F416558

General Info

Members Datasets Scaffolds Average Seq Length
345 232 690 375

Family's Representative Sequence

Representative Sequence 3300049742|Ga0501080_0000480|Ga0501080_0000480_18035_19252
Length 405
Sequence LSRQLHHWQVSACALRALSDIDKDMPGDLNLSLALSTLLFEWRRYMAAIVALASAGVLVLGMSGLFVGLISGYTATIDRSRADIMVLPPNAKSLNNSGGMPARILPLVYMNPSVTEVRDLDGDGGRFYGPGRHDPEYVQASVVDPIPGAVTLPVDFSEQVREALSVPYNIAVDKTALKKLGIELGSEATFNGHVVRVAAILQNYPNFDSPNIIMSRQTLREMGRANTTRIGPLLVRTRTNDPKQVQAVVDQLNAVADGQYRAWTRPALRAATLDDFLNQSIIALFMWAATVLGLLVGIMITWQTLRGAILANIKELASLRALGVSMGSLRLIVMELSFWVGIAGLFFTAGLILLIWFLASLGGVPFGFMMSWIITCAIMLMIIALASGFFSLGVLKKSQPADLLR

Samples

Sample ID Description Type Environment
1 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
8 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
12 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
13 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
54 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
55 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
56 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
95 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
99 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
102 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
105 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
114 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
115 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
116 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
119 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
122 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
123 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
124 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
125 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
126 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
130 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
131 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
132 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
133 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
134 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
138 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
139 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
140 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
141 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
142 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
149 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
150 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
151 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
152 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
153 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
154 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
155 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
156 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
157 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
165 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
166 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
169 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
174 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
177 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
178 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
179 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
180 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
181 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
182 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
183 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
184 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
185 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
186 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
187 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
188 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
189 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
190 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
191 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
192 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
193 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
194 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
195 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
196 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
197 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
198 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
199 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
200 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
201 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
202 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
203 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
204 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
205 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
206 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
207 2643221583 Caulobacter sp. Root655 Isolate Unclassified
208 2643221584 Caulobacter sp. Root656 Isolate Unclassified
209 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
210 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
211 2643221640 Caulobacter sp. Root342 Isolate Unclassified
212 2643221642 Caulobacter sp. Root343 Isolate Unclassified
213 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
214 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
215 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
216 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
217 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
218 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
219 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
220 2818991435 Caulobacter henricii 536 Isolate Unclassified
221 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
222 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
223 2849560528 Caulobacter zeae 410 Isolate Unclassified
224 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
225 2851153111 Caulobacter radicis 736 Isolate Unclassified
226 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
227 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
228 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
229 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
230 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
231 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
232 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.28
Metatranscriptomes 0.87
Isolates 9.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.16
Nodule 0
Rhizoplane 2.61
Rhizosphere 62.32
Stem 0
Stem Tuber 0
Unclassified 1.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501080_0000480 3300049742 Bacteria 31084
2 JGI25153J46596_10028214 3300003215 Bacteria 1952
3 rootH2_10043994 3300003320 Bacteria 2395
4 rootH2_10142961 3300003320 Bacteria 1457
5 rootL2_10007345 3300003322 Bacteria 5065
6 rootL2_10201520 3300003322 Bacteria 1786
7 rootL2_10253773 3300003322 Bacteria 3607
8 rootH1_10006765 3300003323 Bacteria 6413
9 Ga0006562J51391_1089216 3300003578 Bacteria 5680
10 Ga0055537_1001515 3300003773 Bacteria 8931
11 Ga0055524_1017223 3300003775 Bacteria 2556
12 Ga0055536_1000762 3300003781 Bacteria 21444
13 Ga0055528_1004179 3300003790 Bacteria 7021
14 Ga0055530_10000091 3300003791 Bacteria 78039
15 Ga0055531_10002841 3300003794 Bacteria 11336
16 Ga0055531_10005702 3300003794 Bacteria 7222
17 Ga0055531_10015538 3300003794 Bacteria 3347
18 Ga0065165_1000784 3300005262 Bacteria 42627
19 Ga0070658_10070030 3300005327 Bacteria 2870
20 Ga0070670_100015393 3300005331 Bacteria 6569
21 Ga0070660_100011308 3300005339 Bacteria 6334
22 Ga0070691_10020181 3300005341 Bacteria 3078
23 Ga0070668_100001380 3300005347 Bacteria 17432
24 Ga0070668_100011823 3300005347 Bacteria 6501
25 Ga0070659_100000056 3300005366 Bacteria 88478
26 Ga0070662_100082194 3300005457 Bacteria 2402
27 Ga0070681_10139360 3300005458 Bacteria 2355
28 Ga0070679_100039093 3300005530 Bacteria 4715
29 Ga0068853_100052190 3300005539 Bacteria 3522
30 Ga0068853_100089965 3300005539 Bacteria 2697
31 Ga0070696_100107471 3300005546 Bacteria 2007
32 Ga0070665_100000015 3300005548 Bacteria 462744
33 Ga0068855_100491653 3300005563 Bacteria 1334
34 Ga0068852_100033929 3300005616 Bacteria 4243
35 Ga0068859_100047982 3300005617 Bacteria 4291
36 Ga0068864_100022755 3300005618 Bacteria 5256
37 Ga0068861_100059991 3300005719 Bacteria 2914
38 Ga0068863_100057294 3300005841 Bacteria 3688
39 Ga0068863_100063427 3300005841 Bacteria 3495
40 Ga0068860_100000158 3300005843 Bacteria 110478
41 Ga0068860_100026569 3300005843 Bacteria 5579
42 Ga0068860_100056741 3300005843 Bacteria 3722
43 Ga0068862_100012464 3300005844 Bacteria 7036
44 Ga0068862_100012471 3300005844 Bacteria 7034
45 Ga0075363_100041472 3300006048 Bacteria 2428
46 Ga0075366_10009370 3300006195 Bacteria 5464
47 Ga0075366_10068354 3300006195 Bacteria 2114
48 Ga0075370_10031294 3300006353 Bacteria 2970
49 Ga0075370_10068377 3300006353 Bacteria 2029
50 Ga0068865_100000734 3300006881 Bacteria 18420
51 Ga0097620_100047982 3300006931 Bacteria 4291
52 Ga0099795_10000023 3300007788 Bacteria 52134
53 Ga0099795_10001889 3300007788 Bacteria 4751
54 Ga0105240_10053781 3300009093 Bacteria 5051
55 Ga0105240_10064660 3300009093 Bacteria 4545
56 Ga0111539_10001718 3300009094 Bacteria 29157
57 Ga0105241_10178270 3300009174 Bacteria 1761
58 Ga0105242_10036920 3300009176 Bacteria 3922
59 Ga0105242_10143694 3300009176 Bacteria 2073
60 Ga0105248_10001174 3300009177 Bacteria 29276
61 Ga0105238_10029113 3300009551 Bacteria 5627
62 Ga0105238_10165233 3300009551 Bacteria 2189
63 Ga0105238_10293604 3300009551 Bacteria 1608
64 Ga0105249_10295614 3300009553 Bacteria 1622
65 Ga0099796_10000018 3300010159 Bacteria 44676
66 Ga0099796_10032458 3300010159 Bacteria 1711
67 Ga0105239_10116709 3300010375 Bacteria 2962
68 Ga0105239_10133415 3300010375 Bacteria 2763
69 Ga0157371_10025336 3300013102 Bacteria 4324
70 Ga0157370_10032839 3300013104 Bacteria 5066
71 Ga0157370_10080434 3300013104 Bacteria 3068
72 Ga0157370_10084099 3300013104 Bacteria 2991
73 Ga0163162_10120604 3300013306 Bacteria 2726
74 Ga0163163_10144023 3300014325 Bacteria 2426
75 Ga0183365_10001 3300015684 Bacteria 2090444
76 Ga0213872_10005603 3300021361 Bacteria 6414
77 Ga0209026_1001123 3300025250 Bacteria 12660
78 Ga0209565_1000549 3300025263 Bacteria 26149
79 Ga0209673_1002030 3300025273 Bacteria 15409
80 Ga0209676_1000038 3300025292 Bacteria 449305
81 Ga0209676_1000099 3300025292 Bacteria 230048
82 Ga0209676_1000150 3300025292 Bacteria 167474
83 Ga0209676_1002748 3300025292 Bacteria 11789
84 Ga0209564_1000892 3300025295 Bacteria 39200
85 Ga0209564_1014442 3300025295 Bacteria 3285
86 Ga0209758_1001070 3300025297 Bacteria 35640
87 Ga0209758_1002860 3300025297 Bacteria 16761
88 Ga0209758_1007052 3300025297 Bacteria 7798
89 Ga0209050_1000029 3300025298 Bacteria 465801
90 Ga0209256_1001868 3300025299 Bacteria 19446
91 Ga0209256_1004775 3300025299 Bacteria 8251
92 Ga0209051_1006528 3300025303 Bacteria 6552
93 Ga0209257_1000066 3300025304 Bacteria 344166
94 Ga0209257_1000271 3300025304 Bacteria 118632
95 Ga0209257_1000306 3300025304 Bacteria 105616
96 Ga0209257_1001124 3300025304 Bacteria 34483
97 Ga0209257_1009168 3300025304 Bacteria 5381
98 Ga0207705_10003684 3300025909 Bacteria 11657
99 Ga0207654_10083001 3300025911 Bacteria 1934
100 Ga0207707_10012874 3300025912 Bacteria 7280
101 Ga0207695_10001525 3300025913 Bacteria 38311
102 Ga0207695_10001672 3300025913 Bacteria 35718
103 Ga0207695_10083278 3300025913 Bacteria 3231
104 Ga0207660_10038602 3300025917 Bacteria 3334
105 Ga0207657_10010016 3300025919 Bacteria 9481
106 Ga0207657_10104905 3300025919 Bacteria 2341
107 Ga0207652_10010693 3300025921 Bacteria 7390
108 Ga0207652_10231642 3300025921 Bacteria 1665
109 Ga0207694_10017352 3300025924 Bacteria 5443
110 Ga0207694_10140848 3300025924 Bacteria 1939
111 Ga0207694_10183114 3300025924 Bacteria 1699
112 Ga0207650_10053387 3300025925 Bacteria 2995
113 Ga0207690_10000104 3300025932 Bacteria 68527
114 Ga0207706_10049739 3300025933 Bacteria 3704
115 Ga0207686_10244856 3300025934 Unclassified 1307
116 Ga0207704_10000804 3300025938 Bacteria 13886
117 Ga0207711_10000552 3300025941 Bacteria 38214
118 Ga0207711_10052457 3300025941 Bacteria 3495
119 Ga0207679_10185002 3300025945 Bacteria 1726
120 Ga0207667_10022631 3300025949 Bacteria 6935
121 Ga0207667_10525682 3300025949 Bacteria 1198
122 Ga0207668_10020491 3300025972 Bacteria 4202
123 Ga0207668_10044043 3300025972 Bacteria 3033
124 Ga0207658_10030662 3300025986 Bacteria 3810
125 Ga0207639_10013720 3300026041 Bacteria 5681
126 Ga0207702_10273798 3300026078 Bacteria 1593
127 Ga0207641_10047603 3300026088 Bacteria 3616
128 Ga0207676_10017329 3300026095 Bacteria 5221
129 Ga0207675_100086076 3300026118 Bacteria 2951
130 Ga0207698_10017831 3300026142 Bacteria 4825
131 Ga0209179_1000095 3300027512 Bacteria 12527
132 Ga0207428_10007185 3300027907 Bacteria 10184
133 Ga0265354_1001807 3300028016 Unclassified 2904
134 Ga0268266_10000005 3300028379 Bacteria 1448194
135 Ga0268266_10173710 3300028379 Bacteria 1957
136 Ga0268264_10000029 3300028381 Bacteria 419246
137 Ga0268264_10009980 3300028381 Bacteria 7863
138 Ga0268264_10349906 3300028381 Bacteria 1406
139 Ga0265326_10006638 3300028558 Bacteria 3579
140 Ga0307517_10004846 3300028786 Bacteria 20520
141 Ga0307517_10107179 3300028786 Bacteria 2155
142 Ga0307515_10052954 3300028794 Bacteria 6003
143 Ga0307515_10169788 3300028794 Bacteria 2180
144 Ga0265338_10009404 3300028800 Bacteria 11662
145 Ga0307511_10002785 3300030521 Bacteria 18154
146 Ga0265770_1001908 3300030878 Unclassified 2843
147 Ga0265760_10040578 3300031090 Bacteria 1387
148 Ga0265327_10000550 3300031251 Bacteria 64087
149 Ga0265327_10001692 3300031251 Bacteria 26350
150 Ga0265327_10023248 3300031251 Bacteria 3676
151 Ga0307513_10010039 3300031456 Bacteria 11933
152 Ga0307513_10016728 3300031456 Bacteria 8826
153 Ga0265314_10146843 3300031711 Bacteria 1451
154 Ga0307413_10050414 3300031824 Bacteria 2501
155 Ga0307406_10001625 3300031901 Bacteria 12364
156 Ga0307412_10024099 3300031911 Bacteria 3753
157 Ga0307414_10009797 3300032004 Bacteria 5522
158 Ga0307414_10018948 3300032004 Bacteria 4253
159 Ga0307414_10025711 3300032004 Bacteria 3776
160 Ga0307414_10332040 3300032004 Bacteria 1298
161 Ga0395899_0002368 3300037312 Bacteria 15354
162 Ga0395899_0113702 3300037312 Bacteria 1944
163 Ga0395900_0000006 3300037418 Bacteria 495364
164 Ga0395900_0062375 3300037418 Bacteria 3832
165 Ga0395898_0004001 3300037466 Bacteria 16217
166 Ga0395905_0000070 3300037471 Bacteria 175662
167 Ga0395905_0003274 3300037471 Bacteria 17404
168 Ga0395905_0268108 3300037471 Bacteria 1593
169 Ga0395905_0321148 3300037471 Bacteria 1438
170 Ga0395901_0000001 3300038443 Bacteria 800383
171 Ga0395901_0016778 3300038443 Bacteria 7462
172 Ga0436361_0400469 3300039447 Bacteria 1588
173 Ga0436361_0427388 3300039447 Bacteria 4540
174 Ga0439465_0016043 3300041413 Bacteria 2336
175 Ga0439442_008202 3300042002 Bacteria 2109
176 Ga0439446_0015441 3300042156 Bacteria 2118
177 Ga0466966_0000979 3300044684 Bacteria 18323
178 Ga0466961_0010192 3300044693 Bacteria 5987
179 Ga0466971_0064921 3300044719 Bacteria 1652
180 Ga0466959_0000108 3300045049 Bacteria 53075
181 Ga0466959_0027498 3300045049 Bacteria 4219
182 Ga0466958_0041171 3300045836 Bacteria 2778
183 Ga0495590_0003428 3300046457 Bacteria 6475
184 Ga0495638_0000130 3300046460 Bacteria 121416
185 Ga0495638_0000317 3300046460 Bacteria 62243
186 Ga0495638_0002616 3300046460 Bacteria 14490
187 Ga0495638_0013692 3300046460 Bacteria 5510
188 Ga0495650_0000020 3300046471 Bacteria 533839
189 Ga0495607_0053217 3300046501 Bacteria 2341
190 Ga0495583_0000001 3300046506 Bacteria 811973
191 Ga0495606_0005604 3300046507 Bacteria 11939
192 Ga0495606_0089823 3300046507 Bacteria 1892
193 Ga0495610_0001532 3300046512 Bacteria 20368
194 Ga0495610_0002540 3300046512 Bacteria 15212
195 Ga0495610_0002881 3300046512 Bacteria 13934
196 Ga0495616_0000461 3300046513 Bacteria 30938
197 Ga0495616_0050179 3300046513 Bacteria 2088
198 Ga0495631_0000671 3300046518 Bacteria 22047
199 Ga0495632_0000761 3300046519 Bacteria 28951
200 Ga0495648_0016467 3300046524 Bacteria 5331
201 Ga0495648_0029149 3300046524 Bacteria 3667
202 Ga0495654_0000139 3300046530 Bacteria 75903
203 Ga0495633_0001784 3300046558 Bacteria 15913
204 Ga0495668_0000910 3300046616 Bacteria 33115
205 Ga0495668_0010659 3300046616 Bacteria 5554
206 Ga0495668_0012429 3300046616 Bacteria 5048
207 Ga0495668_0013589 3300046616 Bacteria 4796
208 Ga0495625_0000283 3300046660 Bacteria 79056
209 Ga0495625_0015250 3300046660 Bacteria 6094
210 Ga0495625_0044074 3300046660 Bacteria 3231
211 Ga0495625_0075113 3300046660 Bacteria 2365
212 Ga0495589_0028095 3300046794 Bacteria 2841
213 Ga0495660_0002370 3300046810 Bacteria 12050
214 Ga0495672_0001159 3300047320 Bacteria 26645
215 Ga0495679_002473 3300047446 Bacteria 9391
216 Ga0495673_0000305 3300047469 Bacteria 65300
217 Ga0495673_0000514 3300047469 Bacteria 40914
218 Ga0495681_0028295 3300047470 Bacteria 2886
219 Ga0495686_0001490 3300047472 Bacteria 25370
220 Ga0495686_0009629 3300047472 Bacteria 6939
221 Ga0495686_0017975 3300047472 Bacteria 4754
222 Ga0495686_0039796 3300047472 Bacteria 3000
223 Ga0495686_0164301 3300047472 Bacteria 1295
224 Ga0496100_0108891 3300048903 Bacteria 1922
225 Ga0496106_0142389 3300048909 Bacteria 1887
226 Ga0496107_0000929 3300048910 Bacteria 17287
227 Ga0496112_0046387 3300048915 Bacteria 4262
228 Ga0496113_0043323 3300048916 Bacteria 3330
229 Ga0496115_0000636 3300048918 Bacteria 26386
230 Ga0496115_0006124 3300048918 Bacteria 8794
231 Ga0496115_0023993 3300048918 Bacteria 4737
232 Ga0496115_0040321 3300048918 Bacteria 3712
233 Ga0496121_0004688 3300048924 Bacteria 18127
234 Ga0496122_0019263 3300048925 Bacteria 6244
235 Ga0496123_0005117 3300048926 Bacteria 13382
236 Ga0496124_0053517 3300048927 Bacteria 3420
237 Ga0496124_0054757 3300048927 Bacteria 3375
238 Ga0496124_0068588 3300048927 Bacteria 2947
239 Ga0496125_0002497 3300048928 Bacteria 23797
240 Ga0496125_0018705 3300048928 Bacteria 6569
241 Ga0496125_0087481 3300048928 Bacteria 2353
242 Ga0496126_0001433 3300048929 Bacteria 37472
243 Ga0495678_000893 3300049459 Bacteria 26490
244 Ga0501032_0003465 3300049569 Bacteria 12085
245 Ga0501033_0007659 3300049570 Bacteria 8386
246 Ga0501033_0028087 3300049570 Bacteria 4229
247 Ga0501034_0116098 3300049571 Bacteria 2665
248 Ga0501034_0116666 3300049571 Bacteria 2658
249 Ga0501036_0253668 3300049572 Bacteria 1474
250 Ga0501036_0279231 3300049572 Unclassified 1398
251 Ga0501038_0087622 3300049574 Bacteria 2614
252 Ga0501043_0170952 3300049579 Bacteria 1696
253 Ga0501043_0316649 3300049579 Bacteria 1190
254 Ga0501047_0000722 3300049581 Bacteria 34348
255 Ga0501047_0003160 3300049581 Bacteria 15617
256 Ga0501047_0016523 3300049581 Bacteria 7046
257 Ga0501047_0199509 3300049581 Bacteria 1862
258 Ga0501047_0212932 3300049581 Bacteria 1790
259 Ga0501067_0000034 3300049583 Bacteria 84068
260 Ga0501068_0002041 3300049584 Bacteria 10769
261 Ga0501072_0032617 3300049588 Bacteria 4080
262 Ga0501072_0227242 3300049588 Bacteria 1487
263 Ga0501073_0000013 3300049589 Bacteria 160591
264 Ga0501077_0000423 3300049593 Bacteria 25601
265 Ga0501257_000269 3300049686 Bacteria 10030
266 Ga0501080_0029922 3300049742 Bacteria 5069
267 Ga0501083_0035999 3300049744 Bacteria 3378
268 Ga0501083_0075172 3300049744 Bacteria 2244
269 Ga0501035_0118687 3300049822 Bacteria 2314
270 Ga0501044_0001795 3300049823 Bacteria 25075
271 Ga0501044_0008820 3300049823 Bacteria 11029
272 nmdc:mga0k408_54351_c1 3300050493 Bacteria 2320
273 nmdc:mga07m45_73027_c1 3300050496 Bacteria 1953
274 nmdc:mga08y16_1766_c1 3300050511 Bacteria 21907
275 Ga0500635_0000786 3300053080 Bacteria 7879
276 Ga0500578_0000284 3300053086 Bacteria 62622
277 Ga0500644_0000212 3300053088 Bacteria 34977
278 Ga0500644_0010178 3300053088 Bacteria 2538
279 Ga0500644_0016733 3300053088 Bacteria 2115
280 Ga0500644_0073205 3300053088 Bacteria 1240
281 Ga0500651_0101111 3300053093 Bacteria 1767
282 Ga0500641_0002197 3300053096 Bacteria 6907
283 Ga0500554_002246 3300053102 Bacteria 3769
284 Ga0500556_0000529 3300053104 Bacteria 26084
285 Ga0500562_000467 3300053108 Bacteria 9794
286 Ga0500562_000559 3300053108 Bacteria 8971
287 Ga0500594_0000027 3300053118 Bacteria 50955
288 Ga0500595_001571 3300053119 Bacteria 12071
289 Ga0500595_002342 3300053119 Bacteria 9472
290 Ga0500595_007271 3300053119 Bacteria 4599
291 Ga0500595_046408 3300053119 Bacteria 1366
292 Ga0500608_000024 3300053122 Bacteria 71478
293 Ga0500608_000179 3300053122 Bacteria 25858
294 Ga0500618_000063 3300053125 Bacteria 93515
295 Ga0500658_0002670 3300053134 Bacteria 6850
296 Ga0500559_0000024 3300053136 Bacteria 126300
297 Ga0500559_0006575 3300053136 Bacteria 5242
298 Ga0500559_0009518 3300053136 Bacteria 4199
299 Ga0500559_0095841 3300053136 Bacteria 1362
300 Ga0500564_000539 3300053138 Bacteria 11348
301 Ga0500573_0093528 3300053140 Bacteria 1696
302 Ga0500577_0003216 3300053142 Bacteria 4231
303 Ga0500616_0036066 3300053153 Bacteria 2686
304 Ga0500622_0002048 3300053156 Bacteria 15028
305 Ga0500622_0022496 3300053156 Bacteria 3342
306 Ga0500622_0038029 3300053156 Bacteria 2512
307 Ga0500627_0014601 3300053158 Bacteria 3013
308 Ga0500645_000806 3300053730 Bacteria 18783
309 Ga0500645_010203 3300053730 Bacteria 3118
310 Ga0500609_000449 3300053731 Bacteria 6125
311 Ga0501082_0028643 3300060353 Bacteria 4798
312 2511120652 2510917020 Bacteria 5657507
313 2585145962 2582581279 Bacteria 4980720
314 2585150621 2582581280 Bacteria 5994497
315 2585198139 2582581293 Bacteria 5907401
316 2587915823 2585428106 Bacteria 5179711
317 2643751049 2643221545 Bacteria 5083237
318 2643782774 2643221552 Bacteria 5708754
319 2643883941 2643221574 Bacteria 2789653
320 2643926406 2643221583 Bacteria 5218014
321 2643928083 2643221584 Bacteria 5511711
322 2643999896 2643221598 Bacteria 4578346
323 2644088326 2643221614 Bacteria 4260023
324 2644224315 2643221640 Bacteria 5258820
325 2644234749 2643221642 Bacteria 5357871
326 2644343562 2643221661 Bacteria 4267604
327 2644353177 2643221663 Bacteria 3425771
328 2644368960 2643221666 Bacteria 4265935
329 2644511017 2643221691 Bacteria 5093099
330 2644549601 2643221699 Bacteria 5731501
331 2739790348 2739367756 Bacteria 4553612
332 2792458880 2791355048 Bacteria 5832535
333 2819538739 2818991435 Bacteria 5433759
334 2819646727 2818991454 Bacteria 5563326
335 2843749036 2843744320 Bacteria 5659202
336 2849565597 2849560528 Bacteria 5393480
337 2849573968 2849573788 Bacteria 5421256
338 2851155490 2851153111 Bacteria 5542585
339 2857509263 2857504554 Bacteria 5369913
340 2884962907 2884960567 Bacteria 5437054
341 2898330913 2898329390 Bacteria 5168154
342 2928532569 2928531327 Bacteria 5101314
343 2928973732 2928972540 Bacteria 3058286
344 2941486205 2941485952 Bacteria 3591484
345 2977241305 2977240413 Bacteria 3191065
346 Ga0501080_0000480
347 JGI25153J46596_10028214
348 rootH2_10043994
349 rootH2_10142961
350 rootL2_10007345
351 rootL2_10201520
352 rootL2_10253773
353 rootH1_10006765
354 Ga0006562J51391_1089216
355 Ga0055537_1001515
356 Ga0055524_1017223
357 Ga0055536_1000762
358 Ga0055528_1004179
359 Ga0055530_10000091
360 Ga0055531_10002841
361 Ga0055531_10005702
362 Ga0055531_10015538
363 Ga0065165_1000784
364 Ga0070658_10070030
365 Ga0070670_100015393
366 Ga0070660_100011308
367 Ga0070691_10020181
368 Ga0070668_100001380
369 Ga0070668_100011823
370 Ga0070659_100000056
371 Ga0070662_100082194
372 Ga0070681_10139360
373 Ga0070679_100039093
374 Ga0068853_100052190
375 Ga0068853_100089965
376 Ga0070696_100107471
377 Ga0070665_100000015
378 Ga0068855_100491653
379 Ga0068852_100033929
380 Ga0068859_100047982
381 Ga0068864_100022755
382 Ga0068861_100059991
383 Ga0068863_100057294
384 Ga0068863_100063427
385 Ga0068860_100000158
386 Ga0068860_100026569
387 Ga0068860_100056741
388 Ga0068862_100012464
389 Ga0068862_100012471
390 Ga0075363_100041472
391 Ga0075366_10009370
392 Ga0075366_10068354
393 Ga0075370_10031294
394 Ga0075370_10068377
395 Ga0068865_100000734
396 Ga0097620_100047982
397 Ga0099795_10000023
398 Ga0099795_10001889
399 Ga0105240_10053781
400 Ga0105240_10064660
401 Ga0111539_10001718
402 Ga0105241_10178270
403 Ga0105242_10036920
404 Ga0105242_10143694
405 Ga0105248_10001174
406 Ga0105238_10029113
407 Ga0105238_10165233
408 Ga0105238_10293604
409 Ga0105249_10295614
410 Ga0099796_10000018
411 Ga0099796_10032458
412 Ga0105239_10116709
413 Ga0105239_10133415
414 Ga0157371_10025336
415 Ga0157370_10032839
416 Ga0157370_10080434
417 Ga0157370_10084099
418 Ga0163162_10120604
419 Ga0163163_10144023
420 Ga0183365_10001
421 Ga0213872_10005603
422 Ga0209026_1001123
423 Ga0209565_1000549
424 Ga0209673_1002030
425 Ga0209676_1000038
426 Ga0209676_1000099
427 Ga0209676_1000150
428 Ga0209676_1002748
429 Ga0209564_1000892
430 Ga0209564_1014442
431 Ga0209758_1001070
432 Ga0209758_1002860
433 Ga0209758_1007052
434 Ga0209050_1000029
435 Ga0209256_1001868
436 Ga0209256_1004775
437 Ga0209051_1006528
438 Ga0209257_1000066
439 Ga0209257_1000271
440 Ga0209257_1000306
441 Ga0209257_1001124
442 Ga0209257_1009168
443 Ga0207705_10003684
444 Ga0207654_10083001
445 Ga0207707_10012874
446 Ga0207695_10001525
447 Ga0207695_10001672
448 Ga0207695_10083278
449 Ga0207660_10038602
450 Ga0207657_10010016
451 Ga0207657_10104905
452 Ga0207652_10010693
453 Ga0207652_10231642
454 Ga0207694_10017352
455 Ga0207694_10140848
456 Ga0207694_10183114
457 Ga0207650_10053387
458 Ga0207690_10000104
459 Ga0207706_10049739
460 Ga0207686_10244856
461 Ga0207704_10000804
462 Ga0207711_10000552
463 Ga0207711_10052457
464 Ga0207679_10185002
465 Ga0207667_10022631
466 Ga0207667_10525682
467 Ga0207668_10020491
468 Ga0207668_10044043
469 Ga0207658_10030662
470 Ga0207639_10013720
471 Ga0207702_10273798
472 Ga0207641_10047603
473 Ga0207676_10017329
474 Ga0207675_100086076
475 Ga0207698_10017831
476 Ga0209179_1000095
477 Ga0207428_10007185
478 Ga0265354_1001807
479 Ga0268266_10000005
480 Ga0268266_10173710
481 Ga0268264_10000029
482 Ga0268264_10009980
483 Ga0268264_10349906
484 Ga0265326_10006638
485 Ga0307517_10004846
486 Ga0307517_10107179
487 Ga0307515_10052954
488 Ga0307515_10169788
489 Ga0265338_10009404
490 Ga0307511_10002785
491 Ga0265770_1001908
492 Ga0265760_10040578
493 Ga0265327_10000550
494 Ga0265327_10001692
495 Ga0265327_10023248
496 Ga0307513_10010039
497 Ga0307513_10016728
498 Ga0265314_10146843
499 Ga0307413_10050414
500 Ga0307406_10001625
501 Ga0307412_10024099
502 Ga0307414_10009797
503 Ga0307414_10018948
504 Ga0307414_10025711
505 Ga0307414_10332040
506 Ga0395899_0002368
507 Ga0395899_0113702
508 Ga0395900_0000006
509 Ga0395900_0062375
510 Ga0395898_0004001
511 Ga0395905_0000070
512 Ga0395905_0003274
513 Ga0395905_0268108
514 Ga0395905_0321148
515 Ga0395901_0000001
516 Ga0395901_0016778
517 Ga0436361_0400469
518 Ga0436361_0427388
519 Ga0439465_0016043
520 Ga0439442_008202
521 Ga0439446_0015441
522 Ga0466966_0000979
523 Ga0466961_0010192
524 Ga0466971_0064921
525 Ga0466959_0000108
526 Ga0466959_0027498
527 Ga0466958_0041171
528 Ga0495590_0003428
529 Ga0495638_0000130
530 Ga0495638_0000317
531 Ga0495638_0002616
532 Ga0495638_0013692
533 Ga0495650_0000020
534 Ga0495607_0053217
535 Ga0495583_0000001
536 Ga0495606_0005604
537 Ga0495606_0089823
538 Ga0495610_0001532
539 Ga0495610_0002540
540 Ga0495610_0002881
541 Ga0495616_0000461
542 Ga0495616_0050179
543 Ga0495631_0000671
544 Ga0495632_0000761
545 Ga0495648_0016467
546 Ga0495648_0029149
547 Ga0495654_0000139
548 Ga0495633_0001784
549 Ga0495668_0000910
550 Ga0495668_0010659
551 Ga0495668_0012429
552 Ga0495668_0013589
553 Ga0495625_0000283
554 Ga0495625_0015250
555 Ga0495625_0044074
556 Ga0495625_0075113
557 Ga0495589_0028095
558 Ga0495660_0002370
559 Ga0495672_0001159
560 Ga0495679_002473
561 Ga0495673_0000305
562 Ga0495673_0000514
563 Ga0495681_0028295
564 Ga0495686_0001490
565 Ga0495686_0009629
566 Ga0495686_0017975
567 Ga0495686_0039796
568 Ga0495686_0164301
569 Ga0496100_0108891
570 Ga0496106_0142389
571 Ga0496107_0000929
572 Ga0496112_0046387
573 Ga0496113_0043323
574 Ga0496115_0000636
575 Ga0496115_0006124
576 Ga0496115_0023993
577 Ga0496115_0040321
578 Ga0496121_0004688
579 Ga0496122_0019263
580 Ga0496123_0005117
581 Ga0496124_0053517
582 Ga0496124_0054757
583 Ga0496124_0068588
584 Ga0496125_0002497
585 Ga0496125_0018705
586 Ga0496125_0087481
587 Ga0496126_0001433
588 Ga0495678_000893
589 Ga0501032_0003465
590 Ga0501033_0007659
591 Ga0501033_0028087
592 Ga0501034_0116098
593 Ga0501034_0116666
594 Ga0501036_0253668
595 Ga0501036_0279231
596 Ga0501038_0087622
597 Ga0501043_0170952
598 Ga0501043_0316649
599 Ga0501047_0000722
600 Ga0501047_0003160
601 Ga0501047_0016523
602 Ga0501047_0199509
603 Ga0501047_0212932
604 Ga0501067_0000034
605 Ga0501068_0002041
606 Ga0501072_0032617
607 Ga0501072_0227242
608 Ga0501073_0000013
609 Ga0501077_0000423
610 Ga0501257_000269
611 Ga0501080_0029922
612 Ga0501083_0035999
613 Ga0501083_0075172
614 Ga0501035_0118687
615 Ga0501044_0001795
616 Ga0501044_0008820
617 nmdc:mga0k408_54351_c1
618 nmdc:mga07m45_73027_c1
619 nmdc:mga08y16_1766_c1
620 Ga0500635_0000786
621 Ga0500578_0000284
622 Ga0500644_0000212
623 Ga0500644_0010178
624 Ga0500644_0016733
625 Ga0500644_0073205
626 Ga0500651_0101111
627 Ga0500641_0002197
628 Ga0500554_002246
629 Ga0500556_0000529
630 Ga0500562_000467
631 Ga0500562_000559
632 Ga0500594_0000027
633 Ga0500595_001571
634 Ga0500595_002342
635 Ga0500595_007271
636 Ga0500595_046408
637 Ga0500608_000024
638 Ga0500608_000179
639 Ga0500618_000063
640 Ga0500658_0002670
641 Ga0500559_0000024
642 Ga0500559_0006575
643 Ga0500559_0009518
644 Ga0500559_0095841
645 Ga0500564_000539
646 Ga0500573_0093528
647 Ga0500577_0003216
648 Ga0500616_0036066
649 Ga0500622_0002048
650 Ga0500622_0022496
651 Ga0500622_0038029
652 Ga0500627_0014601
653 Ga0500645_000806
654 Ga0500645_010203
655 Ga0500609_000449
656 Ga0501082_0028643
657 2511120652
658 2585145962
659 2585150621
660 2585198139
661 2587915823
662 2643751049
663 2643782774
664 2643883941
665 2643926406
666 2643928083
667 2643999896
668 2644088326
669 2644224315
670 2644234749
671 2644343562
672 2644353177
673 2644368960
674 2644511017
675 2644549601
676 2739790348
677 2792458880
678 2819538739
679 2819646727
680 2843749036
681 2849565597
682 2849573968
683 2851155490
684 2857509263
685 2884962907
686 2898330913
687 2928532569
688 2928973732
689 2941486205
690 2977241305

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

287

400

0.9

PF12704

MacB_PCD

MacB-like periplasmic core domain

46

255

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w78-assembly1.cif.gz_B heme exporter hrtba in complex with mg-amppnp 0.5921 1 369
3ftj-assembly1.cif.gz_A crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans 0.5881 41 248
7w78-assembly1.cif.gz_B heme exporter hrtba in complex with mg-amppnp 0.5853 1 369
8i6q-assembly1.cif.gz_A cryo-em structure of pseudomonas aeruginosa ftse(wt)x complex in peptidisc 0.577 250 362
2dmr-assembly1.cif.gz_A dithionite reduced dmso reductase from rhodobacter capsulatus 0.576 139 191
ID Description Score Start End Superfamily
af_Q54TE0_97_205_3.30.70.330 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain 0.6673 202 249 3.30.70.330
af_C6SZT2_52_143_3.30.70.330 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain 0.6365 204 239 3.30.70.330
2mgzA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain 0.6221 201 239 3.30.70.330
af_Q4DB46_549_681_3.30.70.2760 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.6032 201 232 3.30.70.2760
af_P36629_287_401_3.30.70.330 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain 0.6025 204 239 3.30.70.330
ID Description Score Start End GO Terms
AF-A0A519QHF5-F1-model_v4 ABC transporter permease 0.9443 17 219
AF-A0A4V1UIK2-F1-model_v4 ABC transporter permease 0.9126 1 236 GO:0016020
AF-A0A519QHF5-F1-model_v4 ABC transporter permease 0.9097 17 219
AF-A0A2T5XPH4-F1-model_v4 deleted 0.8995 17 370
AF-A0A2T5XPH4-F1-model_v4 deleted 0.8735 17 370

Map