRRMAQGLLHSLRQWLAGHLEFHLLGNHLLENAVTLAMLGSCSNGACSCSLTSRPPSDSARRRAEDAS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
3 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
4 2738541283 Pedobacter sp. OK701 Isolate Unclassified
5 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
6 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
7 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
8 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
9 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
10 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
11 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
12 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
13 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
14 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
15 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
16 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
17 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
20 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
21 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
22 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
23 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
26 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
31 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
32 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
33 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
34 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
35 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
70 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
71 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
73 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
74 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
90 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
91 3300028036 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300030863 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
99 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
102 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
103 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
104 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
105 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
106 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
107 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
108 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
111 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
116 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
117 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
118 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
119 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
120 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
121 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
122 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
123 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
128 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
129 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
130 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
131 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
132 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
133 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
134 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
135 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
138 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
139 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
140 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
141 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
142 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
143 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
144 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
145 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
146 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
147 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
148 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
149 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
150 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
151 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
152 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
153 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
154 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
155 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
156 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
157 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
158 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
159 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
160 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
161 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
162 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
163 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
164 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
165 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
166 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
167 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
168 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
169 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
170 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
171 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
172 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
173 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
174 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
175 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
176 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
177 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
178 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
179 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
180 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
181 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
182 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
183 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
184 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
185 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
186 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
187 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
188 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
189 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
190 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
191 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
192 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
193 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
194 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
195 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
196 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
197 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
198 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
199 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
200 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
201 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
202 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
203 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
204 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
205 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
206 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
207 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
208 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
209 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
210 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
211 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
212 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
213 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
214 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
215 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
216 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
217 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
218 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
220 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
221 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
222 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
223 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
224 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
225 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
226 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
227 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
228 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
229 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
230 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
231 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
232 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
233 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
234 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
235 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
236 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
237 8054844752 Dryocola boscaweniae H18W14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.93
Metatranscriptomes 2.59
Isolates 5.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.15
Nodule 0
Rhizoplane 2.59
Rhizosphere 84.73
Stem 0
Stem Tuber 0
Unclassified 11.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1211701 2162886007 Bacteria 2744
2 rootH2_10022576 3300003320 Unclassified 2292
3 rootH2_10025899 3300003320 Bacteria 21397
4 rootH2_10040182 3300003320 Bacteria 12298
5 rootL2_10194357 3300003322 Bacteria 2753
6 rootH1_10063127 3300003316 Bacteria 8410
7 rootH1_10063127 3300003323 Bacteria 2558
8 rootH1_10065401 3300003323 Unclassified 2234
9 rootH1_10067010 3300003323 Bacteria 9725
10 rootH1_10084187 3300003323 Bacteria 7593
11 rootH1_10089459 3300003323 Bacteria 8651
12 Ga0006562J51391_1019581 3300003578 Bacteria 1517
13 Ga0055532_1000917 3300003758 Bacteria 9610
14 Ga0065704_10081737 3300005289 Bacteria 3701
15 Ga0070658_10053764 3300005327 Bacteria 3269
16 Ga0070683_100226455 3300005329 Bacteria 1777
17 Ga0068869_100052187 3300005334 Bacteria 2969
18 Ga0070660_100023659 3300005339 Bacteria 4553
19 Ga0070671_100345602 3300005355 Bacteria 1269
20 Ga0070673_100194611 3300005364 Bacteria 1743
21 Ga0070659_100004616 3300005366 Bacteria 9841
22 Ga0070709_10084639 3300005434 Bacteria 2077
23 Ga0070710_10034326 3300005437 Bacteria 2759
24 Ga0070701_10002176 3300005438 Bacteria 7467
25 Ga0070711_100001028 3300005439 Bacteria 14831
26 Ga0070711_100010796 3300005439 Bacteria 5664
27 Ga0070707_100354555 3300005468 Unclassified 1425
28 Ga0070699_100161795 3300005518 Unclassified 1981
29 Ga0070679_100038687 3300005530 Bacteria 4742
30 Ga0068853_100097441 3300005539 Bacteria 2596
31 Ga0068853_100464741 3300005539 Bacteria 1191
32 Ga0070665_100159390 3300005548 Bacteria 2258
33 Ga0068855_100002929 3300005563 Bacteria 20890
34 Ga0068857_100287022 3300005577 Unclassified 1515
35 Ga0081455_10154138 3300005937 Bacteria 1768
36 Ga0070716_100000837 3300006173 Bacteria 13278
37 Ga0070712_100018529 3300006175 Unclassified 4525
38 Ga0070712_100022937 3300006175 Bacteria 4116
39 Ga0075428_100088140 3300006844 Bacteria 3385
40 Ga0075431_100123747 3300006847 Bacteria 2668
41 Ga0075433_10212379 3300006852 Bacteria 1719
42 Ga0075429_100061093 3300006880 Bacteria 3282
43 Ga0099795_10000532 3300007788 Bacteria 7178
44 Ga0105240_10009231 3300009093 Bacteria 13992
45 Ga0105243_10000025 3300009148 Bacteria 193732
46 Ga0105242_10041159 3300009176 Bacteria 3726
47 Ga0105248_10038554 3300009177 Bacteria 5348
48 Ga0105248_10120941 3300009177 Bacteria 2954
49 Ga0105237_10005078 3300009545 Bacteria 14953
50 Ga0105237_10005209 3300009545 Bacteria 14706
51 Ga0105237_10011485 3300009545 Bacteria 9370
52 Ga0105237_10029401 3300009545 Bacteria 5586
53 Ga0105238_10025767 3300009551 Bacteria 5996
54 Ga0105249_10063394 3300009553 Bacteria 3396
55 Ga0099796_10000378 3300010159 Bacteria 7278
56 Ga0105239_10001549 3300010375 Bacteria 30378
57 Ga0105239_10355204 3300010375 Bacteria 1655
58 Ga0157371_10000584 3300013102 Bacteria 43265
59 Ga0157371_10044795 3300013102 Bacteria 3149
60 Ga0157370_10002932 3300013104 Bacteria 20306
61 Ga0157370_10012968 3300013104 Bacteria 8614
62 Ga0157372_10008116 3300013307 Bacteria 11166
63 Ga0157372_10101012 3300013307 Bacteria 3292
64 Ga0157375_10021985 3300013308 Bacteria 5864
65 Ga0182008_10000989 3300014497 Bacteria 19731
66 Ga0182008_10009803 3300014497 Bacteria 5154
67 Ga0182008_10146218 3300014497 Bacteria 1184
68 Ga0157379_10136512 3300014968 Bacteria 2210
69 Ga0157376_10000949 3300014969 Bacteria 18879
70 Ga0182006_1000197 3300015261 Bacteria 61875
71 Ga0163161_10015106 3300017792 Bacteria 5384
72 Ga0213876_10010541 3300021384 Bacteria 4954
73 Ga0213871_10005517 3300021441 Bacteria 2614
74 Ga0228598_1000227 3300024227 Bacteria 10661
75 Ga0228598_1016675 3300024227 Bacteria 1450
76 Ga0209147_100136 3300025229 Bacteria 117683
77 Ga0209233_1014744 3300025261 Bacteria 2193
78 Ga0207426_1000019 3300025302 Bacteria 558579
79 Ga0207692_10110129 3300025898 Bacteria 1526
80 Ga0207699_10041754 3300025906 Bacteria 2651
81 Ga0207707_10452650 3300025912 Bacteria 1098
82 Ga0207695_10030297 3300025913 Bacteria 5958
83 Ga0207671_10001984 3300025914 Bacteria 22567
84 Ga0207671_10002570 3300025914 Bacteria 19248
85 Ga0207671_10021171 3300025914 Bacteria 4938
86 Ga0207671_10323976 3300025914 Bacteria 1220
87 Ga0207693_10004466 3300025915 Bacteria 11826
88 Ga0207693_10012683 3300025915 Bacteria 6806
89 Ga0207663_10006724 3300025916 Bacteria 5911
90 Ga0207663_10013026 3300025916 Unclassified 4510
91 Ga0207663_10046324 3300025916 Bacteria 2679
92 Ga0207694_10056641 3300025924 Bacteria 3045
93 Ga0207709_10000003 3300025935 Bacteria 1050072
94 Ga0207665_10002558 3300025939 Bacteria 12210
95 Ga0207711_10035325 3300025941 Bacteria 4236
96 Ga0207711_10391527 3300025941 Bacteria 1290
97 Ga0207667_10134098 3300025949 Bacteria 2550
98 Ga0207651_10372448 3300025960 Bacteria 1208
99 Ga0207678_10170865 3300026067 Bacteria 1856
100 Ga0207674_10448201 3300026116 Bacteria 1247
101 Ga0265354_1000062 3300028016 Bacteria 17972
102 Ga0265356_1000847 3300028017 Bacteria 5036
103 Ga0265356_1002722 3300028017 Bacteria 2295
104 Ga0265355_1000052 3300028036 Unclassified 3785
105 Ga0268266_10129221 3300028379 Bacteria 2258
106 Ga0265338_10001894 3300028800 Bacteria 32749
107 Ga0265338_10016000 3300028800 Bacteria 8197
108 Ga0265338_10020367 3300028800 Bacteria 6982
109 Ga0265338_10049062 3300028800 Unclassified 3831
110 Ga0265762_1000839 3300030760 Bacteria 5454
111 Ga0265766_1000013 3300030863 Bacteria 6820
112 Ga0265770_1003981 3300030878 Unclassified 2013
113 Ga0265760_10000126 3300031090 Bacteria 19409
114 Ga0265760_10001064 3300031090 Bacteria 7969
115 Ga0265760_10001542 3300031090 Bacteria 6800
116 Ga0265760_10002537 3300031090 Bacteria 5330
117 Ga0265760_10017593 3300031090 Unclassified 2053
118 Ga0265325_10040332 3300031241 Unclassified 2452
119 Ga0265339_10095136 3300031249 Unclassified 1556
120 Ga0265316_10052607 3300031344 Unclassified 3194
121 Ga0265313_10000194 3300031595 Bacteria 65054
122 Ga0265313_10034524 3300031595 Bacteria 2557
123 Ga0265313_10123034 3300031595 Bacteria 1130
124 Ga0316576_10007623 3300031727 Bacteria 6828
125 Ga0316577_10035510 3300031733 Bacteria 2786
126 Ga0316583_10010397 3300032133 Bacteria 3355
127 Ga0316583_10024852 3300032133 Bacteria 2140
128 Ga0373930_0000544 3300034816 Bacteria 5185
129 Ga0373928_0012839 3300035084 Bacteria 1675
130 Ga0373932_0012142 3300035112 Bacteria 2117
131 Ga0316574_0039589 3300035398 Bacteria 2899
132 Ga0373931_0000010 3300035691 Bacteria 334069
133 Ga0373931_0000171 3300035691 Bacteria 28305
134 Ga0316582_0079664 3300036647 Unclassified 2136
135 Ga0316582_0109752 3300036647 Bacteria 1835
136 Ga0316584_0227790 3300036712 Bacteria 1367
137 Ga0395899_0000002 3300037312 Bacteria 1324310
138 Ga0395899_0048856 3300037312 Bacteria 3146
139 Ga0395899_0052024 3300037312 Bacteria 3037
140 Ga0395899_0125404 3300037312 Bacteria 1836
141 Ga0395900_0115678 3300037418 Bacteria 2752
142 Ga0395900_0213931 3300037418 Bacteria 1945
143 Ga0395900_0219238 3300037418 Bacteria 1918
144 Ga0395900_0463547 3300037418 Bacteria 1221
145 Ga0395898_0009255 3300037466 Bacteria 10358
146 Ga0395898_0121129 3300037466 Bacteria 2506
147 Ga0395898_0167565 3300037466 Bacteria 2100
148 Ga0436364_1018519 3300037853 Bacteria 2706
149 Ga0436364_1170381 3300037853 Bacteria 2240
150 Ga0395901_0003994 3300038443 Bacteria 14853
151 Ga0395901_0278501 3300038443 Bacteria 1738
152 Ga0400488_05767 3300038741 Bacteria 3202
153 Ga0400483_014790 3300039062 Bacteria 5839
154 Ga0400483_221765 3300039062 Bacteria 4551
155 Ga0400487_01137 3300039110 Bacteria 13600
156 Ga0436360_0130692 3300039438 Bacteria 11532
157 Ga0436361_0447095 3300039447 Bacteria 5738
158 Ga0436362_1049175 3300039453 Bacteria 2628
159 Ga0451853_2571041 3300041512 Bacteria 1040
160 Ga0466972_0000407 3300044658 Bacteria 22550
161 Ga0466965_0001924 3300044683 Bacteria 8666
162 Ga0453684_0189097 3300044712 Bacteria 2410
163 Ga0453684_0419143 3300044712 Unclassified 1496
164 Ga0453684_0431858 3300044712 Bacteria 1469
165 Ga0466968_0000597 3300044735 Bacteria 12290
166 Ga0495592_0021215 3300046454 Bacteria 4939
167 Ga0495603_0000760 3300046455 Bacteria 18426
168 Ga0495590_0001491 3300046457 Bacteria 10067
169 Ga0495629_0001443 3300046459 Bacteria 18744
170 Ga0495638_0014379 3300046460 Bacteria 5352
171 Ga0495641_0007642 3300046461 Bacteria 6715
172 Ga0495641_0018962 3300046461 Bacteria 3534
173 Ga0495651_0043356 3300046462 Bacteria 3491
174 Ga0495651_0111327 3300046462 Bacteria 2024
175 Ga0495653_0000578 3300046463 Bacteria 28112
176 Ga0495653_0125221 3300046463 Bacteria 1826
177 Ga0495650_0020533 3300046471 Bacteria 3218
178 Ga0495580_0000763 3300046472 Bacteria 27666
179 Ga0495580_0003133 3300046472 Bacteria 14172
180 Ga0495580_0014385 3300046472 Bacteria 6001
181 Ga0495580_0018601 3300046472 Bacteria 5171
182 Ga0495582_0000320 3300046473 Bacteria 26238
183 Ga0495582_0002309 3300046473 Bacteria 10685
184 Ga0495605_0003865 3300046474 Bacteria 8888
185 Ga0495662_0006673 3300046476 Bacteria 5753
186 Ga0495664_0000261 3300046477 Bacteria 25528
187 Ga0495664_0000964 3300046477 Bacteria 14800
188 Ga0495585_0074990 3300046492 Bacteria 1840
189 Ga0495606_0034029 3300046507 Bacteria 3504
190 Ga0495618_0002893 3300046514 Bacteria 10875
191 Ga0495618_0005415 3300046514 Bacteria 7783
192 Ga0495620_0005407 3300046515 Bacteria 7129
193 Ga0495628_0009884 3300046516 Bacteria 8122
194 Ga0495628_0012017 3300046516 Bacteria 7303
195 Ga0495630_0000512 3300046517 Bacteria 28672
196 Ga0495630_0024042 3300046517 Bacteria 4505
197 Ga0495631_0097049 3300046518 Bacteria 1269
198 Ga0495644_0008293 3300046523 Bacteria 4001
199 Ga0495648_0016444 3300046524 Bacteria 5336
200 Ga0495648_0027511 3300046524 Bacteria 3804
201 Ga0495648_0029384 3300046524 Bacteria 3648
202 Ga0495666_0000103 3300046526 Bacteria 34502
203 Ga0495666_0002833 3300046526 Bacteria 8680
204 Ga0495642_0087144 3300046528 Bacteria 1319
205 Ga0495652_0001284 3300046529 Bacteria 28084
206 Ga0495665_0000233 3300046531 Bacteria 28084
207 Ga0495640_0003928 3300046533 Bacteria 11909
208 Ga0495640_0004376 3300046533 Bacteria 11274
209 Ga0495586_0000365 3300046535 Bacteria 28006
210 Ga0495586_0002040 3300046535 Bacteria 10968
211 Ga0495587_0008554 3300046536 Bacteria 6575
212 Ga0495645_0000480 3300046543 Bacteria 27638
213 Ga0495645_0006185 3300046543 Bacteria 8288
214 Ga0495634_0000937 3300046642 Bacteria 27650
215 Ga0495611_0018407 3300046648 Bacteria 2996
216 Ga0495611_0034153 3300046648 Bacteria 2247
217 Ga0495625_0014512 3300046660 Bacteria 6280
218 Ga0495635_0001129 3300046663 Bacteria 17790
219 Ga0495635_0002633 3300046663 Bacteria 12282
220 Ga0495661_0001041 3300046665 Bacteria 24617
221 Ga0495661_0003599 3300046665 Bacteria 11408
222 Ga0495661_0068053 3300046665 Bacteria 2090
223 Ga0495588_0007117 3300046674 Bacteria 5072
224 Ga0495599_0003481 3300046678 Bacteria 9212
225 Ga0495599_0005961 3300046678 Bacteria 7328
226 Ga0495623_0099501 3300046679 Bacteria 1773
227 Ga0495646_0000233 3300046680 Bacteria 27641
228 Ga0495613_0001368 3300046689 Bacteria 18584
229 Ga0495624_0000625 3300046690 Bacteria 27666
230 Ga0495670_0005645 3300046691 Bacteria 6135
231 Ga0495671_0006877 3300046692 Bacteria 6526
232 Ga0495589_0012575 3300046794 Bacteria 4380
233 Ga0495589_0076591 3300046794 Bacteria 1631
234 Ga0495600_0221007 3300046809 Bacteria 1212
235 Ga0495600_0224094 3300046809 Bacteria 1202
236 Ga0495581_0000632 3300047315 Bacteria 18401
237 Ga0495581_0001799 3300047315 Bacteria 11973
238 Ga0495604_0002687 3300047317 Bacteria 14258
239 Ga0495604_0012180 3300047317 Bacteria 6836
240 Ga0495674_0000945 3300047319 Bacteria 27666
241 Ga0495672_0018829 3300047320 Bacteria 4573
242 Ga0495672_0044232 3300047320 Bacteria 2673
243 Ga0495676_0001514 3300047321 Bacteria 20095
244 Ga0495680_0001203 3300047322 Bacteria 28389
245 Ga0495683_0032468 3300047323 Bacteria 2659
246 Ga0495687_035658 3300047443 Bacteria 2234
247 Ga0495675_0002319 3300047444 Bacteria 11374
248 Ga0495679_000069 3300047446 Bacteria 99286
249 Ga0495679_000820 3300047446 Bacteria 19744
250 Ga0495679_001310 3300047446 Bacteria 14490
251 Ga0495685_052941 3300047447 Bacteria 1374
252 Ga0495681_0049052 3300047470 Bacteria 1998
253 Ga0495681_0077519 3300047470 Bacteria 1491
254 Ga0495684_0003654 3300047471 Bacteria 11986
255 Ga0495686_0000087 3300047472 Bacteria 196747
256 Ga0495686_0000812 3300047472 Bacteria 40457
257 Ga0495686_0001868 3300047472 Bacteria 21135
258 Ga0495686_0010063 3300047472 Bacteria 6756
259 Ga0495686_0074438 3300047472 Bacteria 2084
260 Ga0495686_0085232 3300047472 Bacteria 1924
261 Ga0495593_0001495 3300047673 Bacteria 13755
262 Ga0495602_0002606 3300048088 Bacteria 18420
263 Ga0495614_0000346 3300048089 Bacteria 18425
264 Ga0495626_0083940 3300048091 Bacteria 1410
265 Ga0496104_0002229 3300048907 Bacteria 16737
266 Ga0496105_0214179 3300048908 Bacteria 1570
267 Ga0496106_0027969 3300048909 Bacteria 4198
268 Ga0496106_0209655 3300048909 Bacteria 1552
269 Ga0496107_0076991 3300048910 Bacteria 2430
270 Ga0496107_0280429 3300048910 Bacteria 1240
271 Ga0496114_0038989 3300048917 Bacteria 3932
272 Ga0496114_0529951 3300048917 Bacteria 1041
273 Ga0496115_0106125 3300048918 Bacteria 2306
274 Ga0496116_0001792 3300048919 Bacteria 23352
275 Ga0496116_0134293 3300048919 Bacteria 1404
276 Ga0496117_0002393 3300048920 Bacteria 23847
277 Ga0496117_0004373 3300048920 Bacteria 15669
278 Ga0496118_0003472 3300048921 Bacteria 19786
279 Ga0496121_0000694 3300048924 Bacteria 62818
280 Ga0496122_0003397 3300048925 Bacteria 20952
281 Ga0496122_0008136 3300048925 Bacteria 11421
282 Ga0496124_0158966 3300048927 Bacteria 1764
283 Ga0496125_0080674 3300048928 Bacteria 2489
284 Ga0496126_0000042 3300048929 Bacteria 340121
285 Ga0496126_0000105 3300048929 Bacteria 198893
286 Ga0496126_0022564 3300048929 Bacteria 6121
287 Ga0496126_0428124 3300048929 Bacteria 1069
288 Ga0501291_034276 3300049514 Archaea 869
289 Ga0501031_0017506 3300049568 Archaea 4658
290 Ga0501032_0204626 3300049569 Archaea 1288
291 Ga0501033_0002711 3300049570 Bacteria 14854
292 Ga0501034_0003886 3300049571 Bacteria 16808
293 Ga0501034_0094701 3300049571 Bacteria 2983
294 Ga0501036_0196388 3300049572 Archaea 1697
295 Ga0501037_0064787 3300049573 Archaea 2663
296 Ga0501038_0053206 3300049574 Archaea 3487
297 Ga0501039_0039149 3300049575 Archaea 3661
298 Ga0501040_0035764 3300049576 Archaea 3369
299 Ga0501040_0324341 3300049576 Bacteria 1102
300 Ga0501041_0021428 3300049577 Archaea 3872
301 Ga0501042_0022530 3300049578 Archaea 4400
302 Ga0501042_0141397 3300049578 Archaea 1736
303 Ga0501046_0086635 3300049580 Archaea 2414
304 Ga0501071_0023789 3300049587 Archaea 4280
305 Ga0501071_0072195 3300049587 Archaea 2517
306 Ga0501072_0043692 3300049588 Archaea 3522
307 Ga0501072_0335108 3300049588 Bacteria 1202
308 Ga0501075_0074352 3300049591 Archaea 2570
309 Ga0501075_0106832 3300049591 Archaea 2127
310 Ga0501076_0051297 3300049592 Bacteria 3266
311 Ga0501077_0075992 3300049593 Archaea 2127
312 Ga0501080_0153576 3300049742 Archaea 2127
313 Ga0501080_0272945 3300049742 Bacteria 1539
314 Ga0501081_0044691 3300049743 Archaea 3041
315 Ga0501081_0171074 3300049743 Archaea 1568
316 Ga0501045_0058549 3300049824 Archaea 2821
317 nmdc:mga09592_32923_c1 3300050508 Bacteria 4323
318 nmdc:mga06r32_236371_c1 3300050510 Bacteria 1514
319 nmdc:mga0rr50_90586_c1 3300050513 Bacteria 2380
320 Ga0495601_0046464 3300053077 Bacteria 2733
321 Ga0495601_0114047 3300053077 Bacteria 1752
322 Ga0495655_0055911 3300053083 Unclassified 1060
323 Ga0495619_0004622 3300053085 Bacteria 8776
324 Ga0501084_0019642 3300054114 Archaea 5630
325 Ga0501084_0059675 3300054114 Archaea 3193
326 Ga0501082_0031701 3300060353 Archaea 4559
327 Ga0501082_0074239 3300060353 Archaea 2929
328 Ga0530510_0029110 3300061734 Bacteria 3963
329 Ga0530510_0081245 3300061734 Archaea 2359

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049514 Ga0501291_034276 Ga0501291_034276_46_855 263
2 3300041512 Ga0451853_2571041 Ga0451853_2571041_27_836 268
3 3300049578 Ga0501042_0141397 Ga0501042_0141397_49_906 283
4 3300049575 Ga0501039_0039149 Ga0501039_0039149_54_929 286
5 3300049580 Ga0501046_0086635 Ga0501046_0086635_1518_2393 286
6 3300049587 Ga0501071_0072195 Ga0501071_0072195_17_892 286
7 3300049588 Ga0501072_0043692 Ga0501072_0043692_49_924 286
8 3300049591 Ga0501075_0106832 Ga0501075_0106832_1184_2059 286
9 3300049743 Ga0501081_0171074 Ga0501081_0171074_646_1521 286
10 3300061734 Ga0530510_0081245 Ga0530510_0081245_1462_2337 286
11 3300005518 Ga0070699_100161795 Ga0070699_1001617952 297
12 3300005339 Ga0070660_100023659 Ga0070660_1000236591 298
13 3300005530 Ga0070679_100038687 Ga0070679_1000386871 298
14 3300005563 Ga0068855_100002929 Ga0068855_10000292917 298
15 3300013102 Ga0157371_10000584 Ga0157371_1000058422 298
16 3300013104 Ga0157370_10012968 Ga0157370_100129687 298
17 3300013307 Ga0157372_10008116 Ga0157372_100081168 298
18 3300037312 Ga0395899_0052024 Ga0395899_0052024_328_1308 298
19 3300037418 Ga0395900_0463547 Ga0395900_0463547_68_1048 298
20 3300037466 Ga0395898_0009255 Ga0395898_0009255_7312_8292 298
21 3300038443 Ga0395901_0003994 Ga0395901_0003994_7148_8128 298
22 3300009545 Ga0105237_10005078 Ga0105237_100050785 301
23 3300025914 Ga0207671_10002570 Ga0207671_100025708 301
24 3300005438 Ga0070701_10002176 Ga0070701_100021766 302
25 iso_pu_bacteria 2897803580 2897809671 302
26 3300049742 Ga0501080_0272945 Ga0501080_0272945_442_1383 303
27 3300013102 Ga0157371_10044795 Ga0157371_100447951 304
28 3300013307 Ga0157372_10101012 Ga0157372_101010121 304
29 3300031595 Ga0265313_10000194 Ga0265313_1000019456 304
30 3300049570 Ga0501033_0002711 Ga0501033_0002711_5786_6709 305
31 3300037418 Ga0395900_0115678 Ga0395900_0115678_936_1910 308
32 3300037466 Ga0395898_0167565 Ga0395898_0167565_452_1426 308
33 3300009553 Ga0105249_10063394 Ga0105249_100633942 309
34 3300014497 Ga0182008_10146218 Ga0182008_101462181 309
35 3300028800 Ga0265338_10016000 Ga0265338_100160005 310
36 3300031249 Ga0265339_10095136 Ga0265339_100951361 310
37 3300031595 Ga0265313_10123034 Ga0265313_101230341 311
38 3300037853 Ga0436364_1018519 Ga0436364_1018519_1590_2540 311
39 3300048908 Ga0496105_0214179 Ga0496105_0214179_331_1278 311
40 3300048918 Ga0496115_0106125 Ga0496115_0106125_490_1437 311
41 3300005366 Ga0070659_100004616 Ga0070659_1000046168 312
42 3300021441 Ga0213871_10005517 Ga0213871_100055172 312
43 3300025949 Ga0207667_10134098 Ga0207667_101340981 312
44 3300039438 Ga0436360_0130692 Ga0436360_0130692_5637_6590 312
45 3300039447 Ga0436361_0447095 Ga0436361_0447095_1324_2277 312
46 3300039453 Ga0436362_1049175 Ga0436362_1049175_1539_2492 312
47 iso_pu_bacteria 8033684223 8033689542 313
48 3300005468 Ga0070707_100354555 Ga0070707_1003545552 314
49 3300024227 Ga0228598_1000227 Ga0228598_10002275 314
50 3300048910 Ga0496107_0280429 Ga0496107_0280429_278_1225 314
51 3300048917 Ga0496114_0529951 Ga0496114_0529951_59_1006 314
52 3300048920 Ga0496117_0002393 Ga0496117_0002393_4657_5604 314
53 3300048921 Ga0496118_0003472 Ga0496118_0003472_4596_5543 314
54 3300048929 Ga0496126_0000105 Ga0496126_0000105_41077_42024 314
55 iso_pu_bacteria 3001892409 3001894987 314
56 3300005439 Ga0070711_100001028 Ga0070711_10000102811 315
57 3300006175 Ga0070712_100018529 Ga0070712_1000185292 315
58 3300007788 Ga0099795_10000532 Ga0099795_100005323 315
59 3300010159 Ga0099796_10000378 Ga0099796_100003784 315
60 3300025915 Ga0207693_10012683 Ga0207693_100126835 315
61 3300025916 Ga0207663_10013026 Ga0207663_100130263 315
62 3300028017 Ga0265356_1002722 Ga0265356_10027223 315
63 3300028036 Ga0265355_1000052 Ga0265355_10000523 315
64 3300028800 Ga0265338_10001894 Ga0265338_1000189415 315
65 3300028800 Ga0265338_10020367 Ga0265338_100203672 315
66 3300030760 Ga0265762_1000839 Ga0265762_10008393 315
67 3300031090 Ga0265760_10001064 Ga0265760_100010646 315
68 3300031090 Ga0265760_10001542 Ga0265760_100015423 315
69 3300031090 Ga0265760_10002537 Ga0265760_100025372 315
70 3300034816 Ga0373930_0000544 Ga0373930_0000544_495_1451 315
71 3300035084 Ga0373928_0012839 Ga0373928_0012839_545_1501 315
72 3300035112 Ga0373932_0012142 Ga0373932_0012142_60_1016 315
73 3300035691 Ga0373931_0000010 Ga0373931_0000010_306986_307942 315
74 3300035691 Ga0373931_0000171 Ga0373931_0000171_17523_18479 315
75 3300048909 Ga0496106_0209655 Ga0496106_0209655_232_1224 315
76 3300050513 nmdc:mga0rr50_90586_c1 nmdc:mga0rr50_90586_c1_105_1070 315
77 iso_pu_bacteria 2510917027 2511176739 315
78 iso_pu_bacteria 2857460504 2857462351 315
79 iso_pu_bacteria 2915606848 2915611589 315
80 3300005937 Ga0081455_10154138 Ga0081455_101541382 316
81 3300021384 Ga0213876_10010541 Ga0213876_100105412 316
82 3300025261 Ga0209233_1014744 Ga0209233_10147442 316
83 3300031727 Ga0316576_10007623 Ga0316576_100076236 316
84 3300032133 Ga0316583_10024852 Ga0316583_100248521 316
85 3300035398 Ga0316574_0039589 Ga0316574_0039589_284_1252 316
86 3300036712 Ga0316584_0227790 Ga0316584_0227790_303_1265 316
87 3300037853 Ga0436364_1170381 Ga0436364_1170381_1202_2176 316
88 3300044712 Ga0453684_0189097 Ga0453684_0189097_306_1259 316
89 3300044712 Ga0453684_0419143 Ga0453684_0419143_381_1331 316
90 3300044712 Ga0453684_0431858 Ga0453684_0431858_440_1393 316
91 3300048929 Ga0496126_0000042 Ga0496126_0000042_15949_16908 316
92 3300053077 Ga0495601_0046464 Ga0495601_0046464_82_1056 316
93 3300053077 Ga0495601_0114047 Ga0495601_0114047_275_1249 316
94 3300053085 Ga0495619_0004622 Ga0495619_0004622_3053_4027 316
95 iso_pu_bacteria 2840677318 2840679399 316
96 iso_pu_bacteria 2896085136 2896087210 316
97 3300003320 rootH2_10040182 rootH2_100401824 317
98 3300003758 Ga0055532_1000917 Ga0055532_100091710 317
99 3300005355 Ga0070671_100345602 Ga0070671_1003456021 317
100 3300005364 Ga0070673_100194611 Ga0070673_1001946112 317
101 3300005439 Ga0070711_100010796 Ga0070711_1000107963 317
102 3300025229 Ga0209147_100136 Ga0209147_10013647 317
103 3300025916 Ga0207663_10006724 Ga0207663_100067243 317
104 3300025960 Ga0207651_10372448 Ga0207651_103724482 317
105 3300028016 Ga0265354_1000062 Ga0265354_10000622 317
106 3300030863 Ga0265766_1000013 Ga0265766_10000135 317
107 3300046463 Ga0495653_0125221 Ga0495653_0125221_826_1791 317
108 3300046809 Ga0495600_0224094 Ga0495600_0224094_179_1144 317
109 3300047472 Ga0495686_0000087 Ga0495686_0000087_95325_96290 317
110 3300047472 Ga0495686_0074438 Ga0495686_0074438_776_1741 317
111 3300048907 Ga0496104_0002229 Ga0496104_0002229_11531_12496 317
112 iso_pu_bacteria 3006978542 3006981398 317
113 3300005434 Ga0070709_10084639 Ga0070709_100846392 318
114 3300005437 Ga0070710_10034326 Ga0070710_100343262 318
115 3300006173 Ga0070716_100000837 Ga0070716_1000008379 318
116 3300006175 Ga0070712_100022937 Ga0070712_1000229373 318
117 3300014968 Ga0157379_10136512 Ga0157379_101365121 318
118 3300025898 Ga0207692_10110129 Ga0207692_101101292 318
119 3300025906 Ga0207699_10041754 Ga0207699_100417542 318
120 3300025915 Ga0207693_10004466 Ga0207693_100044662 318
121 3300025916 Ga0207663_10046324 Ga0207663_100463241 318
122 3300025939 Ga0207665_10002558 Ga0207665_100025582 318
123 3300047472 Ga0495686_0001868 Ga0495686_0001868_8950_9921 318
124 3300047472 Ga0495686_0010063 Ga0495686_0010063_1602_2573 318
125 3300049576 Ga0501040_0324341 Ga0501040_0324341_28_1020 318
126 3300049588 Ga0501072_0335108 Ga0501072_0335108_72_1049 318
127 3300049592 Ga0501076_0051297 Ga0501076_0051297_550_1542 318
128 3300061734 Ga0530510_0029110 Ga0530510_0029110_319_1311 318
129 3300049591 Ga0501075_0074352 Ga0501075_0074352_996_1970 319
130 3300049743 Ga0501081_0044691 Ga0501081_0044691_1720_2694 319
131 3300054114 Ga0501084_0059675 Ga0501084_0059675_1972_2946 319
132 3300060353 Ga0501082_0031701 Ga0501082_0031701_652_1626 319
133 iso_pu_bacteria 2738541283 2738758604 319
134 iso_pu_bacteria 2751185877 2753671168 319
135 iso_pu_bacteria 2896109856 2896114870 319
136 iso_pu_bacteria 3003233435 3003234314 319
137 iso_pu_bacteria 8054844752 8054847447 319
138 3300003578 Ga0006562J51391_1019581 Ga0006562J51391_10195812 320
139 3300024227 Ga0228598_1016675 Ga0228598_10166752 320
140 3300028017 Ga0265356_1000847 Ga0265356_10008474 320
141 3300028800 Ga0265338_10049062 Ga0265338_100490623 320
142 3300031090 Ga0265760_10000126 Ga0265760_1000012610 320
143 3300031241 Ga0265325_10040332 Ga0265325_100403323 320
144 3300031344 Ga0265316_10052607 Ga0265316_100526073 320
145 iso_pu_bacteria 2721755487 2722729476 320
146 iso_pu_bacteria 2857460504 2857464643 320
147 iso_pu_bacteria 2904780799 2904781138 320
148 iso_pu_bacteria 2919177583 2919178741 320
149 iso_pu_bacteria 2919414237 2919416294 320
150 3300003320 rootH2_10025899 rootH2_100258992 321
151 3300003323 rootH1_10063127 rootH1_100631272 321
152 3300003323 rootH1_10067010 rootH1_1006701010 321
153 3300003323 rootH1_10089459 rootH1_100894593 321
154 3300005539 Ga0068853_100097441 Ga0068853_1000974412 321
155 3300006844 Ga0075428_100088140 Ga0075428_1000881405 321
156 3300006847 Ga0075431_100123747 Ga0075431_1001237474 321
157 3300006852 Ga0075433_10212379 Ga0075433_102123792 321
158 3300006880 Ga0075429_100061093 Ga0075429_1000610935 321
159 3300009093 Ga0105240_10009231 Ga0105240_1000923110 321
160 3300009176 Ga0105242_10041159 Ga0105242_100411594 321
161 3300009177 Ga0105248_10038554 Ga0105248_100385543 321
162 3300009177 Ga0105248_10120941 Ga0105248_101209413 321
163 3300009545 Ga0105237_10011485 Ga0105237_100114853 321
164 3300009551 Ga0105238_10025767 Ga0105238_100257673 321
165 3300010375 Ga0105239_10001549 Ga0105239_1000154930 321
166 3300013308 Ga0157375_10021985 Ga0157375_100219856 321
167 3300014497 Ga0182008_10009803 Ga0182008_100098033 321
168 3300014969 Ga0157376_10000949 Ga0157376_1000094910 321
169 3300025913 Ga0207695_10030297 Ga0207695_100302971 321
170 3300025914 Ga0207671_10001984 Ga0207671_100019848 321
171 3300025924 Ga0207694_10056641 Ga0207694_100566412 321
172 3300025941 Ga0207711_10035325 Ga0207711_100353253 321
173 3300025941 Ga0207711_10391527 Ga0207711_103915271 321
174 3300026067 Ga0207678_10170865 Ga0207678_101708652 321
175 3300030878 Ga0265770_1003981 Ga0265770_10039812 321
176 3300031090 Ga0265760_10017593 Ga0265760_100175933 321
177 3300031595 Ga0265313_10034524 Ga0265313_100345242 321
178 3300031733 Ga0316577_10035510 Ga0316577_100355103 321
179 3300032133 Ga0316583_10010397 Ga0316583_100103974 321
180 3300036647 Ga0316582_0079664 Ga0316582_0079664_757_1746 321
181 3300036647 Ga0316582_0109752 Ga0316582_0109752_105_1094 321
182 3300037312 Ga0395899_0048856 Ga0395899_0048856_1010_1981 321
183 3300037312 Ga0395899_0125404 Ga0395899_0125404_14_985 321
184 3300037418 Ga0395900_0213931 Ga0395900_0213931_123_1094 321
185 3300037418 Ga0395900_0219238 Ga0395900_0219238_598_1569 321
186 3300037466 Ga0395898_0121129 Ga0395898_0121129_1166_2137 321
187 3300038443 Ga0395901_0278501 Ga0395901_0278501_81_1052 321
188 3300038741 Ga0400488_05767 Ga0400488_05767_1683_2666 321
189 3300039062 Ga0400483_014790 Ga0400483_014790_3227_4198 321
190 3300039062 Ga0400483_221765 Ga0400483_221765_1079_2074 321
191 3300039110 Ga0400487_01137 Ga0400487_01137_7592_8566 321
192 3300044658 Ga0466972_0000407 Ga0466972_0000407_4644_5633 321
193 3300044683 Ga0466965_0001924 Ga0466965_0001924_2673_3662 321
194 3300044735 Ga0466968_0000597 Ga0466968_0000597_10840_11829 321
195 3300046454 Ga0495592_0021215 Ga0495592_0021215_39_1016 321
196 3300046455 Ga0495603_0000760 Ga0495603_0000760_5669_6646 321
197 3300046457 Ga0495590_0001491 Ga0495590_0001491_326_1312 321
198 3300046459 Ga0495629_0001443 Ga0495629_0001443_12659_13636 321
199 3300046460 Ga0495638_0014379 Ga0495638_0014379_692_1678 321
200 3300046461 Ga0495641_0007642 Ga0495641_0007642_3557_4534 321
201 3300046461 Ga0495641_0018962 Ga0495641_0018962_1648_2625 321
202 3300046462 Ga0495651_0043356 Ga0495651_0043356_1848_2825 321
203 3300046462 Ga0495651_0111327 Ga0495651_0111327_567_1544 321
204 3300046463 Ga0495653_0000578 Ga0495653_0000578_5109_6086 321
205 3300046471 Ga0495650_0020533 Ga0495650_0020533_1778_2755 321
206 3300046472 Ga0495580_0000763 Ga0495580_0000763_5669_6646 321
207 3300046472 Ga0495580_0003133 Ga0495580_0003133_6253_7230 321
208 3300046472 Ga0495580_0014385 Ga0495580_0014385_658_1644 321
209 3300046472 Ga0495580_0018601 Ga0495580_0018601_3242_4228 321
210 3300046473 Ga0495582_0000320 Ga0495582_0000320_5641_6618 321
211 3300046473 Ga0495582_0002309 Ga0495582_0002309_6252_7229 321
212 3300046474 Ga0495605_0003865 Ga0495605_0003865_3467_4444 321
213 3300046476 Ga0495662_0006673 Ga0495662_0006673_766_1743 321
214 3300046477 Ga0495664_0000261 Ga0495664_0000261_20843_21820 321
215 3300046477 Ga0495664_0000964 Ga0495664_0000964_7321_8298 321
216 3300046492 Ga0495585_0074990 Ga0495585_0074990_110_1087 321
217 3300046507 Ga0495606_0034029 Ga0495606_0034029_1293_2279 321
218 3300046514 Ga0495618_0002893 Ga0495618_0002893_5658_6635 321
219 3300046514 Ga0495618_0005415 Ga0495618_0005415_621_1598 321
220 3300046515 Ga0495620_0005407 Ga0495620_0005407_1085_2071 321
221 3300046516 Ga0495628_0009884 Ga0495628_0009884_203_1180 321
222 3300046516 Ga0495628_0012017 Ga0495628_0012017_3960_4937 321
223 3300046517 Ga0495630_0000512 Ga0495630_0000512_5669_6646 321
224 3300046517 Ga0495630_0024042 Ga0495630_0024042_3457_4434 321
225 3300046518 Ga0495631_0097049 Ga0495631_0097049_251_1228 321
226 3300046523 Ga0495644_0008293 Ga0495644_0008293_132_1109 321
227 3300046524 Ga0495648_0016444 Ga0495648_0016444_3014_3991 321
228 3300046524 Ga0495648_0027511 Ga0495648_0027511_2553_3530 321
229 3300046524 Ga0495648_0029384 Ga0495648_0029384_199_1185 321
230 3300046526 Ga0495666_0000103 Ga0495666_0000103_5647_6624 321
231 3300046526 Ga0495666_0002833 Ga0495666_0002833_7055_8032 321
232 3300046528 Ga0495642_0087144 Ga0495642_0087144_158_1144 321
233 3300046529 Ga0495652_0001284 Ga0495652_0001284_21439_22416 321
234 3300046531 Ga0495665_0000233 Ga0495665_0000233_21439_22416 321
235 3300046533 Ga0495640_0003928 Ga0495640_0003928_6234_7211 321
236 3300046533 Ga0495640_0004376 Ga0495640_0004376_7523_8500 321
237 3300046535 Ga0495586_0000365 Ga0495586_0000365_21361_22338 321
238 3300046535 Ga0495586_0002040 Ga0495586_0002040_3049_4026 321
239 3300046536 Ga0495587_0008554 Ga0495587_0008554_4785_5762 321
240 3300046543 Ga0495645_0000480 Ga0495645_0000480_21021_21998 321
241 3300046543 Ga0495645_0006185 Ga0495645_0006185_6969_7946 321
242 3300046642 Ga0495634_0000937 Ga0495634_0000937_5653_6630 321
243 3300046648 Ga0495611_0018407 Ga0495611_0018407_496_1473 321
244 3300046648 Ga0495611_0034153 Ga0495611_0034153_359_1345 321
245 3300046660 Ga0495625_0014512 Ga0495625_0014512_3858_4844 321
246 3300046663 Ga0495635_0001129 Ga0495635_0001129_5631_6608 321
247 3300046663 Ga0495635_0002633 Ga0495635_0002633_4699_5676 321
248 3300046665 Ga0495661_0001041 Ga0495661_0001041_17995_18972 321
249 3300046665 Ga0495661_0003599 Ga0495661_0003599_6943_7920 321
250 3300046665 Ga0495661_0068053 Ga0495661_0068053_546_1532 321
251 3300046674 Ga0495588_0007117 Ga0495588_0007117_521_1498 321
252 3300046678 Ga0495599_0003481 Ga0495599_0003481_6898_7875 321
253 3300046678 Ga0495599_0005961 Ga0495599_0005961_684_1661 321
254 3300046679 Ga0495623_0099501 Ga0495623_0099501_619_1596 321
255 3300046680 Ga0495646_0000233 Ga0495646_0000233_21008_21985 321
256 3300046689 Ga0495613_0001368 Ga0495613_0001368_11781_12758 321
257 3300046690 Ga0495624_0000625 Ga0495624_0000625_21021_21998 321
258 3300046691 Ga0495670_0005645 Ga0495670_0005645_5128_6105 321
259 3300046692 Ga0495671_0006877 Ga0495671_0006877_2070_3056 321
260 3300046794 Ga0495589_0012575 Ga0495589_0012575_2387_3364 321
261 3300046794 Ga0495589_0076591 Ga0495589_0076591_507_1484 321
262 3300046809 Ga0495600_0221007 Ga0495600_0221007_19_996 321
263 3300047315 Ga0495581_0000632 Ga0495581_0000632_5644_6621 321
264 3300047315 Ga0495581_0001799 Ga0495581_0001799_4735_5712 321
265 3300047317 Ga0495604_0002687 Ga0495604_0002687_7020_7997 321
266 3300047317 Ga0495604_0012180 Ga0495604_0012180_1699_2676 321
267 3300047319 Ga0495674_0000945 Ga0495674_0000945_21021_21998 321
268 3300047320 Ga0495672_0018829 Ga0495672_0018829_1502_2488 321
269 3300047320 Ga0495672_0044232 Ga0495672_0044232_904_1923 321
270 3300047321 Ga0495676_0001514 Ga0495676_0001514_5147_6124 321
271 3300047322 Ga0495680_0001203 Ga0495680_0001203_6392_7369 321
272 3300047323 Ga0495683_0032468 Ga0495683_0032468_1501_2478 321
273 3300047443 Ga0495687_035658 Ga0495687_035658_333_1319 321
274 3300047444 Ga0495675_0002319 Ga0495675_0002319_6969_7946 321
275 3300047446 Ga0495679_000069 Ga0495679_000069_26949_27935 321
276 3300047446 Ga0495679_000820 Ga0495679_000820_13099_14076 321
277 3300047446 Ga0495679_001310 Ga0495679_001310_7261_8238 321
278 3300047447 Ga0495685_052941 Ga0495685_052941_272_1249 321
279 3300047470 Ga0495681_0049052 Ga0495681_0049052_355_1332 321
280 3300047470 Ga0495681_0077519 Ga0495681_0077519_169_1146 321
281 3300047471 Ga0495684_0003654 Ga0495684_0003654_4883_5860 321
282 3300047472 Ga0495686_0085232 Ga0495686_0085232_175_1152 321
283 3300047673 Ga0495593_0001495 Ga0495593_0001495_8363_9340 321
284 3300048088 Ga0495602_0002606 Ga0495602_0002606_5669_6646 321
285 3300048089 Ga0495614_0000346 Ga0495614_0000346_11781_12758 321
286 3300048091 Ga0495626_0083940 Ga0495626_0083940_101_1087 321
287 3300048909 Ga0496106_0027969 Ga0496106_0027969_1695_2672 321
288 3300048910 Ga0496107_0076991 Ga0496107_0076991_269_1261 321
289 3300048917 Ga0496114_0038989 Ga0496114_0038989_2116_3093 321
290 3300048919 Ga0496116_0134293 Ga0496116_0134293_302_1279 321
291 3300048924 Ga0496121_0000694 Ga0496121_0000694_40859_41851 321
292 3300048929 Ga0496126_0022564 Ga0496126_0022564_1996_2988 321
293 3300048929 Ga0496126_0428124 Ga0496126_0428124_44_1021 321
294 3300049571 Ga0501034_0003886 Ga0501034_0003886_3238_4203 321
295 3300049571 Ga0501034_0094701 Ga0501034_0094701_800_1765 321
296 3300050508 nmdc:mga09592_32923_c1 nmdc:mga09592_32923_c1_1949_2950 321
297 3300050510 nmdc:mga06r32_236371_c1 nmdc:mga06r32_236371_c1_45_1046 321
298 3300053083 Ga0495655_0055911 Ga0495655_0055911_62_1048 321
299 3300049568 Ga0501031_0017506 Ga0501031_0017506_1335_2327 322
300 3300049569 Ga0501032_0204626 Ga0501032_0204626_277_1269 322
301 3300049572 Ga0501036_0196388 Ga0501036_0196388_39_1031 322
302 3300049573 Ga0501037_0064787 Ga0501037_0064787_660_1652 322
303 3300049574 Ga0501038_0053206 Ga0501038_0053206_1177_2169 322
304 3300049576 Ga0501040_0035764 Ga0501040_0035764_348_1340 322
305 3300049577 Ga0501041_0021428 Ga0501041_0021428_679_1671 322
306 3300049578 Ga0501042_0022530 Ga0501042_0022530_2055_3047 322
307 3300049587 Ga0501071_0023789 Ga0501071_0023789_3257_4249 322
308 3300049593 Ga0501077_0075992 Ga0501077_0075992_794_1786 322
309 3300049742 Ga0501080_0153576 Ga0501080_0153576_111_1103 322
310 3300049824 Ga0501045_0058549 Ga0501045_0058549_1086_2078 322
311 3300054114 Ga0501084_0019642 Ga0501084_0019642_3372_4364 322
312 3300060353 Ga0501082_0074239 Ga0501082_0074239_600_1592 322
313 3300009545 Ga0105237_10005209 Ga0105237_1000520911 323
314 3300013104 Ga0157370_10002932 Ga0157370_100029329 323
315 3300014497 Ga0182008_10000989 Ga0182008_100009894 323
316 3300015261 Ga0182006_1000197 Ga0182006_100019746 323
317 3300017792 Ga0163161_10015106 Ga0163161_100151064 323
318 3300025914 Ga0207671_10021171 Ga0207671_100211715 323
319 3300048925 Ga0496122_0008136 Ga0496122_0008136_3479_4483 323
320 2162886007 SwRhRL2b_contig_1211701 SwRhRL2b_0320.00001050 324
321 3300003320 rootH2_10022576 rootH2_100225762 324
322 3300003322 rootL2_10194357 rootL2_101943572 324
323 3300003323 rootH1_10065401 rootH1_100654012 324
324 3300003323 rootH1_10084187 rootH1_100841872 324
325 3300005289 Ga0065704_10081737 Ga0065704_100817372 324
326 3300005327 Ga0070658_10053764 Ga0070658_100537644 324
327 3300005329 Ga0070683_100226455 Ga0070683_1002264553 324
328 3300005334 Ga0068869_100052187 Ga0068869_1000521873 324
329 3300005539 Ga0068853_100464741 Ga0068853_1004647411 324
330 3300005548 Ga0070665_100159390 Ga0070665_1001593903 324
331 3300005577 Ga0068857_100287022 Ga0068857_1002870221 324
332 3300009148 Ga0105243_10000025 Ga0105243_10000025148 324
333 3300009545 Ga0105237_10029401 Ga0105237_100294012 324
334 3300010375 Ga0105239_10355204 Ga0105239_103552042 324
335 3300025302 Ga0207426_1000019 Ga0207426_100001953 324
336 3300025912 Ga0207707_10452650 Ga0207707_104526501 324
337 3300025914 Ga0207671_10323976 Ga0207671_103239762 324
338 3300025935 Ga0207709_10000003 Ga0207709_10000003776 324
339 3300026116 Ga0207674_10448201 Ga0207674_104482012 324
340 3300028379 Ga0268266_10129221 Ga0268266_101292213 324
341 3300037312 Ga0395899_0000002 Ga0395899_0000002_290626_291606 324
342 3300047472 Ga0495686_0000812 Ga0495686_0000812_4499_5473 324
343 3300048919 Ga0496116_0001792 Ga0496116_0001792_12966_13940 324
344 3300048920 Ga0496117_0004373 Ga0496117_0004373_4071_5045 324
345 3300048925 Ga0496122_0003397 Ga0496122_0003397_7828_8802 324
346 3300048927 Ga0496124_0158966 Ga0496124_0158966_208_1182 324
347 3300048928 Ga0496125_0080674 Ga0496125_0080674_1437_2411 324

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00389

2-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

6

318

0.98

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

111

288

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bii-assembly1.cif.gz_B crystal structure of pyrococcus yayanosii glyoxylate hydroxypyruvate reductase in complex with nadp and malonate (re-refinement of 5aow) 0.9643 2 322
5aov-assembly1.cif.gz_A-2 ternary crystal structure of pyrococcus furiosus glyoxylate hydroxypyruvate reductase in presence of glyoxylate 0.9615 2 322
2dbq-assembly1.cif.gz_A crystal structure of glyoxylate reductase (ph0597) from pyrococcus horikoshii ot3, complexed with nadp (i41) 0.9563 2 322
6bii-assembly1.cif.gz_B crystal structure of pyrococcus yayanosii glyoxylate hydroxypyruvate reductase in complex with nadp and malonate (re-refinement of 5aow) 0.9527 2 322
2wwr-assembly2.cif.gz_B crystal structure of human glyoxylate reductase hydroxypyruvate reductase 0.9501 1 318
ID Description Score Start End Superfamily
af_Q2FZW9_121_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9837 145 286 3.40.50.720
af_Q7SZY8_153_293_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9781 145 286 3.40.50.720
af_Q2FZW9_121_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9769 145 286 3.40.50.720
af_Q2FVW4_141_284_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9751 141 286 3.40.50.720
af_Q9VII9_150_293_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9717 142 285 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A662V0C8-F1-model_v4 D-glycerate dehydrogenase 0.9934 226 319 GO:0005829
GO:0016618
GO:0030267
GO:0051287
AF-A0A1A8J120-F1-model_v4 Glyoxylate reductase/hydroxypyruvate reductase b 0.9899 192 314 GO:0005829
GO:0008465
GO:0030267
GO:0051287
AF-A0A7C7PH41-F1-model_v4 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding domain-containing protein 0.9848 231 321 GO:0051287
AF-X1MY22-F1-model_v4 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding domain-containing protein 0.984 210 319 GO:0016491
GO:0051287
AF-A0A832T0D7-F1-model_v4 deleted 0.984 207 309

Feature Viewer

pLDDT pTM Quality
96.62 0.92 High
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Predicted Structure (AlphaFold2)

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