F409529

General Info

Members Datasets Scaffolds Average Seq Length
329 162 324 424

Family's Representative Sequence

Representative Sequence 3300005336|Ga0070680_100024255|Ga0070680_1000242552
Length 482
Sequence VQNPSPTGRGCPEGAGEGPLSDGATPSAQNLQFECSHPQALRATFSRREKGRAGCELDPHAMTAPTPHADPACAGVDLPALARRVGTPCHVYSASAIRERIDALQTALHGLDARVCYAAKANSNIAILQLMTDAGLGADIVSVGELRRCLRAGIPADRIVFSGVGKTAEEIADALDAGVARFNVESADELQLLQRVASKRGVIANASARINPDVDALTHVKISTGKSENKFGVSIDEARDWFANVAALTHVQLDGLHVHIGSQMLSLAPIRAALRRVAEFWRELAGAGHTIRSIDVGGGLGVCYRVGHDHPVSIDDYADAIREALAGYEGRILLEPGRWLVAEAGVLLTRVVRVKRGQQRQFLILNAAMTELIRPSLYDAWHDMVPLVDKSRPLQTYDIVGPVCETGDTFARDRTLPECKAGDLVMIKATGAYGASMASTYNSRPLAAEVLLDQGRYTVVRRRQTFEEMIAGEQSAQQWEHA

Samples

Sample ID Description Type Environment
1 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
2 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
3 2643221695 Lysobacter sp. Root494 Isolate Unclassified
4 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
5 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
6 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
7 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
8 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
9 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
10 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
11 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
12 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
13 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
14 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
15 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
22 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
25 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
26 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
27 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
28 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
62 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
63 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
64 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
68 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
69 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
70 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
71 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
72 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
111 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
120 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
121 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
122 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
123 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
124 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
125 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
126 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
127 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
128 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
137 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
138 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
139 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
149 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
150 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
162 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.57
Metatranscriptomes 0.91
Isolates 1.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.77
Nodule 0
Rhizoplane 1.52
Rhizosphere 80.55
Stem 0
Stem Tuber 0
Unclassified 5.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000179 3300001915 Bacteria 18248
2 JGI24741J21665_1010434 3300001915 Bacteria 1662
3 JGI24740J21852_10010788 3300001979 Bacteria 3499
4 JGI24740J21852_10016115 3300001979 Bacteria 2709
5 JGI24739J22299_10029567 3300001989 Bacteria 1904
6 JGI25162J39368_1002251 3300002737 Bacteria 7851
7 JGI25162J39368_1002770 3300002737 Bacteria 6231
8 JGI25157J39369_1001487 3300002741 Bacteria 8626
9 JGI25164J39214_1001052 3300002772 Bacteria 8266
10 JGI25164J39214_1001056 3300002772 Bacteria 8230
11 JGI25151J46595_10020886 3300003187 Bacteria 2750
12 JGI25165J46597_1001927 3300003214 Bacteria 8230
13 JGI25165J46597_1003776 3300003214 Bacteria 3560
14 JGI25153J46596_10015795 3300003215 Bacteria 3056
15 Ga0006562J51391_1163071 3300003578 Bacteria 5812
16 Ga0006562J51391_1163072 3300003578 Bacteria 5740
17 Ga0055524_1006895 3300003775 Bacteria 4893
18 Ga0055530_10005018 3300003791 Bacteria 6526
19 Ga0055531_10002412 3300003794 Bacteria 12548
20 Ga0055531_10006180 3300003794 Bacteria 6843
21 Ga0055531_10010972 3300003794 Bacteria 4433
22 Ga0065165_1002820 3300005262 Bacteria 13603
23 Ga0065715_10090668 3300005293 Bacteria 6649
24 Ga0070670_100005183 3300005331 Bacteria 10971
25 Ga0068869_100116200 3300005334 Bacteria 2041
26 Ga0070666_10001404 3300005335 Bacteria 14560
27 Ga0070680_100007879 3300005336 Bacteria 8122
28 Ga0070680_100012481 3300005336 Bacteria 6604
29 Ga0070680_100024255 3300005336 Bacteria 4842
30 Ga0070680_100052111 3300005336 Bacteria 3341
31 Ga0070680_100136155 3300005336 Bacteria 2058
32 Ga0070682_100012915 3300005337 Bacteria 4794
33 Ga0068868_100024018 3300005338 Bacteria 4620
34 Ga0070691_10000734 3300005341 Bacteria 12858
35 Ga0070691_10012485 3300005341 Bacteria 3890
36 Ga0070661_100037782 3300005344 Bacteria 3513
37 Ga0070661_100053366 3300005344 Bacteria 2958
38 Ga0070692_10011801 3300005345 Bacteria 4025
39 Ga0070659_100051396 3300005366 Bacteria 3241
40 Ga0070667_100167064 3300005367 Bacteria 1941
41 Ga0070667_100193087 3300005367 Bacteria 1804
42 Ga0070714_100000070 3300005435 Bacteria 92555
43 Ga0070714_100008014 3300005435 Bacteria 8233
44 Ga0070663_100000978 3300005455 Bacteria 15510
45 Ga0070663_100017891 3300005455 Bacteria 4633
46 Ga0070663_100034720 3300005455 Bacteria 3494
47 Ga0070681_10006885 3300005458 Bacteria 11068
48 Ga0070681_10018662 3300005458 Bacteria 6937
49 Ga0070681_10028769 3300005458 Bacteria 5585
50 Ga0070681_10091614 3300005458 Bacteria 2990
51 Ga0070685_10000149 3300005466 Bacteria 45785
52 Ga0070679_100001336 3300005530 Bacteria 21763
53 Ga0070679_100004141 3300005530 Bacteria 13371
54 Ga0070679_100036845 3300005530 Bacteria 4855
55 Ga0070679_100064297 3300005530 Bacteria 3656
56 Ga0068853_100044183 3300005539 Bacteria 3814
57 Ga0070696_100003504 3300005546 Bacteria 10432
58 Ga0070696_100015882 3300005546 Bacteria 5061
59 Ga0070693_100004850 3300005547 Bacteria 6417
60 Ga0070665_100000285 3300005548 Bacteria 80546
61 Ga0068855_100009650 3300005563 Bacteria 11648
62 Ga0068855_100021573 3300005563 Bacteria 7724
63 Ga0068855_100063891 3300005563 Bacteria 4294
64 Ga0068855_100120262 3300005563 Bacteria 3006
65 Ga0068855_100147146 3300005563 Bacteria 2681
66 Ga0068857_100035301 3300005577 Bacteria 4428
67 Ga0068857_100119270 3300005577 Bacteria 2374
68 Ga0068854_100000745 3300005578 Bacteria 19262
69 Ga0068854_100010878 3300005578 Bacteria 5905
70 Ga0068854_100029914 3300005578 Bacteria 3775
71 Ga0068854_100163846 3300005578 Bacteria 1724
72 Ga0068852_100092089 3300005616 Bacteria 2714
73 Ga0068851_10001420 3300005834 Bacteria 10481
74 Ga0068851_10038355 3300005834 Bacteria 2403
75 Ga0068858_100002328 3300005842 Bacteria 19212
76 Ga0105240_10002458 3300009093 Bacteria 29778
77 Ga0105240_10010720 3300009093 Bacteria 12861
78 Ga0105240_10011615 3300009093 Bacteria 12250
79 Ga0105240_10031227 3300009093 Bacteria 6912
80 Ga0105240_10037384 3300009093 Bacteria 6241
81 Ga0105240_10058133 3300009093 Bacteria 4828
82 Ga0105240_10193231 3300009093 Bacteria 2392
83 Ga0105240_10199568 3300009093 Bacteria 2345
84 Ga0105241_10007932 3300009174 Bacteria 7807
85 Ga0105241_10047107 3300009174 Bacteria 3277
86 Ga0105242_10003187 3300009176 Bacteria 12787
87 Ga0105237_10000011 3300009545 Bacteria 307361
88 Ga0105237_10016450 3300009545 Bacteria 7684
89 Ga0105237_10100807 3300009545 Bacteria 2879
90 Ga0105238_10029736 3300009551 Bacteria 5564
91 Ga0105238_10047823 3300009551 Bacteria 4312
92 Ga0105238_10056477 3300009551 Bacteria 3938
93 Ga0105238_10106384 3300009551 Bacteria 2787
94 Ga0105238_10228368 3300009551 Bacteria 1838
95 Ga0105239_10001861 3300010375 Bacteria 27602
96 Ga0105239_10109733 3300010375 Bacteria 3058
97 Ga0105239_10146539 3300010375 Bacteria 2633
98 Ga0105239_10214799 3300010375 Bacteria 2156
99 Ga0157314_1000039 3300012500 Bacteria 12878
100 Ga0157373_10201184 3300013100 Bacteria 1404
101 Ga0157370_10011246 3300013104 Bacteria 9382
102 Ga0157370_10016475 3300013104 Bacteria 7481
103 Ga0157370_10017339 3300013104 Bacteria 7268
104 Ga0157370_10020916 3300013104 Bacteria 6527
105 Ga0157369_10000001 3300013105 Bacteria 554908
106 Ga0157369_10085892 3300013105 Bacteria 3361
107 Ga0157369_10214946 3300013105 Bacteria 2014
108 Ga0157374_10019856 3300013296 Bacteria 5955
109 Ga0157372_10006137 3300013307 Bacteria 12768
110 Ga0157372_10013831 3300013307 Bacteria 8617
111 Ga0157375_10000154 3300013308 Bacteria 66940
112 Ga0157375_10136658 3300013308 Bacteria 2576
113 Ga0182008_10051632 3300014497 Bacteria 2039
114 Ga0157376_10167616 3300014969 Bacteria 1997
115 Ga0182006_1021985 3300015261 Bacteria 2655
116 Ga0182007_10003181 3300015262 Bacteria 7851
117 Ga0182007_10005900 3300015262 Bacteria 5319
118 Ga0183369_1004 3300015685 Bacteria 539301
119 Ga0206353_10839493 3300020082 Bacteria 3156
120 Ga0209674_101124 3300025226 Bacteria 7833
121 Ga0207427_100068 3300025231 Bacteria 164460
122 Ga0207427_100318 3300025231 Bacteria 32700
123 Ga0209437_100005 3300025233 Bacteria 1071596
124 Ga0209437_100255 3300025233 Bacteria 82963
125 Ga0209026_1000017 3300025250 Bacteria 385214
126 Ga0209759_1003126 3300025256 Bacteria 6771
127 Ga0209129_1003812 3300025258 Bacteria 6307
128 Ga0209233_1000011 3300025261 Bacteria 1071611
129 Ga0209233_1000415 3300025261 Bacteria 32711
130 Ga0209233_1000683 3300025261 Bacteria 16116
131 Ga0209130_1003280 3300025284 Bacteria 7048
132 Ga0209676_1000955 3300025292 Bacteria 35269
133 Ga0209676_1001654 3300025292 Bacteria 19485
134 Ga0209676_1006759 3300025292 Bacteria 5576
135 Ga0209025_1001283 3300025294 Bacteria 34499
136 Ga0209025_1006811 3300025294 Bacteria 8736
137 Ga0209025_1032307 3300025294 Bacteria 2450
138 Ga0209564_1002304 3300025295 Bacteria 15513
139 Ga0209758_1000301 3300025297 Bacteria 96998
140 Ga0209050_1002282 3300025298 Bacteria 16959
141 Ga0209050_1004352 3300025298 Bacteria 9621
142 Ga0209256_1000889 3300025299 Bacteria 36807
143 Ga0209256_1001158 3300025299 Bacteria 29827
144 Ga0209051_1007022 3300025303 Bacteria 6236
145 Ga0209257_1000255 3300025304 Bacteria 123098
146 Ga0209257_1000283 3300025304 Bacteria 113507
147 Ga0209257_1001545 3300025304 Bacteria 26779
148 Ga0209257_1001810 3300025304 Bacteria 23425
149 Ga0209257_1003924 3300025304 Bacteria 12092
150 Ga0207656_10026407 3300025321 Bacteria 2367
151 Ga0207680_10002699 3300025903 Bacteria 8292
152 Ga0207647_10001472 3300025904 Bacteria 18090
153 Ga0207647_10007122 3300025904 Bacteria 8108
154 Ga0207647_10013473 3300025904 Bacteria 5665
155 Ga0207705_10000490 3300025909 Bacteria 33720
156 Ga0207705_10008916 3300025909 Bacteria 7302
157 Ga0207705_10065508 3300025909 Bacteria 2626
158 Ga0207654_10023329 3300025911 Bacteria 3313
159 Ga0207707_10000032 3300025912 Bacteria 158499
160 Ga0207707_10000497 3300025912 Bacteria 40434
161 Ga0207707_10001387 3300025912 Bacteria 22491
162 Ga0207707_10001393 3300025912 Bacteria 22445
163 Ga0207707_10003007 3300025912 Bacteria 14993
164 Ga0207707_10012521 3300025912 Bacteria 7375
165 Ga0207707_10025778 3300025912 Bacteria 5141
166 Ga0207707_10028097 3300025912 Bacteria 4917
167 Ga0207695_10000040 3300025913 Bacteria 452787
168 Ga0207695_10000750 3300025913 Bacteria 62486
169 Ga0207695_10000802 3300025913 Bacteria 58681
170 Ga0207695_10008509 3300025913 Bacteria 12830
171 Ga0207695_10009331 3300025913 Bacteria 12142
172 Ga0207695_10012423 3300025913 Bacteria 10226
173 Ga0207695_10017632 3300025913 Bacteria 8297
174 Ga0207695_10034760 3300025913 Bacteria 5476
175 Ga0207695_10044110 3300025913 Bacteria 4746
176 Ga0207695_10067749 3300025913 Bacteria 3660
177 Ga0207671_10000011 3300025914 Bacteria 530349
178 Ga0207671_10101044 3300025914 Bacteria 2185
179 Ga0207660_10002405 3300025917 Bacteria 12302
180 Ga0207660_10002625 3300025917 Bacteria 11794
181 Ga0207660_10002751 3300025917 Bacteria 11522
182 Ga0207660_10004873 3300025917 Bacteria 8738
183 Ga0207660_10037115 3300025917 Bacteria 3393
184 Ga0207660_10072997 3300025917 Bacteria 2501
185 Ga0207660_10104677 3300025917 Bacteria 2119
186 Ga0207657_10006230 3300025919 Bacteria 12400
187 Ga0207657_10013394 3300025919 Bacteria 8047
188 Ga0207657_10031587 3300025919 Bacteria 4795
189 Ga0207649_10002860 3300025920 Bacteria 9525
190 Ga0207652_10000022 3300025921 Bacteria 158642
191 Ga0207652_10000026 3300025921 Bacteria 156183
192 Ga0207652_10009686 3300025921 Bacteria 7751
193 Ga0207652_10010722 3300025921 Bacteria 7379
194 Ga0207652_10026988 3300025921 Bacteria 4785
195 Ga0207694_10009323 3300025924 Bacteria 7404
196 Ga0207694_10009973 3300025924 Bacteria 7160
197 Ga0207694_10013621 3300025924 Bacteria 6130
198 Ga0207694_10022626 3300025924 Bacteria 4769
199 Ga0207650_10004163 3300025925 Bacteria 9885
200 Ga0207664_10000068 3300025929 Bacteria 107432
201 Ga0207664_10006057 3300025929 Bacteria 8282
202 Ga0207690_10002578 3300025932 Bacteria 10943
203 Ga0207690_10007627 3300025932 Bacteria 6419
204 Ga0207690_10020030 3300025932 Bacteria 4127
205 Ga0207706_10000981 3300025933 Bacteria 29038
206 Ga0207661_10027778 3300025944 Bacteria 4326
207 Ga0207667_10000132 3300025949 Bacteria 114101
208 Ga0207667_10000331 3300025949 Bacteria 65208
209 Ga0207667_10031152 3300025949 Bacteria 5760
210 Ga0207667_10041869 3300025949 Bacteria 4870
211 Ga0207667_10044319 3300025949 Bacteria 4714
212 Ga0207667_10205080 3300025949 Bacteria 2022
213 Ga0207667_10225829 3300025949 Bacteria 1918
214 Ga0207640_10000064 3300025981 Bacteria 86922
215 Ga0207640_10006674 3300025981 Bacteria 6341
216 Ga0207640_10013348 3300025981 Bacteria 4704
217 Ga0207640_10018409 3300025981 Bacteria 4105
218 Ga0207640_10122307 3300025981 Bacteria 1867
219 Ga0207658_10090932 3300025986 Bacteria 2366
220 Ga0207703_10001583 3300026035 Bacteria 20624
221 Ga0207639_10001763 3300026041 Bacteria 14558
222 Ga0207639_10001877 3300026041 Bacteria 14129
223 Ga0207639_10103544 3300026041 Bacteria 2306
224 Ga0207678_10002199 3300026067 Bacteria 17610
225 Ga0207678_10008737 3300026067 Bacteria 8917
226 Ga0207678_10015608 3300026067 Bacteria 6678
227 Ga0207678_10041081 3300026067 Bacteria 4010
228 Ga0207678_10049927 3300026067 Bacteria 3615
229 Ga0207678_10121975 3300026067 Bacteria 2224
230 Ga0207678_10122471 3300026067 Bacteria 2219
231 Ga0207702_10100927 3300026078 Bacteria 2547
232 Ga0207702_10214423 3300026078 Bacteria 1791
233 Ga0207674_10000055 3300026116 Bacteria 114021
234 Ga0207674_10011581 3300026116 Bacteria 9904
235 Ga0207674_10014305 3300026116 Bacteria 8769
236 Ga0209971_1008295 3300027682 Bacteria 2463
237 Ga0209974_10005675 3300027876 Bacteria 4380
238 Ga0209974_10011292 3300027876 Bacteria 3004
239 Ga0268266_10000007 3300028379 Bacteria 1372921
240 Ga0307413_10113121 3300031824 Bacteria 1821
241 Ga0307414_10001984 3300032004 Bacteria 10609
242 Ga0307414_10005372 3300032004 Bacteria 7051
243 Ga0307414_10109861 3300032004 Bacteria 2096
244 Ga0307411_10026398 3300032005 Bacteria 3497
245 Ga0307510_10000164 3300033180 Bacteria 56009
246 Ga0307510_10111271 3300033180 Bacteria 2479
247 Ga0395899_0147220 3300037312 Bacteria 1671
248 Ga0395900_0011133 3300037418 Bacteria 9192
249 Ga0395900_0034393 3300037418 Bacteria 5218
250 Ga0395900_0049639 3300037418 Bacteria 4323
251 Ga0395898_0002716 3300037466 Bacteria 20410
252 Ga0395898_0018402 3300037466 Bacteria 7123
253 Ga0395898_0101239 3300037466 Bacteria 2767
254 Ga0395898_0150374 3300037466 Bacteria 2228
255 Ga0395905_0038603 3300037471 Bacteria 4480
256 Ga0395901_0003960 3300038443 Bacteria 14893
257 Ga0439436_0004251 3300041404 Bacteria 4390
258 Ga0439465_0000333 3300041413 Bacteria 13446
259 Ga0451797_0136046 3300041453 Bacteria 2252
260 Ga0439449_0004199 3300042007 Bacteria 5566
261 Ga0466982_0000001 3300044672 Bacteria 514662
262 Ga0466971_0014012 3300044719 Bacteria 3524
263 Ga0466968_0000800 3300044735 Bacteria 10953
264 Ga0466958_0045405 3300045836 Bacteria 2650
265 Ga0495650_0000345 3300046471 Bacteria 82674
266 Ga0495663_0000544 3300046525 Bacteria 13291
267 Ga0495625_0011606 3300046660 Bacteria 7167
268 Ga0496102_0124063 3300048905 Bacteria 2413
269 Ga0496104_0000022 3300048907 Bacteria 237390
270 Ga0496105_0000028 3300048908 Bacteria 145917
271 Ga0496115_0000033 3300048918 Bacteria 136223
272 Ga0496118_0029842 3300048921 Bacteria 4564
273 Ga0496121_0006896 3300048924 Bacteria 13864
274 Ga0496123_0021235 3300048926 Bacteria 5052
275 Ga0496125_0000118 3300048928 Bacteria 176551
276 Ga0496126_0000340 3300048929 Bacteria 98226
277 Ga0501031_0084189 3300049568 Bacteria 2073
278 Ga0501032_0007575 3300049569 Bacteria 7927
279 Ga0501033_0133752 3300049570 Bacteria 1795
280 Ga0501034_0001561 3300049571 Bacteria 29945
281 Ga0501034_0047843 3300049571 Bacteria 4317
282 Ga0501036_0014028 3300049572 Bacteria 6660
283 Ga0501036_0169917 3300049572 Bacteria 1837
284 Ga0501038_0010095 3300049574 Bacteria 8644
285 Ga0501039_0097650 3300049575 Bacteria 2291
286 Ga0501039_0120241 3300049575 Bacteria 2058
287 Ga0501043_0057921 3300049579 Bacteria 3042
288 Ga0501047_0002981 3300049581 Bacteria 16059
289 Ga0501047_0004953 3300049581 Bacteria 12510
290 Ga0501047_0027669 3300049581 Bacteria 5463
291 Ga0501047_0068839 3300049581 Bacteria 3409
292 Ga0501047_0252434 3300049581 Bacteria 1612
293 Ga0501067_0000375 3300049583 Bacteria 24361
294 Ga0501068_0028643 3300049584 Bacteria 3295
295 Ga0501069_0001013 3300049585 Bacteria 13396
296 Ga0501069_0028352 3300049585 Bacteria 3069
297 Ga0501070_0000258 3300049586 Bacteria 50102
298 Ga0501070_0002004 3300049586 Bacteria 17906
299 Ga0501070_0014450 3300049586 Bacteria 6644
300 Ga0501070_0055832 3300049586 Bacteria 3273
301 Ga0501070_0068507 3300049586 Bacteria 2937
302 Ga0501070_0251654 3300049586 Bacteria 1445
303 Ga0501072_0000717 3300049588 Bacteria 24079
304 Ga0501073_0000747 3300049589 Bacteria 23006
305 Ga0501074_0001270 3300049590 Bacteria 16680
306 Ga0501074_0010271 3300049590 Bacteria 6794
307 Ga0501074_0022769 3300049590 Bacteria 4555
308 Ga0501079_0251490 3300049741 Bacteria 1381
309 Ga0501080_0000367 3300049742 Bacteria 34906
310 Ga0501080_0002784 3300049742 Bacteria 15348
311 Ga0501080_0018976 3300049742 Bacteria 6369
312 Ga0501080_0094240 3300049742 Bacteria 2781
313 Ga0501083_0028807 3300049744 Bacteria 3825
314 Ga0501035_0003620 3300049822 Bacteria 14737
315 Ga0501035_0027934 3300049822 Bacteria 5154
316 Ga0501035_0214134 3300049822 Bacteria 1647
317 Ga0501035_0233477 3300049822 Bacteria 1567
318 Ga0501035_0277177 3300049822 Bacteria 1418
319 Ga0501044_0002531 3300049823 Bacteria 20813
320 Ga0501044_0046940 3300049823 Bacteria 4469
321 Ga0501044_0048150 3300049823 Bacteria 4405
322 Ga0501044_0112050 3300049823 Bacteria 2735
323 Ga0501082_0048806 3300060353 Bacteria 3649
324 Ga0466962_0000529 3300061719 Bacteria 16717

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046525 Ga0495663_0000544 Ga0495663_0000544_5381_6601 361
2 3300048921 Ga0496118_0029842 Ga0496118_0029842_1148_2326 367
3 3300041413 Ga0439465_0000333 Ga0439465_0000333_11855_13108 372
4 3300049741 Ga0501079_0251490 Ga0501079_0251490_65_1261 373
5 3300049822 Ga0501035_0277177 Ga0501035_0277177_52_1248 373
6 3300048905 Ga0496102_0124063 Ga0496102_0124063_864_2069 376
7 3300037312 Ga0395899_0147220 Ga0395899_0147220_11_1219 377
8 3300049586 Ga0501070_0251654 Ga0501070_0251654_96_1313 379
9 3300049822 Ga0501035_0003620 Ga0501035_0003620_1490_2707 379
10 3300049823 Ga0501044_0112050 Ga0501044_0112050_1177_2394 379
11 3300003794 Ga0055531_10002412 Ga0055531_100024128 383
12 3300015685 Ga0183369_1004 Ga0183369_1004138 383
13 iso_pu_bacteria 8003014200 8003016270 384
14 3300003775 Ga0055524_1006895 Ga0055524_10068952 386
15 3300009176 Ga0105242_10003187 Ga0105242_100031875 386
16 3300013307 Ga0157372_10013831 Ga0157372_100138312 386
17 3300013308 Ga0157375_10000154 Ga0157375_1000015449 386
18 3300025292 Ga0209676_1001654 Ga0209676_100165415 386
19 3300025298 Ga0209050_1004352 Ga0209050_10043526 386
20 3300025299 Ga0209256_1000889 Ga0209256_100088918 386
21 3300025304 Ga0209257_1000255 Ga0209257_100025549 386
22 3300025304 Ga0209257_1001545 Ga0209257_100154510 386
23 3300048907 Ga0496104_0000022 Ga0496104_0000022_7185_8420 386
24 3300048908 Ga0496105_0000028 Ga0496105_0000028_69039_70274 386
25 3300003187 JGI25151J46595_10020886 JGI25151J46595_100208862 387
26 3300005336 Ga0070680_100012481 Ga0070680_1000124811 387
27 3300005458 Ga0070681_10018662 Ga0070681_100186621 387
28 3300005530 Ga0070679_100036845 Ga0070679_1000368451 387
29 3300025912 Ga0207707_10012521 Ga0207707_100125212 387
30 3300025921 Ga0207652_10026988 Ga0207652_100269882 387
31 3300003791 Ga0055530_10005018 Ga0055530_100050182 388
32 3300003794 Ga0055531_10006180 Ga0055531_100061802 388
33 3300025284 Ga0209130_1003280 Ga0209130_10032803 388
34 3300025295 Ga0209564_1002304 Ga0209564_100230413 388
35 3300025298 Ga0209050_1002282 Ga0209050_10022823 388
36 3300025299 Ga0209256_1001158 Ga0209256_100115826 388
37 3300025303 Ga0209051_1007022 Ga0209051_10070222 388
38 3300025304 Ga0209257_1000283 Ga0209257_100028381 388
39 3300005293 Ga0065715_10090668 Ga0065715_100906683 389
40 3300037471 Ga0395905_0038603 Ga0395905_0038603_3206_4453 389
41 3300003794 Ga0055531_10010972 Ga0055531_100109722 390
42 3300014969 Ga0157376_10167616 Ga0157376_101676162 390
43 3300025294 Ga0209025_1032307 Ga0209025_10323072 390
44 3300025304 Ga0209257_1001810 Ga0209257_100181013 390
45 3300049575 Ga0501039_0120241 Ga0501039_0120241_203_1471 390
46 3300005336 Ga0070680_100052111 Ga0070680_1000521112 391
47 3300005341 Ga0070691_10012485 Ga0070691_100124852 391
48 3300005344 Ga0070661_100037782 Ga0070661_1000377823 391
49 3300005345 Ga0070692_10011801 Ga0070692_100118013 391
50 3300005616 Ga0068852_100092089 Ga0068852_1000920892 391
51 3300025909 Ga0207705_10000490 Ga0207705_100004903 391
52 3300025913 Ga0207695_10044110 Ga0207695_100441103 391
53 3300025917 Ga0207660_10037115 Ga0207660_100371152 391
54 3300025919 Ga0207657_10031587 Ga0207657_100315872 391
55 3300025932 Ga0207690_10002578 Ga0207690_100025782 391
56 3300025949 Ga0207667_10031152 Ga0207667_100311522 391
57 3300026067 Ga0207678_10002199 Ga0207678_1000219911 391
58 3300044735 Ga0466968_0000800 Ga0466968_0000800_3968_5251 391
59 3300061719 Ga0466962_0000529 Ga0466962_0000529_14637_15920 391
60 3300014497 Ga0182008_10051632 Ga0182008_100516321 392
61 3300025294 Ga0209025_1006811 Ga0209025_10068115 392
62 3300025924 Ga0207694_10009973 Ga0207694_100099736 392
63 3300033180 Ga0307510_10000164 Ga0307510_1000016451 392
64 3300048926 Ga0496123_0021235 Ga0496123_0021235_2280_3551 393
65 3300032004 Ga0307414_10001984 Ga0307414_100019844 394
66 3300049568 Ga0501031_0084189 Ga0501031_0084189_692_1960 394
67 3300049571 Ga0501034_0047843 Ga0501034_0047843_203_1471 394
68 3300049574 Ga0501038_0010095 Ga0501038_0010095_7152_8420 394
69 3300049581 Ga0501047_0252434 Ga0501047_0252434_50_1318 394
70 3300049742 Ga0501080_0094240 Ga0501080_0094240_1286_2554 394
71 3300049822 Ga0501035_0214134 Ga0501035_0214134_95_1363 394
72 3300009093 Ga0105240_10058133 Ga0105240_100581334 395
73 3300025292 Ga0209676_1006759 Ga0209676_10067592 395
74 3300025294 Ga0209025_1001283 Ga0209025_100128319 395
75 3300025304 Ga0209257_1003924 Ga0209257_10039246 395
76 3300025913 Ga0207695_10008509 Ga0207695_1000850911 395
77 3300026067 Ga0207678_10041081 Ga0207678_100410812 395
78 3300033180 Ga0307510_10111271 Ga0307510_101112712 395
79 3300037466 Ga0395898_0101239 Ga0395898_0101239_422_1729 395
80 3300041404 Ga0439436_0004251 Ga0439436_0004251_326_1588 395
81 3300046471 Ga0495650_0000345 Ga0495650_0000345_32418_33713 395
82 3300046660 Ga0495625_0011606 Ga0495625_0011606_5361_6656 395
83 3300005336 Ga0070680_100024255 Ga0070680_1000242552 396
84 3300005455 Ga0070663_100000978 Ga0070663_1000009782 396
85 3300005458 Ga0070681_10091614 Ga0070681_100916142 396
86 3300005530 Ga0070679_100001336 Ga0070679_10000133614 396
87 3300005563 Ga0068855_100120262 Ga0068855_1001202622 396
88 3300013100 Ga0157373_10201184 Ga0157373_102011841 396
89 3300025912 Ga0207707_10000032 Ga0207707_10000032134 396
90 3300025917 Ga0207660_10002751 Ga0207660_100027517 396
91 3300025921 Ga0207652_10000026 Ga0207652_10000026134 396
92 3300025949 Ga0207667_10044319 Ga0207667_100443192 396
93 3300026067 Ga0207678_10015608 Ga0207678_100156082 396
94 3300027682 Ga0209971_1008295 Ga0209971_10082952 396
95 3300027876 Ga0209974_10005675 Ga0209974_100056753 396
96 3300031824 Ga0307413_10113121 Ga0307413_101131211 396
97 iso_pu_bacteria 2643221695 2644528107 396
98 3300032004 Ga0307414_10109861 Ga0307414_101098612 397
99 3300032005 Ga0307411_10026398 Ga0307411_100263982 397
100 3300042007 Ga0439449_0004199 Ga0439449_0004199_959_2230 397
101 3300005335 Ga0070666_10001404 Ga0070666_1000140411 398
102 3300005338 Ga0068868_100024018 Ga0068868_1000240182 398
103 3300005455 Ga0070663_100017891 Ga0070663_1000178912 398
104 3300005455 Ga0070663_100034720 Ga0070663_1000347203 398
105 3300005466 Ga0070685_10000149 Ga0070685_1000014924 398
106 3300005834 Ga0068851_10001420 Ga0068851_100014202 398
107 3300009093 Ga0105240_10002458 Ga0105240_1000245824 398
108 3300009551 Ga0105238_10106384 Ga0105238_101063842 398
109 3300009551 Ga0105238_10228368 Ga0105238_102283682 398
110 3300013105 Ga0157369_10085892 Ga0157369_100858923 398
111 3300025903 Ga0207680_10002699 Ga0207680_100026994 398
112 3300025913 Ga0207695_10000040 Ga0207695_1000004044 398
113 3300025933 Ga0207706_10000981 Ga0207706_1000098112 398
114 3300026067 Ga0207678_10049927 Ga0207678_100499272 398
115 3300032004 Ga0307414_10005372 Ga0307414_100053724 398
116 iso_pu_bacteria 2537561836 2538833644 398
117 iso_pu_bacteria 2643221562 2643829131 398
118 3300002737 JGI25162J39368_1002251 JGI25162J39368_10022514 399
119 3300002741 JGI25157J39369_1001487 JGI25157J39369_10014873 399
120 3300002772 JGI25164J39214_1001056 JGI25164J39214_10010562 399
121 3300003214 JGI25165J46597_1001927 JGI25165J46597_10019274 399
122 3300005334 Ga0068869_100116200 Ga0068869_1001162002 399
123 3300005344 Ga0070661_100053366 Ga0070661_1000533662 399
124 3300005366 Ga0070659_100051396 Ga0070659_1000513962 399
125 3300005367 Ga0070667_100167064 Ga0070667_1001670642 399
126 3300005367 Ga0070667_100193087 Ga0070667_1001930872 399
127 3300005539 Ga0068853_100044183 Ga0068853_1000441832 399
128 3300005563 Ga0068855_100021573 Ga0068855_1000215736 399
129 3300005577 Ga0068857_100119270 Ga0068857_1001192702 399
130 3300005834 Ga0068851_10038355 Ga0068851_100383552 399
131 3300009174 Ga0105241_10047107 Ga0105241_100471072 399
132 3300010375 Ga0105239_10146539 Ga0105239_101465392 399
133 3300013105 Ga0157369_10214946 Ga0157369_102149462 399
134 3300013307 Ga0157372_10006137 Ga0157372_100061372 399
135 3300015262 Ga0182007_10005900 Ga0182007_100059004 399
136 3300025226 Ga0209674_101124 Ga0209674_1011243 399
137 3300025231 Ga0207427_100318 Ga0207427_10031820 399
138 3300025233 Ga0209437_100255 Ga0209437_10025520 399
139 3300025250 Ga0209026_1000017 Ga0209026_100001788 399
140 3300025256 Ga0209759_1003126 Ga0209759_10031261 399
141 3300025261 Ga0209233_1000415 Ga0209233_100041519 399
142 3300025904 Ga0207647_10007122 Ga0207647_100071226 399
143 3300025913 Ga0207695_10000750 Ga0207695_1000075044 399
144 3300025919 Ga0207657_10006230 Ga0207657_100062307 399
145 3300025920 Ga0207649_10002860 Ga0207649_100028604 399
146 3300026041 Ga0207639_10001877 Ga0207639_100018775 399
147 3300026078 Ga0207702_10214423 Ga0207702_102144232 399
148 3300026116 Ga0207674_10011581 Ga0207674_100115815 399
149 3300038443 Ga0395901_0003960 Ga0395901_0003960_6368_7660 399
150 3300041453 Ga0451797_0136046 Ga0451797_0136046_845_2131 399
151 iso_pu_bacteria 2939611941 2939613136 399
152 3300001979 JGI24740J21852_10016115 JGI24740J21852_100161152 400
153 3300001989 JGI24739J22299_10029567 JGI24739J22299_100295672 400
154 3300003215 JGI25153J46596_10015795 JGI25153J46596_100157952 400
155 3300003578 Ga0006562J51391_1163071 Ga0006562J51391_11630715 400
156 3300003578 Ga0006562J51391_1163072 Ga0006562J51391_11630721 400
157 3300005563 Ga0068855_100063891 Ga0068855_1000638913 400
158 3300005578 Ga0068854_100029914 Ga0068854_1000299143 400
159 3300009093 Ga0105240_10031227 Ga0105240_100312275 400
160 3300009545 Ga0105237_10000011 Ga0105237_1000001171 400
161 3300012500 Ga0157314_1000039 Ga0157314_10000397 400
162 3300013296 Ga0157374_10019856 Ga0157374_100198562 400
163 3300025258 Ga0209129_1003812 Ga0209129_10038123 400
164 3300025297 Ga0209758_1000301 Ga0209758_100030174 400
165 3300025913 Ga0207695_10000802 Ga0207695_1000080252 400
166 3300025914 Ga0207671_10000011 Ga0207671_1000001170 400
167 3300025949 Ga0207667_10000331 Ga0207667_100003318 400
168 3300025981 Ga0207640_10013348 Ga0207640_100133481 400
169 3300026067 Ga0207678_10121975 Ga0207678_101219751 400
170 3300026116 Ga0207674_10000055 Ga0207674_1000005591 400
171 3300044672 Ga0466982_0000001 Ga0466982_0000001_102968_104251 400
172 3300044719 Ga0466971_0014012 Ga0466971_0014012_903_2186 400
173 3300045836 Ga0466958_0045405 Ga0466958_0045405_765_2048 400
174 3300048918 Ga0496115_0000033 Ga0496115_0000033_82570_83847 400
175 3300048924 Ga0496121_0006896 Ga0496121_0006896_8072_9352 400
176 3300048928 Ga0496125_0000118 Ga0496125_0000118_47013_48293 400
177 3300048929 Ga0496126_0000340 Ga0496126_0000340_74164_75441 400
178 3300005262 Ga0065165_1002820 Ga0065165_10028206 401
179 3300005336 Ga0070680_100007879 Ga0070680_1000078792 401
180 3300005435 Ga0070714_100008014 Ga0070714_1000080142 401
181 3300005458 Ga0070681_10006885 Ga0070681_100068856 401
182 3300005530 Ga0070679_100004141 Ga0070679_1000041418 401
183 3300005563 Ga0068855_100009650 Ga0068855_1000096502 401
184 3300005578 Ga0068854_100000745 Ga0068854_10000074516 401
185 3300009093 Ga0105240_10010720 Ga0105240_1001072011 401
186 3300010375 Ga0105239_10109733 Ga0105239_101097333 401
187 3300013104 Ga0157370_10011246 Ga0157370_100112462 401
188 3300013104 Ga0157370_10017339 Ga0157370_100173392 401
189 3300013104 Ga0157370_10020916 Ga0157370_100209162 401
190 3300015261 Ga0182006_1021985 Ga0182006_10219852 401
191 3300015262 Ga0182007_10003181 Ga0182007_100031812 401
192 3300025912 Ga0207707_10001387 Ga0207707_100013877 401
193 3300025913 Ga0207695_10017632 Ga0207695_100176322 401
194 3300025914 Ga0207671_10101044 Ga0207671_101010442 401
195 3300025917 Ga0207660_10002625 Ga0207660_100026258 401
196 3300025921 Ga0207652_10000022 Ga0207652_10000022109 401
197 3300025924 Ga0207694_10009323 Ga0207694_100093232 401
198 3300025929 Ga0207664_10006057 Ga0207664_100060578 401
199 3300025949 Ga0207667_10000132 Ga0207667_1000013264 401
200 3300025949 Ga0207667_10205080 Ga0207667_102050802 401
201 3300025981 Ga0207640_10000064 Ga0207640_1000006464 401
202 3300027876 Ga0209974_10011292 Ga0209974_100112922 401
203 3300049569 Ga0501032_0007575 Ga0501032_0007575_3966_5273 401
204 3300049570 Ga0501033_0133752 Ga0501033_0133752_339_1646 401
205 3300049571 Ga0501034_0001561 Ga0501034_0001561_17043_18350 401
206 3300049572 Ga0501036_0014028 Ga0501036_0014028_5069_6352 401
207 3300049575 Ga0501039_0097650 Ga0501039_0097650_587_1894 401
208 3300049579 Ga0501043_0057921 Ga0501043_0057921_740_2047 401
209 3300049581 Ga0501047_0002981 Ga0501047_0002981_12313_13620 401
210 3300049583 Ga0501067_0000375 Ga0501067_0000375_1406_2713 401
211 3300049584 Ga0501068_0028643 Ga0501068_0028643_101_1408 401
212 3300049585 Ga0501069_0001013 Ga0501069_0001013_9187_10494 401
213 3300049586 Ga0501070_0002004 Ga0501070_0002004_10859_12166 401
214 3300049586 Ga0501070_0014450 Ga0501070_0014450_5285_6568 401
215 3300049586 Ga0501070_0055832 Ga0501070_0055832_1691_2974 401
216 3300049588 Ga0501072_0000717 Ga0501072_0000717_11596_12903 401
217 3300049589 Ga0501073_0000747 Ga0501073_0000747_11178_12485 401
218 3300049590 Ga0501074_0022769 Ga0501074_0022769_23_1330 401
219 3300049742 Ga0501080_0002784 Ga0501080_0002784_2992_4299 401
220 3300049744 Ga0501083_0028807 Ga0501083_0028807_749_2056 401
221 3300049822 Ga0501035_0233477 Ga0501035_0233477_88_1377 401
222 3300049823 Ga0501044_0002531 Ga0501044_0002531_13766_15073 401
223 3300060353 Ga0501082_0048806 Ga0501082_0048806_1376_2683 401
224 3300001915 JGI24741J21665_1000179 JGI24741J21665_100017911 402
225 3300001915 JGI24741J21665_1010434 JGI24741J21665_10104342 402
226 3300001979 JGI24740J21852_10010788 JGI24740J21852_100107882 402
227 3300002737 JGI25162J39368_1002770 JGI25162J39368_10027701 402
228 3300002772 JGI25164J39214_1001052 JGI25164J39214_10010522 402
229 3300003214 JGI25165J46597_1003776 JGI25165J46597_10037762 402
230 3300005331 Ga0070670_100005183 Ga0070670_1000051832 402
231 3300005336 Ga0070680_100136155 Ga0070680_1001361552 402
232 3300005337 Ga0070682_100012915 Ga0070682_1000129153 402
233 3300005341 Ga0070691_10000734 Ga0070691_100007348 402
234 3300005435 Ga0070714_100000070 Ga0070714_10000007070 402
235 3300005458 Ga0070681_10028769 Ga0070681_100287693 402
236 3300005530 Ga0070679_100064297 Ga0070679_1000642972 402
237 3300005546 Ga0070696_100003504 Ga0070696_1000035047 402
238 3300005546 Ga0070696_100015882 Ga0070696_1000158824 402
239 3300005547 Ga0070693_100004850 Ga0070693_1000048502 402
240 3300005548 Ga0070665_100000285 Ga0070665_100000285154 402
241 3300005563 Ga0068855_100147146 Ga0068855_1001471462 402
242 3300005577 Ga0068857_100035301 Ga0068857_1000353013 402
243 3300005578 Ga0068854_100010878 Ga0068854_1000108782 402
244 3300005578 Ga0068854_100163846 Ga0068854_1001638462 402
245 3300005842 Ga0068858_100002328 Ga0068858_10000232813 402
246 3300009093 Ga0105240_10011615 Ga0105240_100116156 402
247 3300009093 Ga0105240_10037384 Ga0105240_100373844 402
248 3300009093 Ga0105240_10193231 Ga0105240_101932312 402
249 3300009093 Ga0105240_10199568 Ga0105240_101995682 402
250 3300009174 Ga0105241_10007932 Ga0105241_100079322 402
251 3300009545 Ga0105237_10016450 Ga0105237_100164503 402
252 3300009545 Ga0105237_10100807 Ga0105237_101008072 402
253 3300009551 Ga0105238_10029736 Ga0105238_100297362 402
254 3300009551 Ga0105238_10047823 Ga0105238_100478232 402
255 3300009551 Ga0105238_10056477 Ga0105238_100564772 402
256 3300010375 Ga0105239_10001861 Ga0105239_100018617 402
257 3300010375 Ga0105239_10214799 Ga0105239_102147991 402
258 3300013104 Ga0157370_10016475 Ga0157370_100164756 402
259 3300013105 Ga0157369_10000001 Ga0157369_10000001441 402
260 3300013308 Ga0157375_10136658 Ga0157375_101366581 402
261 3300020082 Ga0206353_10839493 Ga0206353_108394932 402
262 3300025231 Ga0207427_100068 Ga0207427_10006820 402
263 3300025233 Ga0209437_100005 Ga0209437_100005516 402
264 3300025261 Ga0209233_1000011 Ga0209233_1000011426 402
265 3300025261 Ga0209233_1000683 Ga0209233_100068311 402
266 3300025292 Ga0209676_1000955 Ga0209676_100095510 402
267 3300025321 Ga0207656_10026407 Ga0207656_100264072 402
268 3300025904 Ga0207647_10001472 Ga0207647_100014723 402
269 3300025904 Ga0207647_10013473 Ga0207647_100134736 402
270 3300025909 Ga0207705_10008916 Ga0207705_100089164 402
271 3300025909 Ga0207705_10065508 Ga0207705_100655082 402
272 3300025911 Ga0207654_10023329 Ga0207654_100233291 402
273 3300025912 Ga0207707_10000497 Ga0207707_1000049749 402
274 3300025912 Ga0207707_10001393 Ga0207707_1000139316 402
275 3300025912 Ga0207707_10003007 Ga0207707_100030079 402
276 3300025912 Ga0207707_10025778 Ga0207707_100257781 402
277 3300025912 Ga0207707_10028097 Ga0207707_100280973 402
278 3300025913 Ga0207695_10009331 Ga0207695_100093315 402
279 3300025913 Ga0207695_10012423 Ga0207695_100124233 402
280 3300025913 Ga0207695_10034760 Ga0207695_100347603 402
281 3300025913 Ga0207695_10067749 Ga0207695_100677492 402
282 3300025917 Ga0207660_10002405 Ga0207660_100024055 402
283 3300025917 Ga0207660_10004873 Ga0207660_100048735 402
284 3300025917 Ga0207660_10072997 Ga0207660_100729972 402
285 3300025917 Ga0207660_10104677 Ga0207660_101046772 402
286 3300025919 Ga0207657_10013394 Ga0207657_100133944 402
287 3300025921 Ga0207652_10009686 Ga0207652_100096863 402
288 3300025921 Ga0207652_10010722 Ga0207652_100107221 402
289 3300025924 Ga0207694_10013621 Ga0207694_100136212 402
290 3300025924 Ga0207694_10022626 Ga0207694_100226263 402
291 3300025925 Ga0207650_10004163 Ga0207650_100041632 402
292 3300025929 Ga0207664_10000068 Ga0207664_1000006870 402
293 3300025932 Ga0207690_10007627 Ga0207690_100076274 402
294 3300025932 Ga0207690_10020030 Ga0207690_100200302 402
295 3300025944 Ga0207661_10027778 Ga0207661_100277784 402
296 3300025949 Ga0207667_10041869 Ga0207667_100418692 402
297 3300025949 Ga0207667_10225829 Ga0207667_102258292 402
298 3300025981 Ga0207640_10006674 Ga0207640_100066742 402
299 3300025981 Ga0207640_10018409 Ga0207640_100184092 402
300 3300025981 Ga0207640_10122307 Ga0207640_101223072 402
301 3300025986 Ga0207658_10090932 Ga0207658_100909322 402
302 3300026035 Ga0207703_10001583 Ga0207703_100015833 402
303 3300026041 Ga0207639_10001763 Ga0207639_100017635 402
304 3300026041 Ga0207639_10103544 Ga0207639_101035442 402
305 3300026067 Ga0207678_10008737 Ga0207678_100087374 402
306 3300026067 Ga0207678_10122471 Ga0207678_101224712 402
307 3300026078 Ga0207702_10100927 Ga0207702_101009272 402
308 3300026116 Ga0207674_10014305 Ga0207674_100143054 402
309 3300028379 Ga0268266_10000007 Ga0268266_100000071182 402
310 3300037418 Ga0395900_0011133 Ga0395900_0011133_5439_6722 402
311 3300037418 Ga0395900_0034393 Ga0395900_0034393_2344_3627 402
312 3300037418 Ga0395900_0049639 Ga0395900_0049639_2468_3751 402
313 3300037466 Ga0395898_0002716 Ga0395898_0002716_18090_19373 402
314 3300037466 Ga0395898_0018402 Ga0395898_0018402_750_2033 402
315 3300037466 Ga0395898_0150374 Ga0395898_0150374_537_1820 402
316 3300049572 Ga0501036_0169917 Ga0501036_0169917_324_1607 402
317 3300049581 Ga0501047_0004953 Ga0501047_0004953_9661_10944 402
318 3300049581 Ga0501047_0027669 Ga0501047_0027669_2671_3954 402
319 3300049581 Ga0501047_0068839 Ga0501047_0068839_1535_2818 402
320 3300049585 Ga0501069_0028352 Ga0501069_0028352_1367_2650 402
321 3300049586 Ga0501070_0000258 Ga0501070_0000258_4245_5528 402
322 3300049586 Ga0501070_0068507 Ga0501070_0068507_1071_2354 402
323 3300049590 Ga0501074_0001270 Ga0501074_0001270_8971_10254 402
324 3300049590 Ga0501074_0010271 Ga0501074_0010271_3778_5061 402
325 3300049742 Ga0501080_0000367 Ga0501080_0000367_24525_25808 402
326 3300049742 Ga0501080_0018976 Ga0501080_0018976_3342_4625 402
327 3300049822 Ga0501035_0027934 Ga0501035_0027934_2824_4107 402
328 3300049823 Ga0501044_0046940 Ga0501044_0046940_3037_4320 402
329 3300049823 Ga0501044_0048150 Ga0501044_0048150_1434_2717 402

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02784

Orn_Arg_deC_N

Pyridoxal-dependent decarboxylase, pyridoxal binding domain

94

342

0.97

PF01168

Ala_racemase_N

Alanine racemase, N-terminal domain

92

302

0.83

PF00278

Orn_DAP_Arg_deC

Pyridoxal-dependent decarboxylase, C-terminal sheet domain

89

431

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
3c5q-assembly1.cif.gz_A-2 crystal structure of diaminopimelate decarboxylase (i148l mutant) from helicobacter pylori complexed with l-lysine 0.9429 24 389
2qgh-assembly1.cif.gz_A-2 crystal structure of diaminopimelate decarboxylase from helicobacter pylori complexed with l-lysine 0.9368 24 389
6n2f-assembly1.cif.gz_B meso-diaminopimelate decarboxylase from arabidopsis thaliana (isoform 2) 0.9178 22 392
4xg1-assembly1.cif.gz_B psychromonas ingrahamii diaminopimelate decarboxylase with llp 0.9177 19 393
4xg1-assembly2.cif.gz_C psychromonas ingrahamii diaminopimelate decarboxylase with llp 0.9159 20 393
ID Description Score Start End Superfamily
2qghA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.966 40 282 3.20.20.10
2p3eA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9634 40 282 3.20.20.10
2qghA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9582 40 282 3.20.20.10
2p3eA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.955 40 282 3.20.20.10
3vabA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9377 40 282 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A7V5KT84-F1-model_v4 Diaminopimelate decarboxylase 0.9824 21 160 GO:0008836
GO:0009089
AF-A0A661KV00-F1-model_v4 Diaminopimelate decarboxylase 0.9814 21 146 GO:0008836
GO:0009089
AF-A0A4Q3MIM2-F1-model_v4 Diaminopimelate decarboxylase 0.9812 32 227 GO:0008836
GO:0009089
AF-A0A7V2XL81-F1-model_v4 Diaminopimelate decarboxylase 0.9758 20 147 GO:0008836
GO:0009089
AF-A0A800IF44-F1-model_v4 Diaminopimelate decarboxylase 0.9755 22 160 GO:0006596
GO:0008836
GO:0009089

Feature Viewer

pLDDT pTM Quality
84.01 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map