F417135

General Info

Members Datasets Scaffolds Average Seq Length
347 169 652 561

Family's Representative Sequence

Representative Sequence 3300010159|Ga0099796_10000632|Ga0099796_100006323
Length 625
Sequence MSRTVRAAIAPGMMAGFSAGAASFKGDTRPFNDIFKPQSRLQTYQSTLGSALKRWLGEGLPMTDGPVSRSRWNRRDFLKTSAAAAAGAYAMRWGPGLAADVPFEFDGSKFQLAAPEPNPKRGGVLRYGITMRPPHFDVHQSGTINNLGSQGCMFDNLIRRDPRDSGKTIIPDLAHSWEIAKDGKTYTFHLRQGVQFHDGAELTAEDVKATFDRIAKPPQGIAIPRSVLFKAVSEITAPDKYTVQFKLAEPRPVNFIMSAIASGWNVIVRKKTLEDNNYNLRKVEIYPGTGPFRSKQRIENEKWVMERNPNYWNKGLPYLDGVEFYHALPFSTDLGSSILSGRTDYIRITDPVTARKAKEMPGLKTIAFNQSVIQGCWANSKKKPFDDPRVRRALHLAFDRHTLIDVVKDVTPMRVGGFIYPFSEFATPTEELFKRIGYQKDSTAAAKEAKALLDAAGHPNGIQGLDFLVRDVPSFKLWAQAIQAMLQETLNVQCNLRTVVESVWFDDTQNGHFDLAIGAIVSTLLDPSDYFNAWYRTGGPQNYGFWNNEKFNTLVDQIDREIDPDKRKDLVRQTEAIMEQDPPVLPVAWEQINDVWYDYVKGHNPKDYFGIYDVVRLDTFWLDKA

Samples

Sample ID Description Type Environment
1 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
46 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
60 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
61 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
83 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
85 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
86 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
87 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
88 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
89 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
90 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
96 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
97 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
109 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
110 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
111 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
116 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
117 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
118 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
119 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
122 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
125 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
126 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
127 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
130 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
131 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
132 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
133 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
134 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
135 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
141 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
142 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
143 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
153 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
157 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
160 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
163 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
164 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
165 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
166 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
167 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
168 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
169 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.71
Metatranscriptomes 0.29
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.17
Nodule 0
Rhizoplane 2.31
Rhizosphere 91.64
Stem 0
Stem Tuber 0
Unclassified 7.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099796_10000632 3300010159 Bacteria 6117
2 JGI25405J52794_10001292 3300003911 Plasmid 4074
3 Ga0058859_11769712 3300004798 Bacteria 2304
4 Ga0065707_10010394 3300005295 Bacteria 2318
5 Ga0070683_100007545 3300005329 Bacteria 9192
6 Ga0070709_10027768 3300005434 Bacteria 3368
7 Ga0070709_10082806 3300005434 Bacteria 2097
8 Ga0070714_100007326 3300005435 Bacteria 8580
9 Ga0070714_100030046 3300005435 Bacteria 4521
10 Ga0070714_100107966 3300005435 Bacteria 2460
11 Ga0070714_100140701 3300005435 Bacteria 2166
12 Ga0070714_100184845 3300005435 Bacteria 1898
13 Ga0070713_100051612 3300005436 Bacteria 3401
14 Ga0070713_100062266 3300005436 Unclassified 3125
15 Ga0070713_100063170 3300005436 Bacteria 3103
16 Ga0070713_100095969 3300005436 Bacteria 2559
17 Ga0070713_100156768 3300005436 Bacteria 2030
18 Ga0070710_10011632 3300005437 Bacteria 4352
19 Ga0070710_10057424 3300005437 Bacteria 2206
20 Ga0070710_10059788 3300005437 Bacteria 2165
21 Ga0070711_100028817 3300005439 Bacteria 3656
22 Ga0070711_100054547 3300005439 Bacteria 2758
23 Ga0070711_100077677 3300005439 Bacteria 2357
24 Ga0070711_100097763 3300005439 Bacteria 2129
25 Ga0070694_100025179 3300005444 Bacteria 3849
26 Ga0070678_100052069 3300005456 Bacteria 2970
27 Ga0070681_10040584 3300005458 Bacteria 4662
28 Ga0070681_10156785 3300005458 Bacteria 2201
29 Ga0070706_100097663 3300005467 Bacteria 2728
30 Ga0070706_100138934 3300005467 Bacteria 2268
31 Ga0070707_100005875 3300005468 Bacteria 11448
32 Ga0070698_100054563 3300005471 Bacteria 4056
33 Ga0070698_100111581 3300005471 Bacteria 2699
34 Ga0070699_100006938 3300005518 Bacteria 9850
35 Ga0070699_100095900 3300005518 Bacteria 2597
36 Ga0070699_100127930 3300005518 Bacteria 2238
37 Ga0070684_100025950 3300005535 Bacteria 4930
38 Ga0070695_100006725 3300005545 Bacteria 6804
39 Ga0070665_100075905 3300005548 Bacteria 3368
40 Ga0068855_100095226 3300005563 Bacteria 3432
41 Ga0070664_100014771 3300005564 Bacteria 6375
42 Ga0068857_100139017 3300005577 Bacteria 2195
43 Ga0068856_100012604 3300005614 Bacteria 8185
44 Ga0068856_100102411 3300005614 Unclassified 2857
45 Ga0068852_100017454 3300005616 Bacteria 5631
46 Ga0068864_100100775 3300005618 Bacteria 2561
47 Ga0081455_10000394 3300005937 Bacteria 57661
48 Ga0081455_10000637 3300005937 Bacteria 45442
49 Ga0081455_10001009 3300005937 Bacteria 35624
50 Ga0081455_10002079 3300005937 Bacteria 23872
51 Ga0081455_10006242 3300005937 Bacteria 12832
52 Ga0081455_10020078 3300005937 Bacteria 6304
53 Ga0081455_10088194 3300005937 Bacteria 2522
54 Ga0081538_10005150 3300005981 Bacteria 11848
55 Ga0081538_10020000 3300005981 Bacteria 4949
56 Ga0081538_10045909 3300005981 Bacteria 2702
57 Ga0081538_10051123 3300005981 Bacteria 2486
58 Ga0081540_1004858 3300005983 Bacteria 10129
59 Ga0081540_1005378 3300005983 Bacteria 9574
60 Ga0081540_1024024 3300005983 Bacteria 3546
61 Ga0081540_1042959 3300005983 Bacteria 2325
62 Ga0081539_10002595 3300005985 Bacteria 24800
63 Ga0081539_10005906 3300005985 Bacteria 12097
64 Ga0081539_10005926 3300005985 Bacteria 12070
65 Ga0070717_10011154 3300006028 Bacteria 6811
66 Ga0070717_10062005 3300006028 Bacteria 3100
67 Ga0070717_10125954 3300006028 Unclassified 2199
68 Ga0070712_100014672 3300006175 Bacteria 5030
69 Ga0070712_100024521 3300006175 Bacteria 3999
70 Ga0070712_100029824 3300006175 Bacteria 3660
71 Ga0070712_100031671 3300006175 Bacteria 3565
72 Ga0070712_100036701 3300006175 Bacteria 3336
73 Ga0075362_10004184 3300006177 Bacteria 5150
74 Ga0075367_10024408 3300006178 Bacteria 3409
75 Ga0075369_10002840 3300006186 Bacteria 6239
76 Ga0075369_10019758 3300006186 Bacteria 2754
77 Ga0075370_10065030 3300006353 Bacteria 2080
78 Ga0075428_100004118 3300006844 Bacteria 16008
79 Ga0075428_100024851 3300006844 Bacteria 6627
80 Ga0075428_100025104 3300006844 Bacteria 6593
81 Ga0075428_100040390 3300006844 Bacteria 5133
82 Ga0075428_100127371 3300006844 Bacteria 2770
83 Ga0075430_100019813 3300006846 Bacteria 5722
84 Ga0075431_100006552 3300006847 Bacteria 11568
85 Ga0075431_100019530 3300006847 Bacteria 6911
86 Ga0075431_100026772 3300006847 Bacteria 5914
87 Ga0075433_10075503 3300006852 Bacteria 2966
88 Ga0075433_10151278 3300006852 Bacteria 2065
89 Ga0075434_100007813 3300006871 Bacteria 9909
90 Ga0075434_100039290 3300006871 Bacteria 4688
91 Ga0075434_100047187 3300006871 Bacteria 4275
92 Ga0075429_100006387 3300006880 Bacteria 10199
93 Ga0075429_100018193 3300006880 Bacteria 6081
94 Ga0075429_100046681 3300006880 Unclassified 3768
95 Ga0075429_100063556 3300006880 Bacteria 3215
96 Ga0075429_100113210 3300006880 Bacteria 2371
97 Ga0075436_100025882 3300006914 Bacteria 4038
98 Ga0075436_100027555 3300006914 Bacteria 3909
99 Ga0075435_100011355 3300007076 Bacteria 6548
100 Ga0075435_100077297 3300007076 Bacteria 2729
101 Ga0099794_10006253 3300007265 Bacteria 4808
102 Ga0099795_10000611 3300007788 Bacteria 6859
103 Ga0099795_10009010 3300007788 Bacteria 2878
104 Ga0105240_10096125 3300009093 Bacteria 3611
105 Ga0111539_10012796 3300009094 Bacteria 10498
106 Ga0111539_10028692 3300009094 Bacteria 6787
107 Ga0114129_10068063 3300009147 Bacteria 4966
108 Ga0114129_10093211 3300009147 Bacteria 4172
109 Ga0114129_10228117 3300009147 Bacteria 2509
110 Ga0105242_10070033 3300009176 Bacteria 2907
111 Ga0105238_10063677 3300009551 Bacteria 3688
112 Ga0105249_10091108 3300009553 Unclassified 2852
113 Ga0099796_10000964 3300010159 Bacteria 5386
114 Ga0099796_10011202 3300010159 Bacteria 2494
115 Ga0157373_10038353 3300013100 Bacteria 3434
116 Ga0163162_10290258 3300013306 Bacteria 1767
117 Ga0157375_10045621 3300013308 Bacteria 4267
118 Ga0163163_10012662 3300014325 Bacteria 7691
119 Ga0182008_10037341 3300014497 Unclassified 2429
120 Ga0157379_10077157 3300014968 Bacteria 2983
121 Ga0213873_10011103 3300021358 Bacteria 1918
122 Ga0213875_10001505 3300021388 Bacteria 14993
123 Ga0213875_10007218 3300021388 Bacteria 5761
124 Ga0207426_1006630 3300025302 Bacteria 4982
125 Ga0207647_10030431 3300025904 Bacteria 3482
126 Ga0207684_10033746 3300025910 Bacteria 4352
127 Ga0207707_10050014 3300025912 Bacteria 3642
128 Ga0207695_10115383 3300025913 Bacteria 2660
129 Ga0207693_10007294 3300025915 Bacteria 9099
130 Ga0207693_10034656 3300025915 Bacteria 3982
131 Ga0207693_10042077 3300025915 Bacteria 3597
132 Ga0207693_10052593 3300025915 Plasmid 3195
133 Ga0207693_10062168 3300025915 Bacteria 2926
134 Ga0207693_10076226 3300025915 Bacteria 2626
135 Ga0207693_10091663 3300025915 Bacteria 2383
136 Ga0207663_10012604 3300025916 Unclassified 4577
137 Ga0207663_10019385 3300025916 Bacteria 3831
138 Ga0207663_10091099 3300025916 Bacteria 2023
139 Ga0207646_10009171 3300025922 Bacteria 9809
140 Ga0207646_10088526 3300025922 Bacteria 2771
141 Ga0207694_10072936 3300025924 Bacteria 2685
142 Ga0207659_10028633 3300025926 Bacteria 3788
143 Ga0207700_10022655 3300025928 Bacteria 4314
144 Ga0207700_10055709 3300025928 Bacteria 2972
145 Ga0207700_10070272 3300025928 Bacteria 2691
146 Ga0207700_10079745 3300025928 Unclassified 2550
147 Ga0207700_10083063 3300025928 Bacteria 2507
148 Ga0207664_10010390 3300025929 Bacteria 6574
149 Ga0207664_10058141 3300025929 Bacteria 3075
150 Ga0207664_10058854 3300025929 Unclassified 3058
151 Ga0207664_10139541 3300025929 Bacteria 2049
152 Ga0207644_10023409 3300025931 Bacteria 4230
153 Ga0207644_10058707 3300025931 Bacteria 2782
154 Ga0207670_10024493 3300025936 Bacteria 3773
155 Ga0207665_10086121 3300025939 Bacteria 2169
156 Ga0207665_10113171 3300025939 Bacteria 1909
157 Ga0207661_10018646 3300025944 Bacteria 5157
158 Ga0207679_10015053 3300025945 Bacteria 5100
159 Ga0207667_10031057 3300025949 Bacteria 5770
160 Ga0207703_10114410 3300026035 Bacteria 2307
161 Ga0207674_10080456 3300026116 Bacteria 3262
162 Ga0268264_10023580 3300028381 Bacteria 5017
163 Ga0265337_1011816 3300028556 Bacteria 2995
164 Ga0373923_0001063 3300035111 Bacteria 7521
165 Ga0373923_0003453 3300035111 Bacteria 5067
166 Ga0373923_0038280 3300035111 Unclassified 1965
167 Ga0373936_0003137 3300035113 Bacteria 6188
168 Ga0373936_0035813 3300035113 Unclassified 1977
169 Ga0373941_0009862 3300035115 Bacteria 2419
170 Ga0373953_0011861 3300035117 Bacteria 3071
171 Ga0373956_0058395 3300035119 Unclassified 1744
172 Ga0373957_0012871 3300035120 Bacteria 2826
173 Ga0373957_0038876 3300035120 Unclassified 1783
174 Ga0373943_0065801 3300035170 Bacteria 1824
175 Ga0373946_0007032 3300035171 Bacteria 4103
176 Ga0373955_0012847 3300035172 Bacteria 4036
177 Ga0373955_0039755 3300035172 Unclassified 2512
178 Ga0373961_0010159 3300035241 Bacteria 2316
179 Ga0373931_0007676 3300035691 Bacteria 5091
180 Ga0373931_0017833 3300035691 Bacteria 3518
181 Ga0373931_0020549 3300035691 Bacteria 3305
182 Ga0373935_0044185 3300035692 Bacteria 2807
183 Ga0373935_0089574 3300035692 Bacteria 2012
184 Ga0373935_0090499 3300035692 Bacteria 2002
185 Ga0373927_0071519 3300035695 Bacteria 2245
186 Ga0373927_0118116 3300035695 Bacteria 1730
187 Ga0373933_0000795 3300035724 Bacteria 19266
188 Ga0373933_0020251 3300035724 Unclassified 3769
189 Ga0373933_0050196 3300035724 Bacteria 2489
190 Ga0373947_0019045 3300035725 Bacteria 3956
191 Ga0373947_0026894 3300035725 Bacteria 3365
192 Ga0373947_0045031 3300035725 Bacteria 2640
193 Ga0373947_0058353 3300035725 Bacteria 2338
194 Ga0373947_0097254 3300035725 Bacteria 1845
195 Ga0373937_0025120 3300036401 Bacteria 5379
196 Ga0373937_0043405 3300036401 Bacteria 4104
197 Ga0373937_0046860 3300036401 Bacteria 3954
198 Ga0373937_0058302 3300036401 Bacteria 3547
199 Ga0373937_0076538 3300036401 Plasmid 3090
200 Ga0373937_0077473 3300036401 Bacteria 3072
201 Ga0373937_0115877 3300036401 Bacteria 2495
202 Ga0373937_0209709 3300036401 Bacteria 1833
203 Ga0373925_0031334 3300037068 Bacteria 3907
204 Ga0373925_0037021 3300037068 Bacteria 3600
205 Ga0373925_0050585 3300037068 Bacteria 3100
206 Ga0373925_0078551 3300037068 Bacteria 2506
207 Ga0395899_0022753 3300037312 Bacteria 4749
208 Ga0395900_0014583 3300037418 Bacteria 8017
209 Ga0395900_0020633 3300037418 Bacteria 6732
210 Ga0395898_0027199 3300037466 Bacteria 5745
211 Ga0436364_1093922 3300037853 Bacteria 4344
212 Ga0436364_1176668 3300037853 Bacteria 8274
213 Ga0436364_1433433 3300037853 Bacteria 15396
214 Ga0395901_0011582 3300038443 Bacteria 8936
215 Ga0395901_0020570 3300038443 Bacteria 6753
216 Ga0436365_0055822 3300039437 Bacteria 3069
217 Ga0436365_0239176 3300039437 Bacteria 7831
218 Ga0436365_0370262 3300039437 Bacteria 2102
219 Ga0436360_0668055 3300039438 Bacteria 2408
220 Ga0436360_1010729 3300039438 Bacteria 2408
221 Ga0436361_0966612 3300039447 Bacteria 2304
222 Ga0436362_0392420 3300039453 Bacteria 2309
223 Ga0436362_0731123 3300039453 Bacteria 3657
224 Ga0436362_1277450 3300039453 Bacteria 3518
225 Ga0439465_0015753 3300041413 Bacteria 2358
226 Ga0466957_0120013 3300044842 Bacteria 1675
227 Ga0495592_0083327 3300046454 Bacteria 2309
228 Ga0495629_0040633 3300046459 Bacteria 3272
229 Ga0495629_0090962 3300046459 Bacteria 2129
230 Ga0495629_0104105 3300046459 Bacteria 1980
231 Ga0495651_0004011 3300046462 Bacteria 11254
232 Ga0495653_0089795 3300046463 Bacteria 2250
233 Ga0495580_0025303 3300046472 Bacteria 4338
234 Ga0495580_0084765 3300046472 Bacteria 2207
235 Ga0495582_0009966 3300046473 Bacteria 5232
236 Ga0495639_0028916 3300046475 Bacteria 2457
237 Ga0495662_0005636 3300046476 Bacteria 6264
238 Ga0495662_0017101 3300046476 Bacteria 3511
239 Ga0495664_0026555 3300046477 Bacteria 3372
240 Ga0495608_0055133 3300046511 Bacteria 2627
241 Ga0495618_0028662 3300046514 Bacteria 3471
242 Ga0495618_0094629 3300046514 Bacteria 1910
243 Ga0495628_0087793 3300046516 Bacteria 2411
244 Ga0495628_0137779 3300046516 Bacteria 1864
245 Ga0495652_0027432 3300046529 Bacteria 5018
246 Ga0495652_0070607 3300046529 Unclassified 2918
247 Ga0495587_0006559 3300046536 Bacteria 7576
248 Ga0495587_0068078 3300046536 Bacteria 2074
249 Ga0495645_0000487 3300046543 Bacteria 27501
250 Ga0495645_0039622 3300046543 Bacteria 3436
251 Ga0495645_0048346 3300046543 Bacteria 3099
252 Ga0495667_0018424 3300046559 Bacteria 4715
253 Ga0495667_0027044 3300046559 Bacteria 3866
254 Ga0495667_0077655 3300046559 Bacteria 2159
255 Ga0495667_0094445 3300046559 Unclassified 1936
256 Ga0495634_0024702 3300046642 Bacteria 4212
257 Ga0495635_0066149 3300046663 Bacteria 2479
258 Ga0495635_0085508 3300046663 Bacteria 2158
259 Ga0495635_0088435 3300046663 Unclassified 2120
260 Ga0495599_0009687 3300046678 Bacteria 5895
261 Ga0495599_0053579 3300046678 Unclassified 2527
262 Ga0495599_0075586 3300046678 Bacteria 2103
263 Ga0495623_0031574 3300046679 Bacteria 3405
264 Ga0495623_0037524 3300046679 Bacteria 3100
265 Ga0495646_0030033 3300046680 Bacteria 3395
266 Ga0495658_0010395 3300046683 Bacteria 4656
267 Ga0495624_0016477 3300046690 Bacteria 4974
268 Ga0495600_0034498 3300046809 Unclassified 3285
269 Ga0495600_0036128 3300046809 Bacteria 3210
270 Ga0495581_0013096 3300047315 Bacteria 4808
271 Ga0495604_0055784 3300047317 Bacteria 3044
272 Ga0495674_0059199 3300047319 Bacteria 3346
273 Ga0495676_0070759 3300047321 Bacteria 2684
274 Ga0495680_0010751 3300047322 Bacteria 8155
275 Ga0495680_0121140 3300047322 Unclassified 1931
276 Ga0495680_0131489 3300047322 Bacteria 1839
277 Ga0495675_0030108 3300047444 Unclassified 3464
278 Ga0495684_0071965 3300047471 Unclassified 2627
279 Ga0495593_0031668 3300047673 Bacteria 2887
280 Ga0495602_0005359 3300048088 Bacteria 13461
281 Ga0496104_0001530 3300048907 Bacteria 19946
282 Ga0496104_0011564 3300048907 Bacteria 7908
283 Ga0496105_0175339 3300048908 Unclassified 1756
284 Ga0496107_0045416 3300048910 Bacteria 3160
285 Ga0496110_0025642 3300048913 Bacteria 5041
286 Ga0496111_0006121 3300048914 Bacteria 7781
287 Ga0496113_0040209 3300048916 Bacteria 3445
288 Ga0496115_0024104 3300048918 Bacteria 4727
289 Ga0501034_0005351 3300049571 Bacteria 14054
290 Ga0501034_0161837 3300049571 Bacteria 2208
291 nmdc:mga03683_21068_c1 3300050489 Bacteria 2508
292 nmdc:mga0k408_3819_c1 3300050493 Bacteria 7986
293 nmdc:mga05p37_177754_c1 3300050507 Bacteria 2592
294 nmdc:mga05p37_3263_c1 3300050507 Bacteria 18899
295 nmdc:mga05p37_66507_c1 3300050507 Unclassified 4434
296 nmdc:mga05p37_75942_c1 3300050507 Bacteria 4137
297 nmdc:mga09592_18463_c1 3300050508 Bacteria 5719
298 nmdc:mga09592_4872_c1 3300050508 Bacteria 10871
299 nmdc:mga09592_51911_c1 3300050508 Unclassified 3459
300 nmdc:mga09592_7979_c1 3300050508 Bacteria 8604
301 nmdc:mga0qj67_83470_c1 3300050509 Bacteria 2561
302 nmdc:mga06r32_15168_c1 3300050510 Bacteria 6998
303 nmdc:mga06r32_4910_c1 3300050510 Bacteria 12044
304 nmdc:mga06r32_91722_c1 3300050510 Bacteria 2969
305 nmdc:mga08y16_11218_c1 3300050511 Bacteria 9414
306 nmdc:mga08y16_50295_c1 3300050511 Bacteria 4362
307 nmdc:mga08y16_6921_c1 3300050511 Bacteria 11889
308 nmdc:mga0n895_1601_c2 3300050512 Bacteria 11933
309 nmdc:mga0n895_45006_c1 3300050512 Bacteria 4305
310 nmdc:mga0n895_91877_c1 3300050512 Bacteria 3038
311 nmdc:mga0rr50_10080_c1 3300050513 Bacteria 5979
312 nmdc:mga0rr50_12529_c1 3300050513 Bacteria 5486
313 nmdc:mga0a205_48198_c1 3300050515 Bacteria 4112
314 nmdc:mga0a205_52268_c1 3300050515 Bacteria 3943
315 nmdc:mga0a205_8795_c1 3300050515 Bacteria 3447
316 nmdc:mga0sz30_1053_c1 3300050516 Bacteria 9941
317 Ga0495601_0042901 3300053077 Bacteria 2840
318 Ga0495612_0004109 3300053078 Bacteria 6030
319 Ga0495612_0012804 3300053078 Bacteria 3381
320 Ga0495595_0027419 3300053084 Plasmid 2538
321 Ga0495619_0008821 3300053085 Bacteria 6377
322 Ga0495619_0063138 3300053085 Bacteria 2467
323 Ga0495619_0077849 3300053085 Bacteria 2228
324 Ga0500641_0004638 3300053096 Bacteria 4857
325 Ga0500616_0006230 3300053153 Bacteria 7871
326 Ga0530510_0018239 3300061734 Bacteria 4976
327 Ga0099796_10000632
328 JGI25405J52794_10001292
329 Ga0058859_11769712
330 Ga0065707_10010394
331 Ga0070683_100007545
332 Ga0070709_10027768
333 Ga0070709_10082806
334 Ga0070714_100007326
335 Ga0070714_100030046
336 Ga0070714_100107966
337 Ga0070714_100140701
338 Ga0070714_100184845
339 Ga0070713_100051612
340 Ga0070713_100062266
341 Ga0070713_100063170
342 Ga0070713_100095969
343 Ga0070713_100156768
344 Ga0070710_10011632
345 Ga0070710_10057424
346 Ga0070710_10059788
347 Ga0070711_100028817
348 Ga0070711_100054547
349 Ga0070711_100077677
350 Ga0070711_100097763
351 Ga0070694_100025179
352 Ga0070678_100052069
353 Ga0070681_10040584
354 Ga0070681_10156785
355 Ga0070706_100097663
356 Ga0070706_100138934
357 Ga0070707_100005875
358 Ga0070698_100054563
359 Ga0070698_100111581
360 Ga0070699_100006938
361 Ga0070699_100095900
362 Ga0070699_100127930
363 Ga0070684_100025950
364 Ga0070695_100006725
365 Ga0070665_100075905
366 Ga0068855_100095226
367 Ga0070664_100014771
368 Ga0068857_100139017
369 Ga0068856_100012604
370 Ga0068856_100102411
371 Ga0068852_100017454
372 Ga0068864_100100775
373 Ga0081455_10000394
374 Ga0081455_10000637
375 Ga0081455_10001009
376 Ga0081455_10002079
377 Ga0081455_10006242
378 Ga0081455_10020078
379 Ga0081455_10088194
380 Ga0081538_10005150
381 Ga0081538_10020000
382 Ga0081538_10045909
383 Ga0081538_10051123
384 Ga0081540_1004858
385 Ga0081540_1005378
386 Ga0081540_1024024
387 Ga0081540_1042959
388 Ga0081539_10002595
389 Ga0081539_10005906
390 Ga0081539_10005926
391 Ga0070717_10011154
392 Ga0070717_10062005
393 Ga0070717_10125954
394 Ga0070712_100014672
395 Ga0070712_100024521
396 Ga0070712_100029824
397 Ga0070712_100031671
398 Ga0070712_100036701
399 Ga0075362_10004184
400 Ga0075367_10024408
401 Ga0075369_10002840
402 Ga0075369_10019758
403 Ga0075370_10065030
404 Ga0075428_100004118
405 Ga0075428_100024851
406 Ga0075428_100025104
407 Ga0075428_100040390
408 Ga0075428_100127371
409 Ga0075430_100019813
410 Ga0075431_100006552
411 Ga0075431_100019530
412 Ga0075431_100026772
413 Ga0075433_10075503
414 Ga0075433_10151278
415 Ga0075434_100007813
416 Ga0075434_100039290
417 Ga0075434_100047187
418 Ga0075429_100006387
419 Ga0075429_100018193
420 Ga0075429_100046681
421 Ga0075429_100063556
422 Ga0075429_100113210
423 Ga0075436_100025882
424 Ga0075436_100027555
425 Ga0075435_100011355
426 Ga0075435_100077297
427 Ga0099794_10006253
428 Ga0099795_10000611
429 Ga0099795_10009010
430 Ga0105240_10096125
431 Ga0111539_10012796
432 Ga0111539_10028692
433 Ga0114129_10068063
434 Ga0114129_10093211
435 Ga0114129_10228117
436 Ga0105242_10070033
437 Ga0105238_10063677
438 Ga0105249_10091108
439 Ga0099796_10000964
440 Ga0099796_10011202
441 Ga0157373_10038353
442 Ga0163162_10290258
443 Ga0157375_10045621
444 Ga0163163_10012662
445 Ga0182008_10037341
446 Ga0157379_10077157
447 Ga0213873_10011103
448 Ga0213875_10001505
449 Ga0213875_10007218
450 Ga0207426_1006630
451 Ga0207647_10030431
452 Ga0207684_10033746
453 Ga0207707_10050014
454 Ga0207695_10115383
455 Ga0207693_10007294
456 Ga0207693_10034656
457 Ga0207693_10042077
458 Ga0207693_10052593
459 Ga0207693_10062168
460 Ga0207693_10076226
461 Ga0207693_10091663
462 Ga0207663_10012604
463 Ga0207663_10019385
464 Ga0207663_10091099
465 Ga0207646_10009171
466 Ga0207646_10088526
467 Ga0207694_10072936
468 Ga0207659_10028633
469 Ga0207700_10022655
470 Ga0207700_10055709
471 Ga0207700_10070272
472 Ga0207700_10079745
473 Ga0207700_10083063
474 Ga0207664_10010390
475 Ga0207664_10058141
476 Ga0207664_10058854
477 Ga0207664_10139541
478 Ga0207644_10023409
479 Ga0207644_10058707
480 Ga0207670_10024493
481 Ga0207665_10086121
482 Ga0207665_10113171
483 Ga0207661_10018646
484 Ga0207679_10015053
485 Ga0207667_10031057
486 Ga0207703_10114410
487 Ga0207674_10080456
488 Ga0268264_10023580
489 Ga0265337_1011816
490 Ga0373923_0001063
491 Ga0373923_0003453
492 Ga0373923_0038280
493 Ga0373936_0003137
494 Ga0373936_0035813
495 Ga0373941_0009862
496 Ga0373953_0011861
497 Ga0373956_0058395
498 Ga0373957_0012871
499 Ga0373957_0038876
500 Ga0373943_0065801
501 Ga0373946_0007032
502 Ga0373955_0012847
503 Ga0373955_0039755
504 Ga0373961_0010159
505 Ga0373931_0007676
506 Ga0373931_0017833
507 Ga0373931_0020549
508 Ga0373935_0044185
509 Ga0373935_0089574
510 Ga0373935_0090499
511 Ga0373927_0071519
512 Ga0373927_0118116
513 Ga0373933_0000795
514 Ga0373933_0020251
515 Ga0373933_0050196
516 Ga0373947_0019045
517 Ga0373947_0026894
518 Ga0373947_0045031
519 Ga0373947_0058353
520 Ga0373947_0097254
521 Ga0373937_0025120
522 Ga0373937_0043405
523 Ga0373937_0046860
524 Ga0373937_0058302
525 Ga0373937_0076538
526 Ga0373937_0077473
527 Ga0373937_0115877
528 Ga0373937_0209709
529 Ga0373925_0031334
530 Ga0373925_0037021
531 Ga0373925_0050585
532 Ga0373925_0078551
533 Ga0395899_0022753
534 Ga0395900_0014583
535 Ga0395900_0020633
536 Ga0395898_0027199
537 Ga0436364_1093922
538 Ga0436364_1176668
539 Ga0436364_1433433
540 Ga0395901_0011582
541 Ga0395901_0020570
542 Ga0436365_0055822
543 Ga0436365_0239176
544 Ga0436365_0370262
545 Ga0436360_0668055
546 Ga0436360_1010729
547 Ga0436361_0966612
548 Ga0436362_0392420
549 Ga0436362_0731123
550 Ga0436362_1277450
551 Ga0439465_0015753
552 Ga0466957_0120013
553 Ga0495592_0083327
554 Ga0495629_0040633
555 Ga0495629_0090962
556 Ga0495629_0104105
557 Ga0495651_0004011
558 Ga0495653_0089795
559 Ga0495580_0025303
560 Ga0495580_0084765
561 Ga0495582_0009966
562 Ga0495639_0028916
563 Ga0495662_0005636
564 Ga0495662_0017101
565 Ga0495664_0026555
566 Ga0495608_0055133
567 Ga0495618_0028662
568 Ga0495618_0094629
569 Ga0495628_0087793
570 Ga0495628_0137779
571 Ga0495652_0027432
572 Ga0495652_0070607
573 Ga0495587_0006559
574 Ga0495587_0068078
575 Ga0495645_0000487
576 Ga0495645_0039622
577 Ga0495645_0048346
578 Ga0495667_0018424
579 Ga0495667_0027044
580 Ga0495667_0077655
581 Ga0495667_0094445
582 Ga0495634_0024702
583 Ga0495635_0066149
584 Ga0495635_0085508
585 Ga0495635_0088435
586 Ga0495599_0009687
587 Ga0495599_0053579
588 Ga0495599_0075586
589 Ga0495623_0031574
590 Ga0495623_0037524
591 Ga0495646_0030033
592 Ga0495658_0010395
593 Ga0495624_0016477
594 Ga0495600_0034498
595 Ga0495600_0036128
596 Ga0495581_0013096
597 Ga0495604_0055784
598 Ga0495674_0059199
599 Ga0495676_0070759
600 Ga0495680_0010751
601 Ga0495680_0121140
602 Ga0495680_0131489
603 Ga0495675_0030108
604 Ga0495684_0071965
605 Ga0495593_0031668
606 Ga0495602_0005359
607 Ga0496104_0001530
608 Ga0496104_0011564
609 Ga0496105_0175339
610 Ga0496107_0045416
611 Ga0496110_0025642
612 Ga0496111_0006121
613 Ga0496113_0040209
614 Ga0496115_0024104
615 Ga0501034_0005351
616 Ga0501034_0161837
617 nmdc:mga03683_21068_c1
618 nmdc:mga0k408_3819_c1
619 nmdc:mga05p37_177754_c1
620 nmdc:mga05p37_3263_c1
621 nmdc:mga05p37_66507_c1
622 nmdc:mga05p37_75942_c1
623 nmdc:mga09592_18463_c1
624 nmdc:mga09592_4872_c1
625 nmdc:mga09592_51911_c1
626 nmdc:mga09592_7979_c1
627 nmdc:mga0qj67_83470_c1
628 nmdc:mga06r32_15168_c1
629 nmdc:mga06r32_4910_c1
630 nmdc:mga06r32_91722_c1
631 nmdc:mga08y16_11218_c1
632 nmdc:mga08y16_50295_c1
633 nmdc:mga08y16_6921_c1
634 nmdc:mga0n895_1601_c2
635 nmdc:mga0n895_45006_c1
636 nmdc:mga0n895_91877_c1
637 nmdc:mga0rr50_10080_c1
638 nmdc:mga0rr50_12529_c1
639 nmdc:mga0a205_48198_c1
640 nmdc:mga0a205_52268_c1
641 nmdc:mga0a205_8795_c1
642 nmdc:mga0sz30_1053_c1
643 Ga0495601_0042901
644 Ga0495612_0004109
645 Ga0495612_0012804
646 Ga0495595_0027419
647 Ga0495619_0008821
648 Ga0495619_0063138
649 Ga0495619_0077849
650 Ga0500641_0004638
651 Ga0500616_0006230
652 Ga0530510_0018239

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00496

SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

168

542

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hlx-assembly1.cif.gz_A structure of the pbp agaa in complex with agropinic acid from a.tumefacien r10 0.8864 61 560
6hlx-assembly1.cif.gz_A structure of the pbp agaa in complex with agropinic acid from a.tumefacien r10 0.8763 61 560
1b52-assembly1.cif.gz_A oligo-peptide binding protein (oppa) complexed with ktk 0.8519 54 558
6tfs-assembly2.cif.gz_B structure in p3212 form of the pbp/sbp moaa in complex with glucopinic acid from a.tumefacien r10 0.8503 58 560
6tfs-assembly2.cif.gz_B structure in p3212 form of the pbp/sbp moaa in complex with glucopinic acid from a.tumefacien r10 0.8471 58 560
ID Description Score Start End Superfamily
1uqwB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9038 228 301 3.40.190.10
af_Q46863_291_502_3.10.105.10 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.9003 311 524 3.10.105.10
6hlxA02 Alpha Beta;Alpha-Beta Complex;Dipeptide-binding Protein; domain 1;Dipeptide-binding Protein; Domain 1 0.9001 71 225 3.90.76.10
4tozB03 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.8983 310 523 3.10.105.10
af_P75797_27_224_3.10.105.10 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.8982 62 265 3.10.105.10
ID Description Score Start End GO Terms
AF-A0A644XBN1-F1-model_v4 Periplasmic dipeptide transport protein 0.9133 97 560 GO:0015031
GO:0015833
GO:0030313
GO:0042597
GO:0043190
GO:1904680
AF-A0A644XBN1-F1-model_v4 Periplasmic dipeptide transport protein 0.9093 97 560 GO:0015031
GO:0015833
GO:0030313
GO:0042597
GO:0043190
GO:1904680
AF-A0A2H5ZSK1-F1-model_v4 Glutathione-binding protein GsiB 0.9069 97 560 GO:0015833
GO:0042597
GO:0043190
GO:1904680
AF-A0A521Y520-F1-model_v4 ABC transporter substrate-binding protein 0.9043 193 560 GO:0015833
GO:1904680
AF-A0A2H5ZSK1-F1-model_v4 Glutathione-binding protein GsiB 0.9032 97 560 GO:0015833
GO:0042597
GO:0043190
GO:1904680

Map