F410567

General Info

Members Datasets Scaffolds Average Seq Length
331 184 662 206

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100516722|Ga0307416_1005167222
Length 218
Sequence MSIPQTGYDVATIRCQRIHEEQNALWLRAAARHAGGMTTHTTSERIEDELVRRLMHQRIIVLGEEADISIWINSPGGSVSAMLAIHDVMRLIPNDVSTLAMGMAASAGQFLLSAGTPGKRYALPHSRVLLHQGSAGIGGTAVDIEIQADDLRHTRDTVLGLVAEHTGQDRDTVERDSRRDRWFSAEQALAYGFVDQVISSIDHVTPGRTRPVGLAGVR

Samples

Sample ID Description Type Environment
1 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
70 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
71 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
80 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
84 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
85 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
86 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
87 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
88 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
89 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
90 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
91 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
92 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
93 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
94 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
95 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
96 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
97 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
100 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
101 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
102 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
111 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
112 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
115 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
116 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
122 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
123 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
124 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
125 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
134 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
154 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
155 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
156 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
157 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
160 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
161 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
162 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
170 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
171 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
176 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
177 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
178 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
180 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
181 2643221641 Nocardioides sp. Root122 Isolate Unclassified
182 2739367898 Nocardioides sp. CF479 Isolate Unclassified
183 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
184 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.49
Metatranscriptomes 0.3
Isolates 1.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.63
Nodule 0.3
Rhizoplane 24.47
Rhizosphere 62.84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307416_100516722 3300032002 Bacteria 1262
2 JGI24737J22298_10041324 3300001990 Bacteria 1414
3 JGI25154J39366_1001427 3300002738 Bacteria 8496
4 Ga0070658_10071535 3300005327 Bacteria 2841
5 Ga0070683_100010145 3300005329 Bacteria 8085
6 Ga0070683_100010340 3300005329 Bacteria 8025
7 Ga0070683_100283258 3300005329 Bacteria 1577
8 Ga0070683_100906016 3300005329 Bacteria 846
9 Ga0070680_100167330 3300005336 Bacteria 1849
10 Ga0070682_100037415 3300005337 Bacteria 2971
11 Ga0070682_100415770 3300005337 Bacteria 1021
12 Ga0070668_100131833 3300005347 Bacteria 2006
13 Ga0070714_100497352 3300005435 Bacteria 1162
14 Ga0070678_100101165 3300005456 Bacteria 2234
15 Ga0070662_100528806 3300005457 Bacteria 986
16 Ga0070679_100207031 3300005530 Bacteria 1926
17 Ga0070684_100081338 3300005535 Bacteria 2866
18 Ga0070684_100244679 3300005535 Bacteria 1639
19 Ga0070686_100430496 3300005544 Bacteria 1010
20 Ga0070693_100019231 3300005547 Bacteria 3577
21 Ga0070665_100002422 3300005548 Bacteria 20575
22 Ga0070665_100113071 3300005548 Bacteria 2718
23 Ga0070664_100442018 3300005564 Bacteria 1193
24 Ga0068857_100022508 3300005577 Bacteria 5546
25 Ga0068856_100030785 3300005614 Bacteria 5248
26 Ga0068852_100268677 3300005616 Bacteria 1640
27 Ga0068861_100397455 3300005719 Bacteria 1222
28 Ga0068863_100235973 3300005841 Bacteria 1765
29 Ga0068860_100029471 3300005843 Bacteria 5280
30 Ga0081455_10016697 3300005937 Bacteria 7072
31 Ga0075364_10000664 3300006051 Bacteria 17846
32 Ga0075364_10225654 3300006051 Bacteria 1272
33 Ga0075367_10055835 3300006178 Bacteria 2345
34 Ga0075367_10134111 3300006178 Bacteria 1532
35 Ga0075430_100003669 3300006846 Bacteria 12882
36 Ga0075431_100276012 3300006847 Bacteria 1702
37 Ga0075429_100070469 3300006880 Bacteria 3044
38 Ga0068865_100123106 3300006881 Bacteria 1932
39 Ga0068865_100280177 3300006881 Bacteria 1327
40 Ga0105245_10005997 3300009098 Bacteria 10682
41 Ga0114129_10212013 3300009147 Bacteria 2618
42 Ga0105243_10459902 3300009148 Bacteria 1196
43 Ga0105242_10238500 3300009176 Bacteria 1634
44 Ga0105248_10785161 3300009177 Bacteria 1075
45 Ga0105237_10125499 3300009545 Bacteria 2561
46 Ga0105237_10134691 3300009545 Bacteria 2465
47 Ga0105249_10417033 3300009553 Bacteria 1376
48 Ga0105239_10001986 3300010375 Bacteria 26599
49 Ga0105246_10054758 3300011119 Bacteria 2750
50 Ga0105246_10822924 3300011119 Bacteria 826
51 Ga0157369_10014355 3300013105 Bacteria 8944
52 Ga0157369_10390307 3300013105 Bacteria 1444
53 Ga0163162_10077021 3300013306 Bacteria 3398
54 Ga0163162_10096213 3300013306 Bacteria 3049
55 Ga0157372_10011980 3300013307 Bacteria 9237
56 Ga0157372_10045549 3300013307 Bacteria 4867
57 Ga0157375_10110976 3300013308 Bacteria 2841
58 Ga0157375_10228347 3300013308 Bacteria 2020
59 Ga0157375_10568607 3300013308 Bacteria 1294
60 Ga0157375_10644251 3300013308 Bacteria 1216
61 Ga0163163_10241567 3300014325 Bacteria 1856
62 Ga0157380_10002039 3300014326 Bacteria 13514
63 Ga0157380_10638382 3300014326 Bacteria 1060
64 Ga0182006_1133551 3300015261 Bacteria 852
65 Ga0163161_10336078 3300017792 Bacteria 1197
66 Ga0206353_10576656 3300020082 Bacteria 946
67 Ga0213876_10143668 3300021384 Bacteria 1269
68 Ga0209646_1000030 3300025246 Bacteria 384216
69 Ga0207671_10128793 3300025914 Bacteria 1941
70 Ga0207657_10385166 3300025919 Bacteria 1104
71 Ga0207690_10301206 3300025932 Bacteria 1254
72 Ga0207706_10379106 3300025933 Bacteria 1227
73 Ga0207709_10026043 3300025935 Bacteria 3355
74 Ga0207704_10100433 3300025938 Bacteria 1927
75 Ga0207704_10182823 3300025938 Bacteria 1517
76 Ga0207661_10313268 3300025944 Bacteria 1409
77 Ga0207679_10036172 3300025945 Bacteria 3500
78 Ga0207668_10238022 3300025972 Bacteria 1471
79 Ga0207658_10168413 3300025986 Bacteria 1802
80 Ga0207702_10287648 3300026078 Bacteria 1556
81 Ga0207676_10131127 3300026095 Bacteria 2131
82 Ga0207674_10010116 3300026116 Bacteria 10724
83 Ga0207683_10127363 3300026121 Bacteria 2289
84 Ga0207698_11014084 3300026142 Bacteria 841
85 Ga0209813_10048560 3300027866 Bacteria 1318
86 Ga0268266_10002026 3300028379 Bacteria 22552
87 Ga0268264_10020318 3300028381 Bacteria 5427
88 Ga0316183_1199241 3300030742 Bacteria 812
89 Ga0316181_1172080 3300030744 Bacteria 887
90 Ga0316182_1431578 3300030745 Bacteria 787
91 Ga0307408_100675685 3300031548 Bacteria 926
92 Ga0307405_10732517 3300031731 Bacteria 822
93 Ga0307406_10227423 3300031901 Bacteria 1391
94 Ga0307406_10251737 3300031901 Bacteria 1331
95 Ga0307407_10597009 3300031903 Bacteria 822
96 Ga0307412_10190587 3300031911 Bacteria 1550
97 Ga0307412_10247620 3300031911 Bacteria 1382
98 Ga0307409_100053231 3300031995 Bacteria 3109
99 Ga0307409_100340350 3300031995 Bacteria 1411
100 Ga0307409_100778186 3300031995 Bacteria 963
101 Ga0307414_10331579 3300032004 Bacteria 1299
102 Ga0307411_10163965 3300032005 Bacteria 1668
103 Ga0373944_0169051 3300035089 Bacteria 779
104 Ga0395898_0044143 3300037466 Bacteria 4391
105 Ga0436365_0806228 3300039437 Bacteria 1980
106 Ga0439465_0028732 3300041413 Bacteria 1765
107 Ga0451789_0535389 3300041443 Bacteria 884
108 Ga0451791_0742786 3300041451 Bacteria 1868
109 Ga0451791_1070418 3300041451 Bacteria 924
110 Ga0451793_0539376 3300041452 Bacteria 836
111 Ga0451793_1398327 3300041452 Bacteria 3857
112 Ga0451797_0214625 3300041453 Bacteria 1113
113 Ga0451797_0811827 3300041453 Bacteria 1523
114 Ga0451833_1233965 3300041491 Bacteria 2106
115 Ga0451837_0544041 3300041494 Bacteria 1107
116 Ga0451839_1424361 3300041496 Bacteria 1523
117 Ga0451841_0379531 3300041498 Bacteria 1430
118 Ga0451843_0672359 3300041509 Bacteria 2404
119 Ga0451853_1590311 3300041512 Bacteria 943
120 Ga0451853_2059396 3300041512 Bacteria 1808
121 Ga0439454_035584 3300042011 Bacteria 798
122 Ga0466972_0032066 3300044658 Bacteria 2581
123 Ga0466972_0046449 3300044658 Bacteria 2102
124 Ga0466972_0065079 3300044658 Bacteria 1744
125 Ga0466965_0017239 3300044683 Bacteria 3450
126 Ga0466965_0023810 3300044683 Bacteria 2958
127 Ga0466961_0030608 3300044693 Bacteria 3459
128 Ga0466963_0016610 3300044694 Bacteria 4580
129 Ga0466963_0208892 3300044694 Bacteria 1366
130 Ga0466963_0407726 3300044694 Bacteria 958
131 Ga0466964_0023554 3300044706 Bacteria 2394
132 Ga0466964_0036259 3300044706 Bacteria 1977
133 Ga0466971_0092119 3300044719 Bacteria 1388
134 Ga0466971_0170592 3300044719 Bacteria 1021
135 Ga0466968_0127770 3300044735 Bacteria 1154
136 Ga0466970_0002194 3300044765 Bacteria 9437
137 Ga0466970_0031194 3300044765 Bacteria 2814
138 Ga0466970_0056322 3300044765 Bacteria 2101
139 Ga0466970_0119689 3300044765 Bacteria 1442
140 Ga0466957_0108438 3300044842 Bacteria 1758
141 Ga0466957_0143092 3300044842 Bacteria 1542
142 Ga0466960_0019505 3300044901 Bacteria 2990
143 Ga0451576_0077062 3300045051 Bacteria 3470
144 Ga0466958_0103401 3300045836 Bacteria 1773
145 Ga0466967_0060402 3300045976 Bacteria 3358
146 Ga0466967_0063106 3300045976 Bacteria 3291
147 Ga0466967_0109181 3300045976 Bacteria 2540
148 Ga0466967_0314368 3300045976 Bacteria 1509
149 Ga0466967_0380650 3300045976 Bacteria 1370
150 Ga0466967_0538912 3300045976 Bacteria 1148
151 Ga0466967_0710762 3300045976 Bacteria 996
152 Ga0495627_000842 3300046453 Bacteria 22034
153 Ga0495629_0211529 3300046459 Bacteria 1339
154 Ga0495638_0045786 3300046460 Bacteria 2751
155 Ga0495639_0106551 3300046475 Bacteria 1327
156 Ga0495608_0072320 3300046511 Bacteria 2250
157 Ga0495608_0129994 3300046511 Bacteria 1612
158 Ga0495645_0066754 3300046543 Bacteria 2599
159 Ga0495667_0146106 3300046559 Bacteria 1523
160 Ga0495676_0408995 3300047321 Bacteria 899
161 Ga0496100_0066320 3300048903 Bacteria 2394
162 Ga0496100_0074347 3300048903 Bacteria 2276
163 Ga0496100_0429858 3300048903 Bacteria 1010
164 Ga0496101_0019983 3300048904 Bacteria 4580
165 Ga0496101_0270299 3300048904 Bacteria 1327
166 Ga0496101_0348023 3300048904 Bacteria 1164
167 Ga0496102_0006495 3300048905 Bacteria 9971
168 Ga0496102_0008218 3300048905 Bacteria 8932
169 Ga0496102_0069334 3300048905 Bacteria 3237
170 Ga0496102_0224981 3300048905 Bacteria 1769
171 Ga0496102_0355276 3300048905 Bacteria 1380
172 Ga0496102_0486487 3300048905 Bacteria 1156
173 Ga0496102_0881740 3300048905 Bacteria 817
174 Ga0496102_1039545 3300048905 Bacteria 739
175 Ga0496103_0042362 3300048906 Bacteria 2801
176 Ga0496103_0049663 3300048906 Bacteria 2594
177 Ga0496103_0117500 3300048906 Bacteria 1693
178 Ga0496103_0273549 3300048906 Bacteria 1087
179 Ga0496104_0034443 3300048907 Bacteria 4722
180 Ga0496104_0265641 3300048907 Bacteria 1628
181 Ga0496104_0389514 3300048907 Bacteria 1306
182 Ga0496104_0733754 3300048907 Bacteria 895
183 Ga0496105_0031307 3300048908 Bacteria 4362
184 Ga0496105_0031610 3300048908 Bacteria 4340
185 Ga0496105_0070497 3300048908 Bacteria 2889
186 Ga0496105_0128410 3300048908 Bacteria 2090
187 Ga0496105_0153603 3300048908 Bacteria 1891
188 Ga0496105_0420329 3300048908 Bacteria 1058
189 Ga0496106_0178651 3300048909 Bacteria 1684
190 Ga0496106_0250754 3300048909 Bacteria 1415
191 Ga0496106_0671538 3300048909 Bacteria 827
192 Ga0496107_0127754 3300048910 Bacteria 1875
193 Ga0496107_0169504 3300048910 Bacteria 1620
194 Ga0496107_0182887 3300048910 Bacteria 1556
195 Ga0496107_0327771 3300048910 Bacteria 1139
196 Ga0496108_0100234 3300048911 Bacteria 2470
197 Ga0496108_0285651 3300048911 Bacteria 1436
198 Ga0496108_0636195 3300048911 Bacteria 928
199 Ga0496108_0680080 3300048911 Bacteria 893
200 Ga0496109_0009202 3300048912 Bacteria 8414
201 Ga0496109_0068367 3300048912 Bacteria 3257
202 Ga0496109_0106203 3300048912 Bacteria 2608
203 Ga0496109_0189707 3300048912 Bacteria 1931
204 Ga0496109_0454245 3300048912 Bacteria 1210
205 Ga0496110_0196666 3300048913 Bacteria 1831
206 Ga0496110_0230330 3300048913 Bacteria 1685
207 Ga0496110_0259721 3300048913 Bacteria 1581
208 Ga0496110_0408929 3300048913 Bacteria 1237
209 Ga0496111_0025695 3300048914 Bacteria 4155
210 Ga0496111_0069121 3300048914 Bacteria 2568
211 Ga0496111_0080219 3300048914 Bacteria 2381
212 Ga0496111_0258615 3300048914 Bacteria 1292
213 Ga0496112_0173630 3300048915 Bacteria 2121
214 Ga0496112_0178020 3300048915 Bacteria 2091
215 Ga0496112_0445291 3300048915 Bacteria 1233
216 Ga0496112_0465773 3300048915 Bacteria 1201
217 Ga0496112_0908618 3300048915 Bacteria 802
218 Ga0496113_0037270 3300048916 Bacteria 3567
219 Ga0496113_0125636 3300048916 Bacteria 2008
220 Ga0496113_0192889 3300048916 Bacteria 1617
221 Ga0496113_0777780 3300048916 Bacteria 761
222 Ga0496114_0004467 3300048917 Bacteria 10856
223 Ga0496114_0014263 3300048917 Bacteria 6375
224 Ga0496114_0020651 3300048917 Bacteria 5346
225 Ga0496114_0038805 3300048917 Bacteria 3941
226 Ga0496114_0051791 3300048917 Bacteria 3418
227 Ga0496114_0078599 3300048917 Bacteria 2783
228 Ga0496114_0092838 3300048917 Bacteria 2565
229 Ga0496114_0244787 3300048917 Bacteria 1577
230 Ga0496115_0018894 3300048918 Bacteria 5300
231 Ga0496115_0037151 3300048918 Bacteria 3859
232 Ga0496115_0135636 3300048918 Bacteria 2029
233 Ga0496115_0160871 3300048918 Bacteria 1855
234 Ga0496115_0209403 3300048918 Bacteria 1610
235 Ga0496117_0009170 3300048920 Bacteria 9272
236 Ga0496118_0080875 3300048921 Bacteria 2284
237 Ga0496119_0002632 3300048922 Bacteria 19477
238 Ga0496119_0042518 3300048922 Bacteria 2880
239 Ga0496119_0156727 3300048922 Bacteria 1215
240 Ga0496119_0205610 3300048922 Bacteria 1016
241 Ga0496121_0432040 3300048924 Bacteria 854
242 Ga0496122_0011210 3300048925 Bacteria 9115
243 Ga0496122_0088725 3300048925 Bacteria 2118
244 Ga0496122_0089404 3300048925 Bacteria 2106
245 Ga0496124_0012713 3300048927 Bacteria 8277
246 Ga0496125_0000316 3300048928 Bacteria 94359
247 Ga0496126_0001804 3300048929 Bacteria 31365
248 Ga0496126_0045752 3300048929 Bacteria 4020
249 Ga0496126_0098143 3300048929 Bacteria 2567
250 Ga0496126_0303157 3300048929 Bacteria 1317
251 Ga0501031_0079706 3300049568 Bacteria 2134
252 Ga0501031_0151602 3300049568 Bacteria 1515
253 Ga0501032_0002082 3300049569 Bacteria 15791
254 Ga0501032_0513657 3300049569 Bacteria 765
255 Ga0501033_0002503 3300049570 Bacteria 15572
256 Ga0501034_0001664 3300049571 Bacteria 28624
257 Ga0501034_0020100 3300049571 Bacteria 6818
258 Ga0501034_0156174 3300049571 Bacteria 2255
259 Ga0501036_0129601 3300049572 Bacteria 2130
260 Ga0501036_0223830 3300049572 Bacteria 1579
261 Ga0501036_0766957 3300049572 Bacteria 795
262 Ga0501037_0046988 3300049573 Bacteria 3164
263 Ga0501037_0225831 3300049573 Bacteria 1316
264 Ga0501038_0003820 3300049574 Bacteria 14007
265 Ga0501039_0001985 3300049575 Bacteria 15168
266 Ga0501039_0259172 3300049575 Bacteria 1367
267 Ga0501039_0336886 3300049575 Bacteria 1185
268 Ga0501040_0037515 3300049576 Bacteria 3293
269 Ga0501040_0194607 3300049576 Bacteria 1439
270 Ga0501040_0226621 3300049576 Bacteria 1330
271 Ga0501042_0339806 3300049578 Bacteria 1085
272 Ga0501043_0020651 3300049579 Bacteria 5167
273 Ga0501046_0000427 3300049580 Bacteria 42168
274 Ga0501046_0411434 3300049580 Bacteria 976
275 Ga0501047_0288427 3300049581 Bacteria 1485
276 Ga0501067_0000793 3300049583 Bacteria 17033
277 Ga0501067_0011424 3300049583 Bacteria 4917
278 Ga0501067_0017907 3300049583 Bacteria 3922
279 Ga0501068_0039745 3300049584 Bacteria 2821
280 Ga0501069_0029715 3300049585 Bacteria 3000
281 Ga0501069_0038282 3300049585 Bacteria 2647
282 Ga0501069_0052543 3300049585 Bacteria 2269
283 Ga0501070_0001376 3300049586 Bacteria 21740
284 Ga0501070_0003504 3300049586 Bacteria 13581
285 Ga0501070_0030047 3300049586 Bacteria 4553
286 Ga0501070_0157842 3300049586 Bacteria 1871
287 Ga0501070_0375472 3300049586 Bacteria 1152
288 Ga0501071_0000817 3300049587 Bacteria 16590
289 Ga0501072_0022361 3300049588 Bacteria 4905
290 Ga0501072_0121002 3300049588 Bacteria 2085
291 Ga0501073_0004710 3300049589 Bacteria 10246
292 Ga0501073_0021891 3300049589 Bacteria 4605
293 Ga0501073_0024044 3300049589 Bacteria 4375
294 Ga0501074_0003077 3300049590 Bacteria 11771
295 Ga0501074_0003084 3300049590 Bacteria 11749
296 Ga0501074_0011904 3300049590 Bacteria 6326
297 Ga0501074_0132829 3300049590 Bacteria 1780
298 Ga0501074_0300080 3300049590 Bacteria 1141
299 Ga0501077_0015310 3300049593 Bacteria 4828
300 Ga0501079_0006289 3300049741 Bacteria 8906
301 Ga0501080_0001323 3300049742 Bacteria 20645
302 Ga0501080_0001657 3300049742 Bacteria 18949
303 Ga0501080_0033921 3300049742 Bacteria 4765
304 Ga0501083_0006809 3300049744 Bacteria 8112
305 Ga0501083_0010806 3300049744 Bacteria 6420
306 Ga0501083_0068716 3300049744 Bacteria 2357
307 Ga0501035_0232814 3300049822 Bacteria 1569
308 Ga0501044_0085071 3300049823 Bacteria 3196
309 Ga0501045_0034182 3300049824 Bacteria 3689
310 Ga0501045_0432277 3300049824 Bacteria 979
311 nmdc:mga00v17_125482_c1 3300050491 Bacteria 1637
312 nmdc:mga00v17_137928_c1 3300050491 Bacteria 1562
313 nmdc:mga0yw44_660020_c1 3300050492 Bacteria 711
314 nmdc:mga06z11_54848_c1 3300050494 Bacteria 2056
315 nmdc:mga04h51_28920_c1 3300050495 Bacteria 1732
316 nmdc:mga05p37_40368_c1 3300050507 Bacteria 5731
317 nmdc:mga09592_14293_c1 3300050508 Bacteria 6480
318 nmdc:mga06r32_105714_c1 3300050510 Bacteria 2766
319 nmdc:mga0sz30_167359_c1 3300050516 Bacteria 974
320 Ga0495619_0049886 3300053085 Bacteria 2761
321 Ga0500568_0000285 3300053139 Bacteria 41989
322 Ga0501084_0000239 3300054114 Bacteria 41470
323 Ga0501084_0025021 3300054114 Bacteria 4982
324 Ga0501084_0701512 3300054114 Bacteria 853
325 Ga0501082_0006663 3300060353 Bacteria 9993
326 Ga0501082_0054199 3300060353 Bacteria 3457
327 Ga0466962_0066892 3300061719 Bacteria 1715
328 2644232008 2643221641 Bacteria 4490190
329 2740168612 2739367898 Bacteria 4367674
330 2883826525 2883821847 Bacteria 5121194
331 8054610175 8054609563 Bacteria 5170090
332 Ga0307416_100516722
333 JGI24737J22298_10041324
334 JGI25154J39366_1001427
335 Ga0070658_10071535
336 Ga0070683_100010145
337 Ga0070683_100010340
338 Ga0070683_100283258
339 Ga0070683_100906016
340 Ga0070680_100167330
341 Ga0070682_100037415
342 Ga0070682_100415770
343 Ga0070668_100131833
344 Ga0070714_100497352
345 Ga0070678_100101165
346 Ga0070662_100528806
347 Ga0070679_100207031
348 Ga0070684_100081338
349 Ga0070684_100244679
350 Ga0070686_100430496
351 Ga0070693_100019231
352 Ga0070665_100002422
353 Ga0070665_100113071
354 Ga0070664_100442018
355 Ga0068857_100022508
356 Ga0068856_100030785
357 Ga0068852_100268677
358 Ga0068861_100397455
359 Ga0068863_100235973
360 Ga0068860_100029471
361 Ga0081455_10016697
362 Ga0075364_10000664
363 Ga0075364_10225654
364 Ga0075367_10055835
365 Ga0075367_10134111
366 Ga0075430_100003669
367 Ga0075431_100276012
368 Ga0075429_100070469
369 Ga0068865_100123106
370 Ga0068865_100280177
371 Ga0105245_10005997
372 Ga0114129_10212013
373 Ga0105243_10459902
374 Ga0105242_10238500
375 Ga0105248_10785161
376 Ga0105237_10125499
377 Ga0105237_10134691
378 Ga0105249_10417033
379 Ga0105239_10001986
380 Ga0105246_10054758
381 Ga0105246_10822924
382 Ga0157369_10014355
383 Ga0157369_10390307
384 Ga0163162_10077021
385 Ga0163162_10096213
386 Ga0157372_10011980
387 Ga0157372_10045549
388 Ga0157375_10110976
389 Ga0157375_10228347
390 Ga0157375_10568607
391 Ga0157375_10644251
392 Ga0163163_10241567
393 Ga0157380_10002039
394 Ga0157380_10638382
395 Ga0182006_1133551
396 Ga0163161_10336078
397 Ga0206353_10576656
398 Ga0213876_10143668
399 Ga0209646_1000030
400 Ga0207671_10128793
401 Ga0207657_10385166
402 Ga0207690_10301206
403 Ga0207706_10379106
404 Ga0207709_10026043
405 Ga0207704_10100433
406 Ga0207704_10182823
407 Ga0207661_10313268
408 Ga0207679_10036172
409 Ga0207668_10238022
410 Ga0207658_10168413
411 Ga0207702_10287648
412 Ga0207676_10131127
413 Ga0207674_10010116
414 Ga0207683_10127363
415 Ga0207698_11014084
416 Ga0209813_10048560
417 Ga0268266_10002026
418 Ga0268264_10020318
419 Ga0316183_1199241
420 Ga0316181_1172080
421 Ga0316182_1431578
422 Ga0307408_100675685
423 Ga0307405_10732517
424 Ga0307406_10227423
425 Ga0307406_10251737
426 Ga0307407_10597009
427 Ga0307412_10190587
428 Ga0307412_10247620
429 Ga0307409_100053231
430 Ga0307409_100340350
431 Ga0307409_100778186
432 Ga0307414_10331579
433 Ga0307411_10163965
434 Ga0373944_0169051
435 Ga0395898_0044143
436 Ga0436365_0806228
437 Ga0439465_0028732
438 Ga0451789_0535389
439 Ga0451791_0742786
440 Ga0451791_1070418
441 Ga0451793_0539376
442 Ga0451793_1398327
443 Ga0451797_0214625
444 Ga0451797_0811827
445 Ga0451833_1233965
446 Ga0451837_0544041
447 Ga0451839_1424361
448 Ga0451841_0379531
449 Ga0451843_0672359
450 Ga0451853_1590311
451 Ga0451853_2059396
452 Ga0439454_035584
453 Ga0466972_0032066
454 Ga0466972_0046449
455 Ga0466972_0065079
456 Ga0466965_0017239
457 Ga0466965_0023810
458 Ga0466961_0030608
459 Ga0466963_0016610
460 Ga0466963_0208892
461 Ga0466963_0407726
462 Ga0466964_0023554
463 Ga0466964_0036259
464 Ga0466971_0092119
465 Ga0466971_0170592
466 Ga0466968_0127770
467 Ga0466970_0002194
468 Ga0466970_0031194
469 Ga0466970_0056322
470 Ga0466970_0119689
471 Ga0466957_0108438
472 Ga0466957_0143092
473 Ga0466960_0019505
474 Ga0451576_0077062
475 Ga0466958_0103401
476 Ga0466967_0060402
477 Ga0466967_0063106
478 Ga0466967_0109181
479 Ga0466967_0314368
480 Ga0466967_0380650
481 Ga0466967_0538912
482 Ga0466967_0710762
483 Ga0495627_000842
484 Ga0495629_0211529
485 Ga0495638_0045786
486 Ga0495639_0106551
487 Ga0495608_0072320
488 Ga0495608_0129994
489 Ga0495645_0066754
490 Ga0495667_0146106
491 Ga0495676_0408995
492 Ga0496100_0066320
493 Ga0496100_0074347
494 Ga0496100_0429858
495 Ga0496101_0019983
496 Ga0496101_0270299
497 Ga0496101_0348023
498 Ga0496102_0006495
499 Ga0496102_0008218
500 Ga0496102_0069334
501 Ga0496102_0224981
502 Ga0496102_0355276
503 Ga0496102_0486487
504 Ga0496102_0881740
505 Ga0496102_1039545
506 Ga0496103_0042362
507 Ga0496103_0049663
508 Ga0496103_0117500
509 Ga0496103_0273549
510 Ga0496104_0034443
511 Ga0496104_0265641
512 Ga0496104_0389514
513 Ga0496104_0733754
514 Ga0496105_0031307
515 Ga0496105_0031610
516 Ga0496105_0070497
517 Ga0496105_0128410
518 Ga0496105_0153603
519 Ga0496105_0420329
520 Ga0496106_0178651
521 Ga0496106_0250754
522 Ga0496106_0671538
523 Ga0496107_0127754
524 Ga0496107_0169504
525 Ga0496107_0182887
526 Ga0496107_0327771
527 Ga0496108_0100234
528 Ga0496108_0285651
529 Ga0496108_0636195
530 Ga0496108_0680080
531 Ga0496109_0009202
532 Ga0496109_0068367
533 Ga0496109_0106203
534 Ga0496109_0189707
535 Ga0496109_0454245
536 Ga0496110_0196666
537 Ga0496110_0230330
538 Ga0496110_0259721
539 Ga0496110_0408929
540 Ga0496111_0025695
541 Ga0496111_0069121
542 Ga0496111_0080219
543 Ga0496111_0258615
544 Ga0496112_0173630
545 Ga0496112_0178020
546 Ga0496112_0445291
547 Ga0496112_0465773
548 Ga0496112_0908618
549 Ga0496113_0037270
550 Ga0496113_0125636
551 Ga0496113_0192889
552 Ga0496113_0777780
553 Ga0496114_0004467
554 Ga0496114_0014263
555 Ga0496114_0020651
556 Ga0496114_0038805
557 Ga0496114_0051791
558 Ga0496114_0078599
559 Ga0496114_0092838
560 Ga0496114_0244787
561 Ga0496115_0018894
562 Ga0496115_0037151
563 Ga0496115_0135636
564 Ga0496115_0160871
565 Ga0496115_0209403
566 Ga0496117_0009170
567 Ga0496118_0080875
568 Ga0496119_0002632
569 Ga0496119_0042518
570 Ga0496119_0156727
571 Ga0496119_0205610
572 Ga0496121_0432040
573 Ga0496122_0011210
574 Ga0496122_0088725
575 Ga0496122_0089404
576 Ga0496124_0012713
577 Ga0496125_0000316
578 Ga0496126_0001804
579 Ga0496126_0045752
580 Ga0496126_0098143
581 Ga0496126_0303157
582 Ga0501031_0079706
583 Ga0501031_0151602
584 Ga0501032_0002082
585 Ga0501032_0513657
586 Ga0501033_0002503
587 Ga0501034_0001664
588 Ga0501034_0020100
589 Ga0501034_0156174
590 Ga0501036_0129601
591 Ga0501036_0223830
592 Ga0501036_0766957
593 Ga0501037_0046988
594 Ga0501037_0225831
595 Ga0501038_0003820
596 Ga0501039_0001985
597 Ga0501039_0259172
598 Ga0501039_0336886
599 Ga0501040_0037515
600 Ga0501040_0194607
601 Ga0501040_0226621
602 Ga0501042_0339806
603 Ga0501043_0020651
604 Ga0501046_0000427
605 Ga0501046_0411434
606 Ga0501047_0288427
607 Ga0501067_0000793
608 Ga0501067_0011424
609 Ga0501067_0017907
610 Ga0501068_0039745
611 Ga0501069_0029715
612 Ga0501069_0038282
613 Ga0501069_0052543
614 Ga0501070_0001376
615 Ga0501070_0003504
616 Ga0501070_0030047
617 Ga0501070_0157842
618 Ga0501070_0375472
619 Ga0501071_0000817
620 Ga0501072_0022361
621 Ga0501072_0121002
622 Ga0501073_0004710
623 Ga0501073_0021891
624 Ga0501073_0024044
625 Ga0501074_0003077
626 Ga0501074_0003084
627 Ga0501074_0011904
628 Ga0501074_0132829
629 Ga0501074_0300080
630 Ga0501077_0015310
631 Ga0501079_0006289
632 Ga0501080_0001323
633 Ga0501080_0001657
634 Ga0501080_0033921
635 Ga0501083_0006809
636 Ga0501083_0010806
637 Ga0501083_0068716
638 Ga0501035_0232814
639 Ga0501044_0085071
640 Ga0501045_0034182
641 Ga0501045_0432277
642 nmdc:mga00v17_125482_c1
643 nmdc:mga00v17_137928_c1
644 nmdc:mga0yw44_660020_c1
645 nmdc:mga06z11_54848_c1
646 nmdc:mga04h51_28920_c1
647 nmdc:mga05p37_40368_c1
648 nmdc:mga09592_14293_c1
649 nmdc:mga06r32_105714_c1
650 nmdc:mga0sz30_167359_c1
651 Ga0495619_0049886
652 Ga0500568_0000285
653 Ga0501084_0000239
654 Ga0501084_0025021
655 Ga0501084_0701512
656 Ga0501082_0006663
657 Ga0501082_0054199
658 Ga0466962_0066892
659 2644232008
660 2740168612
661 2883826525
662 8054610175

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00574

CLP_protease

Clp protease

37

201

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
8e7p-assembly1.cif.gz_M staphylococcus aureus clpp in complex with compound 3421 0.988 15 183
5c90-assembly1.cif.gz_J staphylococcus aureus clpp mutant - y63a 0.9875 14 183
5c90-assembly1.cif.gz_G staphylococcus aureus clpp mutant - y63a 0.9874 15 183
8ef8-assembly1.cif.gz_N staphylococcus aureus clpp y63w in complex with compound 3471 0.9874 15 183
5c90-assembly1.cif.gz_K staphylococcus aureus clpp mutant - y63a 0.9873 14 183
ID Description Score Start End Superfamily
af_Q9SAA2_76_271_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9819 14 185 3.90.226.10
af_P9WPC3_1_214_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9757 16 186 3.90.226.10
af_A0A0R0FC89_136_330_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9751 15 185 3.90.226.10
1yg8S00 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9745 11 185 3.90.226.10
af_Q2PMR0_6_196_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9716 16 185 3.90.226.10
ID Description Score Start End GO Terms
AF-A0A357NEU3-F1-model_v4 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) 0.993 15 118 GO:0004176
GO:0004252
GO:0006515
GO:0009368
GO:0051117
AF-A0A2W4J8K3-F1-model_v4 ATP-dependent Clp protease proteolytic subunit 0.9929 11 113 GO:0004176
GO:0004252
GO:0006515
GO:0009368
GO:0051117
AF-A0A2U1EYF6-F1-model_v4 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) 0.99 11 187 GO:0004176
GO:0004252
GO:0005737
GO:0006515
GO:0009368
GO:0051117
AF-A0A0N0AVA9-F1-model_v4 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) 0.9896 14 186 GO:0004176
GO:0004252
GO:0005737
GO:0006515
GO:0009368
GO:0051117
AF-A0A3D0NQ77-F1-model_v4 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp) 0.989 11 186 GO:0004176
GO:0004252
GO:0005737
GO:0006515
GO:0009368
GO:0051117

Map