F410568

General Info

Members Datasets Scaffolds Average Seq Length
331 197 660 290

Family's Representative Sequence

Representative Sequence 3300032005|Ga0307411_10025674|Ga0307411_100256742
Length 312
Sequence VAPTLELLRVSASTPPAPGVRAVPVVTKLIDTSTCIGCKACEVACQEWNDLPPETTVQMGTYQTMPDMSPNFWNLIKFREHEENGALQWLMRKDQCMHCSEPGCLAACPAPGAIVQYTNGIVDFQQDQCIGCGYCITGCPFDVPKIHTRTKRVYKCTLCVDRVAVGLQPACVKACPTSCLQFGTKDAMLDVAGERVAQLQANGFAKAAIYDPAGVGGTSVVTVLVHGDRPELYGLPRDPSVPLAVRLWKGPLKWIGNVAMLGGVLGVFVHYLRFGRKNLEGTERSKVPDLKKGATEPNESFPFPPFSPLLRF

Samples

Sample ID Description Type Environment
1 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
26 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
27 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
35 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
36 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
37 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
42 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
43 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
44 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
45 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
54 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
58 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
59 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
60 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
61 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
62 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
63 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
64 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
65 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
67 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
68 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
73 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
74 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
75 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
76 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
77 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
78 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
79 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
80 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
81 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
85 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
86 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
88 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
89 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
128 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
131 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
132 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
133 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
134 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
135 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
136 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
137 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
138 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
139 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
140 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
141 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
142 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
143 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
144 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
145 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
146 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
147 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
148 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
149 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
150 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
151 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
152 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
153 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
154 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
155 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
156 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
157 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
158 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
159 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
160 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
161 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
162 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
163 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
164 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
165 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
166 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
167 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
168 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
169 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
170 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
171 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
177 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
178 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
179 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
180 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
181 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
182 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
183 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
184 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
185 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
186 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
187 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
188 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
189 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
190 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
191 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
192 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
193 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
194 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
195 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
196 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
197 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.28
Metatranscriptomes 2.72
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.3
Nodule 0
Rhizoplane 1.81
Rhizosphere 97.58
Stem 0
Stem Tuber 0
Unclassified 0.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307411_10025674 3300032005 Bacteria 3535
2 Ga0058863_11874132 3300004799 Bacteria 2258
3 Ga0058861_10098190 3300004800 Bacteria 4280
4 Ga0058862_10078591 3300004803 Bacteria 3181
5 Ga0058862_12590544 3300004803 Bacteria 3337
6 Ga0065715_10007127 3300005293 Bacteria 3202
7 Ga0065707_10086232 3300005295 Bacteria 5577
8 Ga0070676_10202446 3300005328 Bacteria 1302
9 Ga0070690_100013165 3300005330 Bacteria 4882
10 Ga0070690_100030270 3300005330 Bacteria 3362
11 Ga0070670_100026109 3300005331 Bacteria 5028
12 Ga0070670_100028529 3300005331 Bacteria 4803
13 Ga0070670_100089558 3300005331 Bacteria 2645
14 Ga0068869_100100244 3300005334 Bacteria 2190
15 Ga0070666_10006009 3300005335 Bacteria 7459
16 Ga0070666_10020571 3300005335 Bacteria 4267
17 Ga0068868_100417018 3300005338 Bacteria 1162
18 Ga0068868_100511989 3300005338 Bacteria 1052
19 Ga0070660_100012685 3300005339 Bacteria 6024
20 Ga0070689_100184451 3300005340 Bacteria 1696
21 Ga0070687_100003406 3300005343 Bacteria 6174
22 Ga0070687_100015861 3300005343 Bacteria 3417
23 Ga0070692_10126466 3300005345 Bacteria 1432
24 Ga0070668_100230512 3300005347 Bacteria 1531
25 Ga0070669_100050967 3300005353 Bacteria 3024
26 Ga0070671_100216862 3300005355 Bacteria 1623
27 Ga0070674_100117407 3300005356 Bacteria 1964
28 Ga0070673_100014830 3300005364 Bacteria 5449
29 Ga0070673_100043722 3300005364 Bacteria 3464
30 Ga0070673_100275097 3300005364 Bacteria 1475
31 Ga0070688_100159776 3300005365 Bacteria 1547
32 Ga0070659_100028406 3300005366 Bacteria 4319
33 Ga0070659_100077720 3300005366 Bacteria 2647
34 Ga0070713_100243298 3300005436 Bacteria 1639
35 Ga0070713_100482897 3300005436 Unclassified 1167
36 Ga0070710_10053529 3300005437 Bacteria 2274
37 Ga0070701_10106938 3300005438 Bacteria 1558
38 Ga0070705_100064136 3300005440 Bacteria 2194
39 Ga0070694_100037800 3300005444 Bacteria 3203
40 Ga0070694_100057888 3300005444 Unclassified 2635
41 Ga0070708_100015643 3300005445 Bacteria 6271
42 Ga0070708_100119049 3300005445 Bacteria 2434
43 Ga0070708_100245526 3300005445 Bacteria 1681
44 Ga0070678_100373480 3300005456 Bacteria 1232
45 Ga0070662_100197151 3300005457 Bacteria 1596
46 Ga0070681_10102457 3300005458 Bacteria 2807
47 Ga0070681_10334528 3300005458 Bacteria 1424
48 Ga0068867_100033582 3300005459 Bacteria 3717
49 Ga0070706_100003813 3300005467 Bacteria 14729
50 Ga0070706_100040168 3300005467 Bacteria 4318
51 Ga0070706_100178316 3300005467 Bacteria 1984
52 Ga0070707_100000674 3300005468 Bacteria 33906
53 Ga0070707_100001860 3300005468 Bacteria 20280
54 Ga0070707_100055189 3300005468 Bacteria 3809
55 Ga0070707_100101036 3300005468 Bacteria 2795
56 Ga0070707_100171730 3300005468 Bacteria 2113
57 Ga0070707_100210323 3300005468 Bacteria 1896
58 Ga0070707_100262292 3300005468 Bacteria 1681
59 Ga0070698_100005849 3300005471 Bacteria 13441
60 Ga0070698_100043223 3300005471 Bacteria 4621
61 Ga0070698_100072653 3300005471 Bacteria 3448
62 Ga0070698_100123438 3300005471 Bacteria 2548
63 Ga0070699_100093738 3300005518 Bacteria 2628
64 Ga0070699_100101784 3300005518 Bacteria 2518
65 Ga0070699_100172658 3300005518 Bacteria 1916
66 Ga0070679_100021635 3300005530 Bacteria 6279
67 Ga0070679_100058976 3300005530 Bacteria 3825
68 Ga0070697_100038221 3300005536 Bacteria 3878
69 Ga0070697_100062407 3300005536 Bacteria 3041
70 Ga0070697_100091803 3300005536 Bacteria 2511
71 Ga0070697_100534865 3300005536 Bacteria 1027
72 Ga0070697_100588155 3300005536 Bacteria 978
73 Ga0070672_100061352 3300005543 Bacteria 2964
74 Ga0070686_100001146 3300005544 Bacteria 15210
75 Ga0070695_100049651 3300005545 Bacteria 2686
76 Ga0070696_100024140 3300005546 Bacteria 4132
77 Ga0070693_100032036 3300005547 Bacteria 2887
78 Ga0070704_100019825 3300005549 Bacteria 4326
79 Ga0070704_100064518 3300005549 Bacteria 2633
80 Ga0068855_100027848 3300005563 Bacteria 6759
81 Ga0068855_100099534 3300005563 Bacteria 3348
82 Ga0068855_100265757 3300005563 Bacteria 1910
83 Ga0070664_100004735 3300005564 Bacteria 10910
84 Ga0068857_100501588 3300005577 Bacteria 1139
85 Ga0068854_100103184 3300005578 Bacteria 2140
86 Ga0068856_100209633 3300005614 Bacteria 1964
87 Ga0068852_100097771 3300005616 Bacteria 2641
88 Ga0068852_100293432 3300005616 Bacteria 1572
89 Ga0068859_100314193 3300005617 Bacteria 1660
90 Ga0068864_100074324 3300005618 Bacteria 2965
91 Ga0068861_100109024 3300005719 Bacteria 2216
92 Ga0068861_100198157 3300005719 Bacteria 1684
93 Ga0068858_100145946 3300005842 Bacteria 2222
94 Ga0068860_100164575 3300005843 Bacteria 2140
95 Ga0075367_10086487 3300006178 Bacteria 1903
96 Ga0075428_100001406 3300006844 Bacteria 25623
97 Ga0075428_100020160 3300006844 Bacteria 7385
98 Ga0075428_100445326 3300006844 Bacteria 1387
99 Ga0075430_100000633 3300006846 Bacteria 26769
100 Ga0075430_100003001 3300006846 Bacteria 14122
101 Ga0075430_100108039 3300006846 Bacteria 2321
102 Ga0075431_100003570 3300006847 Bacteria 15067
103 Ga0075431_100015575 3300006847 Bacteria 7706
104 Ga0075431_100112467 3300006847 Bacteria 2810
105 Ga0075431_100400865 3300006847 Bacteria 1373
106 Ga0075433_10009992 3300006852 Bacteria 7604
107 Ga0075433_10183097 3300006852 Bacteria 1864
108 Ga0075433_10217962 3300006852 Bacteria 1696
109 Ga0075434_100006188 3300006871 Bacteria 10957
110 Ga0075434_100086967 3300006871 Bacteria 3126
111 Ga0075434_100416413 3300006871 Bacteria 1365
112 Ga0075429_100012474 3300006880 Bacteria 7373
113 Ga0075429_100020565 3300006880 Bacteria 5728
114 Ga0075436_100054141 3300006914 Bacteria 2769
115 Ga0075436_100056279 3300006914 Bacteria 2716
116 Ga0075436_100067954 3300006914 Bacteria 2462
117 Ga0075436_100224792 3300006914 Bacteria 1332
118 Ga0097620_100314206 3300006931 Bacteria 1660
119 Ga0075435_100005662 3300007076 Bacteria 8759
120 Ga0075435_100013010 3300007076 Bacteria 6176
121 Ga0075435_100020760 3300007076 Bacteria 5040
122 Ga0075435_100035544 3300007076 Bacteria 3954
123 Ga0075435_100148193 3300007076 Bacteria 1972
124 Ga0099794_10068788 3300007265 Bacteria 1731
125 Ga0099795_10010036 3300007788 Bacteria 2772
126 Ga0105240_10025423 3300009093 Bacteria 7780
127 Ga0105240_10155883 3300009093 Bacteria 2716
128 Ga0111539_10000322 3300009094 Bacteria 58508
129 Ga0111539_10122865 3300009094 Bacteria 3043
130 Ga0111539_10186244 3300009094 Bacteria 2424
131 Ga0114129_10000592 3300009147 Bacteria 44838
132 Ga0114129_10002607 3300009147 Bacteria 25068
133 Ga0114129_10010081 3300009147 Bacteria 13469
134 Ga0114129_10010440 3300009147 Bacteria 13244
135 Ga0114129_10013744 3300009147 Bacteria 11541
136 Ga0114129_10080282 3300009147 Bacteria 4534
137 Ga0114129_10123794 3300009147 Bacteria 3556
138 Ga0114129_10290175 3300009147 Bacteria 2183
139 Ga0114129_10903473 3300009147 Bacteria 1119
140 Ga0105241_10164337 3300009174 Bacteria 1828
141 Ga0105242_10037899 3300009176 Bacteria 3874
142 Ga0105248_10037166 3300009177 Bacteria 5446
143 Ga0105248_10081621 3300009177 Bacteria 3634
144 Ga0105248_10138828 3300009177 Bacteria 2742
145 Ga0105238_10214807 3300009551 Bacteria 1899
146 Ga0105249_10262233 3300009553 Bacteria 1718
147 Ga0099796_10021393 3300010159 Bacteria 1991
148 Ga0105246_10147505 3300011119 Bacteria 1777
149 Ga0105246_10371365 3300011119 Bacteria 1179
150 Ga0157370_10018371 3300013104 Bacteria 7033
151 Ga0157369_10063493 3300013105 Bacteria 3978
152 Ga0157378_10066584 3300013297 Bacteria 3227
153 Ga0163162_10710607 3300013306 Bacteria 1126
154 Ga0157372_10019643 3300013307 Bacteria 7283
155 Ga0163163_10087220 3300014325 Bacteria 3131
156 Ga0157380_10052547 3300014326 Bacteria 3227
157 Ga0157380_10661648 3300014326 Bacteria 1044
158 Ga0197907_10259726 3300020069 Bacteria 1396
159 Ga0197907_11102202 3300020069 Bacteria 1301
160 Ga0206356_10721252 3300020070 Bacteria 1515
161 Ga0206356_11032134 3300020070 Bacteria 2869
162 Ga0206352_10154373 3300020078 Bacteria 1912
163 Ga0207697_10122008 3300025315 Bacteria 1122
164 Ga0207692_10057955 3300025898 Bacteria 1994
165 Ga0207680_10027942 3300025903 Bacteria 3150
166 Ga0207680_10163083 3300025903 Bacteria 1496
167 Ga0207647_10039906 3300025904 Bacteria 2959
168 Ga0207645_10007477 3300025907 Bacteria 7712
169 Ga0207645_10160471 3300025907 Bacteria 1471
170 Ga0207684_10017771 3300025910 Bacteria 6100
171 Ga0207684_10067629 3300025910 Bacteria 3036
172 Ga0207684_10330854 3300025910 Bacteria 1312
173 Ga0207707_10125259 3300025912 Bacteria 2247
174 Ga0207707_10219442 3300025912 Bacteria 1655
175 Ga0207707_10413186 3300025912 Bacteria 1158
176 Ga0207695_10360111 3300025913 Bacteria 1341
177 Ga0207662_10006064 3300025918 Bacteria 6501
178 Ga0207657_10001666 3300025919 Bacteria 23968
179 Ga0207649_10079253 3300025920 Bacteria 2121
180 Ga0207652_10032779 3300025921 Bacteria 4370
181 Ga0207646_10000005 3300025922 Bacteria 523896
182 Ga0207646_10000165 3300025922 Bacteria 89540
183 Ga0207646_10000790 3300025922 Bacteria 41121
184 Ga0207646_10070813 3300025922 Bacteria 3115
185 Ga0207646_10087322 3300025922 Bacteria 2791
186 Ga0207681_10187351 3300025923 Bacteria 1580
187 Ga0207650_10011366 3300025925 Bacteria 6126
188 Ga0207650_10039769 3300025925 Bacteria 3438
189 Ga0207650_10040972 3300025925 Bacteria 3391
190 Ga0207659_10071980 3300025926 Bacteria 2526
191 Ga0207644_10030218 3300025931 Bacteria 3765
192 Ga0207706_10180766 3300025933 Bacteria 1852
193 Ga0207686_10323365 3300025934 Bacteria 1153
194 Ga0207709_10192875 3300025935 Bacteria 1449
195 Ga0207670_10329695 3300025936 Bacteria 1203
196 Ga0207669_10113870 3300025937 Bacteria 1819
197 Ga0207704_10019703 3300025938 Bacteria 3550
198 Ga0207691_10016698 3300025940 Bacteria 6971
199 Ga0207711_10139200 3300025941 Bacteria 2182
200 Ga0207689_10047141 3300025942 Bacteria 3560
201 Ga0207679_10024840 3300025945 Bacteria 4113
202 Ga0207667_10067127 3300025949 Bacteria 3737
203 Ga0207651_10050149 3300025960 Bacteria 2832
204 Ga0207668_10076454 3300025972 Bacteria 2411
205 Ga0207640_10077901 3300025981 Bacteria 2255
206 Ga0207640_10211190 3300025981 Bacteria 1479
207 Ga0207703_10517728 3300026035 Bacteria 1122
208 Ga0207702_10326376 3300026078 Bacteria 1463
209 Ga0207641_10175016 3300026088 Bacteria 1962
210 Ga0207641_10222753 3300026088 Bacteria 1750
211 Ga0207648_10008329 3300026089 Bacteria 10059
212 Ga0207674_10119802 3300026116 Bacteria 2600
213 Ga0207675_100066773 3300026118 Bacteria 3362
214 Ga0207698_10045851 3300026142 Bacteria 3296
215 Ga0207698_10235526 3300026142 Bacteria 1665
216 Ga0207698_10244215 3300026142 Bacteria 1638
217 Ga0207428_10007005 3300027907 Bacteria 10324
218 Ga0268265_10068080 3300028380 Bacteria 2759
219 Ga0268265_10140893 3300028380 Bacteria 2019
220 Ga0268264_10514978 3300028381 Bacteria 1169
221 Ga0265338_10002594 3300028800 Bacteria 26721
222 Ga0307408_100036551 3300031548 Bacteria 3453
223 Ga0307408_100361159 3300031548 Bacteria 1235
224 Ga0307405_10060116 3300031731 Bacteria 2397
225 Ga0307406_10036710 3300031901 Bacteria 3021
226 Ga0307412_10053602 3300031911 Bacteria 2674
227 Ga0307412_10066645 3300031911 Bacteria 2441
228 Ga0307416_100005122 3300032002 Bacteria 8003
229 Ga0307416_100710704 3300032002 Bacteria 1095
230 Ga0307411_10067354 3300032005 Bacteria 2409
231 Ga0307411_10107201 3300032005 Bacteria 1990
232 Ga0373942_0030399 3300035207 Bacteria 1423
233 Ga0373961_0000548 3300035241 Bacteria 14262
234 Ga0373925_0235592 3300037068 Bacteria 1465
235 Ga0395900_0209500 3300037418 Bacteria 1969
236 Ga0395901_0262143 3300038443 Bacteria 1799
237 Ga0436361_0676432 3300039447 Bacteria 5454
238 Ga0436363_1389296 3300039450 Bacteria 1582
239 Ga0451793_0521326 3300041452 Bacteria 1672
240 Ga0439450_001725 3300042008 Bacteria 3266
241 Ga0439435_0009113 3300042436 Bacteria 2322
242 Ga0451577_0041107 3300042876 Bacteria 4151
243 Ga0453683_0001129 3300044673 Bacteria 24346
244 Ga0453683_0005074 3300044673 Bacteria 9238
245 Ga0453683_0007585 3300044673 Bacteria 7350
246 Ga0453683_0062262 3300044673 Bacteria 2333
247 Ga0453683_0070641 3300044673 Bacteria 2184
248 Ga0453683_0137759 3300044673 Bacteria 1539
249 Ga0453683_0165165 3300044673 Bacteria 1401
250 Ga0453683_0218329 3300044673 Bacteria 1212
251 Ga0453684_0028090 3300044712 Bacteria 8042
252 Ga0453684_0416100 3300044712 Bacteria 1502
253 Ga0451576_0027697 3300045051 Bacteria 6084
254 Ga0451576_0230192 3300045051 Bacteria 1936
255 Ga0451576_0588509 3300045051 Bacteria 1169
256 Ga0495662_0056700 3300046476 Bacteria 1892
257 Ga0495606_0096600 3300046507 Bacteria 1807
258 Ga0495618_0062580 3300046514 Bacteria 2362
259 Ga0495618_0096502 3300046514 Bacteria 1891
260 Ga0495628_0377854 3300046516 Bacteria 1038
261 Ga0495640_0066219 3300046533 Bacteria 2437
262 Ga0495645_0356031 3300046543 Bacteria 942
263 Ga0495667_0038713 3300046559 Bacteria 3175
264 Ga0495646_0137080 3300046680 Bacteria 1372
265 Ga0495658_0083890 3300046683 Bacteria 1875
266 Ga0495613_0183796 3300046689 Bacteria 1480
267 Ga0495613_0327825 3300046689 Bacteria 1056
268 Ga0495600_0034363 3300046809 Bacteria 3291
269 Ga0495604_0005211 3300047317 Bacteria 10300
270 Ga0495674_0003053 3300047319 Bacteria 16284
271 Ga0495684_0004846 3300047471 Bacteria 10498
272 Ga0495684_0207145 3300047471 Bacteria 1443
273 Ga0496102_0051896 3300048905 Bacteria 3736
274 Ga0496103_0152037 3300048906 Bacteria 1483
275 Ga0496106_0061239 3300048909 Bacteria 2855
276 Ga0496106_0077509 3300048909 Bacteria 2549
277 Ga0496113_0152505 3300048916 Bacteria 1824
278 Ga0501291_012988 3300049514 Bacteria 1226
279 Ga0501298_010298 3300049521 Bacteria 1607
280 Ga0501299_000760 3300049522 Bacteria 3919
281 Ga0501040_0001008 3300049576 Bacteria 17877
282 Ga0501041_0018552 3300049577 Bacteria 4144
283 Ga0501042_0063358 3300049578 Bacteria 2642
284 Ga0501043_0158552 3300049579 Bacteria 1769
285 Ga0501048_0062227 3300049582 Bacteria 2642
286 Ga0501072_0068879 3300049588 Bacteria 2793
287 Ga0501075_0000487 3300049591 Bacteria 23717
288 Ga0501076_0248378 3300049592 Bacteria 1456
289 Ga0501077_0017496 3300049593 Bacteria 4526
290 Ga0501216_002920 3300049660 Bacteria 2462
291 Ga0501217_003839 3300049661 Bacteria 3057
292 Ga0501257_044954 3300049686 Bacteria 1091
293 Ga0501234_013995 3300049707 Bacteria 1259
294 Ga0501079_0076959 3300049741 Bacteria 2580
295 Ga0501080_0079292 3300049742 Bacteria 3053
296 Ga0501083_0026356 3300049744 Bacteria 4017
297 Ga0501045_0003420 3300049824 Bacteria 10862
298 nmdc:mga05p37_1363_c1 3300050507 Bacteria 28411
299 nmdc:mga05p37_28078_c1 3300050507 Bacteria 6857
300 nmdc:mga05p37_3776_c1 3300050507 Bacteria 17724
301 nmdc:mga05p37_43074_c1 3300050507 Bacteria 5551
302 nmdc:mga05p37_44179_c1 3300050507 Bacteria 5482
303 nmdc:mga05p37_600039_c1 3300050507 Bacteria 1243
304 nmdc:mga05p37_61978_c1 3300050507 Bacteria 4603
305 nmdc:mga09592_24995_c1 3300050508 Bacteria 4941
306 nmdc:mga0qj67_12897_c1 3300050509 Bacteria 6306
307 nmdc:mga0qj67_216801_c1 3300050509 Bacteria 1554
308 nmdc:mga0qj67_8326_c1 3300050509 Bacteria 7687
309 nmdc:mga06r32_38844_c1 3300050510 Bacteria 4513
310 nmdc:mga06r32_5893_c1 3300050510 Bacteria 11030
311 nmdc:mga08y16_2164_c1 3300050511 Bacteria 20147
312 nmdc:mga08y16_315882_c1 3300050511 Bacteria 1609
313 nmdc:mga08y16_671996_c1 3300050511 Bacteria 1038
314 nmdc:mga0n895_401061_c1 3300050512 Bacteria 1387
315 nmdc:mga0n895_417158_c1 3300050512 Bacteria 1357
316 nmdc:mga0n895_9161_c1 3300050512 Bacteria 8643
317 nmdc:mga0rr50_147031_c1 3300050513 Bacteria 1901
318 nmdc:mga0rr50_20781_c1 3300050513 Bacteria 4467
319 nmdc:mga0rr50_32001_c1 3300050513 Bacteria 3742
320 nmdc:mga0rr50_35193_c1 3300050513 Bacteria 3595
321 nmdc:mga0rr50_3709_c1 3300050513 Bacteria 8850
322 nmdc:mga0rr50_534703_c1 3300050513 Bacteria 998
323 nmdc:mga08x19_13148_c1 3300050514 Bacteria 4999
324 nmdc:mga0a205_155529_c1 3300050515 Bacteria 2185
325 nmdc:mga0a205_166519_c1 3300050515 Bacteria 2100
326 nmdc:mga0a205_18765_c1 3300050515 Bacteria 6510
327 nmdc:mga0a205_248523_c1 3300050515 Bacteria 1659
328 nmdc:mga0a205_473009_c1 3300050515 Bacteria 1112
329 nmdc:mga0a205_85312_c1 3300050515 Bacteria 3050
330 Ga0501082_0032273 3300060353 Bacteria 4516
331 Ga0307411_10025674
332 Ga0058863_11874132
333 Ga0058861_10098190
334 Ga0058862_10078591
335 Ga0058862_12590544
336 Ga0065715_10007127
337 Ga0065707_10086232
338 Ga0070676_10202446
339 Ga0070690_100013165
340 Ga0070690_100030270
341 Ga0070670_100026109
342 Ga0070670_100028529
343 Ga0070670_100089558
344 Ga0068869_100100244
345 Ga0070666_10006009
346 Ga0070666_10020571
347 Ga0068868_100417018
348 Ga0068868_100511989
349 Ga0070660_100012685
350 Ga0070689_100184451
351 Ga0070687_100003406
352 Ga0070687_100015861
353 Ga0070692_10126466
354 Ga0070668_100230512
355 Ga0070669_100050967
356 Ga0070671_100216862
357 Ga0070674_100117407
358 Ga0070673_100014830
359 Ga0070673_100043722
360 Ga0070673_100275097
361 Ga0070688_100159776
362 Ga0070659_100028406
363 Ga0070659_100077720
364 Ga0070713_100243298
365 Ga0070713_100482897
366 Ga0070710_10053529
367 Ga0070701_10106938
368 Ga0070705_100064136
369 Ga0070694_100037800
370 Ga0070694_100057888
371 Ga0070708_100015643
372 Ga0070708_100119049
373 Ga0070708_100245526
374 Ga0070678_100373480
375 Ga0070662_100197151
376 Ga0070681_10102457
377 Ga0070681_10334528
378 Ga0068867_100033582
379 Ga0070706_100003813
380 Ga0070706_100040168
381 Ga0070706_100178316
382 Ga0070707_100000674
383 Ga0070707_100001860
384 Ga0070707_100055189
385 Ga0070707_100101036
386 Ga0070707_100171730
387 Ga0070707_100210323
388 Ga0070707_100262292
389 Ga0070698_100005849
390 Ga0070698_100043223
391 Ga0070698_100072653
392 Ga0070698_100123438
393 Ga0070699_100093738
394 Ga0070699_100101784
395 Ga0070699_100172658
396 Ga0070679_100021635
397 Ga0070679_100058976
398 Ga0070697_100038221
399 Ga0070697_100062407
400 Ga0070697_100091803
401 Ga0070697_100534865
402 Ga0070697_100588155
403 Ga0070672_100061352
404 Ga0070686_100001146
405 Ga0070695_100049651
406 Ga0070696_100024140
407 Ga0070693_100032036
408 Ga0070704_100019825
409 Ga0070704_100064518
410 Ga0068855_100027848
411 Ga0068855_100099534
412 Ga0068855_100265757
413 Ga0070664_100004735
414 Ga0068857_100501588
415 Ga0068854_100103184
416 Ga0068856_100209633
417 Ga0068852_100097771
418 Ga0068852_100293432
419 Ga0068859_100314193
420 Ga0068864_100074324
421 Ga0068861_100109024
422 Ga0068861_100198157
423 Ga0068858_100145946
424 Ga0068860_100164575
425 Ga0075367_10086487
426 Ga0075428_100001406
427 Ga0075428_100020160
428 Ga0075428_100445326
429 Ga0075430_100000633
430 Ga0075430_100003001
431 Ga0075430_100108039
432 Ga0075431_100003570
433 Ga0075431_100015575
434 Ga0075431_100112467
435 Ga0075431_100400865
436 Ga0075433_10009992
437 Ga0075433_10183097
438 Ga0075433_10217962
439 Ga0075434_100006188
440 Ga0075434_100086967
441 Ga0075434_100416413
442 Ga0075429_100012474
443 Ga0075429_100020565
444 Ga0075436_100054141
445 Ga0075436_100056279
446 Ga0075436_100067954
447 Ga0075436_100224792
448 Ga0097620_100314206
449 Ga0075435_100005662
450 Ga0075435_100013010
451 Ga0075435_100020760
452 Ga0075435_100035544
453 Ga0075435_100148193
454 Ga0099794_10068788
455 Ga0099795_10010036
456 Ga0105240_10025423
457 Ga0105240_10155883
458 Ga0111539_10000322
459 Ga0111539_10122865
460 Ga0111539_10186244
461 Ga0114129_10000592
462 Ga0114129_10002607
463 Ga0114129_10010081
464 Ga0114129_10010440
465 Ga0114129_10013744
466 Ga0114129_10080282
467 Ga0114129_10123794
468 Ga0114129_10290175
469 Ga0114129_10903473
470 Ga0105241_10164337
471 Ga0105242_10037899
472 Ga0105248_10037166
473 Ga0105248_10081621
474 Ga0105248_10138828
475 Ga0105238_10214807
476 Ga0105249_10262233
477 Ga0099796_10021393
478 Ga0105246_10147505
479 Ga0105246_10371365
480 Ga0157370_10018371
481 Ga0157369_10063493
482 Ga0157378_10066584
483 Ga0163162_10710607
484 Ga0157372_10019643
485 Ga0163163_10087220
486 Ga0157380_10052547
487 Ga0157380_10661648
488 Ga0197907_10259726
489 Ga0197907_11102202
490 Ga0206356_10721252
491 Ga0206356_11032134
492 Ga0206352_10154373
493 Ga0207697_10122008
494 Ga0207692_10057955
495 Ga0207680_10027942
496 Ga0207680_10163083
497 Ga0207647_10039906
498 Ga0207645_10007477
499 Ga0207645_10160471
500 Ga0207684_10017771
501 Ga0207684_10067629
502 Ga0207684_10330854
503 Ga0207707_10125259
504 Ga0207707_10219442
505 Ga0207707_10413186
506 Ga0207695_10360111
507 Ga0207662_10006064
508 Ga0207657_10001666
509 Ga0207649_10079253
510 Ga0207652_10032779
511 Ga0207646_10000005
512 Ga0207646_10000165
513 Ga0207646_10000790
514 Ga0207646_10070813
515 Ga0207646_10087322
516 Ga0207681_10187351
517 Ga0207650_10011366
518 Ga0207650_10039769
519 Ga0207650_10040972
520 Ga0207659_10071980
521 Ga0207644_10030218
522 Ga0207706_10180766
523 Ga0207686_10323365
524 Ga0207709_10192875
525 Ga0207670_10329695
526 Ga0207669_10113870
527 Ga0207704_10019703
528 Ga0207691_10016698
529 Ga0207711_10139200
530 Ga0207689_10047141
531 Ga0207679_10024840
532 Ga0207667_10067127
533 Ga0207651_10050149
534 Ga0207668_10076454
535 Ga0207640_10077901
536 Ga0207640_10211190
537 Ga0207703_10517728
538 Ga0207702_10326376
539 Ga0207641_10175016
540 Ga0207641_10222753
541 Ga0207648_10008329
542 Ga0207674_10119802
543 Ga0207675_100066773
544 Ga0207698_10045851
545 Ga0207698_10235526
546 Ga0207698_10244215
547 Ga0207428_10007005
548 Ga0268265_10068080
549 Ga0268265_10140893
550 Ga0268264_10514978
551 Ga0265338_10002594
552 Ga0307408_100036551
553 Ga0307408_100361159
554 Ga0307405_10060116
555 Ga0307406_10036710
556 Ga0307412_10053602
557 Ga0307412_10066645
558 Ga0307416_100005122
559 Ga0307416_100710704
560 Ga0307411_10067354
561 Ga0307411_10107201
562 Ga0373942_0030399
563 Ga0373961_0000548
564 Ga0373925_0235592
565 Ga0395900_0209500
566 Ga0395901_0262143
567 Ga0436361_0676432
568 Ga0436363_1389296
569 Ga0451793_0521326
570 Ga0439450_001725
571 Ga0439435_0009113
572 Ga0451577_0041107
573 Ga0453683_0001129
574 Ga0453683_0005074
575 Ga0453683_0007585
576 Ga0453683_0062262
577 Ga0453683_0070641
578 Ga0453683_0137759
579 Ga0453683_0165165
580 Ga0453683_0218329
581 Ga0453684_0028090
582 Ga0453684_0416100
583 Ga0451576_0027697
584 Ga0451576_0230192
585 Ga0451576_0588509
586 Ga0495662_0056700
587 Ga0495606_0096600
588 Ga0495618_0062580
589 Ga0495618_0096502
590 Ga0495628_0377854
591 Ga0495640_0066219
592 Ga0495645_0356031
593 Ga0495667_0038713
594 Ga0495646_0137080
595 Ga0495658_0083890
596 Ga0495613_0183796
597 Ga0495613_0327825
598 Ga0495600_0034363
599 Ga0495604_0005211
600 Ga0495674_0003053
601 Ga0495684_0004846
602 Ga0495684_0207145
603 Ga0496102_0051896
604 Ga0496103_0152037
605 Ga0496106_0061239
606 Ga0496106_0077509
607 Ga0496113_0152505
608 Ga0501291_012988
609 Ga0501298_010298
610 Ga0501299_000760
611 Ga0501040_0001008
612 Ga0501041_0018552
613 Ga0501042_0063358
614 Ga0501043_0158552
615 Ga0501048_0062227
616 Ga0501072_0068879
617 Ga0501075_0000487
618 Ga0501076_0248378
619 Ga0501077_0017496
620 Ga0501216_002920
621 Ga0501217_003839
622 Ga0501257_044954
623 Ga0501234_013995
624 Ga0501079_0076959
625 Ga0501080_0079292
626 Ga0501083_0026356
627 Ga0501045_0003420
628 nmdc:mga05p37_1363_c1
629 nmdc:mga05p37_28078_c1
630 nmdc:mga05p37_3776_c1
631 nmdc:mga05p37_43074_c1
632 nmdc:mga05p37_44179_c1
633 nmdc:mga05p37_600039_c1
634 nmdc:mga05p37_61978_c1
635 nmdc:mga09592_24995_c1
636 nmdc:mga0qj67_12897_c1
637 nmdc:mga0qj67_216801_c1
638 nmdc:mga0qj67_8326_c1
639 nmdc:mga06r32_38844_c1
640 nmdc:mga06r32_5893_c1
641 nmdc:mga08y16_2164_c1
642 nmdc:mga08y16_315882_c1
643 nmdc:mga08y16_671996_c1
644 nmdc:mga0n895_401061_c1
645 nmdc:mga0n895_417158_c1
646 nmdc:mga0n895_9161_c1
647 nmdc:mga0rr50_147031_c1
648 nmdc:mga0rr50_20781_c1
649 nmdc:mga0rr50_32001_c1
650 nmdc:mga0rr50_35193_c1
651 nmdc:mga0rr50_3709_c1
652 nmdc:mga0rr50_534703_c1
653 nmdc:mga08x19_13148_c1
654 nmdc:mga0a205_155529_c1
655 nmdc:mga0a205_166519_c1
656 nmdc:mga0a205_18765_c1
657 nmdc:mga0a205_248523_c1
658 nmdc:mga0a205_473009_c1
659 nmdc:mga0a205_85312_c1
660 Ga0501082_0032273

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13247

Fer4_11

4Fe-4S dicluster domain

87

185

0.95

PF12838

Fer4_7

4Fe-4S dicluster domain

34

113

0.94

PF09163

Form-deh_trans

Formate dehydrogenase N, transmembrane

241

283

0.93

PF12837

Fer4_6

4Fe-4S binding domain

121

144

0.92

PF00037

Fer4

4Fe-4S binding domain

122

145

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
8bqk-assembly1.cif.gz_B w-formate dehydrogenase from desulfovibrio vulgaris - soaking with formate 22 min 0.8216 29 238
1kqf-assembly1.cif.gz_B formate dehydrogenase n from e. coli 0.8164 5 285
1h0h-assembly2.cif.gz_L tungsten containing formate dehydrogenase from desulfovibrio gigas 0.806 29 238
8bqk-assembly1.cif.gz_B w-formate dehydrogenase from desulfovibrio vulgaris - soaking with formate 22 min 0.7941 29 238
1kqf-assembly1.cif.gz_B formate dehydrogenase n from e. coli 0.7905 5 285
ID Description Score Start End Superfamily
1kqgB01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8951 100 162 3.30.70.20
2vpwB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8546 106 159 3.30.70.20
2vpwB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8409 106 159 3.30.70.20
1kqgB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8144 28 229 3.30.70.20
1kqgB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8038 28 229 3.30.70.20
ID Description Score Start End GO Terms
AF-A0A378EHB2-F1-model_v4 deleted 0.9088 101 255
AF-A0A316XKB8-F1-model_v4 deleted 0.9022 84 247
AF-A0A377LQA2-F1-model_v4 Formate dehydrogenase subunit beta (EC 1.17.1.9) 0.9013 80 231 GO:0008863
GO:0030313
GO:0046872
GO:0051539
AF-A0A6N6X763-F1-model_v4 deleted 0.8991 76 238
AF-A0A418H9E5-F1-model_v4 deleted 0.8985 70 240

Map