F413492

General Info

Members Datasets Scaffolds Average Seq Length
338 205 324 248

Family's Representative Sequence

Representative Sequence 3300009553|Ga0105249_10057782|Ga0105249_100577822
Length 268
Sequence MLEDSEPPPQNDPASGQRSCWSGEVAMRVLLVDDEDLALDRLQTFFGDIDGVEVVGKARDGDSALDAIERLRPDLVLFDIQMPGRNGLRAAADINVEPRPEVIFVTAHEHYAPDAFEVDAADYLLKPVRFDRLRQAVERARGELEEEVAALRSSGAAGLEDGGFWVPERHGQRRVPLEAIDWIEAARDYVLLHTDIRSHLLRITMAALEEKLAGSALLRVHRSAFVRPDRVTEVKRANRSMSLVLNDGATVQVGPSYMDSVKAALALD

Samples

Sample ID Description Type Environment
1 2010549000 Rice roots microbial communities from plants at IRRI, Los Banos, Philippines - endophytes Metagenome Endosphere
2 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
3 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
4 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
5 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
6 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
7 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
8 2643221640 Caulobacter sp. Root342 Isolate Unclassified
9 2643221642 Caulobacter sp. Root343 Isolate Unclassified
10 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
11 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
12 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
13 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
14 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
15 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
16 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
17 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
18 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
19 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
20 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
21 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
22 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
23 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
24 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
25 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
26 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
27 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
28 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
29 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
30 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
31 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
32 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
33 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
34 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
35 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
36 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
37 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
38 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
39 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
40 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
41 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
42 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
43 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
44 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
45 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
46 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
47 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
48 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
49 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
50 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
51 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
52 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
53 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
54 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
55 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
56 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
57 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
58 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
59 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
60 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
61 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
62 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
63 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
64 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
65 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
66 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
67 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
68 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
69 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
70 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
71 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
72 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
73 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
74 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
75 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
76 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
77 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
78 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
79 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
80 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
81 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
82 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
83 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
84 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
85 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
86 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
87 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
88 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
89 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
90 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
91 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
92 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
93 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
94 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
95 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
97 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
99 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
101 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
140 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
144 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
145 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
146 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
147 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
148 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
149 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
150 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
151 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
152 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
153 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
154 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
155 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
156 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
157 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
158 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
159 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
160 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
161 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
162 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
163 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
164 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
165 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
166 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
167 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
168 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
169 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
170 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
171 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
172 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
173 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
174 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
175 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
176 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
177 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
178 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
179 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
180 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
181 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
182 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
183 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
184 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
185 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
186 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
187 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
188 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
189 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
190 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
191 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
193 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
194 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
195 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
196 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
197 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
198 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
199 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
200 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
201 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
202 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
203 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
204 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
205 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.56
Metatranscriptomes 0.3
Isolates 4.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.86
Nodule 0.89
Rhizoplane 2.66
Rhizosphere 68.93
Stem 0
Stem Tuber 0
Unclassified 10.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 RicEn_FSXC52503_g1 2010549000 Bacteria 768
2 JGI24736J21556_1006721 3300001904 Bacteria 1935
3 JGI24741J21665_1026858 3300001915 Bacteria 875
4 JGI24752J21851_1000204 3300001976 Bacteria 8290
5 JGI24752J21851_1000998 3300001976 Bacteria 3867
6 JGI24740J21852_10010761 3300001979 Bacteria 3506
7 JGI24739J22299_10003311 3300001989 Bacteria 6142
8 JGI24739J22299_10043476 3300001989 Bacteria 1485
9 JGI24737J22298_10007449 3300001990 Bacteria 3696
10 JGI24735J21928_10024670 3300002067 Bacteria 1817
11 JGI24750J21931_1000342 3300002070 Bacteria 7911
12 JGI24748J21848_1000047 3300002074 Bacteria 57881
13 JGI24738J21930_10000723 3300002075 Bacteria 9514
14 JGI24738J21930_10005952 3300002075 Bacteria 2895
15 JGI24749J21850_1009247 3300002076 Bacteria 1377
16 JGI24034J26672_10000048 3300002239 Bacteria 56597
17 JGI24742J22300_10002715 3300002244 Bacteria 2845
18 rootH2_10022336 3300003320 Bacteria 5120
19 Ga0055526_1001613 3300003771 Bacteria 15830
20 Ga0055536_1000678 3300003781 Bacteria 22920
21 Ga0055536_1000767 3300003781 Bacteria 21385
22 Ga0055536_1007593 3300003781 Bacteria 4820
23 Ga0055536_1015161 3300003781 Bacteria 2656
24 Ga0055530_10000477 3300003791 Bacteria 34878
25 Ga0055530_10001413 3300003791 Bacteria 17642
26 Ga0055530_10002471 3300003791 Bacteria 11857
27 Ga0055530_10004063 3300003791 Bacteria 7839
28 Ga0055530_10006936 3300003791 Bacteria 4895
29 Ga0055540_1001582 3300003792 Bacteria 13283
30 Ga0055531_10001084 3300003794 Bacteria 21385
31 Ga0055531_10001670 3300003794 Bacteria 15972
32 Ga0055531_10004053 3300003794 Bacteria 9080
33 Ga0055531_10005079 3300003794 Bacteria 7784
34 Ga0055531_10047078 3300003794 Bacteria 1177
35 Ga0065165_1001142 3300005262 Bacteria 31092
36 Ga0065707_10082043 3300005295 Bacteria 23744
37 Ga0065707_10122235 3300005295 Bacteria 2092
38 Ga0070683_100187144 3300005329 Bacteria 1966
39 Ga0070683_100369873 3300005329 Bacteria 1365
40 Ga0070690_100000004 3300005330 Bacteria 144000
41 Ga0070690_100223495 3300005330 Bacteria 1320
42 Ga0070670_100000209 3300005331 Bacteria 54253
43 Ga0070677_10000056 3300005333 Bacteria 34868
44 Ga0070666_10000011 3300005335 Bacteria 261736
45 Ga0068868_100000030 3300005338 Bacteria 77589
46 Ga0070660_100000368 3300005339 Bacteria 30078
47 Ga0070660_100223599 3300005339 Bacteria 1530
48 Ga0070689_100013741 3300005340 Bacteria 5865
49 Ga0070668_100001117 3300005347 Bacteria 18924
50 Ga0070668_100028068 3300005347 Bacteria 4272
51 Ga0070668_100072415 3300005347 Bacteria 2685
52 Ga0070669_100000009 3300005353 Bacteria 224683
53 Ga0070669_100183296 3300005353 Bacteria 1639
54 Ga0070669_100408523 3300005353 Bacteria 1112
55 Ga0070675_100055213 3300005354 Bacteria 3269
56 Ga0070675_100457149 3300005354 Bacteria 1146
57 Ga0070671_100004688 3300005355 Bacteria 10852
58 Ga0070671_100247888 3300005355 Bacteria 1513
59 Ga0070659_100000058 3300005366 Bacteria 88306
60 Ga0070659_100019070 3300005366 Bacteria 5188
61 Ga0070667_100000127 3300005367 Bacteria 95853
62 Ga0070667_100007750 3300005367 Bacteria 8903
63 Ga0070700_100176324 3300005441 Bacteria 1484
64 Ga0070678_100350466 3300005456 Bacteria 1269
65 Ga0070662_100245128 3300005457 Bacteria 1438
66 Ga0070662_100328676 3300005457 Bacteria 1248
67 Ga0070681_10493941 3300005458 Bacteria 1137
68 Ga0070685_10000225 3300005466 Bacteria 37151
69 Ga0068853_100003534 3300005539 Bacteria 11957
70 Ga0068853_100082094 3300005539 Bacteria 2823
71 Ga0068853_100156835 3300005539 Bacteria 2051
72 Ga0070686_100000001 3300005544 Bacteria 515830
73 Ga0070686_100027569 3300005544 Bacteria 3438
74 Ga0070693_100159405 3300005547 Bacteria 1436
75 Ga0070665_100000004 3300005548 Bacteria 785500
76 Ga0070665_100000011 3300005548 Bacteria 525539
77 Ga0070665_100005919 3300005548 Bacteria 12529
78 Ga0068857_100086153 3300005577 Bacteria 2808
79 Ga0068854_100031378 3300005578 Bacteria 3692
80 Ga0068852_100103068 3300005616 Bacteria 2580
81 Ga0068859_100024926 3300005617 Bacteria 6004
82 Ga0068859_100041348 3300005617 Bacteria 4630
83 Ga0068864_100000062 3300005618 Bacteria 121206
84 Ga0068864_100107346 3300005618 Bacteria 2483
85 Ga0068861_100001151 3300005719 Bacteria 16469
86 Ga0068851_10010951 3300005834 Bacteria 4242
87 Ga0068863_100000001 3300005841 Bacteria 581116
88 Ga0068863_100000010 3300005841 Bacteria 237758
89 Ga0068863_100000064 3300005841 Bacteria 118153
90 Ga0068858_100008050 3300005842 Bacteria 10152
91 Ga0068860_100000030 3300005843 Bacteria 256364
92 Ga0068860_100003159 3300005843 Bacteria 17011
93 Ga0068860_100054142 3300005843 Bacteria 3814
94 Ga0068862_100000079 3300005844 Bacteria 113551
95 Ga0068862_100000421 3300005844 Bacteria 45988
96 Ga0068862_100003649 3300005844 Bacteria 13169
97 Ga0081455_10000212 3300005937 Bacteria 74448
98 Ga0075369_10002167 3300006186 Bacteria 6940
99 Ga0075366_10011158 3300006195 Bacteria 5066
100 Ga0097620_100024926 3300006931 Bacteria 6004
101 Ga0097620_100041350 3300006931 Bacteria 4630
102 Ga0079104_1005474 3300006946 Bacteria 5063
103 Ga0079104_1007441 3300006946 Bacteria 3971
104 Ga0105251_10000625 3300009011 Bacteria 32540
105 Ga0105240_10008703 3300009093 Bacteria 14482
106 Ga0105245_10180120 3300009098 Bacteria 2018
107 Ga0105245_10305556 3300009098 Bacteria 1562
108 Ga0105247_10007723 3300009101 Bacteria 6581
109 Ga0105248_10000014 3300009177 Bacteria 324729
110 Ga0105248_10381877 3300009177 Bacteria 1586
111 Ga0105237_10000626 3300009545 Bacteria 49404
112 Ga0105237_10246475 3300009545 Bacteria 1788
113 Ga0105238_10086377 3300009551 Bacteria 3125
114 Ga0105238_10099369 3300009551 Bacteria 2893
115 Ga0105249_10000016 3300009553 Bacteria 278643
116 Ga0105249_10000907 3300009553 Bacteria 26174
117 Ga0105249_10057782 3300009553 Bacteria 3555
118 Ga0105239_10000438 3300010375 Bacteria 60788
119 Ga0157373_10057619 3300013100 Bacteria 2755
120 Ga0157370_10031308 3300013104 Bacteria 5206
121 Ga0157378_10041639 3300013297 Bacteria 4075
122 Ga0163162_10014953 3300013306 Bacteria 7579
123 Ga0157372_10353963 3300013307 Bacteria 1711
124 Ga0157380_10001834 3300014326 Bacteria 14037
125 Ga0157380_10003092 3300014326 Bacteria 11348
126 Ga0157379_10006196 3300014968 Bacteria 10302
127 Ga0157379_10033907 3300014968 Bacteria 4552
128 Ga0163161_10000044 3300017792 Bacteria 132739
129 Ga0206356_10246873 3300020070 Bacteria 2576
130 Ga0213876_10002175 3300021384 Bacteria 11579
131 Ga0207672_1001669 3300025223 Bacteria 1574
132 Ga0209026_1000750 3300025250 Bacteria 18442
133 Ga0209676_1000207 3300025292 Bacteria 130882
134 Ga0209676_1000233 3300025292 Bacteria 120247
135 Ga0209676_1004203 3300025292 Bacteria 8155
136 Ga0209676_1005805 3300025292 Bacteria 6311
137 Ga0209676_1016559 3300025292 Bacteria 2653
138 Ga0209025_1024091 3300025294 Bacteria 3156
139 Ga0209564_1002693 3300025295 Bacteria 13429
140 Ga0209564_1012710 3300025295 Bacteria 3645
141 Ga0209758_1006744 3300025297 Bacteria 8076
142 Ga0209758_1020158 3300025297 Bacteria 3172
143 Ga0209050_1000005 3300025298 Bacteria 1557793
144 Ga0209050_1000056 3300025298 Bacteria 338703
145 Ga0209050_1000073 3300025298 Bacteria 292046
146 Ga0209050_1000622 3300025298 Bacteria 55613
147 Ga0209050_1000624 3300025298 Bacteria 55344
148 Ga0209050_1004683 3300025298 Bacteria 9087
149 Ga0209256_1019772 3300025299 Bacteria 2129
150 Ga0209051_1000152 3300025303 Bacteria 131355
151 Ga0209051_1003749 3300025303 Bacteria 9771
152 Ga0209257_1000265 3300025304 Bacteria 120247
153 Ga0209257_1000772 3300025304 Bacteria 47390
154 Ga0209257_1001052 3300025304 Bacteria 36631
155 Ga0209257_1001156 3300025304 Bacteria 33557
156 Ga0209257_1003117 3300025304 Bacteria 14827
157 Ga0207656_10031058 3300025321 Bacteria 2210
158 Ga0207713_1004428 3300025735 Bacteria 9106
159 Ga0207682_10000368 3300025893 Bacteria 20749
160 Ga0207680_10000008 3300025903 Bacteria 518177
161 Ga0207645_10145838 3300025907 Bacteria 1543
162 Ga0207705_10065282 3300025909 Bacteria 2631
163 Ga0207654_10003073 3300025911 Bacteria 8456
164 Ga0207695_10007894 3300025913 Bacteria 13430
165 Ga0207695_10009319 3300025913 Bacteria 12153
166 Ga0207671_10000596 3300025914 Bacteria 48191
167 Ga0207671_10001418 3300025914 Bacteria 27830
168 Ga0207657_10001962 3300025919 Bacteria 22200
169 Ga0207657_10067115 3300025919 Bacteria 3051
170 Ga0207681_10000020 3300025923 Bacteria 240498
171 Ga0207681_10144085 3300025923 Bacteria 1778
172 Ga0207694_10020175 3300025924 Bacteria 5040
173 Ga0207650_10000367 3300025925 Bacteria 42933
174 Ga0207687_10009501 3300025927 Bacteria 6360
175 Ga0207687_10181647 3300025927 Bacteria 1630
176 Ga0207644_10000131 3300025931 Bacteria 54340
177 Ga0207644_10004913 3300025931 Bacteria 8715
178 Ga0207644_10228982 3300025931 Bacteria 1476
179 Ga0207690_10000070 3300025932 Bacteria 88786
180 Ga0207706_10008469 3300025933 Bacteria 9486
181 Ga0207706_10044674 3300025933 Bacteria 3927
182 Ga0207706_10227887 3300025933 Bacteria 1631
183 Ga0207670_10008824 3300025936 Bacteria 5712
184 Ga0207711_10000021 3300025941 Bacteria 355952
185 Ga0207711_10018357 3300025941 Bacteria 5813
186 Ga0207667_10000603 3300025949 Bacteria 46518
187 Ga0207667_10010624 3300025949 Bacteria 10748
188 Ga0207712_10000009 3300025961 Bacteria 518177
189 Ga0207712_10000687 3300025961 Bacteria 26162
190 Ga0207712_10092310 3300025961 Bacteria 2232
191 Ga0207668_10000040 3300025972 Bacteria 106427
192 Ga0207668_10019329 3300025972 Bacteria 4304
193 Ga0207668_10087821 3300025972 Bacteria 2275
194 Ga0207640_10035279 3300025981 Bacteria 3129
195 Ga0207658_10000424 3300025986 Bacteria 40038
196 Ga0207658_10001139 3300025986 Bacteria 21329
197 Ga0207677_10000078 3300026023 Bacteria 80705
198 Ga0207703_10015968 3300026035 Bacteria 5855
199 Ga0207639_10004874 3300026041 Bacteria 9039
200 Ga0207639_10252977 3300026041 Bacteria 1537
201 Ga0207639_10403128 3300026041 Bacteria 1232
202 Ga0207678_10035774 3300026067 Bacteria 4323
203 Ga0207678_10308740 3300026067 Bacteria 1360
204 Ga0207702_10009891 3300026078 Bacteria 7994
205 Ga0207641_10000001 3300026088 Bacteria 1180841
206 Ga0207641_10000107 3300026088 Bacteria 121220
207 Ga0207641_10000386 3300026088 Bacteria 52430
208 Ga0207641_10086165 3300026088 Bacteria 2738
209 Ga0207676_10000057 3300026095 Bacteria 121220
210 Ga0207676_10001692 3300026095 Bacteria 16269
211 Ga0207674_10068280 3300026116 Bacteria 3577
212 Ga0207674_10141234 3300026116 Bacteria 2367
213 Ga0207675_100000110 3300026118 Bacteria 66177
214 Ga0207698_10013640 3300026142 Bacteria 5370
215 Ga0209281_1013436 3300027111 Bacteria 1768
216 Ga0268266_10000009 3300028379 Bacteria 1097737
217 Ga0268266_10000058 3300028379 Bacteria 277346
218 Ga0268266_10004351 3300028379 Bacteria 13609
219 Ga0268265_10000080 3300028380 Bacteria 121220
220 Ga0268265_10000149 3300028380 Bacteria 86376
221 Ga0268265_10013354 3300028380 Bacteria 5580
222 Ga0268265_10975484 3300028380 Bacteria 836
223 Ga0268264_10000003 3300028381 Bacteria 1141976
224 Ga0268264_10006810 3300028381 Bacteria 9598
225 Ga0268264_10019624 3300028381 Bacteria 5522
226 Ga0307408_100024191 3300031548 Bacteria 4145
227 Ga0307405_10019214 3300031731 Bacteria 3789
228 Ga0307405_10248466 3300031731 Unclassified 1322
229 Ga0307405_10291987 3300031731 Bacteria 1233
230 Ga0307413_10636786 3300031824 Bacteria 877
231 Ga0307410_10139893 3300031852 Bacteria 1789
232 Ga0307406_10361897 3300031901 Unclassified 1137
233 Ga0307407_10058567 3300031903 Unclassified 2240
234 Ga0307412_10403554 3300031911 Unclassified 1113
235 Ga0307409_100071910 3300031995 Bacteria 2752
236 Ga0307409_100125274 3300031995 Bacteria 2184
237 Ga0307409_100553302 3300031995 Bacteria 1130
238 Ga0307416_100151428 3300032002 Bacteria 2128
239 Ga0307416_100337843 3300032002 Bacteria 1517
240 Ga0307414_10004116 3300032004 Bacteria 7855
241 Ga0307414_10051816 3300032004 Bacteria 2852
242 Ga0307414_10166404 3300032004 Bacteria 1758
243 Ga0307414_10170112 3300032004 Bacteria 1741
244 Ga0307414_10212248 3300032004 Bacteria 1583
245 Ga0307414_10392995 3300032004 Bacteria 1202
246 Ga0307411_10163972 3300032005 Bacteria 1668
247 Ga0307411_10218372 3300032005 Bacteria 1477
248 Ga0307411_10485798 3300032005 Bacteria 1041
249 Ga0307415_100040237 3300032126 Bacteria 3095
250 Ga0395899_0000392 3300037312 Bacteria 52225
251 Ga0395900_0000004 3300037418 Bacteria 564908
252 Ga0395898_0006657 3300037466 Bacteria 12323
253 Ga0395905_0008514 3300037471 Bacteria 10112
254 Ga0395901_0000005 3300038443 Bacteria 544998
255 Ga0237819_09969 3300038705 Bacteria 1255
256 Ga0436365_1882402 3300039437 Bacteria 15518
257 Ga0436363_0327097 3300039450 Bacteria 1030
258 Ga0436362_1050079 3300039453 Bacteria 3905
259 Ga0439465_0072147 3300041413 Bacteria 1159
260 Ga0439446_0124204 3300042156 Bacteria 833
261 Ga0453684_0644731 3300044712 Bacteria 1156
262 Ga0495606_0028599 3300046507 Bacteria 3929
263 Ga0495643_0223000 3300046522 Bacteria 893
264 Ga0495663_0006634 3300046525 Bacteria 3193
265 Ga0495663_0013036 3300046525 Bacteria 2322
266 Ga0495642_0077002 3300046528 Bacteria 1401
267 Ga0495654_0002957 3300046530 Bacteria 10638
268 Ga0495597_0008846 3300046542 Bacteria 5023
269 Ga0495597_0130134 3300046542 Bacteria 1044
270 Ga0495668_0000511 3300046616 Bacteria 48358
271 Ga0495668_0002679 3300046616 Bacteria 14297
272 Ga0495668_0007127 3300046616 Bacteria 7201
273 Ga0495668_0062635 3300046616 Bacteria 2049
274 Ga0495625_0084309 3300046660 Bacteria 2207
275 Ga0495589_0050198 3300046794 Bacteria 2064
276 Ga0495686_0000171 3300047472 Bacteria 123194
277 Ga0495686_0039736 3300047472 Bacteria 3003
278 Ga0495686_0169303 3300047472 Bacteria 1271
279 Ga0496101_0028324 3300048904 Bacteria 3910
280 Ga0496101_0126391 3300048904 Bacteria 1938
281 Ga0496102_0000069 3300048905 Bacteria 156067
282 Ga0496102_0036389 3300048905 Bacteria 4434
283 Ga0496103_0000173 3300048906 Bacteria 67412
284 Ga0496103_0043041 3300048906 Bacteria 2779
285 Ga0496103_0302382 3300048906 Bacteria 1029
286 Ga0496106_0197153 3300048909 Bacteria 1602
287 Ga0496115_0036235 3300048918 Bacteria 3905
288 Ga0496116_0012144 3300048919 Bacteria 7052
289 Ga0496116_0061266 3300048919 Bacteria 2436
290 Ga0496117_0000485 3300048920 Bacteria 65840
291 Ga0496117_0112942 3300048920 Bacteria 1688
292 Ga0496117_0121999 3300048920 Bacteria 1599
293 Ga0496118_0000190 3300048921 Bacteria 108017
294 Ga0496118_0000597 3300048921 Bacteria 59798
295 Ga0496118_0025892 3300048921 Bacteria 5015
296 Ga0496119_0041465 3300048922 Bacteria 2931
297 Ga0496120_0054539 3300048923 Bacteria 2265
298 Ga0496121_0001310 3300048924 Bacteria 42635
299 Ga0496121_0001416 3300048924 Bacteria 40647
300 Ga0496121_0069558 3300048924 Bacteria 2840
301 Ga0496124_0000546 3300048927 Bacteria 63624
302 Ga0496124_0021671 3300048927 Bacteria 5918
303 Ga0496125_0018861 3300048928 Bacteria 6531
304 Ga0496126_0002771 3300048929 Bacteria 23099
305 Ga0496126_0012467 3300048929 Bacteria 8706
306 Ga0496126_0122198 3300048929 Bacteria 2257
307 Ga0496126_0340859 3300048929 Bacteria 1228
308 Ga0501034_0082063 3300049571 Bacteria 3226
309 Ga0501038_0416045 3300049574 Bacteria 1038
310 nmdc:mga0n895_191814_c1 3300050512 Bacteria 2074
311 Ga0495655_0115901 3300053083 Bacteria 810
312 Ga0500643_003175 3300053087 Bacteria 8034
313 Ga0500646_0033271 3300053090 Bacteria 1426
314 Ga0500592_000278 3300053116 Bacteria 9049
315 Ga0500608_000063 3300053122 Bacteria 46532
316 Ga0500568_0018335 3300053139 Bacteria 3066
317 Ga0500604_0000002 3300053151 Bacteria 165603
318 Ga0500616_0000660 3300053153 Bacteria 41164
319 Ga0500622_0003151 3300053156 Bacteria 11293
320 Ga0500622_0011955 3300053156 Bacteria 4719
321 Ga0500622_0042782 3300053156 Bacteria 2351
322 Ga0500627_0001506 3300053158 Bacteria 6551
323 Ga0500611_031681 3300053727 Bacteria 1100
324 Ga0500645_005069 3300053730 Bacteria 4923

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005338 Ga0068868_100000030 Ga0068868_10000003060 190
2 3300005339 Ga0070660_100000368 Ga0070660_10000036811 190
3 3300005366 Ga0070659_100000058 Ga0070659_10000005820 190
4 3300005441 Ga0070700_100176324 Ga0070700_1001763242 190
5 3300025907 Ga0207645_10145838 Ga0207645_101458381 190
6 3300025919 Ga0207657_10001962 Ga0207657_100019623 190
7 3300025932 Ga0207690_10000070 Ga0207690_1000007065 190
8 3300026023 Ga0207677_10000078 Ga0207677_1000007864 190
9 3300005354 Ga0070675_100457149 Ga0070675_1004571491 200
10 3300005329 Ga0070683_100369873 Ga0070683_1003698732 201
11 3300009551 Ga0105238_10086377 Ga0105238_100863773 201
12 3300020070 Ga0206356_10246873 Ga0206356_102468732 201
13 3300053083 Ga0495655_0115901 Ga0495655_0115901_14_673 203
14 3300006946 Ga0079104_1005474 Ga0079104_10054745 207
15 3300027111 Ga0209281_1013436 Ga0209281_10134362 207
16 3300046528 Ga0495642_0077002 Ga0495642_0077002_189_956 208
17 3300053727 Ga0500611_031681 Ga0500611_031681_302_1069 209
18 3300032004 Ga0307414_10392995 Ga0307414_103929951 211
19 3300032005 Ga0307411_10485798 Ga0307411_104857981 211
20 3300048928 Ga0496125_0018861 Ga0496125_0018861_4378_5136 212
21 3300048929 Ga0496126_0002771 Ga0496126_0002771_8574_9332 212
22 3300053730 Ga0500645_005069 Ga0500645_005069_3477_4214 212
23 3300005347 Ga0070668_100001117 Ga0070668_10000111713 213
24 3300005355 Ga0070671_100004688 Ga0070671_1000046887 213
25 3300005617 Ga0068859_100041348 Ga0068859_1000413483 213
26 3300005841 Ga0068863_100000001 Ga0068863_100000001461 213
27 3300005843 Ga0068860_100054142 Ga0068860_1000541422 213
28 3300005844 Ga0068862_100003649 Ga0068862_1000036497 213
29 3300006931 Ga0097620_100041350 Ga0097620_1000413503 213
30 3300009553 Ga0105249_10057782 Ga0105249_100577822 213
31 3300025931 Ga0207644_10000131 Ga0207644_1000013125 213
32 3300025961 Ga0207712_10092310 Ga0207712_100923102 213
33 3300025972 Ga0207668_10000040 Ga0207668_1000004088 213
34 3300026088 Ga0207641_10000001 Ga0207641_10000001797 213
35 3300028380 Ga0268265_10013354 Ga0268265_100133544 213
36 3300028381 Ga0268264_10019624 Ga0268264_100196242 213
37 3300042156 Ga0439446_0124204 Ga0439446_0124204_51_815 213
38 3300053139 Ga0500568_0018335 Ga0500568_0018335_1829_2596 213
39 3300053151 Ga0500604_0000002 Ga0500604_0000002_43739_44506 213
40 3300053153 Ga0500616_0000660 Ga0500616_0000660_9721_10488 213
41 3300006186 Ga0075369_10002167 Ga0075369_100021676 214
42 3300025294 Ga0209025_1024091 Ga0209025_10240912 214
43 3300032004 Ga0307414_10170112 Ga0307414_101701122 214
44 3300037312 Ga0395899_0000392 Ga0395899_0000392_21934_22692 214
45 3300037418 Ga0395900_0000004 Ga0395900_0000004_388675_389433 214
46 3300037466 Ga0395898_0006657 Ga0395898_0006657_5815_6573 214
47 3300037471 Ga0395905_0008514 Ga0395905_0008514_5815_6573 214
48 3300038443 Ga0395901_0000005 Ga0395901_0000005_176132_176890 214
49 3300046522 Ga0495643_0223000 Ga0495643_0223000_49_807 214
50 3300048927 Ga0496124_0021671 Ga0496124_0021671_1967_2725 214
51 3300048929 Ga0496126_0340859 Ga0496126_0340859_421_1179 214
52 3300005355 Ga0070671_100247888 Ga0070671_1002478882 215
53 3300005539 Ga0068853_100156835 Ga0068853_1001568352 215
54 3300005547 Ga0070693_100159405 Ga0070693_1001594052 215
55 3300005616 Ga0068852_100103068 Ga0068852_1001030683 215
56 3300006946 Ga0079104_1007441 Ga0079104_10074413 215
57 3300009098 Ga0105245_10180120 Ga0105245_101801203 215
58 3300025927 Ga0207687_10009501 Ga0207687_100095011 215
59 3300025931 Ga0207644_10228982 Ga0207644_102289822 215
60 3300026041 Ga0207639_10252977 Ga0207639_102529772 215
61 3300026088 Ga0207641_10086165 Ga0207641_100861653 215
62 3300039450 Ga0436363_0327097 Ga0436363_0327097_130_897 215
63 3300050512 nmdc:mga0n895_191814_c1 nmdc:mga0n895_191814_c1_1158_1925 215
64 3300053156 Ga0500622_0042782 Ga0500622_0042782_99_827 215
65 3300005617 Ga0068859_100024926 Ga0068859_1000249266 216
66 3300006931 Ga0097620_100024926 Ga0097620_1000249266 216
67 3300053156 Ga0500622_0011955 Ga0500622_0011955_3519_4280 216
68 3300005548 Ga0070665_100005919 Ga0070665_1000059193 217
69 3300028379 Ga0268266_10004351 Ga0268266_1000435113 217
70 3300031548 Ga0307408_100024191 Ga0307408_1000241911 217
71 3300031731 Ga0307405_10291987 Ga0307405_102919872 217
72 3300031995 Ga0307409_100553302 Ga0307409_1005533021 217
73 3300032002 Ga0307416_100151428 Ga0307416_1001514282 217
74 3300047472 Ga0495686_0169303 Ga0495686_0169303_108_872 217
75 3300032005 Ga0307411_10218372 Ga0307411_102183721 218
76 3300039453 Ga0436362_1050079 Ga0436362_1050079_117_911 218
77 3300053087 Ga0500643_003175 Ga0500643_003175_1783_2544 218
78 3300002076 JGI24749J21850_1009247 JGI24749J21850_10092473 219
79 3300003781 Ga0055536_1007593 Ga0055536_10075933 219
80 3300003791 Ga0055530_10000477 Ga0055530_1000047721 219
81 3300003794 Ga0055531_10001670 Ga0055531_100016708 219
82 3300025250 Ga0209026_1000750 Ga0209026_10007506 219
83 3300025292 Ga0209676_1005805 Ga0209676_10058053 219
84 3300025298 Ga0209050_1000622 Ga0209050_100062220 219
85 3300025304 Ga0209257_1001156 Ga0209257_100115620 219
86 3300048904 Ga0496101_0126391 Ga0496101_0126391_331_1089 219
87 3300048909 Ga0496106_0197153 Ga0496106_0197153_827_1585 219
88 3300048918 Ga0496115_0036235 Ga0496115_0036235_749_1471 219
89 3300031824 Ga0307413_10636786 Ga0307413_106367861 220
90 3300003781 Ga0055536_1000678 Ga0055536_100067810 223
91 3300003791 Ga0055530_10002471 Ga0055530_1000247110 223
92 3300025292 Ga0209676_1000207 Ga0209676_100020741 223
93 3300025298 Ga0209050_1000056 Ga0209050_100005641 223
94 3300025303 Ga0209051_1003749 Ga0209051_10037496 223
95 3300046660 Ga0495625_0084309 Ga0495625_0084309_1096_1863 223
96 3300001904 JGI24736J21556_1006721 JGI24736J21556_10067214 224
97 3300001915 JGI24741J21665_1026858 JGI24741J21665_10268581 224
98 3300001976 JGI24752J21851_1000204 JGI24752J21851_10002043 224
99 3300001979 JGI24740J21852_10010761 JGI24740J21852_100107612 224
100 3300001989 JGI24739J22299_10043476 JGI24739J22299_100434762 224
101 3300001990 JGI24737J22298_10007449 JGI24737J22298_100074495 224
102 3300002067 JGI24735J21928_10024670 JGI24735J21928_100246703 224
103 3300002070 JGI24750J21931_1000342 JGI24750J21931_10003425 224
104 3300002074 JGI24748J21848_1000047 JGI24748J21848_10000478 224
105 3300002075 JGI24738J21930_10000723 JGI24738J21930_100007238 224
106 3300002239 JGI24034J26672_10000048 JGI24034J26672_1000004828 224
107 3300002244 JGI24742J22300_10002715 JGI24742J22300_100027154 224
108 3300005329 Ga0070683_100187144 Ga0070683_1001871443 224
109 3300005330 Ga0070690_100000004 Ga0070690_100000004139 224
110 3300005335 Ga0070666_10000011 Ga0070666_1000001179 224
111 3300005339 Ga0070660_100223599 Ga0070660_1002235992 224
112 3300005340 Ga0070689_100013741 Ga0070689_1000137413 224
113 3300005347 Ga0070668_100072415 Ga0070668_1000724153 224
114 3300005353 Ga0070669_100000009 Ga0070669_100000009116 224
115 3300005366 Ga0070659_100019070 Ga0070659_1000190704 224
116 3300005367 Ga0070667_100007750 Ga0070667_1000077502 224
117 3300005457 Ga0070662_100245128 Ga0070662_1002451282 224
118 3300005458 Ga0070681_10493941 Ga0070681_104939412 224
119 3300005466 Ga0070685_10000225 Ga0070685_1000022516 224
120 3300005544 Ga0070686_100000001 Ga0070686_100000001440 224
121 3300005548 Ga0070665_100000004 Ga0070665_100000004175 224
122 3300005618 Ga0068864_100107346 Ga0068864_1001073462 224
123 3300005719 Ga0068861_100001151 Ga0068861_1000011516 224
124 3300005834 Ga0068851_10010951 Ga0068851_100109515 224
125 3300005841 Ga0068863_100000010 Ga0068863_100000010145 224
126 3300005842 Ga0068858_100008050 Ga0068858_1000080507 224
127 3300005843 Ga0068860_100000030 Ga0068860_100000030181 224
128 3300005843 Ga0068860_100003159 Ga0068860_1000031593 224
129 3300005844 Ga0068862_100000421 Ga0068862_1000004217 224
130 3300009093 Ga0105240_10008703 Ga0105240_100087031 224
131 3300009177 Ga0105248_10381877 Ga0105248_103818772 224
132 3300009545 Ga0105237_10000626 Ga0105237_1000062623 224
133 3300009545 Ga0105237_10246475 Ga0105237_102464751 224
134 3300009553 Ga0105249_10000016 Ga0105249_10000016181 224
135 3300010375 Ga0105239_10000438 Ga0105239_1000043822 224
136 3300013100 Ga0157373_10057619 Ga0157373_100576193 224
137 3300013104 Ga0157370_10031308 Ga0157370_100313082 224
138 3300013307 Ga0157372_10353963 Ga0157372_103539632 224
139 3300014326 Ga0157380_10003092 Ga0157380_100030926 224
140 3300014968 Ga0157379_10006196 Ga0157379_100061966 224
141 3300017792 Ga0163161_10000044 Ga0163161_1000004429 224
142 3300025223 Ga0207672_1001669 Ga0207672_10016693 224
143 3300025321 Ga0207656_10031058 Ga0207656_100310582 224
144 3300025903 Ga0207680_10000008 Ga0207680_10000008433 224
145 3300025909 Ga0207705_10065282 Ga0207705_100652822 224
146 3300025911 Ga0207654_10003073 Ga0207654_100030736 224
147 3300025913 Ga0207695_10007894 Ga0207695_1000789410 224
148 3300025913 Ga0207695_10009319 Ga0207695_100093194 224
149 3300025914 Ga0207671_10000596 Ga0207671_1000059625 224
150 3300025914 Ga0207671_10001418 Ga0207671_1000141817 224
151 3300025919 Ga0207657_10067115 Ga0207657_100671152 224
152 3300025923 Ga0207681_10000020 Ga0207681_1000002099 224
153 3300025924 Ga0207694_10020175 Ga0207694_100201752 224
154 3300025931 Ga0207644_10004913 Ga0207644_100049135 224
155 3300025933 Ga0207706_10044674 Ga0207706_100446744 224
156 3300025933 Ga0207706_10227887 Ga0207706_102278872 224
157 3300025936 Ga0207670_10008824 Ga0207670_100088244 224
158 3300025941 Ga0207711_10018357 Ga0207711_100183574 224
159 3300025949 Ga0207667_10000603 Ga0207667_100006038 224
160 3300025949 Ga0207667_10010624 Ga0207667_100106244 224
161 3300025961 Ga0207712_10000009 Ga0207712_10000009433 224
162 3300025972 Ga0207668_10087821 Ga0207668_100878212 224
163 3300025981 Ga0207640_10035279 Ga0207640_100352793 224
164 3300025986 Ga0207658_10001139 Ga0207658_1000113922 224
165 3300026035 Ga0207703_10015968 Ga0207703_100159687 224
166 3300026067 Ga0207678_10035774 Ga0207678_100357743 224
167 3300026078 Ga0207702_10009891 Ga0207702_100098916 224
168 3300026088 Ga0207641_10000386 Ga0207641_1000038622 224
169 3300026095 Ga0207676_10001692 Ga0207676_100016922 224
170 3300026116 Ga0207674_10141234 Ga0207674_101412343 224
171 3300026118 Ga0207675_100000110 Ga0207675_10000011038 224
172 3300026142 Ga0207698_10013640 Ga0207698_100136402 224
173 3300028379 Ga0268266_10000009 Ga0268266_10000009614 224
174 3300028380 Ga0268265_10000149 Ga0268265_1000014962 224
175 3300028381 Ga0268264_10000003 Ga0268264_100000031055 224
176 3300028381 Ga0268264_10006810 Ga0268264_1000681010 224
177 3300048905 Ga0496102_0036389 Ga0496102_0036389_447_1205 224
178 3300048906 Ga0496103_0043041 Ga0496103_0043041_2003_2761 224
179 3300048919 Ga0496116_0061266 Ga0496116_0061266_1266_2024 224
180 3300048920 Ga0496117_0121999 Ga0496117_0121999_622_1386 224
181 3300048921 Ga0496118_0025892 Ga0496118_0025892_161_919 224
182 3300048924 Ga0496121_0001310 Ga0496121_0001310_15638_16402 224
183 3300048924 Ga0496121_0001416 Ga0496121_0001416_24596_25360 224
184 3300048929 Ga0496126_0012467 Ga0496126_0012467_2588_3352 224
185 3300001976 JGI24752J21851_1000998 JGI24752J21851_10009985 225
186 3300001989 JGI24739J22299_10003311 JGI24739J22299_100033114 225
187 3300002075 JGI24738J21930_10005952 JGI24738J21930_100059522 225
188 3300005295 Ga0065707_10082043 Ga0065707_100820438 225
189 3300005295 Ga0065707_10122235 Ga0065707_101222352 225
190 3300005330 Ga0070690_100223495 Ga0070690_1002234952 225
191 3300005331 Ga0070670_100000209 Ga0070670_10000020923 225
192 3300005333 Ga0070677_10000056 Ga0070677_1000005633 225
193 3300005347 Ga0070668_100028068 Ga0070668_1000280685 225
194 3300005353 Ga0070669_100183296 Ga0070669_1001832962 225
195 3300005353 Ga0070669_100408523 Ga0070669_1004085232 225
196 3300005354 Ga0070675_100055213 Ga0070675_1000552132 225
197 3300005367 Ga0070667_100000127 Ga0070667_10000012711 225
198 3300005456 Ga0070678_100350466 Ga0070678_1003504661 225
199 3300005457 Ga0070662_100328676 Ga0070662_1003286761 225
200 3300005539 Ga0068853_100003534 Ga0068853_10000353411 225
201 3300005539 Ga0068853_100082094 Ga0068853_1000820946 225
202 3300005544 Ga0070686_100027569 Ga0070686_1000275694 225
203 3300005548 Ga0070665_100000011 Ga0070665_100000011311 225
204 3300005577 Ga0068857_100086153 Ga0068857_1000861533 225
205 3300005578 Ga0068854_100031378 Ga0068854_1000313783 225
206 3300005618 Ga0068864_100000062 Ga0068864_10000006233 225
207 3300005841 Ga0068863_100000064 Ga0068863_100000064102 225
208 3300005844 Ga0068862_100000079 Ga0068862_10000007991 225
209 3300005937 Ga0081455_10000212 Ga0081455_1000021220 225
210 3300009011 Ga0105251_10000625 Ga0105251_100006252 225
211 3300009098 Ga0105245_10305556 Ga0105245_103055561 225
212 3300009101 Ga0105247_10007723 Ga0105247_100077233 225
213 3300009177 Ga0105248_10000014 Ga0105248_10000014275 225
214 3300009551 Ga0105238_10099369 Ga0105238_100993694 225
215 3300009553 Ga0105249_10000907 Ga0105249_1000090728 225
216 3300013297 Ga0157378_10041639 Ga0157378_100416392 225
217 3300013306 Ga0163162_10014953 Ga0163162_100149537 225
218 3300014326 Ga0157380_10001834 Ga0157380_1000183413 225
219 3300014968 Ga0157379_10033907 Ga0157379_100339077 225
220 3300021384 Ga0213876_10002175 Ga0213876_100021754 225
221 3300025735 Ga0207713_1004428 Ga0207713_10044282 225
222 3300025893 Ga0207682_10000368 Ga0207682_1000036819 225
223 3300025923 Ga0207681_10144085 Ga0207681_101440851 225
224 3300025925 Ga0207650_10000367 Ga0207650_1000036728 225
225 3300025927 Ga0207687_10181647 Ga0207687_101816471 225
226 3300025933 Ga0207706_10008469 Ga0207706_100084695 225
227 3300025941 Ga0207711_10000021 Ga0207711_1000002154 225
228 3300025961 Ga0207712_10000687 Ga0207712_1000068728 225
229 3300025972 Ga0207668_10019329 Ga0207668_100193292 225
230 3300025986 Ga0207658_10000424 Ga0207658_1000042420 225
231 3300026041 Ga0207639_10004874 Ga0207639_100048749 225
232 3300026041 Ga0207639_10403128 Ga0207639_104031281 225
233 3300026067 Ga0207678_10308740 Ga0207678_103087402 225
234 3300026088 Ga0207641_10000107 Ga0207641_10000107106 225
235 3300026095 Ga0207676_10000057 Ga0207676_10000057106 225
236 3300026116 Ga0207674_10068280 Ga0207674_100682803 225
237 3300028379 Ga0268266_10000058 Ga0268266_10000058217 225
238 3300028380 Ga0268265_10000080 Ga0268265_10000080106 225
239 3300028380 Ga0268265_10975484 Ga0268265_109754841 225
240 3300031731 Ga0307405_10019214 Ga0307405_100192143 225
241 3300031731 Ga0307405_10248466 Ga0307405_102484662 225
242 3300031852 Ga0307410_10139893 Ga0307410_101398933 225
243 3300031901 Ga0307406_10361897 Ga0307406_103618971 225
244 3300031903 Ga0307407_10058567 Ga0307407_100585674 225
245 3300031911 Ga0307412_10403554 Ga0307412_104035541 225
246 3300031995 Ga0307409_100071910 Ga0307409_1000719103 225
247 3300031995 Ga0307409_100125274 Ga0307409_1001252741 225
248 3300032002 Ga0307416_100337843 Ga0307416_1003378431 225
249 3300032004 Ga0307414_10051816 Ga0307414_100518163 225
250 3300032005 Ga0307411_10163972 Ga0307411_101639721 225
251 3300032126 Ga0307415_100040237 Ga0307415_1000402372 225
252 3300039437 Ga0436365_1882402 Ga0436365_1882402_8030_8797 225
253 3300046525 Ga0495663_0006634 Ga0495663_0006634_923_1684 225
254 3300046525 Ga0495663_0013036 Ga0495663_0013036_1032_1793 225
255 3300046530 Ga0495654_0002957 Ga0495654_0002957_5458_6219 225
256 3300046616 Ga0495668_0002679 Ga0495668_0002679_5342_6103 225
257 3300046616 Ga0495668_0062635 Ga0495668_0062635_283_1044 225
258 3300046794 Ga0495589_0050198 Ga0495589_0050198_836_1597 225
259 3300047472 Ga0495686_0000171 Ga0495686_0000171_47565_48329 225
260 3300048904 Ga0496101_0028324 Ga0496101_0028324_3068_3829 225
261 3300048905 Ga0496102_0000069 Ga0496102_0000069_48022_48786 225
262 3300048906 Ga0496103_0000173 Ga0496103_0000173_6614_7378 225
263 3300048919 Ga0496116_0012144 Ga0496116_0012144_1364_2128 225
264 3300048920 Ga0496117_0000485 Ga0496117_0000485_59232_59996 225
265 3300048920 Ga0496117_0112942 Ga0496117_0112942_18_779 225
266 3300048921 Ga0496118_0000190 Ga0496118_0000190_59232_59996 225
267 3300048921 Ga0496118_0000597 Ga0496118_0000597_10737_11498 225
268 3300048922 Ga0496119_0041465 Ga0496119_0041465_409_1173 225
269 3300048923 Ga0496120_0054539 Ga0496120_0054539_886_1650 225
270 3300048924 Ga0496121_0069558 Ga0496121_0069558_1138_1899 225
271 3300048927 Ga0496124_0000546 Ga0496124_0000546_3629_4393 225
272 3300049571 Ga0501034_0082063 Ga0501034_0082063_997_1761 225
273 3300049574 Ga0501038_0416045 Ga0501038_0416045_211_975 225
274 3300053090 Ga0500646_0033271 Ga0500646_0033271_367_1131 225
275 3300053116 Ga0500592_000278 Ga0500592_000278_5271_6032 225
276 3300053158 Ga0500627_0001506 Ga0500627_0001506_2463_3224 225
277 3300025292 Ga0209676_1016559 Ga0209676_10165593 226
278 3300025298 Ga0209050_1004683 Ga0209050_10046833 226
279 3300032004 Ga0307414_10004116 Ga0307414_100041164 226
280 3300032004 Ga0307414_10166404 Ga0307414_101664042 226
281 3300032004 Ga0307414_10212248 Ga0307414_102122482 226
282 3300038705 Ga0237819_09969 Ga0237819_09969_431_1177 226
283 3300048929 Ga0496126_0122198 Ga0496126_0122198_877_1623 226
284 iso_pu_bacteria 2643221560 2643821779 226
285 iso_pu_bacteria 2643221563 2643833283 226
286 iso_pu_bacteria 2643221608 2644054210 226
287 iso_pu_bacteria 2852680915 2852681956 226
288 3300003791 Ga0055530_10001413 Ga0055530_100014137 228
289 3300003794 Ga0055531_10004053 Ga0055531_100040536 228
290 3300005262 Ga0065165_1001142 Ga0065165_100114216 228
291 3300025297 Ga0209758_1006744 Ga0209758_10067443 228
292 3300025298 Ga0209050_1000073 Ga0209050_100007324 228
293 3300025304 Ga0209257_1001052 Ga0209257_100105224 228
294 3300003320 rootH2_10022336 rootH2_100223364 229
295 3300003771 Ga0055526_1001613 Ga0055526_10016139 229
296 3300003781 Ga0055536_1015161 Ga0055536_10151613 229
297 3300003791 Ga0055530_10004063 Ga0055530_100040635 229
298 3300003792 Ga0055540_1001582 Ga0055540_10015825 229
299 3300003794 Ga0055531_10005079 Ga0055531_100050795 229
300 3300003794 Ga0055531_10047078 Ga0055531_100470782 229
301 3300006195 Ga0075366_10011158 Ga0075366_100111587 229
302 3300025292 Ga0209676_1004203 Ga0209676_10042035 229
303 3300025295 Ga0209564_1002693 Ga0209564_10026937 229
304 3300025295 Ga0209564_1012710 Ga0209564_10127103 229
305 3300025297 Ga0209758_1020158 Ga0209758_10201582 229
306 3300025298 Ga0209050_1000005 Ga0209050_10000051258 229
307 3300025299 Ga0209256_1019772 Ga0209256_10197723 229
308 3300025303 Ga0209051_1000152 Ga0209051_100015285 229
309 3300025304 Ga0209257_1000772 Ga0209257_10007727 229
310 3300025304 Ga0209257_1003117 Ga0209257_10031175 229
311 3300041413 Ga0439465_0072147 Ga0439465_0072147_168_932 229
312 3300044712 Ga0453684_0644731 Ga0453684_0644731_344_1081 229
313 3300046507 Ga0495606_0028599 Ga0495606_0028599_129_884 229
314 3300046542 Ga0495597_0008846 Ga0495597_0008846_3215_3970 229
315 3300046542 Ga0495597_0130134 Ga0495597_0130134_251_1006 229
316 3300046616 Ga0495668_0000511 Ga0495668_0000511_8447_9205 229
317 3300046616 Ga0495668_0007127 Ga0495668_0007127_3497_4252 229
318 3300048906 Ga0496103_0302382 Ga0496103_0302382_124_888 229
319 3300053156 Ga0500622_0003151 Ga0500622_0003151_1213_1968 229
320 iso_pu_bacteria 2585428106 2587918214 229
321 iso_pu_bacteria 2643221598 2644000772 229
322 iso_pu_bacteria 2643221614 2644088162 229
323 iso_pu_bacteria 2643221640 2644224690 229
324 iso_pu_bacteria 2643221642 2644234375 229
325 iso_pu_bacteria 2643221661 2644343400 229
326 iso_pu_bacteria 2643221666 2644369123 229
327 iso_pu_bacteria 2884960567 2884962154 229
328 2010549000 RicEn_FSXC52503_g1 RicEn_460880 230
329 3300003781 Ga0055536_1000767 Ga0055536_10007679 230
330 3300003791 Ga0055530_10006936 Ga0055530_100069364 230
331 3300003794 Ga0055531_10001084 Ga0055531_100010849 230
332 3300025292 Ga0209676_1000233 Ga0209676_100023388 230
333 3300025298 Ga0209050_1000624 Ga0209050_100062439 230
334 3300025304 Ga0209257_1000265 Ga0209257_100026588 230
335 3300047472 Ga0495686_0039736 Ga0495686_0039736_2181_2948 230
336 3300053122 Ga0500608_000063 Ga0500608_000063_8158_8910 230
337 iso_pu_bacteria 2857504554 2857508185 230
338 iso_pu_bacteria 2928531327 2928535821 230

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

29

138

0.97

PF04397

LytTR

LytTr DNA-binding domain

170

266

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6m8o-assembly1.cif.gz_A crystal structure of the receiver domain of lytr from staphylococcus aureus 0.9198 3 100
3cz5-assembly2.cif.gz_B crystal structure of two-component response regulator, luxr family, from aurantimonas sp. si85-9a1 0.8964 2 97
6ifh-assembly1.cif.gz_A unphosphorylated spo0f from paenisporosarcina sp. tg-14 0.8918 19 99
3jte-assembly1.cif.gz_A crystal structure of response regulator receiver domain protein from clostridium thermocellum 0.8892 17 105
2pl1-assembly1.cif.gz_A berrylium fluoride activated receiver domain of e.coli phop 0.8891 17 102
ID Description Score Start End Superfamily
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9261 15 109 3.40.50.2300
af_P0AFU4_2_125_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9213 17 99 3.40.50.2300
6m8oA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9198 3 100 3.40.50.2300
af_P0AFT5_1_126_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9153 3 100 3.40.50.2300
4tmyB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9153 10 99 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A7X6GAM3-F1-model_v4 deleted 0.9711 2 87
AF-A0A534DY04-F1-model_v4 deleted 0.948 3 108
AF-A0A4Q3C4A0-F1-model_v4 LytTR family transcriptional regulator 0.9449 138 222 GO:0003677
AF-A0A7V9P7Z4-F1-model_v4 Response regulator 0.9367 2 96 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A3A4VNE9-F1-model_v4 Response regulator 0.9164 17 101 GO:0000160

Feature Viewer

pLDDT pTM Quality
89.08 0.84 High
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Predicted Structure (AlphaFold2)

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