F415004

General Info

Members Datasets Scaffolds Average Seq Length
342 216 336 184

Family's Representative Sequence

Representative Sequence 3300003775|Ga0055524_1000317|Ga0055524_100031736
Length 203
Sequence VRLTLSLVGMPGGGKSTVGRLLARQLDMPFVDSDAEIEKDLGGESIKDYFARQGEASFRDLESRVIARLLEGAGADREMILATGGGAVLREINRERLKAHSTVVYLRSSPEELFRRLKHDTQRPLLQVANPLAKLRDLYGQRDPLYRRCAHFVLESSRPSVHGLANMILMQLELAGLIDPARVAATVGASEAPYTSGNDRSAS

Samples

Sample ID Description Type Environment
1 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
2 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
3 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
4 2831864461 Roseateles noduli HZ7 Isolate Nodule
5 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
6 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
7 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
8 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
9 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
10 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
11 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
12 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
13 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
14 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
15 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
16 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
17 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
18 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
19 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
20 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
21 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
22 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
23 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
24 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
25 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
26 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
27 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
28 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
29 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
30 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
31 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
32 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
33 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
34 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
35 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
36 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
37 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
38 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
39 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
40 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
41 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
42 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
43 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
44 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
45 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
46 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
47 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
48 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
49 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
50 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
51 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
54 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
58 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
59 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
60 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
61 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
62 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
63 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
64 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
65 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
68 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
69 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
73 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
74 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
82 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
83 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
87 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
88 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
89 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
92 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
95 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
96 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
97 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
99 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
101 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
104 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
130 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
134 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
135 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
136 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
137 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
138 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
139 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
140 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
141 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
142 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
143 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
144 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
145 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
146 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
147 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
148 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
149 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
150 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
151 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
152 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
153 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
154 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
155 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
156 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
157 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
158 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
159 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
160 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
161 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
162 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
163 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
164 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
165 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
166 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
167 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
168 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
169 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
170 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
171 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
172 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
173 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
174 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
175 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
176 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
177 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
178 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
179 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
180 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
181 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
182 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
183 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
184 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
185 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
186 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
187 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
188 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
189 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
190 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
191 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
192 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
193 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
194 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
195 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
196 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
197 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
198 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
199 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
200 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
201 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
202 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
203 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
204 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
205 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
206 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
207 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
208 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
209 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
210 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
211 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
212 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
213 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
214 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
215 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
216 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.25
Metatranscriptomes 0
Isolates 1.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 36.55
Nodule 0.88
Rhizoplane 2.05
Rhizosphere 47.37
Stem 0
Stem Tuber 0
Unclassified 13.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000024 3300002704 Bacteria 133561
2 JGI25156J39149_1000005 3300002705 Bacteria 263980
3 JGI25156J39149_1011615 3300002705 Bacteria 1981
4 JGI25154J39366_1000017 3300002738 Bacteria 252448
5 JGI25157J39369_1000003 3300002741 Bacteria 274935
6 JGI25150J39212_1005003 3300002774 Bacteria 2873
7 JGI25159J45721_1001965 3300002987 Bacteria 8190
8 JGI25151J46595_10003242 3300003187 Bacteria 9057
9 JGI25151J46595_10004391 3300003187 Bacteria 7471
10 JGI25153J46596_10001636 3300003215 Bacteria 13291
11 rootH1_10097901 3300003316 Bacteria 3840
12 rootH2_10028249 3300003320 Bacteria 4673
13 rootH2_10081784 3300003320 Bacteria 2128
14 rootL2_10003381 3300003322 Bacteria 63123
15 rootL2_10107491 3300003322 Bacteria 2847
16 rootL2_10147086 3300003322 Bacteria 1564
17 rootH1_10036641 3300003323 Bacteria 9957
18 rootH1_10042252 3300003323 Bacteria 3661
19 rootH1_10064552 3300003323 Bacteria 4696
20 Ga0055539_1000538 3300003752 Bacteria 11436
21 Ga0055533_1000040 3300003756 Bacteria 242927
22 Ga0055525_1000004 3300003759 Bacteria 888039
23 Ga0055525_1000457 3300003759 Bacteria 23158
24 Ga0055535_1000774 3300003761 Bacteria 23588
25 Ga0055529_1000053 3300003763 Bacteria 198996
26 Ga0055526_1001565 3300003771 Bacteria 16108
27 Ga0055526_1001575 3300003771 Bacteria 16046
28 Ga0055526_1005206 3300003771 Bacteria 7553
29 Ga0055537_1001319 3300003773 Bacteria 10151
30 Ga0055524_1000073 3300003775 Bacteria 123033
31 Ga0055524_1000317 3300003775 Bacteria 45570
32 Ga0055524_1005940 3300003775 Bacteria 5373
33 Ga0055536_1004311 3300003781 Bacteria 7318
34 Ga0055534_1000714 3300003784 Bacteria 16273
35 Ga0055528_1007563 3300003790 Bacteria 4788
36 Ga0055528_1037524 3300003790 Bacteria 1138
37 Ga0055530_10001983 3300003791 Bacteria 13918
38 Ga0055540_1000037 3300003792 Bacteria 162957
39 Ga0055531_10001381 3300003794 Bacteria 18012
40 Ga0055531_10006354 3300003794 Bacteria 6724
41 Ga0065165_1000290 3300005262 Bacteria 85623
42 Ga0065165_1001212 3300005262 Bacteria 29719
43 Ga0065165_1002321 3300005262 Bacteria 16656
44 Ga0065165_1006773 3300005262 Bacteria 5865
45 Ga0070658_10040386 3300005327 Bacteria 3764
46 Ga0070658_10150569 3300005327 Bacteria 1948
47 Ga0070658_10169870 3300005327 Bacteria 1832
48 Ga0070676_10021195 3300005328 Bacteria 3637
49 Ga0068869_100023567 3300005334 Bacteria 4253
50 Ga0068868_100233152 3300005338 Bacteria 1545
51 Ga0068868_100691547 3300005338 Bacteria 912
52 Ga0070660_100006480 3300005339 Bacteria 8116
53 Ga0070675_100070901 3300005354 Bacteria 2889
54 Ga0070671_100602991 3300005355 Unclassified 949
55 Ga0070673_100015711 3300005364 Bacteria 5327
56 Ga0070673_100019732 3300005364 Bacteria 4845
57 Ga0070659_100018642 3300005366 Bacteria 5238
58 Ga0070659_100105768 3300005366 Bacteria 2268
59 Ga0070667_100277559 3300005367 Bacteria 1504
60 Ga0070667_100741200 3300005367 Bacteria 910
61 Ga0070667_101565808 3300005367 Bacteria 619
62 Ga0070663_100129261 3300005455 Bacteria 1916
63 Ga0070678_100106607 3300005456 Bacteria 2184
64 Ga0068867_100319769 3300005459 Bacteria 1285
65 Ga0070706_100329915 3300005467 Bacteria 1423
66 Ga0070672_100336543 3300005543 Bacteria 1285
67 Ga0068855_100014930 3300005563 Bacteria 9358
68 Ga0068857_100112397 3300005577 Bacteria 2449
69 Ga0068854_100133114 3300005578 Bacteria 1900
70 Ga0068859_100346274 3300005617 Bacteria 1581
71 Ga0068859_100761994 3300005617 Bacteria 1056
72 Ga0068864_100064947 3300005618 Bacteria 3166
73 Ga0068861_100051704 3300005719 Bacteria 3120
74 Ga0068858_100341417 3300005842 Bacteria 1433
75 Ga0068860_100047191 3300005843 Bacteria 4106
76 Ga0068860_100102709 3300005843 Bacteria 2728
77 Ga0075365_10079935 3300006038 Bacteria 2213
78 Ga0075365_10643946 3300006038 Bacteria 749
79 Ga0075368_10003301 3300006042 Bacteria 5372
80 Ga0075364_10035671 3300006051 Bacteria 3214
81 Ga0075362_10025205 3300006177 Bacteria 2529
82 Ga0075362_10197575 3300006177 Bacteria 978
83 Ga0075367_10139450 3300006178 Bacteria 1502
84 Ga0075367_10140264 3300006178 Bacteria 1497
85 Ga0075369_10173737 3300006186 Bacteria 990
86 Ga0075366_10000511 3300006195 Bacteria 17917
87 Ga0075366_10002013 3300006195 Bacteria 10309
88 Ga0075366_10012379 3300006195 Bacteria 4839
89 Ga0075366_10012389 3300006195 Bacteria 4837
90 Ga0075366_10014929 3300006195 Bacteria 4441
91 Ga0075366_10016715 3300006195 Bacteria 4218
92 Ga0075366_10118978 3300006195 Bacteria 1591
93 Ga0075370_10000514 3300006353 Bacteria 14756
94 Ga0075370_10003854 3300006353 Bacteria 7182
95 Ga0075370_10014058 3300006353 Bacteria 4263
96 Ga0075370_10038290 3300006353 Bacteria 2698
97 Ga0068865_101436396 3300006881 Bacteria 617
98 Ga0097620_100346257 3300006931 Bacteria 1581
99 Ga0097620_100761950 3300006931 Bacteria 1056
100 Ga0099823_1000016 3300006944 Bacteria 87614
101 Ga0105245_10234563 3300009098 Bacteria 1776
102 Ga0105241_10400488 3300009174 Bacteria 1204
103 Ga0105241_11268141 3300009174 Unclassified 700
104 Ga0105242_10155877 3300009176 Bacteria 1995
105 Ga0105248_10056750 3300009177 Bacteria 4393
106 Ga0105237_10026249 3300009545 Bacteria 5953
107 Ga0105246_10076786 3300011119 Bacteria 2368
108 Ga0157319_1000005 3300012497 Bacteria 372810
109 Ga0157374_10539565 3300013296 Bacteria 1173
110 Ga0157378_10096579 3300013297 Bacteria 2693
111 Ga0163162_10195045 3300013306 Bacteria 2154
112 Ga0163162_11050759 3300013306 Bacteria 922
113 Ga0157375_10074999 3300013308 Bacteria 3406
114 Ga0157375_10208315 3300013308 Bacteria 2112
115 Ga0157375_11071097 3300013308 Bacteria 943
116 Ga0157375_11166449 3300013308 Bacteria 903
117 Ga0157375_11452589 3300013308 Bacteria 809
118 Ga0163163_10384990 3300014325 Bacteria 1460
119 Ga0157379_10031217 3300014968 Bacteria 4746
120 Ga0157379_10866391 3300014968 Bacteria 855
121 Ga0213872_10000131 3300021361 Bacteria 68632
122 Ga0213872_10146497 3300021361 Bacteria 1033
123 Ga0209435_100002 3300025206 Bacteria 794178
124 Ga0209674_100066 3300025226 Bacteria 256739
125 Ga0209674_109552 3300025226 Bacteria 1076
126 Ga0209563_100013 3300025230 Bacteria 941463
127 Ga0209563_100129 3300025230 Bacteria 99977
128 Ga0209563_106452 3300025230 Bacteria 2011
129 Ga0209258_100074 3300025242 Bacteria 271062
130 Ga0209258_101051 3300025242 Bacteria 12152
131 Ga0207425_1000513 3300025245 Bacteria 23641
132 Ga0209646_1000001 3300025246 Bacteria 3092932
133 Ga0209026_1000001 3300025250 Bacteria 1228671
134 Ga0209677_100052 3300025253 Bacteria 167826
135 Ga0209148_1035094 3300025254 Bacteria 723
136 Ga0209759_1000001 3300025256 Bacteria 2799452
137 Ga0209759_1000564 3300025256 Bacteria 37417
138 Ga0209759_1001901 3300025256 Bacteria 10270
139 Ga0209759_1014434 3300025256 Bacteria 2089
140 Ga0209565_1000128 3300025263 Bacteria 108959
141 Ga0209455_1000066 3300025272 Bacteria 316811
142 Ga0209673_1000008 3300025273 Bacteria 626013
143 Ga0209673_1005115 3300025273 Bacteria 6721
144 Ga0209673_1007131 3300025273 Bacteria 5231
145 Ga0209673_1023613 3300025273 Bacteria 2089
146 Ga0209130_1000338 3300025284 Bacteria 53907
147 Ga0209675_1000099 3300025291 Bacteria 128911
148 Ga0209676_1000023 3300025292 Bacteria 589732
149 Ga0209025_1003851 3300025294 Bacteria 13627
150 Ga0209025_1013957 3300025294 Bacteria 4998
151 Ga0209564_1000008 3300025295 Bacteria 953227
152 Ga0209564_1000543 3300025295 Bacteria 60959
153 Ga0209564_1001126 3300025295 Bacteria 31456
154 Ga0209758_1000124 3300025297 Bacteria 189933
155 Ga0209758_1018620 3300025297 Bacteria 3392
156 Ga0209050_1000022 3300025298 Bacteria 565239
157 Ga0209050_1000718 3300025298 Bacteria 48528
158 Ga0209050_1002415 3300025298 Bacteria 16117
159 Ga0209256_1000001 3300025299 Bacteria 2166974
160 Ga0209256_1000410 3300025299 Bacteria 67789
161 Ga0209256_1000820 3300025299 Bacteria 39537
162 Ga0209256_1038224 3300025299 Bacteria 1245
163 Ga0207426_1003322 3300025302 Bacteria 8893
164 Ga0209051_1000013 3300025303 Bacteria 565239
165 Ga0209051_1000726 3300025303 Bacteria 35771
166 Ga0209257_1000042 3300025304 Bacteria 537149
167 Ga0209257_1000774 3300025304 Bacteria 47334
168 Ga0209257_1001459 3300025304 Bacteria 27942
169 Ga0207645_10040533 3300025907 Bacteria 2982
170 Ga0207705_10090145 3300025909 Bacteria 2244
171 Ga0207705_10107003 3300025909 Bacteria 2063
172 Ga0207705_10632259 3300025909 Bacteria 832
173 Ga0207671_10130167 3300025914 Bacteria 1931
174 Ga0207657_10019672 3300025919 Bacteria 6402
175 Ga0207659_10161332 3300025926 Bacteria 1760
176 Ga0207644_10151077 3300025931 Bacteria 1797
177 Ga0207644_10160624 3300025931 Bacteria 1746
178 Ga0207644_10683904 3300025931 Bacteria 855
179 Ga0207706_10013768 3300025933 Bacteria 7339
180 Ga0207686_10014377 3300025934 Bacteria 4404
181 Ga0207691_10075863 3300025940 Bacteria 3030
182 Ga0207711_10006659 3300025941 Bacteria 9726
183 Ga0207689_10024806 3300025942 Bacteria 5028
184 Ga0207689_10115660 3300025942 Bacteria 2205
185 Ga0207667_10027371 3300025949 Bacteria 6206
186 Ga0207667_10218492 3300025949 Bacteria 1953
187 Ga0207651_10002726 3300025960 Bacteria 8474
188 Ga0207651_10862850 3300025960 Bacteria 805
189 Ga0207640_10058224 3300025981 Bacteria 2545
190 Ga0207658_10259743 3300025986 Bacteria 1480
191 Ga0207658_10751100 3300025986 Bacteria 883
192 Ga0207658_11277293 3300025986 Bacteria 671
193 Ga0207677_10351644 3300026023 Bacteria 1235
194 Ga0207677_10490129 3300026023 Unclassified 1061
195 Ga0207703_10254030 3300026035 Bacteria 1586
196 Ga0207678_10064244 3300026067 Bacteria 3154
197 Ga0207641_10066689 3300026088 Bacteria 3081
198 Ga0207648_10033989 3300026089 Bacteria 4496
199 Ga0207676_10014402 3300026095 Bacteria 5690
200 Ga0207674_10045888 3300026116 Bacteria 4491
201 Ga0207675_100019391 3300026118 Bacteria 6345
202 Ga0209389_1001405 3300027296 Bacteria 16897
203 Ga0209371_1007228 3300027312 Bacteria 3912
204 Ga0209974_10008186 3300027876 Bacteria 3579
205 Ga0209974_10011629 3300027876 Bacteria 2954
206 Ga0268264_10030739 3300028381 Bacteria 4402
207 Ga0265336_10000024 3300028666 Bacteria 188787
208 Ga0307517_10001980 3300028786 Bacteria 33373
209 Ga0307517_10103140 3300028786 Bacteria 2231
210 Ga0307515_10442275 3300028794 Unclassified 917
211 Ga0265324_10001205 3300029957 Bacteria 15349
212 Ga0268256_1007318 3300030500 Bacteria 3957
213 Ga0307513_10006082 3300031456 Bacteria 15835
214 Ga0307513_10018577 3300031456 Bacteria 8302
215 Ga0307513_10056911 3300031456 Bacteria 4171
216 Ga0307509_10000249 3300031507 Bacteria 87094
217 Ga0307509_10004509 3300031507 Bacteria 20026
218 Ga0307509_10008908 3300031507 Bacteria 12652
219 Ga0307509_10208401 3300031507 Bacteria 1783
220 Ga0307509_10393090 3300031507 Bacteria 1096
221 Ga0307509_10647363 3300031507 Bacteria 726
222 Ga0307408_100019721 3300031548 Bacteria 4543
223 Ga0307408_100022284 3300031548 Bacteria 4302
224 Ga0307508_10000143 3300031616 Bacteria 85046
225 Ga0307508_10005160 3300031616 Bacteria 12503
226 Ga0307508_10036011 3300031616 Bacteria 4457
227 Ga0307516_10001817 3300031730 Bacteria 29320
228 Ga0307516_10005873 3300031730 Bacteria 14531
229 Ga0307406_10262481 3300031901 Bacteria 1307
230 Ga0307412_10019955 3300031911 Bacteria 4070
231 Ga0307507_10281174 3300033179 Bacteria 1040
232 Ga0307510_10048179 3300033180 Bacteria 4551
233 Ga0373931_0014455 3300035691 Bacteria 3859
234 Ga0373937_0325909 3300036401 Bacteria 1453
235 Ga0373925_0157276 3300037068 Bacteria 1788
236 Ga0395905_0053758 3300037471 Bacteria 3769
237 Ga0395905_0084542 3300037471 Bacteria 2973
238 Ga0395905_0087289 3300037471 Bacteria 2925
239 Ga0395905_0145603 3300037471 Bacteria 2229
240 Ga0436361_0185784 3300039447 Bacteria 1043
241 Ga0451800_1312607 3300041459 Bacteria 850
242 Ga0451807_2452816 3300041486 Bacteria 836
243 Ga0439459_0004541 3300042438 Bacteria 2237
244 Ga0439464_0141691 3300042439 Bacteria 749
245 Ga0453683_0005720 3300044673 Bacteria 8629
246 Ga0466965_0017789 3300044683 Bacteria 3400
247 Ga0466965_0036696 3300044683 Bacteria 2404
248 Ga0466965_0410489 3300044683 Bacteria 749
249 Ga0466966_0001608 3300044684 Bacteria 14540
250 Ga0466961_0021561 3300044693 Bacteria 4145
251 Ga0466961_0041184 3300044693 Bacteria 2961
252 Ga0466961_0227077 3300044693 Bacteria 1149
253 Ga0466963_0093568 3300044694 Bacteria 2049
254 Ga0466964_0011087 3300044706 Bacteria 3405
255 Ga0466964_0152551 3300044706 Bacteria 1072
256 Ga0453684_0026485 3300044712 Bacteria 8369
257 Ga0453684_0062252 3300044712 Bacteria 4781
258 Ga0453684_0064942 3300044712 Bacteria 4658
259 Ga0453684_1337710 3300044712 Bacteria 746
260 Ga0466971_0001621 3300044719 Bacteria 9495
261 Ga0466971_0118125 3300044719 Bacteria 1226
262 Ga0466968_0051911 3300044735 Bacteria 1753
263 Ga0466970_0000785 3300044765 Bacteria 15347
264 Ga0466957_0153408 3300044842 Bacteria 1491
265 Ga0466957_0215530 3300044842 Bacteria 1266
266 Ga0466960_0100091 3300044901 Bacteria 1491
267 Ga0451576_0018111 3300045051 Bacteria 7728
268 Ga0466958_0017287 3300045836 Bacteria 4166
269 Ga0466958_0021302 3300045836 Bacteria 3786
270 Ga0495592_0002035 3300046454 Bacteria 14230
271 Ga0495651_0571138 3300046462 Bacteria 716
272 Ga0495639_0186840 3300046475 Bacteria 1010
273 Ga0495585_0252795 3300046492 Bacteria 879
274 Ga0495583_0000946 3300046506 Bacteria 33756
275 Ga0495606_0003394 3300046507 Bacteria 16932
276 Ga0495632_0017604 3300046519 Bacteria 3939
277 Ga0495648_0026255 3300046524 Bacteria 3925
278 Ga0495652_0414985 3300046529 Bacteria 950
279 Ga0495621_0002386 3300046539 Bacteria 5055
280 Ga0495622_0206595 3300046557 Bacteria 874
281 Ga0495625_0035306 3300046660 Bacteria 3686
282 Ga0495625_0080518 3300046660 Bacteria 2268
283 Ga0495625_0447064 3300046660 Bacteria 799
284 Ga0495670_0017119 3300046691 Bacteria 3565
285 Ga0495649_0003229 3300046694 Bacteria 11125
286 Ga0495649_0098428 3300046694 Bacteria 1556
287 Ga0495589_0004026 3300046794 Bacteria 7878
288 Ga0495686_0003418 3300047472 Bacteria 13793
289 Ga0495686_0034424 3300047472 Bacteria 3262
290 Ga0496100_0189109 3300048903 Bacteria 1494
291 Ga0496108_0112343 3300048911 Bacteria 2331
292 Ga0496109_0186635 3300048912 Bacteria 1948
293 Ga0496112_0029931 3300048915 Bacteria 5267
294 Ga0496113_0180015 3300048916 Bacteria 1676
295 Ga0496118_0201811 3300048921 Bacteria 1177
296 Ga0496124_0026809 3300048927 Bacteria 5188
297 Ga0501198_000024 3300049649 Bacteria 67171
298 Ga0501222_000020 3300049662 Bacteria 67164
299 Ga0501257_069067 3300049686 Bacteria 901
300 nmdc:mga00v17_56082_c1 3300050491 Bacteria 2408
301 nmdc:mga0yw44_250348_c1 3300050492 Bacteria 1179
302 nmdc:mga0yw44_597863_c1 3300050492 Bacteria 749
303 nmdc:mga0yw44_74542_c1 3300050492 Bacteria 2114
304 nmdc:mga0k408_10480_c1 3300050493 Bacteria 5014
305 nmdc:mga0k408_110738_c1 3300050493 Bacteria 1623
306 nmdc:mga0k408_13688_c1 3300050493 Bacteria 4455
307 nmdc:mga0k408_194208_c1 3300050493 Bacteria 1211
308 nmdc:mga0k408_1978_c1 3300050493 Bacteria 3387
309 nmdc:mga0k408_49346_c1 3300050493 Bacteria 2436
310 nmdc:mga0k408_8309_c1 3300050493 Bacteria 2683
311 nmdc:mga06z11_354347_c1 3300050494 Bacteria 879
312 nmdc:mga07m45_268485_c1 3300050496 Unclassified 993
313 nmdc:mga07m45_293_c1 3300050496 Bacteria 20191
314 nmdc:mga07m45_30013_c1 3300050496 Bacteria 3010
315 nmdc:mga07m45_3993_c1 3300050496 Bacteria 7176
316 nmdc:mga07m45_68595_c1 3300050496 Bacteria 2016
317 nmdc:mga07m45_78333_c1 3300050496 Bacteria 1886
318 nmdc:mga0sz30_18578_c1 3300050516 Bacteria 2784
319 nmdc:mga0sz30_40319_c1 3300050516 Bacteria 1963
320 nmdc:mga0sz30_94122_c1 3300050516 Bacteria 1305
321 Ga0500635_0000008 3300053080 Bacteria 167327
322 Ga0500578_0155688 3300053086 Unclassified 1421
323 Ga0500583_0043354 3300053092 Bacteria 2055
324 Ga0500651_0048364 3300053093 Bacteria 2672
325 Ga0500651_0087045 3300053093 Bacteria 1929
326 Ga0500572_099770 3300053111 Bacteria 927
327 Ga0500593_001947 3300053117 Bacteria 7453
328 Ga0500608_198378 3300053122 Bacteria 832
329 Ga0500568_0022830 3300053139 Bacteria 2669
330 Ga0500586_009093 3300053145 Bacteria 2740
331 Ga0500589_092604 3300053147 Bacteria 1328
332 Ga0500619_129372 3300053154 Bacteria 860
333 Ga0500622_0000552 3300053156 Bacteria 34296
334 Ga0500645_001906 3300053730 Bacteria 9923
335 Ga0500661_017150 3300055283 Bacteria 1293
336 Ga0466962_0080906 3300061719 Bacteria 1553

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050496 nmdc:mga07m45_68595_c1 nmdc:mga07m45_68595_c1_157_621 142
2 3300042439 Ga0439464_0141691 Ga0439464_0141691_14_553 147
3 3300003320 rootH2_10028249 rootH2_100282493 149
4 3300006881 Ga0068865_101436396 Ga0068865_1014363961 149
5 3300025931 Ga0207644_10683904 Ga0207644_106839042 149
6 3300028666 Ga0265336_10000024 Ga0265336_10000024153 149
7 3300029957 Ga0265324_10001205 Ga0265324_100012055 149
8 3300046539 Ga0495621_0002386 Ga0495621_0002386_1430_1915 149
9 3300046660 Ga0495625_0035306 Ga0495625_0035306_3180_3647 149
10 3300005367 Ga0070667_100741200 Ga0070667_1007412002 150
11 3300013308 Ga0157375_11166449 Ga0157375_111664492 150
12 3300014968 Ga0157379_10031217 Ga0157379_100312171 154
13 3300044683 Ga0466965_0017789 Ga0466965_0017789_2785_3318 154
14 3300044901 Ga0466960_0100091 Ga0466960_0100091_713_1246 154
15 3300025986 Ga0207658_10751100 Ga0207658_107511001 157
16 3300048921 Ga0496118_0201811 Ga0496118_0201811_523_1029 157
17 3300005262 Ga0065165_1001212 Ga0065165_10012128 159
18 3300025273 Ga0209673_1007131 Ga0209673_10071313 159
19 3300025298 Ga0209050_1000718 Ga0209050_100071818 159
20 3300025299 Ga0209256_1038224 Ga0209256_10382241 159
21 3300037471 Ga0395905_0087289 Ga0395905_0087289_1464_2045 161
22 3300044712 Ga0453684_1337710 Ga0453684_1337710_12_554 162
23 3300044683 Ga0466965_0036696 Ga0466965_0036696_502_1011 163
24 3300044684 Ga0466966_0001608 Ga0466966_0001608_4529_5038 163
25 3300044693 Ga0466961_0227077 Ga0466961_0227077_349_858 163
26 3300044706 Ga0466964_0152551 Ga0466964_0152551_99_608 163
27 3300044719 Ga0466971_0001621 Ga0466971_0001621_8940_9449 163
28 3300044765 Ga0466970_0000785 Ga0466970_0000785_4337_4846 163
29 3300044842 Ga0466957_0153408 Ga0466957_0153408_178_687 163
30 3300045836 Ga0466958_0017287 Ga0466958_0017287_1312_1821 163
31 iso_pu_bacteria 2643221592 2643972861 163
32 iso_pu_bacteria 2643221625 2644143292 163
33 iso_pu_bacteria 2643221648 2644276271 163
34 3300003316 rootH1_10097901 rootH1_100979012 164
35 3300003320 rootH2_10081784 rootH2_100817842 164
36 3300003322 rootL2_10107491 rootL2_101074913 164
37 3300003323 rootH1_10064552 rootH1_100645522 164
38 3300003752 Ga0055539_1000538 Ga0055539_10005385 164
39 3300003756 Ga0055533_1000040 Ga0055533_100004086 164
40 3300003759 Ga0055525_1000457 Ga0055525_10004578 164
41 3300003761 Ga0055535_1000774 Ga0055535_10007745 164
42 3300003763 Ga0055529_1000053 Ga0055529_1000053112 164
43 3300005327 Ga0070658_10040386 Ga0070658_100403862 164
44 3300005327 Ga0070658_10169870 Ga0070658_101698702 164
45 3300005366 Ga0070659_100105768 Ga0070659_1001057682 164
46 3300005455 Ga0070663_100129261 Ga0070663_1001292612 164
47 3300005459 Ga0068867_100319769 Ga0068867_1003197691 164
48 3300005563 Ga0068855_100014930 Ga0068855_1000149303 164
49 3300005577 Ga0068857_100112397 Ga0068857_1001123972 164
50 3300005578 Ga0068854_100133114 Ga0068854_1001331142 164
51 3300006042 Ga0075368_10003301 Ga0075368_100033014 164
52 3300006051 Ga0075364_10035671 Ga0075364_100356712 164
53 3300006177 Ga0075362_10025205 Ga0075362_100252052 164
54 3300006178 Ga0075367_10139450 Ga0075367_101394502 164
55 3300006195 Ga0075366_10002013 Ga0075366_100020137 164
56 3300009098 Ga0105245_10234563 Ga0105245_102345632 164
57 3300009174 Ga0105241_10400488 Ga0105241_104004882 164
58 3300009174 Ga0105241_11268141 Ga0105241_112681411 164
59 3300009176 Ga0105242_10155877 Ga0105242_101558772 164
60 3300009545 Ga0105237_10026249 Ga0105237_100262492 164
61 3300011119 Ga0105246_10076786 Ga0105246_100767862 164
62 3300013297 Ga0157378_10096579 Ga0157378_100965793 164
63 3300013306 Ga0163162_11050759 Ga0163162_110507592 164
64 3300013308 Ga0157375_10208315 Ga0157375_102083152 164
65 3300014968 Ga0157379_10866391 Ga0157379_108663911 164
66 3300021361 Ga0213872_10146497 Ga0213872_101464972 164
67 3300025226 Ga0209674_100066 Ga0209674_100066154 164
68 3300025230 Ga0209563_100129 Ga0209563_1001295 164
69 3300025230 Ga0209563_106452 Ga0209563_1064522 164
70 3300025242 Ga0209258_100074 Ga0209258_10007474 164
71 3300025242 Ga0209258_101051 Ga0209258_1010519 164
72 3300025253 Ga0209677_100052 Ga0209677_100052154 164
73 3300025254 Ga0209148_1035094 Ga0209148_10350941 164
74 3300025256 Ga0209759_1000564 Ga0209759_100056414 164
75 3300025256 Ga0209759_1014434 Ga0209759_10144342 164
76 3300025272 Ga0209455_1000066 Ga0209455_1000066114 164
77 3300025909 Ga0207705_10090145 Ga0207705_100901452 164
78 3300025909 Ga0207705_10107003 Ga0207705_101070032 164
79 3300025914 Ga0207671_10130167 Ga0207671_101301672 164
80 3300025933 Ga0207706_10013768 Ga0207706_100137685 164
81 3300025942 Ga0207689_10115660 Ga0207689_101156602 164
82 3300025949 Ga0207667_10027371 Ga0207667_100273712 164
83 3300025960 Ga0207651_10002726 Ga0207651_100027266 164
84 3300025981 Ga0207640_10058224 Ga0207640_100582243 164
85 3300025986 Ga0207658_11277293 Ga0207658_112772931 164
86 3300026023 Ga0207677_10490129 Ga0207677_104901291 164
87 3300026067 Ga0207678_10064244 Ga0207678_100642442 164
88 3300026116 Ga0207674_10045888 Ga0207674_100458884 164
89 3300028786 Ga0307517_10103140 Ga0307517_101031402 164
90 3300028794 Ga0307515_10442275 Ga0307515_104422752 164
91 3300031507 Ga0307509_10208401 Ga0307509_102084012 164
92 3300031730 Ga0307516_10005873 Ga0307516_100058735 164
93 3300037471 Ga0395905_0053758 Ga0395905_0053758_951_1463 164
94 3300046462 Ga0495651_0571138 Ga0495651_0571138_124_636 164
95 3300046475 Ga0495639_0186840 Ga0495639_0186840_90_602 164
96 3300046492 Ga0495585_0252795 Ga0495585_0252795_61_573 164
97 3300046529 Ga0495652_0414985 Ga0495652_0414985_40_552 164
98 3300046557 Ga0495622_0206595 Ga0495622_0206595_43_555 164
99 3300048911 Ga0496108_0112343 Ga0496108_0112343_1448_1975 164
100 3300048912 Ga0496109_0186635 Ga0496109_0186635_255_782 164
101 3300050491 nmdc:mga00v17_56082_c1 nmdc:mga00v17_56082_c1_1332_1844 164
102 3300050493 nmdc:mga0k408_10480_c1 nmdc:mga0k408_10480_c1_1785_2297 164
103 3300050493 nmdc:mga0k408_1978_c1 nmdc:mga0k408_1978_c1_2214_2726 164
104 3300050496 nmdc:mga07m45_268485_c1 nmdc:mga07m45_268485_c1_12_524 164
105 3300050496 nmdc:mga07m45_78333_c1 nmdc:mga07m45_78333_c1_12_524 164
106 3300050516 nmdc:mga0sz30_40319_c1 nmdc:mga0sz30_40319_c1_89_601 164
107 3300053080 Ga0500635_0000008 Ga0500635_0000008_33300_33812 164
108 3300053122 Ga0500608_198378 Ga0500608_198378_286_798 164
109 3300053147 Ga0500589_092604 Ga0500589_092604_364_876 164
110 3300055283 Ga0500661_017150 Ga0500661_017150_429_941 164
111 3300003759 Ga0055525_1000004 Ga0055525_1000004163 166
112 3300025226 Ga0209674_109552 Ga0209674_1095522 166
113 3300025230 Ga0209563_100013 Ga0209563_100013163 166
114 3300003215 JGI25153J46596_10001636 JGI25153J46596_100016363 167
115 3300003322 rootL2_10003381 rootL2_1000338152 167
116 3300003323 rootH1_10042252 rootH1_100422523 167
117 3300003771 Ga0055526_1001565 Ga0055526_10015652 167
118 3300003794 Ga0055531_10006354 Ga0055531_100063542 167
119 3300005262 Ga0065165_1000290 Ga0065165_100029036 167
120 3300005328 Ga0070676_10021195 Ga0070676_100211954 167
121 3300005338 Ga0068868_100691547 Ga0068868_1006915472 167
122 3300005354 Ga0070675_100070901 Ga0070675_1000709012 167
123 3300005364 Ga0070673_100019732 Ga0070673_1000197322 167
124 3300005367 Ga0070667_100277559 Ga0070667_1002775592 167
125 3300006038 Ga0075365_10079935 Ga0075365_100799352 167
126 3300006353 Ga0075370_10003854 Ga0075370_100038542 167
127 3300021361 Ga0213872_10000131 Ga0213872_1000013134 167
128 3300025273 Ga0209673_1005115 Ga0209673_10051152 167
129 3300025295 Ga0209564_1000008 Ga0209564_1000008252 167
130 3300025297 Ga0209758_1000124 Ga0209758_100012419 167
131 3300025299 Ga0209256_1000410 Ga0209256_100041023 167
132 3300025907 Ga0207645_10040533 Ga0207645_100405333 167
133 3300025940 Ga0207691_10075863 Ga0207691_100758631 167
134 3300028786 Ga0307517_10001980 Ga0307517_1000198022 167
135 3300031456 Ga0307513_10006082 Ga0307513_100060823 167
136 3300031456 Ga0307513_10056911 Ga0307513_100569112 167
137 3300031507 Ga0307509_10000249 Ga0307509_1000024953 167
138 3300031507 Ga0307509_10008908 Ga0307509_100089086 167
139 3300031507 Ga0307509_10393090 Ga0307509_103930902 167
140 3300031507 Ga0307509_10647363 Ga0307509_106473632 167
141 3300031548 Ga0307408_100019721 Ga0307408_1000197215 167
142 3300031616 Ga0307508_10005160 Ga0307508_100051603 167
143 3300031616 Ga0307508_10036011 Ga0307508_100360112 167
144 3300031911 Ga0307412_10019955 Ga0307412_100199552 167
145 3300033179 Ga0307507_10281174 Ga0307507_102811742 167
146 3300033180 Ga0307510_10048179 Ga0307510_100481792 167
147 3300046454 Ga0495592_0002035 Ga0495592_0002035_7010_7555 167
148 3300050492 nmdc:mga0yw44_74542_c1 nmdc:mga0yw44_74542_c1_1578_2084 167
149 3300053086 Ga0500578_0155688 Ga0500578_0155688_295_840 167
150 3300053154 Ga0500619_129372 Ga0500619_129372_291_836 167
151 3300053730 Ga0500645_001906 Ga0500645_001906_2565_3110 167
152 3300044735 Ga0466968_0051911 Ga0466968_0051911_829_1356 169
153 3300037471 Ga0395905_0084542 Ga0395905_0084542_178_714 170
154 3300044693 Ga0466961_0041184 Ga0466961_0041184_383_913 170
155 3300044706 Ga0466964_0011087 Ga0466964_0011087_451_981 170
156 3300044719 Ga0466971_0118125 Ga0466971_0118125_426_956 170
157 3300044842 Ga0466957_0215530 Ga0466957_0215530_434_964 170
158 3300046506 Ga0495583_0000946 Ga0495583_0000946_13554_14084 170
159 3300046507 Ga0495606_0003394 Ga0495606_0003394_12999_13529 170
160 3300046694 Ga0495649_0003229 Ga0495649_0003229_3959_4489 170
161 3300046794 Ga0495589_0004026 Ga0495589_0004026_3403_3933 170
162 3300050493 nmdc:mga0k408_49346_c1 nmdc:mga0k408_49346_c1_238_804 170
163 3300053093 Ga0500651_0087045 Ga0500651_0087045_1004_1534 170
164 3300061719 Ga0466962_0080906 Ga0466962_0080906_314_844 170
165 3300005355 Ga0070671_100602991 Ga0070671_1006029912 171
166 3300005843 Ga0068860_100047191 Ga0068860_1000471914 171
167 3300039447 Ga0436361_0185784 Ga0436361_0185784_214_753 171
168 3300044693 Ga0466961_0021561 Ga0466961_0021561_1202_1735 171
169 3300045836 Ga0466958_0021302 Ga0466958_0021302_855_1388 171
170 iso_pu_bacteria 2928115317 2928118054 171
171 3300005617 Ga0068859_100346274 Ga0068859_1003462742 172
172 3300006931 Ga0097620_100346257 Ga0097620_1003462572 172
173 3300042438 Ga0439459_0004541 Ga0439459_0004541_1234_1833 172
174 3300044712 Ga0453684_0064942 Ga0453684_0064942_723_1241 172
175 3300047472 Ga0495686_0034424 Ga0495686_0034424_2392_2928 172
176 3300049649 Ga0501198_000024 Ga0501198_000024_58188_58730 172
177 3300049662 Ga0501222_000020 Ga0501222_000020_8460_9002 172
178 3300050496 nmdc:mga07m45_30013_c1 nmdc:mga07m45_30013_c1_2388_2987 172
179 iso_pu_bacteria 2831864461 2831864621 172
180 iso_pu_bacteria 2886848708 2886849312 172
181 3300044673 Ga0453683_0005720 Ga0453683_0005720_3970_4491 173
182 3300044712 Ga0453684_0026485 Ga0453684_0026485_3837_4358 173
183 3300045051 Ga0451576_0018111 Ga0451576_0018111_2446_2967 173
184 3300003323 rootH1_10036641 rootH1_100366419 174
185 3300003775 Ga0055524_1005940 Ga0055524_10059405 174
186 3300003790 Ga0055528_1037524 Ga0055528_10375242 174
187 3300005262 Ga0065165_1002321 Ga0065165_10023215 174
188 3300005617 Ga0068859_100761994 Ga0068859_1007619942 174
189 3300005618 Ga0068864_100064947 Ga0068864_1000649473 174
190 3300005842 Ga0068858_100341417 Ga0068858_1003414172 174
191 3300006931 Ga0097620_100761950 Ga0097620_1007619502 174
192 3300006944 Ga0099823_1000016 Ga0099823_100001658 174
193 3300012497 Ga0157319_1000005 Ga0157319_1000005306 174
194 3300013296 Ga0157374_10539565 Ga0157374_105395651 174
195 3300013306 Ga0163162_10195045 Ga0163162_101950452 174
196 3300013308 Ga0157375_11071097 Ga0157375_110710971 174
197 3300025273 Ga0209673_1023613 Ga0209673_10236132 174
198 3300025298 Ga0209050_1002415 Ga0209050_100241513 174
199 3300025299 Ga0209256_1000820 Ga0209256_100082011 174
200 3300025303 Ga0209051_1000726 Ga0209051_100072623 174
201 3300025304 Ga0209257_1001459 Ga0209257_10014596 174
202 3300025931 Ga0207644_10151077 Ga0207644_101510772 174
203 3300026035 Ga0207703_10254030 Ga0207703_102540302 174
204 3300026088 Ga0207641_10066689 Ga0207641_100666892 174
205 3300026095 Ga0207676_10014402 Ga0207676_100144025 174
206 3300027296 Ga0209389_1001405 Ga0209389_10014055 174
207 3300044683 Ga0466965_0410489 Ga0466965_0410489_22_549 174
208 3300044694 Ga0466963_0093568 Ga0466963_0093568_644_1249 174
209 3300048927 Ga0496124_0026809 Ga0496124_0026809_1025_1630 174
210 3300049686 Ga0501257_069067 Ga0501257_069067_139_666 174
211 3300050492 nmdc:mga0yw44_250348_c1 nmdc:mga0yw44_250348_c1_610_1137 174
212 3300053139 Ga0500568_0022830 Ga0500568_0022830_512_1081 174
213 3300053145 Ga0500586_009093 Ga0500586_009093_471_1025 174
214 3300005334 Ga0068869_100023567 Ga0068869_1000235672 175
215 3300005338 Ga0068868_100233152 Ga0068868_1002331522 175
216 3300005719 Ga0068861_100051704 Ga0068861_1000517042 175
217 3300013308 Ga0157375_11452589 Ga0157375_114525891 175
218 3300014325 Ga0163163_10384990 Ga0163163_103849902 175
219 3300025934 Ga0207686_10014377 Ga0207686_100143772 175
220 3300025942 Ga0207689_10024806 Ga0207689_100248064 175
221 3300025986 Ga0207658_10259743 Ga0207658_102597432 175
222 3300026023 Ga0207677_10351644 Ga0207677_103516442 175
223 3300026118 Ga0207675_100019391 Ga0207675_1000193914 175
224 3300031456 Ga0307513_10018577 Ga0307513_100185775 175
225 3300037471 Ga0395905_0145603 Ga0395905_0145603_421_987 175
226 3300047472 Ga0495686_0003418 Ga0495686_0003418_6487_7056 175
227 3300003775 Ga0055524_1000317 Ga0055524_100031736 176
228 3300005543 Ga0070672_100336543 Ga0070672_1003365432 176
229 3300006195 Ga0075366_10012379 Ga0075366_100123794 176
230 3300006195 Ga0075366_10118978 Ga0075366_101189782 176
231 3300009177 Ga0105248_10056750 Ga0105248_100567502 176
232 3300025304 Ga0209257_1000774 Ga0209257_100077422 176
233 3300025926 Ga0207659_10161332 Ga0207659_101613322 176
234 3300025931 Ga0207644_10160624 Ga0207644_101606242 176
235 3300025941 Ga0207711_10006659 Ga0207711_100066599 176
236 3300025960 Ga0207651_10862850 Ga0207651_108628502 176
237 3300026089 Ga0207648_10033989 Ga0207648_100339895 176
238 3300027312 Ga0209371_1007228 Ga0209371_10072283 176
239 3300030500 Ga0268256_1007318 Ga0268256_10073182 176
240 3300035691 Ga0373931_0014455 Ga0373931_0014455_327_899 176
241 3300036401 Ga0373937_0325909 Ga0373937_0325909_487_1056 176
242 3300037068 Ga0373925_0157276 Ga0373925_0157276_986_1558 176
243 3300044712 Ga0453684_0062252 Ga0453684_0062252_3869_4462 176
244 3300046691 Ga0495670_0017119 Ga0495670_0017119_1310_1921 176
245 3300048903 Ga0496100_0189109 Ga0496100_0189109_164_733 176
246 3300048915 Ga0496112_0029931 Ga0496112_0029931_466_1035 176
247 3300050493 nmdc:mga0k408_110738_c1 nmdc:mga0k408_110738_c1_422_961 176
248 3300050493 nmdc:mga0k408_194208_c1 nmdc:mga0k408_194208_c1_176_745 176
249 3300050493 nmdc:mga0k408_8309_c1 nmdc:mga0k408_8309_c1_746_1357 176
250 3300053093 Ga0500651_0048364 Ga0500651_0048364_1671_2246 176
251 3300053156 Ga0500622_0000552 Ga0500622_0000552_4905_5516 176
252 3300005367 Ga0070667_101565808 Ga0070667_1015658081 177
253 3300031507 Ga0307509_10004509 Ga0307509_100045093 177
254 3300046524 Ga0495648_0026255 Ga0495648_0026255_40_615 177
255 3300046660 Ga0495625_0080518 Ga0495625_0080518_32_607 177
256 3300053092 Ga0500583_0043354 Ga0500583_0043354_652_1227 177
257 3300003322 rootL2_10147086 rootL2_101470862 178
258 3300005456 Ga0070678_100106607 Ga0070678_1001066073 178
259 3300006038 Ga0075365_10643946 Ga0075365_106439461 178
260 3300006177 Ga0075362_10197575 Ga0075362_101975752 178
261 3300006178 Ga0075367_10140264 Ga0075367_101402642 178
262 3300006186 Ga0075369_10173737 Ga0075369_101737372 178
263 3300006195 Ga0075366_10000511 Ga0075366_100005113 178
264 3300006195 Ga0075366_10012389 Ga0075366_100123893 178
265 3300006195 Ga0075366_10014929 Ga0075366_100149293 178
266 3300006195 Ga0075366_10016715 Ga0075366_100167152 178
267 3300006353 Ga0075370_10000514 Ga0075370_100005143 178
268 3300006353 Ga0075370_10014058 Ga0075370_100140582 178
269 3300006353 Ga0075370_10038290 Ga0075370_100382903 178
270 3300013308 Ga0157375_10074999 Ga0157375_100749993 178
271 3300027876 Ga0209974_10008186 Ga0209974_100081862 178
272 3300046519 Ga0495632_0017604 Ga0495632_0017604_1818_2393 178
273 3300046660 Ga0495625_0447064 Ga0495625_0447064_212_787 178
274 3300048916 Ga0496113_0180015 Ga0496113_0180015_119_688 178
275 3300050492 nmdc:mga0yw44_597863_c1 nmdc:mga0yw44_597863_c1_52_594 178
276 3300050493 nmdc:mga0k408_13688_c1 nmdc:mga0k408_13688_c1_2167_2742 178
277 3300050494 nmdc:mga06z11_354347_c1 nmdc:mga06z11_354347_c1_226_801 178
278 3300050496 nmdc:mga07m45_3993_c1 nmdc:mga07m45_3993_c1_6310_6885 178
279 3300050516 nmdc:mga0sz30_18578_c1 nmdc:mga0sz30_18578_c1_2150_2725 178
280 3300050516 nmdc:mga0sz30_94122_c1 nmdc:mga0sz30_94122_c1_695_1267 178
281 3300005364 Ga0070673_100015711 Ga0070673_1000157112 179
282 3300005467 Ga0070706_100329915 Ga0070706_1003299152 179
283 3300005843 Ga0068860_100102709 Ga0068860_1001027091 179
284 3300028381 Ga0268264_10030739 Ga0268264_100307393 179
285 3300053111 Ga0500572_099770 Ga0500572_099770_271_828 179
286 3300053117 Ga0500593_001947 Ga0500593_001947_6470_7009 179
287 3300050496 nmdc:mga07m45_293_c1 nmdc:mga07m45_293_c1_15431_15991 180
288 3300041459 Ga0451800_1312607 Ga0451800_1312607_203_766 182
289 3300041486 Ga0451807_2452816 Ga0451807_2452816_70_633 182
290 3300027876 Ga0209974_10011629 Ga0209974_100116292 184
291 3300031616 Ga0307508_10000143 Ga0307508_1000014362 185
292 3300046694 Ga0495649_0098428 Ga0495649_0098428_423_1022 185
293 3300031730 Ga0307516_10001817 Ga0307516_100018173 186
294 3300002705 JGI25156J39149_1011615 JGI25156J39149_10116152 188
295 3300005327 Ga0070658_10150569 Ga0070658_101505692 188
296 3300005339 Ga0070660_100006480 Ga0070660_1000064806 188
297 3300005366 Ga0070659_100018642 Ga0070659_1000186425 188
298 3300025256 Ga0209759_1001901 Ga0209759_10019016 188
299 3300025909 Ga0207705_10632259 Ga0207705_106322592 188
300 3300025919 Ga0207657_10019672 Ga0207657_100196725 188
301 3300025949 Ga0207667_10218492 Ga0207667_102184922 188
302 3300002704 JGI25155J39150_1000024 JGI25155J39150_1000024110 213
303 3300002705 JGI25156J39149_1000005 JGI25156J39149_1000005144 213
304 3300002738 JGI25154J39366_1000017 JGI25154J39366_1000017136 213
305 3300002741 JGI25157J39369_1000003 JGI25157J39369_1000003152 213
306 3300002774 JGI25150J39212_1005003 JGI25150J39212_10050032 213
307 3300002987 JGI25159J45721_1001965 JGI25159J45721_10019653 213
308 3300003187 JGI25151J46595_10003242 JGI25151J46595_100032424 213
309 3300003187 JGI25151J46595_10004391 JGI25151J46595_100043917 213
310 3300003771 Ga0055526_1001575 Ga0055526_10015758 213
311 3300003771 Ga0055526_1005206 Ga0055526_10052064 213
312 3300003773 Ga0055537_1001319 Ga0055537_10013196 213
313 3300003775 Ga0055524_1000073 Ga0055524_100007319 213
314 3300003781 Ga0055536_1004311 Ga0055536_10043116 213
315 3300003784 Ga0055534_1000714 Ga0055534_10007145 213
316 3300003790 Ga0055528_1007563 Ga0055528_10075633 213
317 3300003791 Ga0055530_10001983 Ga0055530_100019836 213
318 3300003792 Ga0055540_1000037 Ga0055540_100003731 213
319 3300003794 Ga0055531_10001381 Ga0055531_1000138112 213
320 3300005262 Ga0065165_1006773 Ga0065165_10067732 213
321 3300025206 Ga0209435_100002 Ga0209435_100002260 213
322 3300025245 Ga0207425_1000513 Ga0207425_100051315 213
323 3300025246 Ga0209646_1000001 Ga0209646_10000012403 213
324 3300025250 Ga0209026_1000001 Ga0209026_10000011060 213
325 3300025256 Ga0209759_1000001 Ga0209759_10000012034 213
326 3300025263 Ga0209565_1000128 Ga0209565_100012829 213
327 3300025273 Ga0209673_1000008 Ga0209673_100000852 213
328 3300025284 Ga0209130_1000338 Ga0209130_100033841 213
329 3300025291 Ga0209675_1000099 Ga0209675_100009944 213
330 3300025292 Ga0209676_1000023 Ga0209676_1000023382 213
331 3300025294 Ga0209025_1003851 Ga0209025_100385110 213
332 3300025294 Ga0209025_1013957 Ga0209025_10139573 213
333 3300025295 Ga0209564_1000543 Ga0209564_100054340 213
334 3300025295 Ga0209564_1001126 Ga0209564_100112611 213
335 3300025297 Ga0209758_1018620 Ga0209758_10186203 213
336 3300025298 Ga0209050_1000022 Ga0209050_1000022364 213
337 3300025299 Ga0209256_1000001 Ga0209256_10000011850 213
338 3300025302 Ga0207426_1003322 Ga0207426_10033224 213
339 3300025303 Ga0209051_1000013 Ga0209051_1000013364 213
340 3300025304 Ga0209257_1000042 Ga0209257_1000042123 213
341 3300031548 Ga0307408_100022284 Ga0307408_1000222841 213
342 3300031901 Ga0307406_10262481 Ga0307406_102624812 213

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01202

SKI

Shikimate kinase

11

173

0.93

PF13207

AAA_17

AAA domain

8

127

0.82

PF13238

AAA_18

AAA domain

6

130

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u8a-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis shikimate kinase in complex with shikimate and adp at 2.15 angstrom resolution 0.966 42 203
2dft-assembly1.cif.gz_A structure of shikimate kinase from mycobacterium tuberculosis complexed with adp and mg at 2.8 angstrons of resolution 0.9606 42 203
1kag-assembly2.cif.gz_B crystal structure of the escherichia coli shikimate kinase i (arok) 0.958 40 204
2iyz-assembly1.cif.gz_A shikimate kinase from mycobacterium tuberculosis in complex with shikimate-3-phosphate and adp 0.9468 42 212
1shk-assembly2.cif.gz_B the three-dimensional structure of shikimate kinase from erwinia chrysanthemi 0.9429 41 206
ID Description Score Start End Superfamily
af_I1JY85_1_186_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9268 49 208 3.40.50.300
2shkA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9267 40 206 3.40.50.300
3n2eC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9266 40 210 3.40.50.300
4y0aA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9259 39 211 3.40.50.300
1kagA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9153 38 204 3.40.50.300
ID Description Score Start End GO Terms
AF-A2SKH2-F1-model_v4 Shikimate kinase (SK) (EC 2.7.1.71) 0.9936 40 211 GO:0000287
GO:0004765
GO:0005524
GO:0005829
GO:0008652
GO:0009073
GO:0009423
AF-J2JY20-F1-model_v4 Shikimate kinase (SK) (EC 2.7.1.71) 0.9909 56 210 GO:0000287
GO:0004765
GO:0005524
GO:0005829
GO:0008652
GO:0009073
GO:0009423
AF-U5N849-F1-model_v4 Shikimate kinase (SK) (EC 2.7.1.71) 0.9871 42 203 GO:0000287
GO:0004765
GO:0005524
GO:0005829
GO:0008652
GO:0009073
GO:0009423
AF-A0A368C254-F1-model_v4 shikimate kinase (EC 2.7.1.71) 0.9817 41 129 GO:0004765
GO:0005524
GO:0005829
GO:0008652
GO:0009073
GO:0009423
AF-A0A841RNE0-F1-model_v4 deleted 0.9813 40 212

Feature Viewer

pLDDT pTM Quality
82.15 0.77 High
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Predicted Structure (AlphaFold2)

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