F413751

General Info

Members Datasets Scaffolds Average Seq Length
338 193 676 403

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2954002825|2954005410
Length 435
Sequence SDVPAHPRPATPRRVVVTGLGAITPLGVGVPALWLGLLEGRCGIRELTGEEFTGLPVRAAGTVPVDPAGLLPRPQARRMNRAAQFGVLAADEAWRDAGFDGSGTEASGLAPERVGVSVGAILGDASVLVGGDRRLREKGPRAVSPLTTPMTVPSQAASQISLALRITGEARTVTSACASGTEAIGQAIDRIRYGHVDVVLAGGAEAVVTPAIMASFAAMRALSTRPAGELPSRPFARDRDGFVNGEGAGFLLLESEEHARARGARLYCEAAGWGLSADAHHMAAPDPSGTGVALALRRALRDAGARPADVIHVNAHATATIDGDLAEANALRTVLGTPGTPRVPVTALKGHLGHLQGAAGGVEAVATVLTLHHGTIPPTIGCAEGEQDEAIDLDVVRGAPRPLPGHGDLALSNSFGFGGHNAVLALRRVGQEAGS

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
29 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
50 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
51 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
82 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
88 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
89 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
90 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
91 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
92 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
93 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
94 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
95 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
96 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
97 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
101 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
102 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
103 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
104 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
105 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
106 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
107 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
110 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
111 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
112 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
113 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
114 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
115 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
118 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
119 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
150 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
151 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
167 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
168 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
169 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
170 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
171 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
174 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
175 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
176 2643221572 Leifsonia sp. Root60 Isolate Unclassified
177 2643221613 Oerskovia sp. Root22 Isolate Unclassified
178 2643221616 Leifsonia sp. Root227 Isolate Unclassified
179 2643221649 Leifsonia sp. Root4 Isolate Unclassified
180 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
181 2643221721 Oerskovia sp. Root918 Isolate Unclassified
182 2808606372 Agromyces sp. 23-23 Isolate Unclassified
183 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
184 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
185 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
186 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
187 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
188 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
189 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
190 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
191 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
192 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
193 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.08
Metatranscriptomes 0
Isolates 5.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.07
Nodule 0.3
Rhizoplane 2.66
Rhizosphere 90.83
Stem 0
Stem Tuber 0.3
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000276 3300002459 Bacteria 19919
2 JGI25164J39214_1001094 3300002772 Bacteria 7828
3 JGI25406J46586_10015685 3300003203 Bacteria 3187
4 JGI25165J46597_1000002 3300003214 Bacteria 765387
5 Ga0065714_10006155 3300005288 Bacteria 3439
6 Ga0065714_10076653 3300005288 Bacteria 2769
7 Ga0070683_100051066 3300005329 Bacteria 3829
8 Ga0070670_100010819 3300005331 Bacteria 7792
9 Ga0070680_100111680 3300005336 Bacteria 2275
10 Ga0070691_10011829 3300005341 Bacteria 3993
11 Ga0070668_100119145 3300005347 Bacteria 2108
12 Ga0070662_100034882 3300005457 Bacteria 3550
13 Ga0070681_10034653 3300005458 Bacteria 5069
14 Ga0070681_10071511 3300005458 Bacteria 3434
15 Ga0070698_100021662 3300005471 Bacteria 6728
16 Ga0070698_100029397 3300005471 Bacteria 5705
17 Ga0070699_100079954 3300005518 Bacteria 2849
18 Ga0070679_100024756 3300005530 Bacteria 5883
19 Ga0070679_100060715 3300005530 Bacteria 3767
20 Ga0070679_100261654 3300005530 Bacteria 1685
21 Ga0070684_100001295 3300005535 Bacteria 17936
22 Ga0070686_100070266 3300005544 Bacteria 2289
23 Ga0070664_100000251 3300005564 Bacteria 38725
24 Ga0070702_100072299 3300005615 Bacteria 2041
25 Ga0068864_100019796 3300005618 Bacteria 5627
26 Ga0068861_100033693 3300005719 Bacteria 3781
27 Ga0068870_10003692 3300005840 Bacteria 6508
28 Ga0068870_10108152 3300005840 Bacteria 1583
29 Ga0068863_100002532 3300005841 Bacteria 18129
30 Ga0068863_100141579 3300005841 Bacteria 2299
31 Ga0081455_10002698 3300005937 Bacteria 20954
32 Ga0081455_10007834 3300005937 Bacteria 11186
33 Ga0081455_10015628 3300005937 Bacteria 7364
34 Ga0081455_10025042 3300005937 Bacteria 5514
35 Ga0081538_10000636 3300005981 Bacteria 38924
36 Ga0081538_10008863 3300005981 Bacteria 8464
37 Ga0081538_10015192 3300005981 Bacteria 5976
38 Ga0081538_10029314 3300005981 Bacteria 3763
39 Ga0081538_10038824 3300005981 Bacteria 3064
40 Ga0081540_1024652 3300005983 Bacteria 3485
41 Ga0081539_10002045 3300005985 Bacteria 30322
42 Ga0081539_10007713 3300005985 Bacteria 9657
43 Ga0081539_10015904 3300005985 Bacteria 5423
44 Ga0075432_10009949 3300006058 Bacteria 3232
45 Ga0075427_10001544 3300006194 Bacteria 2971
46 Ga0075428_100053944 3300006844 Bacteria 4405
47 Ga0075430_100001327 3300006846 Bacteria 19975
48 Ga0075430_100004149 3300006846 Bacteria 12223
49 Ga0075431_100001179 3300006847 Bacteria 23567
50 Ga0075431_100096022 3300006847 Bacteria 3060
51 Ga0075433_10021066 3300006852 Bacteria 5461
52 Ga0075434_100170913 3300006871 Bacteria 2194
53 Ga0075429_100008544 3300006880 Bacteria 8908
54 Ga0075429_100023636 3300006880 Bacteria 5333
55 Ga0105251_10008378 3300009011 Bacteria 6232
56 Ga0111539_10008362 3300009094 Bacteria 13166
57 Ga0111539_10324638 3300009094 Bacteria 1791
58 Ga0114129_10003922 3300009147 Bacteria 20998
59 Ga0114129_10031369 3300009147 Bacteria 7513
60 Ga0114129_10152369 3300009147 Bacteria 3163
61 Ga0105243_10030944 3300009148 Bacteria 4124
62 Ga0105243_10053211 3300009148 Bacteria 3210
63 Ga0105242_10015157 3300009176 Bacteria 5985
64 Ga0105249_10019055 3300009553 Bacteria 6120
65 Ga0105246_10062938 3300011119 Bacteria 2586
66 Ga0157369_10001845 3300013105 Bacteria 25607
67 Ga0163162_10075708 3300013306 Bacteria 3426
68 Ga0157375_10129014 3300013308 Bacteria 2647
69 Ga0163163_10049836 3300014325 Bacteria 4122
70 Ga0163163_10101609 3300014325 Bacteria 2897
71 Ga0157380_10009134 3300014326 Bacteria 7089
72 Ga0157379_10225423 3300014968 Bacteria 1699
73 Ga0182005_1015228 3300015265 Bacteria 2147
74 Ga0207427_100052 3300025231 Bacteria 218228
75 Ga0209437_100816 3300025233 Bacteria 13979
76 Ga0209233_1000001 3300025261 Bacteria 2992747
77 Ga0207643_10000539 3300025908 Bacteria 24326
78 Ga0207705_10071370 3300025909 Bacteria 2518
79 Ga0207650_10003022 3300025925 Bacteria 11591
80 Ga0207659_10034670 3300025926 Bacteria 3482
81 Ga0207659_10058084 3300025926 Bacteria 2776
82 Ga0207706_10016392 3300025933 Bacteria 6691
83 Ga0207686_10005424 3300025934 Bacteria 6843
84 Ga0207668_10128843 3300025972 Bacteria 1929
85 Ga0207678_10014801 3300026067 Bacteria 6863
86 Ga0207641_10155415 3300026088 Bacteria 2075
87 Ga0207648_10195848 3300026089 Bacteria 1792
88 Ga0207676_10005083 3300026095 Bacteria 9305
89 Ga0207674_10003997 3300026116 Bacteria 17913
90 Ga0207675_100001086 3300026118 Bacteria 26939
91 Ga0207683_10284174 3300026121 Bacteria 1512
92 Ga0207683_10324940 3300026121 Bacteria 1410
93 Ga0207428_10000623 3300027907 Bacteria 41755
94 Ga0207428_10123263 3300027907 Bacteria 1986
95 Ga0307515_10176000 3300028794 Bacteria 2110
96 Ga0265327_10000021 3300031251 Bacteria 417788
97 Ga0307513_10003140 3300031456 Bacteria 22565
98 Ga0307408_100006367 3300031548 Bacteria 7833
99 Ga0307408_100021574 3300031548 Bacteria 4361
100 Ga0307405_10007482 3300031731 Bacteria 5466
101 Ga0307405_10009818 3300031731 Bacteria 4923
102 Ga0307405_10038505 3300031731 Bacteria 2883
103 Ga0307405_10061089 3300031731 Bacteria 2380
104 Ga0307413_10016564 3300031824 Bacteria 3811
105 Ga0307413_10031393 3300031824 Bacteria 2998
106 Ga0307413_10117063 3300031824 Bacteria 1797
107 Ga0307410_10043879 3300031852 Bacteria 2966
108 Ga0307410_10193115 3300031852 Bacteria 1549
109 Ga0307406_10000739 3300031901 Bacteria 18316
110 Ga0307406_10018796 3300031901 Bacteria 4045
111 Ga0307406_10026446 3300031901 Bacteria 3485
112 Ga0307406_10038760 3300031901 Bacteria 2952
113 Ga0307407_10007832 3300031903 Bacteria 4863
114 Ga0307407_10008053 3300031903 Bacteria 4811
115 Ga0307409_100003517 3300031995 Bacteria 8535
116 Ga0307409_100013747 3300031995 Bacteria 5228
117 Ga0307409_100038288 3300031995 Bacteria 3545
118 Ga0307409_100056007 3300031995 Bacteria 3047
119 Ga0307409_100092120 3300031995 Bacteria 2486
120 Ga0307416_100045989 3300032002 Bacteria 3441
121 Ga0307416_100080287 3300032002 Bacteria 2752
122 Ga0307416_100235697 3300032002 Bacteria 1768
123 Ga0307414_10011134 3300032004 Bacteria 5261
124 Ga0307411_10005786 3300032005 Bacteria 6119
125 Ga0307415_100020275 3300032126 Bacteria 4056
126 Ga0307415_100032788 3300032126 Bacteria 3364
127 Ga0307415_100041736 3300032126 Bacteria 3048
128 Ga0307415_100045730 3300032126 Bacteria 2937
129 Ga0307415_100057909 3300032126 Bacteria 2665
130 Ga0373939_0015212 3300035114 Bacteria 2010
131 Ga0395899_0086712 3300037312 Bacteria 2273
132 Ga0395900_0102391 3300037418 Bacteria 2942
133 Ga0395905_0344592 3300037471 Bacteria 1381
134 Ga0395901_0147206 3300038443 Bacteria 2475
135 Ga0395901_0197966 3300038443 Bacteria 2106
136 Ga0439443_000537 3300042003 Bacteria 3452
137 Ga0439448_0009934 3300042005 Bacteria 2812
138 Ga0439449_0000667 3300042007 Bacteria 12998
139 Ga0439451_003021 3300042009 Bacteria 3420
140 Ga0439456_005556 3300042013 Bacteria 2560
141 Ga0439463_003649 3300042016 Bacteria 3880
142 Ga0439463_018852 3300042016 Bacteria 1718
143 Ga0450900_000680 3300042136 Bacteria 2860
144 Ga0439444_0002230 3300042437 Bacteria 2623
145 Ga0439464_0005514 3300042439 Bacteria 3275
146 Ga0439460_0001079 3300042461 Bacteria 6348
147 Ga0466963_0072075 3300044694 Bacteria 2326
148 Ga0466960_0071347 3300044901 Bacteria 1729
149 Ga0466959_0099064 3300045049 Bacteria 2088
150 Ga0495603_0052193 3300046455 Bacteria 2428
151 Ga0495584_0046661 3300046491 Bacteria 2185
152 Ga0495585_0032131 3300046492 Bacteria 2975
153 Ga0495594_0095917 3300046499 Bacteria 1666
154 Ga0495596_0060560 3300046500 Bacteria 1475
155 Ga0495644_0026821 3300046523 Bacteria 2184
156 Ga0495621_0025066 3300046539 Bacteria 2000
157 Ga0495621_0062593 3300046539 Bacteria 1354
158 Ga0495656_0003782 3300046615 Bacteria 5142
159 Ga0495656_0004930 3300046615 Bacteria 4594
160 Ga0495656_0035166 3300046615 Bacteria 2057
161 Ga0495634_0163410 3300046642 Bacteria 1402
162 Ga0495611_0059407 3300046648 Bacteria 1735
163 Ga0495635_0180412 3300046663 Bacteria 1435
164 Ga0495659_0017789 3300046664 Bacteria 2361
165 Ga0495657_0049460 3300046675 Bacteria 2831
166 Ga0495670_0102782 3300046691 Bacteria 1473
167 Ga0495600_0143209 3300046809 Bacteria 1550
168 Ga0495581_0001534 3300047315 Bacteria 12874
169 Ga0495676_0029233 3300047321 Bacteria 4694
170 Ga0495683_0000996 3300047323 Bacteria 19784
171 Ga0495677_0018442 3300047445 Bacteria 2530
172 Ga0495684_0067441 3300047471 Bacteria 2721
173 Ga0496100_0241887 3300048903 Bacteria 1332
174 Ga0496102_0204711 3300048905 Bacteria 1860
175 Ga0496104_0077244 3300048907 Bacteria 3173
176 Ga0496107_0126358 3300048910 Bacteria 1886
177 Ga0496109_0011618 3300048912 Bacteria 7572
178 Ga0496109_0173050 3300048912 Bacteria 2026
179 Ga0496110_0051090 3300048913 Bacteria 3632
180 Ga0496113_0105185 3300048916 Bacteria 2191
181 Ga0496115_0113901 3300048918 Bacteria 2222
182 Ga0496126_0055381 3300048929 Bacteria 3588
183 Ga0501031_0011044 3300049568 Bacteria 5885
184 Ga0501031_0037215 3300049568 Bacteria 3174
185 Ga0501031_0122794 3300049568 Bacteria 1696
186 Ga0501031_0137949 3300049568 Bacteria 1593
187 Ga0501033_0058497 3300049570 Bacteria 2847
188 Ga0501036_0000066 3300049572 Bacteria 67540
189 Ga0501036_0003110 3300049572 Bacteria 13240
190 Ga0501036_0004457 3300049572 Bacteria 11320
191 Ga0501036_0186325 3300049572 Bacteria 1746
192 Ga0501037_0020410 3300049573 Bacteria 4892
193 Ga0501037_0049887 3300049573 Bacteria 3064
194 Ga0501037_0057758 3300049573 Bacteria 2832
195 Ga0501038_0001948 3300049574 Bacteria 19050
196 Ga0501038_0004593 3300049574 Bacteria 12849
197 Ga0501039_0000380 3300049575 Bacteria 31802
198 Ga0501039_0008704 3300049575 Bacteria 7725
199 Ga0501039_0041828 3300049575 Bacteria 3540
200 Ga0501039_0165915 3300049575 Bacteria 1736
201 Ga0501040_0000333 3300049576 Bacteria 27706
202 Ga0501040_0002302 3300049576 Bacteria 12277
203 Ga0501040_0004165 3300049576 Bacteria 9414
204 Ga0501040_0049253 3300049576 Bacteria 2880
205 Ga0501040_0123222 3300049576 Bacteria 1820
206 Ga0501040_0139913 3300049576 Bacteria 1704
207 Ga0501040_0175678 3300049576 Bacteria 1517
208 Ga0501041_0000455 3300049577 Bacteria 20772
209 Ga0501041_0006597 3300049577 Bacteria 6797
210 Ga0501041_0023005 3300049577 Bacteria 3735
211 Ga0501041_0035228 3300049577 Bacteria 3033
212 Ga0501041_0082513 3300049577 Bacteria 1980
213 Ga0501042_0000010 3300049578 Bacteria 56837
214 Ga0501042_0005215 3300049578 Bacteria 8352
215 Ga0501042_0005868 3300049578 Bacteria 7937
216 Ga0501042_0051551 3300049578 Bacteria 2935
217 Ga0501043_0009732 3300049579 Bacteria 7535
218 Ga0501046_0000595 3300049580 Bacteria 35470
219 Ga0501046_0002764 3300049580 Bacteria 16333
220 Ga0501046_0021229 3300049580 Bacteria 5361
221 Ga0501046_0021725 3300049580 Bacteria 5294
222 Ga0501046_0036838 3300049580 Bacteria 3934
223 Ga0501047_0000018 3300049581 Bacteria 274180
224 Ga0501047_0238884 3300049581 Bacteria 1668
225 Ga0501048_0000213 3300049582 Bacteria 37962
226 Ga0501048_0000434 3300049582 Bacteria 29341
227 Ga0501048_0034951 3300049582 Bacteria 3621
228 Ga0501048_0039855 3300049582 Bacteria 3367
229 Ga0501048_0044861 3300049582 Bacteria 3159
230 Ga0501068_0025373 3300049584 Bacteria 3486
231 Ga0501069_0025127 3300049585 Bacteria 3254
232 Ga0501070_0277459 3300049586 Bacteria 1368
233 Ga0501071_0000486 3300049587 Bacteria 20083
234 Ga0501071_0004372 3300049587 Bacteria 8965
235 Ga0501071_0007751 3300049587 Bacteria 7080
236 Ga0501071_0024762 3300049587 Bacteria 4198
237 Ga0501072_0000303 3300049588 Bacteria 34901
238 Ga0501072_0003546 3300049588 Bacteria 11736
239 Ga0501072_0022505 3300049588 Bacteria 4888
240 Ga0501072_0046921 3300049588 Bacteria 3401
241 Ga0501072_0047389 3300049588 Bacteria 3385
242 Ga0501072_0153486 3300049588 Bacteria 1836
243 Ga0501073_0101553 3300049589 Bacteria 1997
244 Ga0501074_0000511 3300049590 Bacteria 23803
245 Ga0501074_0009839 3300049590 Bacteria 6945
246 Ga0501074_0016099 3300049590 Bacteria 5434
247 Ga0501075_0001825 3300049591 Bacteria 14039
248 Ga0501075_0002577 3300049591 Bacteria 12090
249 Ga0501075_0016264 3300049591 Bacteria 5356
250 Ga0501075_0154000 3300049591 Bacteria 1752
251 Ga0501076_0000264 3300049592 Bacteria 32410
252 Ga0501076_0000901 3300049592 Bacteria 19336
253 Ga0501076_0001695 3300049592 Bacteria 14876
254 Ga0501076_0004986 3300049592 Bacteria 9508
255 Ga0501076_0007555 3300049592 Bacteria 7913
256 Ga0501077_0003565 3300049593 Bacteria 9355
257 Ga0501077_0004855 3300049593 Bacteria 8168
258 Ga0501077_0005517 3300049593 Bacteria 7695
259 Ga0501077_0012851 3300049593 Bacteria 5246
260 Ga0501077_0050858 3300049593 Bacteria 2633
261 Ga0501079_0000139 3300049741 Bacteria 39676
262 Ga0501079_0002465 3300049741 Bacteria 13437
263 Ga0501079_0010048 3300049741 Bacteria 7185
264 Ga0501079_0038989 3300049741 Bacteria 3664
265 Ga0501079_0045206 3300049741 Bacteria 3398
266 Ga0501080_0003995 3300049742 Bacteria 13059
267 Ga0501080_0032333 3300049742 Bacteria 4879
268 Ga0501080_0035484 3300049742 Bacteria 4653
269 Ga0501080_0377770 3300049742 Bacteria 1277
270 Ga0501081_0000236 3300049743 Bacteria 28066
271 Ga0501081_0006002 3300049743 Bacteria 7863
272 Ga0501081_0007855 3300049743 Bacteria 6919
273 Ga0501081_0026922 3300049743 Bacteria 3879
274 Ga0501081_0146086 3300049743 Bacteria 1697
275 Ga0501083_0027426 3300049744 Bacteria 3930
276 Ga0501083_0076075 3300049744 Bacteria 2228
277 Ga0501035_0007586 3300049822 Bacteria 10136
278 Ga0501044_0297392 3300049823 Bacteria 1544
279 Ga0501045_0004543 3300049824 Bacteria 9587
280 Ga0501045_0011009 3300049824 Bacteria 6339
281 Ga0501045_0086371 3300049824 Bacteria 2315
282 Ga0501045_0157439 3300049824 Bacteria 1690
283 nmdc:mga05p37_4359_c1 3300050507 Bacteria 16515
284 nmdc:mga05p37_5316_c1 3300050507 Bacteria 15118
285 nmdc:mga09592_20491_c1 3300050508 Bacteria 5439
286 nmdc:mga09592_3079_c1 3300050508 Bacteria 13527
287 nmdc:mga0qj67_107663_c1 3300050509 Bacteria 2249
288 nmdc:mga0qj67_48967_c1 3300050509 Bacteria 3340
289 nmdc:mga06r32_36053_c1 3300050510 Bacteria 4671
290 nmdc:mga06r32_4824_c1 3300050510 Bacteria 12141
291 nmdc:mga08y16_24784_c1 3300050511 Bacteria 6331
292 nmdc:mga08y16_3343_c1 3300050511 Bacteria 16608
293 nmdc:mga0n895_155277_c1 3300050512 Bacteria 2319
294 nmdc:mga0a205_26369_c1 3300050515 Bacteria 5542
295 nmdc:mga0a205_3896_c1 3300050515 Bacteria 4178
296 Ga0500635_0000013 3300053080 Bacteria 133088
297 Ga0495655_0005977 3300053083 Bacteria 2184
298 Ga0500568_0000172 3300053139 Bacteria 56463
299 Ga0501084_0000795 3300054114 Bacteria 24132
300 Ga0501084_0001343 3300054114 Bacteria 19429
301 Ga0501084_0006485 3300054114 Bacteria 9622
302 Ga0501084_0021108 3300054114 Bacteria 5431
303 Ga0501084_0055334 3300054114 Bacteria 3319
304 Ga0501084_0163412 3300054114 Bacteria 1878
305 Ga0501084_0235063 3300054114 Bacteria 1547
306 Ga0590074_007316 3300059423 Bacteria 1834
307 Ga0590075_011745 3300059424 Bacteria 2121
308 Ga0501082_0000182 3300060353 Bacteria 54423
309 Ga0501082_0000935 3300060353 Bacteria 25818
310 Ga0501082_0017666 3300060353 Bacteria 6142
311 Ga0501082_0066151 3300060353 Bacteria 3112
312 Ga0501082_0097176 3300060353 Bacteria 2546
313 Ga0530510_0001168 3300061734 Bacteria 17443
314 Ga0530510_0008875 3300061734 Bacteria 7036
315 Ga0530510_0034498 3300061734 Bacteria 3645
316 Ga0530510_0051127 3300061734 Bacteria 2985
317 Ga0530510_0150986 3300061734 Bacteria 1715
318 Ga0530510_0172571 3300061734 Bacteria 1602
319 2954005410 2954002825 Bacteria 9173742
320 2587862629 2585428094 Bacteria 3604039
321 2643875393 2643221572 Bacteria 3614809
322 2644083419 2643221613 Bacteria 4622396
323 2644095992 2643221616 Bacteria 4066575
324 2644279510 2643221649 Bacteria 3867359
325 2644382448 2643221669 Bacteria 3611286
326 2644666296 2643221721 Bacteria 4486924
327 2808902266 2808606372 Bacteria 4649509
328 2839988691 2839986021 Bacteria 3685650
329 2863408558 2863404153 Bacteria 9672205
330 2883577721 2883577096 Bacteria 4709178
331 2884765352 2884763398 Bacteria 4091164
332 2895661485 2895660088 Bacteria 3782833
333 2919446052 2919443155 Bacteria 4072969
334 2932433968 2932431166 Bacteria 4215299
335 2935891113 2935890801 Bacteria 4593001
336 2990064094 2990059506 Bacteria 9321252
337 8008562746 8008558824 Bacteria 10610750
338 8046356263 8046352972 Bacteria 3613806
339 JGI24751J29686_10000276
340 JGI25164J39214_1001094
341 JGI25406J46586_10015685
342 JGI25165J46597_1000002
343 Ga0065714_10006155
344 Ga0065714_10076653
345 Ga0070683_100051066
346 Ga0070670_100010819
347 Ga0070680_100111680
348 Ga0070691_10011829
349 Ga0070668_100119145
350 Ga0070662_100034882
351 Ga0070681_10034653
352 Ga0070681_10071511
353 Ga0070698_100021662
354 Ga0070698_100029397
355 Ga0070699_100079954
356 Ga0070679_100024756
357 Ga0070679_100060715
358 Ga0070679_100261654
359 Ga0070684_100001295
360 Ga0070686_100070266
361 Ga0070664_100000251
362 Ga0070702_100072299
363 Ga0068864_100019796
364 Ga0068861_100033693
365 Ga0068870_10003692
366 Ga0068870_10108152
367 Ga0068863_100002532
368 Ga0068863_100141579
369 Ga0081455_10002698
370 Ga0081455_10007834
371 Ga0081455_10015628
372 Ga0081455_10025042
373 Ga0081538_10000636
374 Ga0081538_10008863
375 Ga0081538_10015192
376 Ga0081538_10029314
377 Ga0081538_10038824
378 Ga0081540_1024652
379 Ga0081539_10002045
380 Ga0081539_10007713
381 Ga0081539_10015904
382 Ga0075432_10009949
383 Ga0075427_10001544
384 Ga0075428_100053944
385 Ga0075430_100001327
386 Ga0075430_100004149
387 Ga0075431_100001179
388 Ga0075431_100096022
389 Ga0075433_10021066
390 Ga0075434_100170913
391 Ga0075429_100008544
392 Ga0075429_100023636
393 Ga0105251_10008378
394 Ga0111539_10008362
395 Ga0111539_10324638
396 Ga0114129_10003922
397 Ga0114129_10031369
398 Ga0114129_10152369
399 Ga0105243_10030944
400 Ga0105243_10053211
401 Ga0105242_10015157
402 Ga0105249_10019055
403 Ga0105246_10062938
404 Ga0157369_10001845
405 Ga0163162_10075708
406 Ga0157375_10129014
407 Ga0163163_10049836
408 Ga0163163_10101609
409 Ga0157380_10009134
410 Ga0157379_10225423
411 Ga0182005_1015228
412 Ga0207427_100052
413 Ga0209437_100816
414 Ga0209233_1000001
415 Ga0207643_10000539
416 Ga0207705_10071370
417 Ga0207650_10003022
418 Ga0207659_10034670
419 Ga0207659_10058084
420 Ga0207706_10016392
421 Ga0207686_10005424
422 Ga0207668_10128843
423 Ga0207678_10014801
424 Ga0207641_10155415
425 Ga0207648_10195848
426 Ga0207676_10005083
427 Ga0207674_10003997
428 Ga0207675_100001086
429 Ga0207683_10284174
430 Ga0207683_10324940
431 Ga0207428_10000623
432 Ga0207428_10123263
433 Ga0307515_10176000
434 Ga0265327_10000021
435 Ga0307513_10003140
436 Ga0307408_100006367
437 Ga0307408_100021574
438 Ga0307405_10007482
439 Ga0307405_10009818
440 Ga0307405_10038505
441 Ga0307405_10061089
442 Ga0307413_10016564
443 Ga0307413_10031393
444 Ga0307413_10117063
445 Ga0307410_10043879
446 Ga0307410_10193115
447 Ga0307406_10000739
448 Ga0307406_10018796
449 Ga0307406_10026446
450 Ga0307406_10038760
451 Ga0307407_10007832
452 Ga0307407_10008053
453 Ga0307409_100003517
454 Ga0307409_100013747
455 Ga0307409_100038288
456 Ga0307409_100056007
457 Ga0307409_100092120
458 Ga0307416_100045989
459 Ga0307416_100080287
460 Ga0307416_100235697
461 Ga0307414_10011134
462 Ga0307411_10005786
463 Ga0307415_100020275
464 Ga0307415_100032788
465 Ga0307415_100041736
466 Ga0307415_100045730
467 Ga0307415_100057909
468 Ga0373939_0015212
469 Ga0395899_0086712
470 Ga0395900_0102391
471 Ga0395905_0344592
472 Ga0395901_0147206
473 Ga0395901_0197966
474 Ga0439443_000537
475 Ga0439448_0009934
476 Ga0439449_0000667
477 Ga0439451_003021
478 Ga0439456_005556
479 Ga0439463_003649
480 Ga0439463_018852
481 Ga0450900_000680
482 Ga0439444_0002230
483 Ga0439464_0005514
484 Ga0439460_0001079
485 Ga0466963_0072075
486 Ga0466960_0071347
487 Ga0466959_0099064
488 Ga0495603_0052193
489 Ga0495584_0046661
490 Ga0495585_0032131
491 Ga0495594_0095917
492 Ga0495596_0060560
493 Ga0495644_0026821
494 Ga0495621_0025066
495 Ga0495621_0062593
496 Ga0495656_0003782
497 Ga0495656_0004930
498 Ga0495656_0035166
499 Ga0495634_0163410
500 Ga0495611_0059407
501 Ga0495635_0180412
502 Ga0495659_0017789
503 Ga0495657_0049460
504 Ga0495670_0102782
505 Ga0495600_0143209
506 Ga0495581_0001534
507 Ga0495676_0029233
508 Ga0495683_0000996
509 Ga0495677_0018442
510 Ga0495684_0067441
511 Ga0496100_0241887
512 Ga0496102_0204711
513 Ga0496104_0077244
514 Ga0496107_0126358
515 Ga0496109_0011618
516 Ga0496109_0173050
517 Ga0496110_0051090
518 Ga0496113_0105185
519 Ga0496115_0113901
520 Ga0496126_0055381
521 Ga0501031_0011044
522 Ga0501031_0037215
523 Ga0501031_0122794
524 Ga0501031_0137949
525 Ga0501033_0058497
526 Ga0501036_0000066
527 Ga0501036_0003110
528 Ga0501036_0004457
529 Ga0501036_0186325
530 Ga0501037_0020410
531 Ga0501037_0049887
532 Ga0501037_0057758
533 Ga0501038_0001948
534 Ga0501038_0004593
535 Ga0501039_0000380
536 Ga0501039_0008704
537 Ga0501039_0041828
538 Ga0501039_0165915
539 Ga0501040_0000333
540 Ga0501040_0002302
541 Ga0501040_0004165
542 Ga0501040_0049253
543 Ga0501040_0123222
544 Ga0501040_0139913
545 Ga0501040_0175678
546 Ga0501041_0000455
547 Ga0501041_0006597
548 Ga0501041_0023005
549 Ga0501041_0035228
550 Ga0501041_0082513
551 Ga0501042_0000010
552 Ga0501042_0005215
553 Ga0501042_0005868
554 Ga0501042_0051551
555 Ga0501043_0009732
556 Ga0501046_0000595
557 Ga0501046_0002764
558 Ga0501046_0021229
559 Ga0501046_0021725
560 Ga0501046_0036838
561 Ga0501047_0000018
562 Ga0501047_0238884
563 Ga0501048_0000213
564 Ga0501048_0000434
565 Ga0501048_0034951
566 Ga0501048_0039855
567 Ga0501048_0044861
568 Ga0501068_0025373
569 Ga0501069_0025127
570 Ga0501070_0277459
571 Ga0501071_0000486
572 Ga0501071_0004372
573 Ga0501071_0007751
574 Ga0501071_0024762
575 Ga0501072_0000303
576 Ga0501072_0003546
577 Ga0501072_0022505
578 Ga0501072_0046921
579 Ga0501072_0047389
580 Ga0501072_0153486
581 Ga0501073_0101553
582 Ga0501074_0000511
583 Ga0501074_0009839
584 Ga0501074_0016099
585 Ga0501075_0001825
586 Ga0501075_0002577
587 Ga0501075_0016264
588 Ga0501075_0154000
589 Ga0501076_0000264
590 Ga0501076_0000901
591 Ga0501076_0001695
592 Ga0501076_0004986
593 Ga0501076_0007555
594 Ga0501077_0003565
595 Ga0501077_0004855
596 Ga0501077_0005517
597 Ga0501077_0012851
598 Ga0501077_0050858
599 Ga0501079_0000139
600 Ga0501079_0002465
601 Ga0501079_0010048
602 Ga0501079_0038989
603 Ga0501079_0045206
604 Ga0501080_0003995
605 Ga0501080_0032333
606 Ga0501080_0035484
607 Ga0501080_0377770
608 Ga0501081_0000236
609 Ga0501081_0006002
610 Ga0501081_0007855
611 Ga0501081_0026922
612 Ga0501081_0146086
613 Ga0501083_0027426
614 Ga0501083_0076075
615 Ga0501035_0007586
616 Ga0501044_0297392
617 Ga0501045_0004543
618 Ga0501045_0011009
619 Ga0501045_0086371
620 Ga0501045_0157439
621 nmdc:mga05p37_4359_c1
622 nmdc:mga05p37_5316_c1
623 nmdc:mga09592_20491_c1
624 nmdc:mga09592_3079_c1
625 nmdc:mga0qj67_107663_c1
626 nmdc:mga0qj67_48967_c1
627 nmdc:mga06r32_36053_c1
628 nmdc:mga06r32_4824_c1
629 nmdc:mga08y16_24784_c1
630 nmdc:mga08y16_3343_c1
631 nmdc:mga0n895_155277_c1
632 nmdc:mga0a205_26369_c1
633 nmdc:mga0a205_3896_c1
634 Ga0500635_0000013
635 Ga0495655_0005977
636 Ga0500568_0000172
637 Ga0501084_0000795
638 Ga0501084_0001343
639 Ga0501084_0006485
640 Ga0501084_0021108
641 Ga0501084_0055334
642 Ga0501084_0163412
643 Ga0501084_0235063
644 Ga0590074_007316
645 Ga0590075_011745
646 Ga0501082_0000182
647 Ga0501082_0000935
648 Ga0501082_0017666
649 Ga0501082_0066151
650 Ga0501082_0097176
651 Ga0530510_0001168
652 Ga0530510_0008875
653 Ga0530510_0034498
654 Ga0530510_0051127
655 Ga0530510_0150986
656 Ga0530510_0172571
657 2954005410
658 2587862629
659 2643875393
660 2644083419
661 2644095992
662 2644279510
663 2644382448
664 2644666296
665 2808902266
666 2839988691
667 2863408558
668 2883577721
669 2884765352
670 2895661485
671 2919446052
672 2932433968
673 2935891113
674 2990064094
675 8008562746
676 8046356263

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02801

Ketoacyl-synt_C

Beta-ketoacyl synthase, C-terminal domain

267

383

0.96

PF00109

ketoacyl-synt

Beta-ketoacyl synthase, N-terminal domain

12

259

0.89

PF00108

Thiolase_N

Thiolase, N-terminal domain

147

227

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ls5-assembly1.cif.gz_B crystal structure of beta-ketoacyl-acp synthase ii (fabf) from bacillus subtilis 0.9848 2 410
1e5m-assembly1.cif.gz_A-2 beta ketoacyl acyl carrier protein synthase ii (kasii) from synechocystis sp. 0.9846 3 410
4r8e-assembly1.cif.gz_B crystal structure of beta-ketoacyl-acp synthase ii (fabf) from yersinia pestis 0.9835 3 409
5sxo-assembly1.cif.gz_A-2 1.35 angstrom resolution crystal structure of beta-ketoacyl-acp synthase ii (fabf) from listeria monocytogenes 0.9831 3 409
3o04-assembly1.cif.gz_A crystal structure of the beta-keto-acyl carrier protein synthase ii (lmo2201) from listeria monocytogenes 0.9825 2 410
ID Description Score Start End Superfamily
1j3nB02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9872 260 403 3.40.47.10
af_C6KT99_32_472_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9827 2 410 3.40.47.10
1tqyG02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9817 256 409 3.40.47.10
af_P0AAI5_1_413_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9808 3 409 3.40.47.10
4ls7B01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9801 2 251 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A6P1YE22-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) 0.9909 1 410 GO:0004315
GO:0005829
GO:0006633
AF-A0A7X9KTZ6-F1-model_v4 deleted 0.9909 238 409
AF-A0A847PZ14-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) 0.9906 1 409 GO:0004315
GO:0005829
GO:0006633
AF-A0A6V8SGV4-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC 2.3.1.179) 0.9899 1 410 GO:0004315
GO:0005829
GO:0006633
AF-A0A7C4MQC6-F1-model_v4 Beta-ketoacyl-[acyl-carrier-protein] synthase II 0.9891 246 410 GO:0004315
GO:0005829
GO:0006633

Map