F410155

General Info

Members Datasets Scaffolds Average Seq Length
330 207 660 437

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10028977|Ga0307509_100289774
Length 479
Sequence MRATVAGASLPPARRGSGGPAHAREGKTSCASRRGVEIVGPSMKIAVIGSGYVGLVAAAGFSDFGNHVSCVDIDEARIERLRRGEIPFHEPGLADLVQRNARQGRLSFTTDTTEAVRDTEVVFLAVGTPSQADGSADLRYVLEAARQVGRALTGFAVVVNKSTVPVGTGDLVRRTIAEVTSQPFTVASNPEFLKEGDAINDFLKPARVILGADDPHAIDVLRRLYDGFLRTSDRIQVMDLRSAELTKYAANAMLATRISFMNELAALADKLGADIEKVRKGMGSDPRIGGKFLFPGVGFGGSCFPKDLRALRDMGRANGVQLGIIESTVDANDRSKRAFGTRVIERLGSALGDKRVAVWGLAFKPETDDIREAPALDIIAQLREAGVSVVGYDPIAADNVRAVLGEGIALVDDPYLAAEGADAILLITEWHQLRQPDFVRLRKLVRTPVLFDGRNVWDPVAAQRAGFEYHAIGRPRGRD

Samples

Sample ID Description Type Environment
1 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
107 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
112 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
113 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
114 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
115 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
116 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
117 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
118 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
119 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
120 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
121 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
122 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
123 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
124 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
125 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
126 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
127 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
128 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
129 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
130 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
131 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
132 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
133 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
134 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
135 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
136 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
137 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
138 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
139 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
140 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
141 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
142 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
143 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
144 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
145 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
146 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
147 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
148 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
149 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
150 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
151 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
152 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
153 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
154 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
155 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
156 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
157 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
158 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
159 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
160 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
161 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
162 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
163 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
164 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
165 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
166 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
167 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
168 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
169 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
170 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
171 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
172 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
173 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
174 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
175 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
176 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
177 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
178 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
179 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
180 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
181 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
182 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
183 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
186 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
187 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
188 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
189 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
192 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
193 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
194 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
195 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
196 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
197 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
198 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
199 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
200 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
201 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
202 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
203 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
204 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
205 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
206 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
207 8057160832 Larsenimonas rhizosphaerae GH2-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.39
Metatranscriptomes 0
Isolates 0.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.64
Nodule 0.61
Rhizoplane 2.12
Rhizosphere 86.36
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307509_10028977 3300031507 Bacteria 6149
2 SwRhRL2b_contig_1693732 2162886007 Bacteria 279526
3 rootH1_10008632 3300003323 Bacteria 7576
4 Ga0065704_10070142 3300005289 Bacteria 354388
5 Ga0070676_10004662 3300005328 Bacteria 7243
6 Ga0070676_10005082 3300005328 Bacteria 6977
7 Ga0070683_100001586 3300005329 Bacteria 17595
8 Ga0070683_100063482 3300005329 Bacteria 3435
9 Ga0070690_100035024 3300005330 Bacteria 3148
10 Ga0070677_10041135 3300005333 Bacteria 1823
11 Ga0068869_100061911 3300005334 Bacteria 2746
12 Ga0070666_10069081 3300005335 Bacteria 2402
13 Ga0070680_100011233 3300005336 Bacteria 6927
14 Ga0070680_100023013 3300005336 Bacteria 4965
15 Ga0070682_100002750 3300005337 Bacteria 9738
16 Ga0070682_100010181 3300005337 Bacteria 5331
17 Ga0070682_100062384 3300005337 Bacteria 2361
18 Ga0068868_100002645 3300005338 Bacteria 12434
19 Ga0070689_100072942 3300005340 Bacteria 2683
20 Ga0070689_100154421 3300005340 Bacteria 1853
21 Ga0070691_10022031 3300005341 Bacteria 2953
22 Ga0070687_100019159 3300005343 Bacteria 3180
23 Ga0070661_100001425 3300005344 Bacteria 16625
24 Ga0070692_10003889 3300005345 Bacteria 6154
25 Ga0070668_100014460 3300005347 Bacteria 5899
26 Ga0070674_100008579 3300005356 Bacteria 6094
27 Ga0070673_100004643 3300005364 Bacteria 8714
28 Ga0070688_100007636 3300005365 Bacteria 5840
29 Ga0070688_100066442 3300005365 Bacteria 2295
30 Ga0070659_100080054 3300005366 Bacteria 2608
31 Ga0070700_100008579 3300005441 Bacteria 5568
32 Ga0070700_100144144 3300005441 Bacteria 1622
33 Ga0070694_100020963 3300005444 Bacteria 4172
34 Ga0070708_100200097 3300005445 Bacteria 1870
35 Ga0070678_100004245 3300005456 Bacteria 8098
36 Ga0070662_100001059 3300005457 Bacteria 16795
37 Ga0070681_10003971 3300005458 Bacteria 13950
38 Ga0070681_10036048 3300005458 Bacteria 4969
39 Ga0068867_100019526 3300005459 Bacteria 4830
40 Ga0068867_100023228 3300005459 Bacteria 4439
41 Ga0070685_10135191 3300005466 Bacteria 1546
42 Ga0070706_100212162 3300005467 Bacteria 1808
43 Ga0070706_100317879 3300005467 Bacteria 1452
44 Ga0070698_100009253 3300005471 Bacteria 10569
45 Ga0070698_100084009 3300005471 Bacteria 3173
46 Ga0070699_100047528 3300005518 Bacteria 3713
47 Ga0070679_100006650 3300005530 Bacteria 10779
48 Ga0070679_100009110 3300005530 Bacteria 9366
49 Ga0070679_100222951 3300005530 Bacteria 1846
50 Ga0070684_100006988 3300005535 Bacteria 8767
51 Ga0070684_100012037 3300005535 Bacteria 6916
52 Ga0070684_100034109 3300005535 Bacteria 4349
53 Ga0070684_100184815 3300005535 Bacteria 1895
54 Ga0070686_100017591 3300005544 Bacteria 4180
55 Ga0070686_100077200 3300005544 Bacteria 2195
56 Ga0070696_100014899 3300005546 Bacteria 5220
57 Ga0070696_100065048 3300005546 Bacteria 2556
58 Ga0070704_100023413 3300005549 Bacteria 4034
59 Ga0070704_100175441 3300005549 Bacteria 1709
60 Ga0068855_100016019 3300005563 Bacteria 9018
61 Ga0068855_100379432 3300005563 Bacteria 1552
62 Ga0068854_100047879 3300005578 Bacteria 3048
63 Ga0068852_100213217 3300005616 Bacteria 1833
64 Ga0068859_100007851 3300005617 Bacteria 10832
65 Ga0068859_100100359 3300005617 Bacteria 2950
66 Ga0068859_100172278 3300005617 Bacteria 2246
67 Ga0068859_100207156 3300005617 Bacteria 2047
68 Ga0068859_100305000 3300005617 Bacteria 1686
69 Ga0068866_10057871 3300005718 Bacteria 1999
70 Ga0068866_10108679 3300005718 Bacteria 1543
71 Ga0068861_100009656 3300005719 Bacteria 6665
72 Ga0068861_100069805 3300005719 Bacteria 2719
73 Ga0068861_100182316 3300005719 Bacteria 1749
74 Ga0068858_100032246 3300005842 Bacteria 4866
75 Ga0068860_100037962 3300005843 Bacteria 4609
76 Ga0068860_100129265 3300005843 Bacteria 2423
77 Ga0070717_10109359 3300006028 Bacteria 2356
78 Ga0097621_100129079 3300006237 Bacteria 2150
79 Ga0075431_100073310 3300006847 Bacteria 3532
80 Ga0075429_100034567 3300006880 Bacteria 4393
81 Ga0068865_100001139 3300006881 Bacteria 15407
82 Ga0068865_100054337 3300006881 Bacteria 2782
83 Ga0097620_100007851 3300006931 Bacteria 10832
84 Ga0097620_100100359 3300006931 Bacteria 2950
85 Ga0097620_100172282 3300006931 Bacteria 2246
86 Ga0097620_100207165 3300006931 Bacteria 2047
87 Ga0097620_100304979 3300006931 Bacteria 1686
88 Ga0079104_1001612 3300006946 Bacteria 14701
89 Ga0075435_100070594 3300007076 Bacteria 2851
90 Ga0075435_100142398 3300007076 Bacteria 2012
91 Ga0105240_10006496 3300009093 Bacteria 17175
92 Ga0105240_10007843 3300009093 Bacteria 15409
93 Ga0105240_10290433 3300009093 Bacteria 1875
94 Ga0111539_10012618 3300009094 Bacteria 10586
95 Ga0111539_10030356 3300009094 Bacteria 6571
96 Ga0111539_10081825 3300009094 Bacteria 3798
97 Ga0105245_10000019 3300009098 Bacteria 182590
98 Ga0105245_10022040 3300009098 Bacteria 5591
99 Ga0105245_10344244 3300009098 Bacteria 1475
100 Ga0105243_10030013 3300009148 Bacteria 4184
101 Ga0105237_10000139 3300009545 Bacteria 102251
102 Ga0105249_10092588 3300009553 Bacteria 2830
103 Ga0105249_10142941 3300009553 Bacteria 2296
104 Ga0157373_10016457 3300013100 Bacteria 5393
105 Ga0157370_10106132 3300013104 Bacteria 2629
106 Ga0157374_10006841 3300013296 Bacteria 9701
107 Ga0157378_10026360 3300013297 Bacteria 5124
108 Ga0157378_10080414 3300013297 Bacteria 2944
109 Ga0157372_10011054 3300013307 Bacteria 9605
110 Ga0157372_10021691 3300013307 Bacteria 6942
111 Ga0163161_10003388 3300017792 Bacteria 11186
112 Ga0207697_10014931 3300025315 Bacteria 3215
113 Ga0207682_10042648 3300025893 Bacteria 1854
114 Ga0207645_10003530 3300025907 Bacteria 11829
115 Ga0207684_10105377 3300025910 Bacteria 2412
116 Ga0207654_10036211 3300025911 Bacteria 2755
117 Ga0207707_10000519 3300025912 Bacteria 39417
118 Ga0207707_10090976 3300025912 Bacteria 2667
119 Ga0207707_10094275 3300025912 Bacteria 2615
120 Ga0207695_10001473 3300025913 Bacteria 39382
121 Ga0207695_10001538 3300025913 Bacteria 38080
122 Ga0207695_10073138 3300025913 Bacteria 3494
123 Ga0207671_10000120 3300025914 Bacteria 120786
124 Ga0207660_10000107 3300025917 Bacteria 46998
125 Ga0207660_10019219 3300025917 Bacteria 4563
126 Ga0207662_10002603 3300025918 Bacteria 9098
127 Ga0207662_10005263 3300025918 Bacteria 6873
128 Ga0207649_10015321 3300025920 Bacteria 4309
129 Ga0207652_10000440 3300025921 Bacteria 43016
130 Ga0207652_10003664 3300025921 Bacteria 12644
131 Ga0207652_10045316 3300025921 Bacteria 3749
132 Ga0207681_10039572 3300025923 Bacteria 3131
133 Ga0207681_10081714 3300025923 Bacteria 2282
134 Ga0207694_10005720 3300025924 Bacteria 9528
135 Ga0207650_10047223 3300025925 Bacteria 3173
136 Ga0207659_10176181 3300025926 Bacteria 1690
137 Ga0207687_10000263 3300025927 Bacteria 35777
138 Ga0207706_10001501 3300025933 Bacteria 23152
139 Ga0207706_10016415 3300025933 Bacteria 6685
140 Ga0207709_10076007 3300025935 Bacteria 2149
141 Ga0207670_10023132 3300025936 Bacteria 3863
142 Ga0207670_10030501 3300025936 Bacteria 3445
143 Ga0207670_10039502 3300025936 Bacteria 3091
144 Ga0207670_10055613 3300025936 Bacteria 2675
145 Ga0207669_10002097 3300025937 Bacteria 8456
146 Ga0207704_10001423 3300025938 Bacteria 10698
147 Ga0207691_10039456 3300025940 Bacteria 4369
148 Ga0207689_10026244 3300025942 Bacteria 4878
149 Ga0207661_10005030 3300025944 Bacteria 9271
150 Ga0207661_10019331 3300025944 Bacteria 5076
151 Ga0207667_10045992 3300025949 Bacteria 4621
152 Ga0207651_10000665 3300025960 Bacteria 14669
153 Ga0207712_10087319 3300025961 Bacteria 2287
154 Ga0207668_10005569 3300025972 Bacteria 7425
155 Ga0207640_10013361 3300025981 Bacteria 4702
156 Ga0207677_10005420 3300026023 Bacteria 6926
157 Ga0207708_10001573 3300026075 Bacteria 17053
158 Ga0207708_10066571 3300026075 Bacteria 2754
159 Ga0207641_10033968 3300026088 Bacteria 4240
160 Ga0207641_10159211 3300026088 Bacteria 2051
161 Ga0207648_10010008 3300026089 Bacteria 9021
162 Ga0207648_10019988 3300026089 Bacteria 6042
163 Ga0207674_10062053 3300026116 Bacteria 3776
164 Ga0207674_10102723 3300026116 Bacteria 2838
165 Ga0207674_10127210 3300026116 Bacteria 2513
166 Ga0207675_100003079 3300026118 Bacteria 16347
167 Ga0207675_100073161 3300026118 Bacteria 3207
168 Ga0207675_100203340 3300026118 Bacteria 1903
169 Ga0207683_10005192 3300026121 Bacteria 11184
170 Ga0207683_10068939 3300026121 Bacteria 3123
171 Ga0207698_10075599 3300026142 Bacteria 2693
172 Ga0209281_1005825 3300027111 Bacteria 3320
173 Ga0209971_1007711 3300027682 Bacteria 2555
174 Ga0207428_10001889 3300027907 Bacteria 21308
175 Ga0268266_10074261 3300028379 Bacteria 2952
176 Ga0268264_10059870 3300028381 Bacteria 3192
177 Ga0265318_10000020 3300028577 Bacteria 166887
178 Ga0265336_10013051 3300028666 Bacteria 2779
179 Ga0307517_10037419 3300028786 Bacteria 5419
180 Ga0307515_10007891 3300028794 Bacteria 20911
181 Ga0265338_10011245 3300028800 Bacteria 10366
182 Ga0265338_10039135 3300028800 Bacteria 4480
183 Ga0265330_10000011 3300031235 Bacteria 183176
184 Ga0265330_10003352 3300031235 Bacteria 8396
185 Ga0265332_10000079 3300031238 Bacteria 83722
186 Ga0265328_10002828 3300031239 Bacteria 7759
187 Ga0265320_10000043 3300031240 Bacteria 124028
188 Ga0265320_10034946 3300031240 Bacteria 2551
189 Ga0265329_10001398 3300031242 Bacteria 11693
190 Ga0265329_10001885 3300031242 Bacteria 9894
191 Ga0265340_10009890 3300031247 Bacteria 5112
192 Ga0265331_10000035 3300031250 Bacteria 199191
193 Ga0265316_10000596 3300031344 Bacteria 40348
194 Ga0265316_10001283 3300031344 Bacteria 27008
195 Ga0265316_10001411 3300031344 Bacteria 25843
196 Ga0265316_10010169 3300031344 Bacteria 8594
197 Ga0265316_10013402 3300031344 Bacteria 7287
198 Ga0265316_10096301 3300031344 Bacteria 2253
199 Ga0307513_10005491 3300031456 Bacteria 16738
200 Ga0307509_10000429 3300031507 Bacteria 70665
201 Ga0307509_10070033 3300031507 Bacteria 3664
202 Ga0265313_10000010 3300031595 Bacteria 166869
203 Ga0265313_10014828 3300031595 Bacteria 4580
204 Ga0307508_10048402 3300031616 Bacteria 3787
205 Ga0316575_10005081 3300031665 Bacteria 4666
206 Ga0265314_10000094 3300031711 Bacteria 134574
207 Ga0265314_10059805 3300031711 Bacteria 2604
208 Ga0265342_10001320 3300031712 Bacteria 23253
209 Ga0265342_10003759 3300031712 Bacteria 12248
210 Ga0265342_10011919 3300031712 Bacteria 5915
211 Ga0265342_10019127 3300031712 Bacteria 4418
212 Ga0265342_10031901 3300031712 Bacteria 3253
213 Ga0265342_10056041 3300031712 Bacteria 2337
214 Ga0316576_10008397 3300031727 Bacteria 6582
215 Ga0316576_10017435 3300031727 Bacteria 4878
216 Ga0316576_10190502 3300031727 Bacteria 1546
217 Ga0316578_10001179 3300031728 Bacteria 10332
218 Ga0316578_10002113 3300031728 Bacteria 8525
219 Ga0307516_10023189 3300031730 Bacteria 6366
220 Ga0307406_10028488 3300031901 Bacteria 3375
221 Ga0307415_100014498 3300032126 Bacteria 4637
222 Ga0316583_10019197 3300032133 Bacteria 2454
223 Ga0316585_10000768 3300032137 Bacteria 8094
224 Ga0373949_0000397 3300035090 Bacteria 15224
225 Ga0373923_0052682 3300035111 Bacteria 1710
226 Ga0373936_0000029 3300035113 Bacteria 116725
227 Ga0373941_0000903 3300035115 Bacteria 6112
228 Ga0373941_0018177 3300035115 Bacteria 1939
229 Ga0373955_0073335 3300035172 Bacteria 1919
230 Ga0373961_0000042 3300035241 Bacteria 75338
231 Ga0373935_0038903 3300035692 Bacteria 2980
232 Ga0373937_0183268 3300036401 Bacteria 1966
233 Ga0373925_0040793 3300037068 Bacteria 3438
234 Ga0395899_0022083 3300037312 Bacteria 4825
235 Ga0395900_0055198 3300037418 Bacteria 4090
236 Ga0395900_0241434 3300037418 Bacteria 1812
237 Ga0395898_0035873 3300037466 Bacteria 4928
238 Ga0395898_0084744 3300037466 Bacteria 3055
239 Ga0400484_04223 3300038725 Bacteria 1519
240 Ga0400484_32824 3300038725 Bacteria 2660
241 Ga0400490_27985 3300038726 Bacteria 24241
242 Ga0400490_50108 3300038726 Bacteria 5088
243 Ga0400490_56664 3300038726 Bacteria 3131
244 Ga0400490_58017 3300038726 Bacteria 3058
245 Ga0400486_32100 3300038742 Archaea 2605
246 Ga0400489_32887 3300039093 Bacteria 4070
247 Ga0400489_77396 3300039093 Bacteria 4980
248 Ga0400489_77599 3300039093 Bacteria 17205
249 Ga0436365_1828509 3300039437 Bacteria 4850
250 Ga0436361_0366502 3300039447 Bacteria 3025
251 Ga0436361_1147337 3300039447 Bacteria 1414
252 Ga0439465_0010627 3300041413 Bacteria 2889
253 Ga0451853_0471182 3300041512 Bacteria 1937
254 Ga0451577_0005532 3300042876 Bacteria 12881
255 Ga0451577_0071158 3300042876 Bacteria 3101
256 Ga0453683_0030115 3300044673 Bacteria 3432
257 Ga0453683_0037991 3300044673 Bacteria 3028
258 Ga0453684_0000141 3300044712 Bacteria 316572
259 Ga0453684_0000174 3300044712 Bacteria 284963
260 Ga0453684_0001670 3300044712 Bacteria 60115
261 Ga0453684_0016348 3300044712 Bacteria 11613
262 Ga0453684_0017271 3300044712 Bacteria 11192
263 Ga0453684_0025832 3300044712 Bacteria 8511
264 Ga0453684_0035803 3300044712 Bacteria 6853
265 Ga0453684_0036103 3300044712 Bacteria 6818
266 Ga0453684_0059752 3300044712 Bacteria 4911
267 Ga0451576_0004167 3300045051 Bacteria 19032
268 Ga0451576_0101496 3300045051 Bacteria 2992
269 Ga0451576_0265190 3300045051 Bacteria 1795
270 Ga0495638_0001627 3300046460 Bacteria 19997
271 Ga0495638_0003031 3300046460 Bacteria 13379
272 Ga0495638_0004775 3300046460 Bacteria 10221
273 Ga0495662_0001360 3300046476 Bacteria 12086
274 Ga0495607_0008118 3300046501 Bacteria 7207
275 Ga0495628_0272998 3300046516 Bacteria 1257
276 Ga0495630_0000029 3300046517 Bacteria 142941
277 Ga0495632_0014891 3300046519 Bacteria 4382
278 Ga0495632_0060924 3300046519 Bacteria 1832
279 Ga0495637_0003692 3300046520 Bacteria 8084
280 Ga0495634_0006328 3300046642 Bacteria 9010
281 Ga0495613_0091473 3300046689 Bacteria 2203
282 Ga0495589_0001567 3300046794 Bacteria 13148
283 Ga0495674_0004958 3300047319 Bacteria 12806
284 Ga0495683_0000355 3300047323 Bacteria 37793
285 Ga0495686_0004789 3300047472 Bacteria 10929
286 Ga0495602_0084036 3300048088 Bacteria 2664
287 Ga0495602_0099523 3300048088 Bacteria 2390
288 Ga0496100_0016937 3300048903 Bacteria 4290
289 Ga0496101_0064018 3300048904 Bacteria 2678
290 Ga0496108_0018155 3300048911 Bacteria 5757
291 Ga0496109_0036240 3300048912 Bacteria 4453
292 Ga0496112_0093790 3300048915 Bacteria 2972
293 Ga0496112_0265824 3300048915 Bacteria 1664
294 Ga0496115_0070519 3300048918 Bacteria 2833
295 Ga0496116_0004587 3300048919 Bacteria 13099
296 Ga0496126_0069441 3300048929 Bacteria 3143
297 Ga0501043_0198069 3300049579 Bacteria 1560
298 Ga0501047_0000396 3300049581 Bacteria 48912
299 Ga0501047_0007709 3300049581 Bacteria 10138
300 Ga0501047_0029863 3300049581 Bacteria 5254
301 Ga0501070_0007191 3300049586 Bacteria 9451
302 Ga0501070_0009928 3300049586 Bacteria 8048
303 Ga0501070_0054437 3300049586 Bacteria 3318
304 Ga0501070_0096749 3300049586 Bacteria 2442
305 Ga0501070_0131788 3300049586 Bacteria 2064
306 Ga0501073_0025421 3300049589 Bacteria 4247
307 Ga0501073_0070487 3300049589 Bacteria 2435
308 Ga0501076_0214921 3300049592 Bacteria 1572
309 Ga0501077_0075348 3300049593 Bacteria 2137
310 Ga0501080_0183737 3300049742 Bacteria 1923
311 Ga0501044_0263421 3300049823 Bacteria 1662
312 nmdc:mga09592_5312_c1 3300050508 Bacteria 10469
313 nmdc:mga09592_59757_c1 3300050508 Bacteria 3222
314 nmdc:mga0qj67_192706_c1 3300050509 Bacteria 1656
315 nmdc:mga08y16_7372_c1 3300050511 Bacteria 11531
316 nmdc:mga0rr50_70621_c1 3300050513 Bacteria 2661
317 Ga0500635_0003221 3300053080 Bacteria 4090
318 Ga0500566_0000504 3300053094 Bacteria 21787
319 Ga0500566_0002405 3300053094 Bacteria 11074
320 Ga0500654_072505 3300053099 Bacteria 1667
321 Ga0500554_000192 3300053102 Bacteria 12823
322 Ga0500572_003433 3300053111 Bacteria 3626
323 Ga0500595_000091 3300053119 Bacteria 62164
324 Ga0500642_0063440 3300053130 Bacteria 1665
325 Ga0500568_0035256 3300053139 Bacteria 2043
326 Ga0500600_0068830 3300053149 Bacteria 1947
327 Ga0500603_003108 3300053150 Bacteria 3579
328 Ga0500636_0000055 3300053177 Bacteria 54438
329 2857544089 2857542790 Bacteria 5326616
330 8057161636 8057160832 Bacteria 3268302
331 Ga0307509_10028977
332 SwRhRL2b_contig_1693732
333 rootH1_10008632
334 Ga0065704_10070142
335 Ga0070676_10004662
336 Ga0070676_10005082
337 Ga0070683_100001586
338 Ga0070683_100063482
339 Ga0070690_100035024
340 Ga0070677_10041135
341 Ga0068869_100061911
342 Ga0070666_10069081
343 Ga0070680_100011233
344 Ga0070680_100023013
345 Ga0070682_100002750
346 Ga0070682_100010181
347 Ga0070682_100062384
348 Ga0068868_100002645
349 Ga0070689_100072942
350 Ga0070689_100154421
351 Ga0070691_10022031
352 Ga0070687_100019159
353 Ga0070661_100001425
354 Ga0070692_10003889
355 Ga0070668_100014460
356 Ga0070674_100008579
357 Ga0070673_100004643
358 Ga0070688_100007636
359 Ga0070688_100066442
360 Ga0070659_100080054
361 Ga0070700_100008579
362 Ga0070700_100144144
363 Ga0070694_100020963
364 Ga0070708_100200097
365 Ga0070678_100004245
366 Ga0070662_100001059
367 Ga0070681_10003971
368 Ga0070681_10036048
369 Ga0068867_100019526
370 Ga0068867_100023228
371 Ga0070685_10135191
372 Ga0070706_100212162
373 Ga0070706_100317879
374 Ga0070698_100009253
375 Ga0070698_100084009
376 Ga0070699_100047528
377 Ga0070679_100006650
378 Ga0070679_100009110
379 Ga0070679_100222951
380 Ga0070684_100006988
381 Ga0070684_100012037
382 Ga0070684_100034109
383 Ga0070684_100184815
384 Ga0070686_100017591
385 Ga0070686_100077200
386 Ga0070696_100014899
387 Ga0070696_100065048
388 Ga0070704_100023413
389 Ga0070704_100175441
390 Ga0068855_100016019
391 Ga0068855_100379432
392 Ga0068854_100047879
393 Ga0068852_100213217
394 Ga0068859_100007851
395 Ga0068859_100100359
396 Ga0068859_100172278
397 Ga0068859_100207156
398 Ga0068859_100305000
399 Ga0068866_10057871
400 Ga0068866_10108679
401 Ga0068861_100009656
402 Ga0068861_100069805
403 Ga0068861_100182316
404 Ga0068858_100032246
405 Ga0068860_100037962
406 Ga0068860_100129265
407 Ga0070717_10109359
408 Ga0097621_100129079
409 Ga0075431_100073310
410 Ga0075429_100034567
411 Ga0068865_100001139
412 Ga0068865_100054337
413 Ga0097620_100007851
414 Ga0097620_100100359
415 Ga0097620_100172282
416 Ga0097620_100207165
417 Ga0097620_100304979
418 Ga0079104_1001612
419 Ga0075435_100070594
420 Ga0075435_100142398
421 Ga0105240_10006496
422 Ga0105240_10007843
423 Ga0105240_10290433
424 Ga0111539_10012618
425 Ga0111539_10030356
426 Ga0111539_10081825
427 Ga0105245_10000019
428 Ga0105245_10022040
429 Ga0105245_10344244
430 Ga0105243_10030013
431 Ga0105237_10000139
432 Ga0105249_10092588
433 Ga0105249_10142941
434 Ga0157373_10016457
435 Ga0157370_10106132
436 Ga0157374_10006841
437 Ga0157378_10026360
438 Ga0157378_10080414
439 Ga0157372_10011054
440 Ga0157372_10021691
441 Ga0163161_10003388
442 Ga0207697_10014931
443 Ga0207682_10042648
444 Ga0207645_10003530
445 Ga0207684_10105377
446 Ga0207654_10036211
447 Ga0207707_10000519
448 Ga0207707_10090976
449 Ga0207707_10094275
450 Ga0207695_10001473
451 Ga0207695_10001538
452 Ga0207695_10073138
453 Ga0207671_10000120
454 Ga0207660_10000107
455 Ga0207660_10019219
456 Ga0207662_10002603
457 Ga0207662_10005263
458 Ga0207649_10015321
459 Ga0207652_10000440
460 Ga0207652_10003664
461 Ga0207652_10045316
462 Ga0207681_10039572
463 Ga0207681_10081714
464 Ga0207694_10005720
465 Ga0207650_10047223
466 Ga0207659_10176181
467 Ga0207687_10000263
468 Ga0207706_10001501
469 Ga0207706_10016415
470 Ga0207709_10076007
471 Ga0207670_10023132
472 Ga0207670_10030501
473 Ga0207670_10039502
474 Ga0207670_10055613
475 Ga0207669_10002097
476 Ga0207704_10001423
477 Ga0207691_10039456
478 Ga0207689_10026244
479 Ga0207661_10005030
480 Ga0207661_10019331
481 Ga0207667_10045992
482 Ga0207651_10000665
483 Ga0207712_10087319
484 Ga0207668_10005569
485 Ga0207640_10013361
486 Ga0207677_10005420
487 Ga0207708_10001573
488 Ga0207708_10066571
489 Ga0207641_10033968
490 Ga0207641_10159211
491 Ga0207648_10010008
492 Ga0207648_10019988
493 Ga0207674_10062053
494 Ga0207674_10102723
495 Ga0207674_10127210
496 Ga0207675_100003079
497 Ga0207675_100073161
498 Ga0207675_100203340
499 Ga0207683_10005192
500 Ga0207683_10068939
501 Ga0207698_10075599
502 Ga0209281_1005825
503 Ga0209971_1007711
504 Ga0207428_10001889
505 Ga0268266_10074261
506 Ga0268264_10059870
507 Ga0265318_10000020
508 Ga0265336_10013051
509 Ga0307517_10037419
510 Ga0307515_10007891
511 Ga0265338_10011245
512 Ga0265338_10039135
513 Ga0265330_10000011
514 Ga0265330_10003352
515 Ga0265332_10000079
516 Ga0265328_10002828
517 Ga0265320_10000043
518 Ga0265320_10034946
519 Ga0265329_10001398
520 Ga0265329_10001885
521 Ga0265340_10009890
522 Ga0265331_10000035
523 Ga0265316_10000596
524 Ga0265316_10001283
525 Ga0265316_10001411
526 Ga0265316_10010169
527 Ga0265316_10013402
528 Ga0265316_10096301
529 Ga0307513_10005491
530 Ga0307509_10000429
531 Ga0307509_10070033
532 Ga0265313_10000010
533 Ga0265313_10014828
534 Ga0307508_10048402
535 Ga0316575_10005081
536 Ga0265314_10000094
537 Ga0265314_10059805
538 Ga0265342_10001320
539 Ga0265342_10003759
540 Ga0265342_10011919
541 Ga0265342_10019127
542 Ga0265342_10031901
543 Ga0265342_10056041
544 Ga0316576_10008397
545 Ga0316576_10017435
546 Ga0316576_10190502
547 Ga0316578_10001179
548 Ga0316578_10002113
549 Ga0307516_10023189
550 Ga0307406_10028488
551 Ga0307415_100014498
552 Ga0316583_10019197
553 Ga0316585_10000768
554 Ga0373949_0000397
555 Ga0373923_0052682
556 Ga0373936_0000029
557 Ga0373941_0000903
558 Ga0373941_0018177
559 Ga0373955_0073335
560 Ga0373961_0000042
561 Ga0373935_0038903
562 Ga0373937_0183268
563 Ga0373925_0040793
564 Ga0395899_0022083
565 Ga0395900_0055198
566 Ga0395900_0241434
567 Ga0395898_0035873
568 Ga0395898_0084744
569 Ga0400484_04223
570 Ga0400484_32824
571 Ga0400490_27985
572 Ga0400490_50108
573 Ga0400490_56664
574 Ga0400490_58017
575 Ga0400486_32100
576 Ga0400489_32887
577 Ga0400489_77396
578 Ga0400489_77599
579 Ga0436365_1828509
580 Ga0436361_0366502
581 Ga0436361_1147337
582 Ga0439465_0010627
583 Ga0451853_0471182
584 Ga0451577_0005532
585 Ga0451577_0071158
586 Ga0453683_0030115
587 Ga0453683_0037991
588 Ga0453684_0000141
589 Ga0453684_0000174
590 Ga0453684_0001670
591 Ga0453684_0016348
592 Ga0453684_0017271
593 Ga0453684_0025832
594 Ga0453684_0035803
595 Ga0453684_0036103
596 Ga0453684_0059752
597 Ga0451576_0004167
598 Ga0451576_0101496
599 Ga0451576_0265190
600 Ga0495638_0001627
601 Ga0495638_0003031
602 Ga0495638_0004775
603 Ga0495662_0001360
604 Ga0495607_0008118
605 Ga0495628_0272998
606 Ga0495630_0000029
607 Ga0495632_0014891
608 Ga0495632_0060924
609 Ga0495637_0003692
610 Ga0495634_0006328
611 Ga0495613_0091473
612 Ga0495589_0001567
613 Ga0495674_0004958
614 Ga0495683_0000355
615 Ga0495686_0004789
616 Ga0495602_0084036
617 Ga0495602_0099523
618 Ga0496100_0016937
619 Ga0496101_0064018
620 Ga0496108_0018155
621 Ga0496109_0036240
622 Ga0496112_0093790
623 Ga0496112_0265824
624 Ga0496115_0070519
625 Ga0496116_0004587
626 Ga0496126_0069441
627 Ga0501043_0198069
628 Ga0501047_0000396
629 Ga0501047_0007709
630 Ga0501047_0029863
631 Ga0501070_0007191
632 Ga0501070_0009928
633 Ga0501070_0054437
634 Ga0501070_0096749
635 Ga0501070_0131788
636 Ga0501073_0025421
637 Ga0501073_0070487
638 Ga0501076_0214921
639 Ga0501077_0075348
640 Ga0501080_0183737
641 Ga0501044_0263421
642 nmdc:mga09592_5312_c1
643 nmdc:mga09592_59757_c1
644 nmdc:mga0qj67_192706_c1
645 nmdc:mga08y16_7372_c1
646 nmdc:mga0rr50_70621_c1
647 Ga0500635_0003221
648 Ga0500566_0000504
649 Ga0500566_0002405
650 Ga0500654_072505
651 Ga0500554_000192
652 Ga0500572_003433
653 Ga0500595_000091
654 Ga0500642_0063440
655 Ga0500568_0035256
656 Ga0500600_0068830
657 Ga0500603_003108
658 Ga0500636_0000055
659 2857544089
660 8057161636

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00984

UDPG_MGDP_dh

UDP-glucose/GDP-mannose dehydrogenase family, central domain

241

334

0.99

PF03720

UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

357

459

0.99

PF03721

UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

43

224

0.96

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

44

128

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qcu-assembly1.cif.gz_A crystal structure of glycerol-3-phosphate dehydrogenase from escherichia coli 0.9902 2 32
8gs8-assembly1.cif.gz_A cryo-em structure of the human respiratory complex ii 0.9789 2 31
7exs-assembly1.cif.gz_A thermomicrobium roseum sarcosine oxidase mutant - s320r 0.9756 1 31
3gg2-assembly1.cif.gz_B crystal structure of udp-glucose 6-dehydrogenase from porphyromonas gingivalis bound to product udp-glucuronate 0.9732 1 423
3gg2-assembly1.cif.gz_D crystal structure of udp-glucose 6-dehydrogenase from porphyromonas gingivalis bound to product udp-glucuronate 0.971 1 437
ID Description Score Start End Superfamily
3gg2D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9734 1 202 3.40.50.720
2e57B01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9717 2 32 3.50.50.60
af_P37906_24_389_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9704 2 32 3.50.50.60
3gg2D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9686 1 202 3.40.50.720
4j36B00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9683 2 33 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A838WV55-F1-model_v4 UDP-glucose 6-dehydrogenase 0.997 1 69 GO:0016616
GO:0051287
AF-A0A522LC47-F1-model_v4 UDP-glucose 6-dehydrogenase 0.9965 1 67 GO:0016616
GO:0051287
AF-A0A1Y4HZU7-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase N-terminal domain-containing protein 0.9919 1 69 GO:0000271
GO:0016616
GO:0016628
GO:0051287
AF-A0A1H5TZH5-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 0.9881 1 67 GO:0016616
GO:0051287
AF-A0A2N5ZB85-F1-model_v4 UDP-glucose 6-dehydrogenase 0.9871 335 440 GO:0016616
GO:0051287

Map