F409049

General Info

Members Datasets Scaffolds Average Seq Length
328 196 299 337

Family's Representative Sequence

Representative Sequence 3300002067|JGI24735J21928_10021537|JGI24735J21928_100215372
Length 386
Sequence MITVDLRSDTVTKPTPGMLEAMFSAKVGDDVFGEDETINALEEKAAAMFGMEAGIYCPSGTMTNQIAIKCFTQPLDELIADQTAHVYRYEGGGIAFNSAVSARLLNGYRGILTADMIEPEINAENVHYPRTSLVVLENTVNKGGGACYTLDQIKPIAELCQQRGLKLHLDGARIFNALTHTGEKAIDYGKYFNGISVCLSKGLGAPVGSVLLADKETIKYARRVRKVLGGGMRQAGFLAAAGIYALDHHVERLKIDHAHARIIAEALAASPAVANVLPVETNIILFDTVKPADEVLQKLAAEGIHAMSTDKHRIRFVLHLDVHPEQVEHVVKVIGSLVHXQGNVETQXLASVMLVSRECETNETSETRFLDNLFKMSCLLILSETK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2738541283 Pedobacter sp. OK701 Isolate Unclassified
5 2738541284 Pedobacter sp. YR016 Isolate Unclassified
6 2738541302 Pedobacter sp. CF074 Isolate Unclassified
7 2739367651 Pedobacter sp. OK291 Isolate Unclassified
8 2739367656 Pedobacter sp. CF523 Isolate Unclassified
9 2739367663 Pedobacter sp. YR510 Isolate Unclassified
10 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
11 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
12 2818991437 Pedobacter terrae 518 Isolate Unclassified
13 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
14 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
15 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
16 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
17 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
18 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
19 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
20 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
21 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
22 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
23 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
24 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
25 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
26 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
27 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
28 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
29 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
30 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
31 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
32 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
33 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
34 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
35 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
36 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
37 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
38 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
39 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
40 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
41 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
42 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
43 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
44 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
45 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
46 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
47 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
48 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
49 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
50 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
51 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
52 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
53 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
54 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
55 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
56 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
57 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
58 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
59 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
60 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
61 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
62 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
63 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
64 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
65 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
66 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
67 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
68 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
72 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
73 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
74 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
75 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
76 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
77 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
78 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
79 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
80 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
81 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
82 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
83 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
84 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
85 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
86 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
87 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
88 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
89 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
90 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
91 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
92 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
93 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
94 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
95 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
96 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
97 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
98 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
99 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
100 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
103 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
104 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
132 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
134 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
135 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
136 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
137 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
138 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
139 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
140 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
141 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
142 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
143 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
144 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
145 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
146 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
147 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
148 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
149 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
150 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
151 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
152 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
153 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
154 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
155 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
156 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
157 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
158 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
159 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
160 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
161 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
162 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
163 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
164 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
165 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
166 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
167 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
168 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
169 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
170 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
171 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
172 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
173 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
174 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
175 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
176 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
177 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
178 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
179 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
180 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
181 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
182 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
183 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
184 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
185 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
186 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
187 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
188 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
189 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
190 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
191 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
192 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
193 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
194 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
195 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
196 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.16
Metatranscriptomes 0
Isolates 8.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.45
Nodule 0
Rhizoplane 0.91
Rhizosphere 78.66
Stem 0
Stem Tuber 0
Unclassified 10.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_196423 2162886007 Bacteria 2552
2 SwRhRL2b_contig_3406360 2162886007 Bacteria 10524
3 JGI24737J22298_10000218 3300001990 Bacteria 18823
4 JGI24737J22298_10015700 3300001990 Bacteria 2449
5 JGI24735J21928_10000001 3300002067 Bacteria 650042
6 JGI24735J21928_10021537 3300002067 Bacteria 1968
7 JGI25162J39368_1000427 3300002737 Bacteria 33903
8 JGI25152J39213_1000034 3300002773 Bacteria 94987
9 JGI25150J39212_1000001 3300002774 Bacteria 1318726
10 JGI25151J46595_10000001 3300003187 Bacteria 887211
11 JGI25165J46597_1000548 3300003214 Bacteria 34311
12 JGI25153J46596_10000001 3300003215 Bacteria 748985
13 rootH2_10006566 3300003320 Bacteria 99379
14 rootL2_10276262 3300003322 Bacteria 1848
15 rootH1_10025001 3300003323 Bacteria 8299
16 rootH1_10029634 3300003323 Bacteria 17261
17 rootH1_10039948 3300003323 Bacteria 1792
18 rootH1_10112483 3300003323 Bacteria 4453
19 rootH1_10246800 3300003323 Bacteria 1086
20 Ga0055536_1000001 3300003781 Bacteria 630663
21 Ga0055530_10006256 3300003791 Bacteria 5367
22 Ga0065714_10005038 3300005288 Bacteria 12582
23 Ga0065714_10005344 3300005288 Bacteria 3966
24 Ga0065714_10007298 3300005288 Bacteria 5654
25 Ga0065714_10065834 3300005288 Bacteria 8335
26 Ga0065704_10000210 3300005289 Bacteria 93612
27 Ga0065704_10141826 3300005289 Bacteria 1510
28 Ga0070658_10000045 3300005327 Bacteria 130728
29 Ga0070658_10119426 3300005327 Bacteria 2190
30 Ga0070676_10000502 3300005328 Bacteria 18694
31 Ga0070683_100014832 3300005329 Bacteria 6831
32 Ga0070680_100026855 3300005336 Bacteria 4606
33 Ga0070660_100056443 3300005339 Bacteria 3038
34 Ga0070660_100075786 3300005339 Bacteria 2634
35 Ga0070673_100005217 3300005364 Bacteria 8296
36 Ga0070659_100000042 3300005366 Bacteria 103672
37 Ga0070659_100007893 3300005366 Bacteria 7750
38 Ga0070663_100013896 3300005455 Bacteria 5150
39 Ga0070662_100000103 3300005457 Bacteria 46838
40 Ga0070681_10018112 3300005458 Bacteria 7042
41 Ga0068867_100003777 3300005459 Bacteria 10659
42 Ga0070679_100007348 3300005530 Bacteria 10294
43 Ga0070679_100106482 3300005530 Bacteria 2790
44 Ga0068853_100014242 3300005539 Bacteria 6509
45 Ga0068853_100167460 3300005539 Bacteria 1987
46 Ga0070665_100000083 3300005548 Bacteria 181044
47 Ga0068855_100000026 3300005563 Bacteria 175140
48 Ga0068855_100003118 3300005563 Bacteria 20278
49 Ga0068855_100051984 3300005563 Bacteria 4825
50 Ga0068855_100219498 3300005563 Bacteria 2133
51 Ga0068855_100242338 3300005563 Bacteria 2014
52 Ga0068855_100317769 3300005563 Unclassified 1722
53 Ga0068856_100000263 3300005614 Bacteria 57295
54 Ga0068856_100017272 3300005614 Bacteria 6993
55 Ga0068856_100020434 3300005614 Bacteria 6432
56 Ga0068856_100033423 3300005614 Bacteria 5035
57 Ga0068852_100005449 3300005616 Bacteria 9100
58 Ga0068851_10000117 3300005834 Bacteria 42529
59 Ga0070717_10025548 3300006028 Bacteria 4699
60 Ga0075366_10010284 3300006195 Bacteria 5249
61 Ga0075428_100003477 3300006844 Bacteria 17232
62 Ga0075429_100000334 3300006880 Bacteria 34171
63 Ga0099795_10010716 3300007788 Bacteria 2711
64 Ga0105244_10053342 3300009036 Bacteria 2055
65 Ga0105240_10005447 3300009093 Bacteria 18965
66 Ga0105240_10092498 3300009093 Bacteria 3693
67 Ga0105240_10168306 3300009093 Bacteria 2597
68 Ga0105240_10171147 3300009093 Bacteria 2572
69 Ga0111539_10006054 3300009094 Bacteria 15614
70 Ga0105243_10009284 3300009148 Bacteria 7504
71 Ga0105241_10085627 3300009174 Bacteria 2477
72 Ga0105242_10030631 3300009176 Bacteria 4296
73 Ga0105237_10001772 3300009545 Bacteria 27889
74 Ga0105237_10004250 3300009545 Bacteria 16669
75 Ga0105237_10052573 3300009545 Bacteria 4089
76 Ga0105237_10421333 3300009545 Bacteria 1340
77 Ga0105238_10036556 3300009551 Bacteria 4993
78 Ga0105249_10134076 3300009553 Bacteria 2368
79 Ga0105239_10000006 3300010375 Bacteria 442319
80 Ga0105239_10000578 3300010375 Bacteria 52273
81 Ga0105239_10013932 3300010375 Bacteria 8927
82 Ga0105239_10031177 3300010375 Bacteria 5865
83 Ga0105239_10101116 3300010375 Bacteria 3189
84 Ga0105239_10542337 3300010375 Bacteria 1324
85 Ga0105246_10209296 3300011119 Bacteria 1521
86 Ga0157373_10000276 3300013100 Bacteria 41315
87 Ga0157373_10001773 3300013100 Bacteria 16431
88 Ga0157373_10013413 3300013100 Bacteria 6011
89 Ga0157373_10032121 3300013100 Bacteria 3779
90 Ga0157373_10043757 3300013100 Bacteria 3198
91 Ga0157373_10173358 3300013100 Bacteria 1518
92 Ga0157371_10000141 3300013102 Bacteria 104396
93 Ga0157371_10000180 3300013102 Bacteria 92616
94 Ga0157371_10000803 3300013102 Bacteria 36021
95 Ga0157371_10002864 3300013102 Bacteria 16122
96 Ga0157371_10009325 3300013102 Bacteria 7736
97 Ga0157371_10094209 3300013102 Bacteria 2122
98 Ga0157370_10000562 3300013104 Bacteria 46367
99 Ga0157370_10002039 3300013104 Bacteria 24827
100 Ga0157370_10004266 3300013104 Bacteria 16466
101 Ga0157370_10009780 3300013104 Bacteria 10172
102 Ga0157370_10055755 3300013104 Bacteria 3763
103 Ga0157370_10081458 3300013104 Bacteria 3045
104 Ga0157370_10093009 3300013104 Bacteria 2830
105 Ga0157369_10000040 3300013105 Bacteria 183469
106 Ga0157369_10000940 3300013105 Bacteria 36995
107 Ga0157369_10066332 3300013105 Bacteria 3883
108 Ga0157369_10159470 3300013105 Bacteria 2381
109 Ga0157369_10240706 3300013105 Bacteria 1890
110 Ga0157369_10278263 3300013105 Unclassified 1743
111 Ga0157374_10000129 3300013296 Bacteria 69468
112 Ga0157374_10016021 3300013296 Bacteria 6585
113 Ga0157374_10524694 3300013296 Bacteria 1190
114 Ga0157378_10017378 3300013297 Bacteria 6311
115 Ga0157378_10173053 3300013297 Bacteria 2026
116 Ga0163162_10000068 3300013306 Bacteria 97068
117 Ga0163162_10069994 3300013306 Bacteria 3560
118 Ga0157372_10000061 3300013307 Bacteria 119814
119 Ga0157372_10002091 3300013307 Bacteria 21701
120 Ga0157372_10010840 3300013307 Bacteria 9704
121 Ga0157372_10269627 3300013307 Bacteria 1977
122 Ga0157372_10375789 3300013307 Bacteria 1656
123 Ga0157375_10020891 3300013308 Bacteria 5993
124 Ga0157375_10145898 3300013308 Bacteria 2497
125 Ga0157380_10000248 3300014326 Bacteria 32510
126 Ga0182008_10000006 3300014497 Bacteria 378521
127 Ga0182008_10000272 3300014497 Bacteria 40515
128 Ga0182008_10003116 3300014497 Bacteria 10148
129 Ga0182008_10036285 3300014497 Bacteria 2467
130 Ga0182008_10053923 3300014497 Bacteria 1990
131 Ga0182006_1000708 3300015261 Bacteria 23082
132 Ga0182006_1000903 3300015261 Bacteria 19885
133 Ga0182006_1006651 3300015261 Bacteria 5356
134 Ga0182007_10001756 3300015262 Bacteria 11388
135 Ga0182007_10005603 3300015262 Bacteria 5488
136 Ga0183373_1001 3300015682 Bacteria 1410374
137 Ga0163161_10000085 3300017792 Bacteria 93534
138 Ga0163161_10000249 3300017792 Bacteria 47891
139 Ga0163161_10000416 3300017792 Bacteria 35776
140 Ga0163161_10000425 3300017792 Bacteria 35535
141 Ga0163161_10168351 3300017792 Bacteria 1674
142 Ga0207427_100090 3300025231 Bacteria 133759
143 Ga0209437_100034 3300025233 Bacteria 494007
144 Ga0209437_100070 3300025233 Bacteria 306718
145 Ga0207425_1000002 3300025245 Bacteria 1362590
146 Ga0209026_1000453 3300025250 Bacteria 32465
147 Ga0209026_1004627 3300025250 Unclassified 4007
148 Ga0209129_1000002 3300025258 Bacteria 1359086
149 Ga0209233_1000038 3300025261 Bacteria 548972
150 Ga0209233_1010029 3300025261 Bacteria 2855
151 Ga0209455_1004536 3300025272 Bacteria 4510
152 Ga0209676_1000008 3300025292 Bacteria 991778
153 Ga0209025_1000004 3300025294 Bacteria 1361782
154 Ga0209758_1000006 3300025297 Bacteria 1359562
155 Ga0209050_1000055 3300025298 Bacteria 339254
156 Ga0207656_10000167 3300025321 Bacteria 24201
157 Ga0207647_10000062 3300025904 Bacteria 83809
158 Ga0207647_10000263 3300025904 Bacteria 43120
159 Ga0207699_10239978 3300025906 Bacteria 1245
160 Ga0207645_10000224 3300025907 Bacteria 46998
161 Ga0207705_10000080 3300025909 Bacteria 119562
162 Ga0207705_10093076 3300025909 Bacteria 2210
163 Ga0207707_10013803 3300025912 Bacteria 7045
164 Ga0207695_10000013 3300025913 Bacteria 821265
165 Ga0207695_10003717 3300025913 Bacteria 21241
166 Ga0207695_10004794 3300025913 Bacteria 18302
167 Ga0207695_10226756 3300025913 Bacteria 1774
168 Ga0207671_10001410 3300025914 Bacteria 27940
169 Ga0207671_10004324 3300025914 Bacteria 13650
170 Ga0207671_10005876 3300025914 Bacteria 11140
171 Ga0207671_10006722 3300025914 Bacteria 10184
172 Ga0207671_10058121 3300025914 Bacteria 2867
173 Ga0207660_10023058 3300025917 Bacteria 4200
174 Ga0207657_10067562 3300025919 Bacteria 3040
175 Ga0207652_10136391 3300025921 Bacteria 2191
176 Ga0207644_10002859 3300025931 Bacteria 11132
177 Ga0207690_10000289 3300025932 Bacteria 35735
178 Ga0207690_10216196 3300025932 Unclassified 1464
179 Ga0207706_10000851 3300025933 Bacteria 31416
180 Ga0207704_10000037 3300025938 Bacteria 93990
181 Ga0207665_10049191 3300025939 Bacteria 2832
182 Ga0207661_10182635 3300025944 Bacteria 1833
183 Ga0207667_10000022 3300025949 Bacteria 369570
184 Ga0207667_10049302 3300025949 Bacteria 4448
185 Ga0207667_10244859 3300025949 Bacteria 1834
186 Ga0207667_10284296 3300025949 Bacteria 1690
187 Ga0207651_10003243 3300025960 Bacteria 7964
188 Ga0207677_10212067 3300026023 Unclassified 1547
189 Ga0207639_10202015 3300026041 Bacteria 1705
190 Ga0207702_10000273 3300026078 Bacteria 59343
191 Ga0207702_10014812 3300026078 Bacteria 6468
192 Ga0207702_10039828 3300026078 Bacteria 3939
193 Ga0207702_10051178 3300026078 Bacteria 3489
194 Ga0207648_10000241 3300026089 Bacteria 58974
195 Ga0207675_100209095 3300026118 Bacteria 1876
196 Ga0207683_10058544 3300026121 Bacteria 3383
197 Ga0207698_10001086 3300026142 Bacteria 15810
198 Ga0207428_10003328 3300027907 Bacteria 15627
199 Ga0268266_10000095 3300028379 Bacteria 186169
200 Ga0265319_1021778 3300028563 Bacteria 2347
201 Ga0307517_10000719 3300028786 Bacteria 56987
202 Ga0307515_10000144 3300028794 Bacteria 170910
203 Ga0307515_10003557 3300028794 Bacteria 32734
204 Ga0307515_10018197 3300028794 Bacteria 12743
205 Ga0307515_10212881 3300028794 Bacteria 1772
206 Ga0265338_10096238 3300028800 Bacteria 2430
207 Ga0265328_10001579 3300031239 Bacteria 10502
208 Ga0265320_10033716 3300031240 Bacteria 2611
209 Ga0307509_10000224 3300031507 Bacteria 91320
210 Ga0307408_100000139 3300031548 Bacteria 80738
211 Ga0307405_10000003 3300031731 Bacteria 569064
212 Ga0307407_10000010 3300031903 Bacteria 186970
213 Ga0307412_10000055 3300031911 Bacteria 147100
214 Ga0307409_100035829 3300031995 Bacteria 3640
215 Ga0307416_100000014 3300032002 Bacteria 249053
216 Ga0307414_10002170 3300032004 Bacteria 10236
217 Ga0307414_10002283 3300032004 Bacteria 10019
218 Ga0307414_10020275 3300032004 Bacteria 4141
219 Ga0307414_10130706 3300032004 Bacteria 1949
220 Ga0307414_10188184 3300032004 Bacteria 1668
221 Ga0307507_10001815 3300033179 Bacteria 46860
222 Ga0395899_0000002 3300037312 Bacteria 1324310
223 Ga0395899_0000382 3300037312 Bacteria 52888
224 Ga0395899_0066656 3300037312 Bacteria 2643
225 Ga0395900_0000694 3300037418 Bacteria 44919
226 Ga0395900_0001938 3300037418 Bacteria 23442
227 Ga0395900_0006049 3300037418 Bacteria 12620
228 Ga0395898_0020606 3300037466 Bacteria 6697
229 Ga0395898_0396034 3300037466 Bacteria 1317
230 Ga0395905_0000841 3300037471 Bacteria 40055
231 Ga0395905_0002834 3300037471 Bacteria 18986
232 Ga0395901_0005109 3300038443 Bacteria 13255
233 Ga0395901_0080563 3300038443 Bacteria 3400
234 Ga0395901_0194316 3300038443 Bacteria 2128
235 Ga0395901_0399137 3300038443 Unclassified 1413
236 Ga0436365_0629267 3300039437 Bacteria 4871
237 Ga0436361_0215474 3300039447 Bacteria 8137
238 Ga0436363_1237848 3300039450 Bacteria 3315
239 Ga0451793_1643285 3300041452 Bacteria 1462
240 Ga0466969_0040405 3300044656 Bacteria 2337
241 Ga0466961_0043896 3300044693 Bacteria 2862
242 Ga0453684_0025080 3300044712 Bacteria 8675
243 Ga0453684_0031000 3300044712 Bacteria 7534
244 Ga0453684_0159352 3300044712 Bacteria 2671
245 Ga0466959_0190078 3300045049 Unclassified 1433
246 Ga0495650_0000014 3300046471 Bacteria 581606
247 Ga0495650_0056419 3300046471 Bacteria 1594
248 Ga0495585_0002526 3300046492 Bacteria 13003
249 Ga0495583_0030140 3300046506 Bacteria 2646
250 Ga0495606_0000241 3300046507 Bacteria 96663
251 Ga0495606_0012635 3300046507 Bacteria 6744
252 Ga0495606_0015622 3300046507 Bacteria 5836
253 Ga0495606_0084921 3300046507 Bacteria 1959
254 Ga0495610_0000113 3300046512 Bacteria 94595
255 Ga0495610_0000152 3300046512 Bacteria 76668
256 Ga0495610_0001644 3300046512 Bacteria 19645
257 Ga0495616_0001895 3300046513 Bacteria 14129
258 Ga0495648_0005664 3300046524 Bacteria 10334
259 Ga0495609_0039898 3300046538 Bacteria 2113
260 Ga0495633_0000027 3300046558 Bacteria 204613
261 Ga0495633_0011124 3300046558 Bacteria 4877
262 Ga0495668_0000010 3300046616 Bacteria 487308
263 Ga0495625_0000003 3300046660 Bacteria 686847
264 Ga0495625_0000381 3300046660 Bacteria 67732
265 Ga0495625_0000939 3300046660 Bacteria 39095
266 Ga0495661_0000244 3300046665 Bacteria 62633
267 Ga0495661_0015082 3300046665 Bacteria 5164
268 Ga0495661_0018841 3300046665 Bacteria 4532
269 Ga0495658_0157637 3300046683 Bacteria 1398
270 Ga0495649_0000002 3300046694 Bacteria 1093458
271 Ga0495660_0072235 3300046810 Bacteria 1828
272 Ga0495687_003277 3300047443 Bacteria 11922
273 Ga0495687_008905 3300047443 Bacteria 5682
274 Ga0495681_0023363 3300047470 Bacteria 3287
275 Ga0495684_0134669 3300047471 Bacteria 1854
276 Ga0495686_0002723 3300047472 Bacteria 16166
277 Ga0495686_0002885 3300047472 Bacteria 15434
278 Ga0495686_0029916 3300047472 Bacteria 3539
279 Ga0495686_0030351 3300047472 Bacteria 3511
280 Ga0496109_0536431 3300048912 Bacteria 1104
281 Ga0496122_0000404 3300048925 Bacteria 91618
282 Ga0496123_0021144 3300048926 Bacteria 5066
283 Ga0495678_010265 3300049459 Bacteria 4562
284 Ga0501241_001213 3300049758 Bacteria 5345
285 Ga0501280_006392 3300049776 Bacteria 1660
286 Ga0501204_004282 3300049850 Bacteria 1534
287 nmdc:mga0k408_521_c1 3300050493 Bacteria 21145
288 nmdc:mga0k408_66436_c1 3300050493 Bacteria 2101
289 nmdc:mga09592_1938_c1 3300050508 Bacteria 16654
290 nmdc:mga06r32_62_c1 3300050510 Bacteria 68174
291 nmdc:mga08y16_4022_c1 3300050511 Bacteria 15340
292 Ga0500635_0000332 3300053080 Bacteria 16185
293 Ga0500635_0000844 3300053080 Bacteria 7544
294 Ga0500651_0003271 3300053093 Bacteria 8822
295 Ga0500608_002103 3300053122 Bacteria 7145
296 Ga0500608_042283 3300053122 Bacteria 2187
297 Ga0500618_000013 3300053125 Bacteria 183026
298 Ga0500618_013062 3300053125 Bacteria 2157
299 Ga0500622_0002157 3300053156 Bacteria 14602

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048912 Ga0496109_0536431 Ga0496109_0536431_13_864 282
2 3300003781 Ga0055536_1000001 Ga0055536_1000001548 311
3 3300015682 Ga0183373_1001 Ga0183373_1001417 311
4 3300025292 Ga0209676_1000008 Ga0209676_1000008315 311
5 3300025298 Ga0209050_1000055 Ga0209050_100005597 311
6 3300005834 Ga0068851_10000117 Ga0068851_1000011726 315
7 3300025321 Ga0207656_10000167 Ga0207656_1000016714 315
8 3300025914 Ga0207671_10058121 Ga0207671_100581212 319
9 3300009553 Ga0105249_10134076 Ga0105249_101340762 320
10 3300044712 Ga0453684_0159352 Ga0453684_0159352_16_987 320
11 3300003323 rootH1_10246800 rootH1_102468001 321
12 3300005328 Ga0070676_10000502 Ga0070676_100005022 321
13 3300005364 Ga0070673_100005217 Ga0070673_1000052178 321
14 3300005459 Ga0068867_100003777 Ga0068867_10000377710 321
15 3300005539 Ga0068853_100167460 Ga0068853_1001674602 321
16 3300005616 Ga0068852_100005449 Ga0068852_1000054492 321
17 3300013297 Ga0157378_10173053 Ga0157378_101730532 321
18 3300025907 Ga0207645_10000224 Ga0207645_1000022427 321
19 3300025938 Ga0207704_10000037 Ga0207704_1000003770 321
20 3300025960 Ga0207651_10003243 Ga0207651_100032432 321
21 3300026041 Ga0207639_10202015 Ga0207639_102020152 321
22 3300026089 Ga0207648_10000241 Ga0207648_1000024146 321
23 3300026121 Ga0207683_10058544 Ga0207683_100585443 321
24 3300026142 Ga0207698_10001086 Ga0207698_100010865 321
25 3300047471 Ga0495684_0134669 Ga0495684_0134669_827_1801 324
26 3300013102 Ga0157371_10009325 Ga0157371_100093254 327
27 3300013104 Ga0157370_10055755 Ga0157370_100557552 327
28 3300013105 Ga0157369_10066332 Ga0157369_100663322 327
29 3300013104 Ga0157370_10081458 Ga0157370_100814582 328
30 3300026118 Ga0207675_100209095 Ga0207675_1002090952 328
31 3300003791 Ga0055530_10006256 Ga0055530_100062564 329
32 3300009036 Ga0105244_10053342 Ga0105244_100533422 329
33 3300013100 Ga0157373_10013413 Ga0157373_100134133 331
34 iso_pu_bacteria 2599185184 2599477294 333
35 iso_pu_bacteria 2852623160 2852624088 333
36 iso_pu_bacteria 2884933994 2884936990 333
37 iso_pu_bacteria 2928078545 2928079210 333
38 iso_pu_bacteria 2928147474 2928148418 333
39 iso_pu_bacteria 2932082852 2932085715 333
40 3300028794 Ga0307515_10212881 Ga0307515_102128812 334
41 iso_pu_bacteria 2739367866 2740034047 334
42 iso_pu_bacteria 2919437846 2919442305 334
43 iso_pu_bacteria 2977232053 2977236720 334
44 3300002737 JGI25162J39368_1000427 JGI25162J39368_100042717 336
45 3300003214 JGI25165J46597_1000548 JGI25165J46597_100054820 336
46 3300003320 rootH2_10006566 rootH2_1000656645 336
47 3300003323 rootH1_10025001 rootH1_1002500110 336
48 3300003323 rootH1_10029634 rootH1_1002963422 336
49 3300003323 rootH1_10112483 rootH1_101124834 336
50 3300005327 Ga0070658_10000045 Ga0070658_10000045117 336
51 3300005329 Ga0070683_100014832 Ga0070683_1000148327 336
52 3300005336 Ga0070680_100026855 Ga0070680_1000268553 336
53 3300005339 Ga0070660_100056443 Ga0070660_1000564432 336
54 3300005366 Ga0070659_100000042 Ga0070659_10000004258 336
55 3300005458 Ga0070681_10018112 Ga0070681_100181123 336
56 3300005530 Ga0070679_100007348 Ga0070679_1000073488 336
57 3300005539 Ga0068853_100014242 Ga0068853_1000142426 336
58 3300005548 Ga0070665_100000083 Ga0070665_10000008384 336
59 3300009093 Ga0105240_10168306 Ga0105240_101683063 336
60 3300009148 Ga0105243_10009284 Ga0105243_100092843 336
61 3300009545 Ga0105237_10001772 Ga0105237_100017726 336
62 3300009545 Ga0105237_10052573 Ga0105237_100525733 336
63 3300010375 Ga0105239_10031177 Ga0105239_100311775 336
64 3300013296 Ga0157374_10524694 Ga0157374_105246941 336
65 3300025231 Ga0207427_100090 Ga0207427_10009094 336
66 3300025233 Ga0209437_100034 Ga0209437_100034303 336
67 3300025250 Ga0209026_1004627 Ga0209026_10046274 336
68 3300025261 Ga0209233_1000038 Ga0209233_1000038303 336
69 3300025261 Ga0209233_1010029 Ga0209233_10100292 336
70 3300025272 Ga0209455_1004536 Ga0209455_10045364 336
71 3300025909 Ga0207705_10000080 Ga0207705_1000008010 336
72 3300025912 Ga0207707_10013803 Ga0207707_100138036 336
73 3300025913 Ga0207695_10000013 Ga0207695_10000013411 336
74 3300025914 Ga0207671_10001410 Ga0207671_100014106 336
75 3300025914 Ga0207671_10004324 Ga0207671_100043249 336
76 3300025914 Ga0207671_10005876 Ga0207671_100058762 336
77 3300025917 Ga0207660_10023058 Ga0207660_100230582 336
78 3300025919 Ga0207657_10067562 Ga0207657_100675622 336
79 3300025921 Ga0207652_10136391 Ga0207652_101363912 336
80 3300025932 Ga0207690_10000289 Ga0207690_1000028922 336
81 3300025944 Ga0207661_10182635 Ga0207661_101826352 336
82 3300028379 Ga0268266_10000095 Ga0268266_1000009588 336
83 3300028786 Ga0307517_10000719 Ga0307517_1000071922 336
84 3300028794 Ga0307515_10000144 Ga0307515_10000144133 336
85 3300028794 Ga0307515_10003557 Ga0307515_1000355718 336
86 3300032004 Ga0307414_10130706 Ga0307414_101307063 336
87 3300032004 Ga0307414_10188184 Ga0307414_101881841 336
88 3300033179 Ga0307507_10001815 Ga0307507_1000181513 336
89 3300037312 Ga0395899_0000002 Ga0395899_0000002_693999_695009 336
90 3300049850 Ga0501204_004282 Ga0501204_004282_189_1199 336
91 3300053080 Ga0500635_0000844 Ga0500635_0000844_2017_3027 336
92 3300053122 Ga0500608_002103 Ga0500608_002103_3127_4137 336
93 3300053125 Ga0500618_000013 Ga0500618_000013_106709_107719 336
94 iso_pu_bacteria 2585427687 2586210934 336
95 iso_pu_bacteria 2739367651 2739590941 336
96 iso_pu_bacteria 2739367656 2739616826 336
97 iso_pu_bacteria 2739367663 2739647181 336
98 iso_pu_bacteria 2839989709 2839991244 336
99 iso_pu_bacteria 2842722452 2842725306 336
100 iso_pu_bacteria 2842909656 2842912582 336
101 iso_pu_bacteria 2857627736 2857629640 336
102 iso_pu_bacteria 2945997725 2946002221 336
103 iso_pu_bacteria 2954016120 2954019125 336
104 3300001990 JGI24737J22298_10000218 JGI24737J22298_1000021811 337
105 3300002067 JGI24735J21928_10000001 JGI24735J21928_10000001331 337
106 3300003323 rootH1_10039948 rootH1_100399481 337
107 3300005339 Ga0070660_100075786 Ga0070660_1000757862 337
108 3300005455 Ga0070663_100013896 Ga0070663_1000138964 337
109 3300005457 Ga0070662_100000103 Ga0070662_10000010344 337
110 3300005530 Ga0070679_100106482 Ga0070679_1001064823 337
111 3300005563 Ga0068855_100000026 Ga0068855_100000026163 337
112 3300005563 Ga0068855_100051984 Ga0068855_1000519845 337
113 3300005563 Ga0068855_100317769 Ga0068855_1003177692 337
114 3300005614 Ga0068856_100033423 Ga0068856_1000334233 337
115 3300009093 Ga0105240_10005447 Ga0105240_100054476 337
116 3300009093 Ga0105240_10171147 Ga0105240_101711471 337
117 3300009174 Ga0105241_10085627 Ga0105241_100856273 337
118 3300009176 Ga0105242_10030631 Ga0105242_100306316 337
119 3300009545 Ga0105237_10421333 Ga0105237_104213332 337
120 3300009551 Ga0105238_10036556 Ga0105238_100365563 337
121 3300010375 Ga0105239_10000006 Ga0105239_1000000636 337
122 3300010375 Ga0105239_10101116 Ga0105239_101011163 337
123 3300010375 Ga0105239_10542337 Ga0105239_105423372 337
124 3300011119 Ga0105246_10209296 Ga0105246_102092962 337
125 3300013100 Ga0157373_10032121 Ga0157373_100321212 337
126 3300013102 Ga0157371_10094209 Ga0157371_100942091 337
127 3300013104 Ga0157370_10093009 Ga0157370_100930093 337
128 3300013105 Ga0157369_10000940 Ga0157369_1000094011 337
129 3300013105 Ga0157369_10159470 Ga0157369_101594701 337
130 3300013105 Ga0157369_10278263 Ga0157369_102782632 337
131 3300013296 Ga0157374_10000129 Ga0157374_1000012965 337
132 3300013296 Ga0157374_10016021 Ga0157374_100160213 337
133 3300013297 Ga0157378_10017378 Ga0157378_100173783 337
134 3300013306 Ga0163162_10000068 Ga0163162_1000006884 337
135 3300013307 Ga0157372_10002091 Ga0157372_1000209116 337
136 3300013307 Ga0157372_10010840 Ga0157372_1001084010 337
137 3300013307 Ga0157372_10269627 Ga0157372_102696271 337
138 3300013308 Ga0157375_10020891 Ga0157375_100208916 337
139 3300013308 Ga0157375_10145898 Ga0157375_101458982 337
140 3300014326 Ga0157380_10000248 Ga0157380_1000024816 337
141 3300025250 Ga0209026_1000453 Ga0209026_100045326 337
142 3300025904 Ga0207647_10000062 Ga0207647_1000006213 337
143 3300025913 Ga0207695_10003717 Ga0207695_1000371715 337
144 3300025931 Ga0207644_10002859 Ga0207644_100028595 337
145 3300025932 Ga0207690_10216196 Ga0207690_102161962 337
146 3300025933 Ga0207706_10000851 Ga0207706_1000085122 337
147 3300025949 Ga0207667_10000022 Ga0207667_1000002213 337
148 3300025949 Ga0207667_10284296 Ga0207667_102842962 337
149 3300026023 Ga0207677_10212067 Ga0207677_102120672 337
150 3300026078 Ga0207702_10051178 Ga0207702_100511782 337
151 3300037312 Ga0395899_0000382 Ga0395899_0000382_11731_12747 337
152 3300037312 Ga0395899_0066656 Ga0395899_0066656_164_1177 337
153 3300037418 Ga0395900_0000694 Ga0395900_0000694_7604_8617 337
154 3300037418 Ga0395900_0001938 Ga0395900_0001938_22295_23308 337
155 3300037418 Ga0395900_0006049 Ga0395900_0006049_9362_10375 337
156 3300037471 Ga0395905_0000841 Ga0395905_0000841_14381_15394 337
157 3300037471 Ga0395905_0002834 Ga0395905_0002834_6336_7349 337
158 3300038443 Ga0395901_0005109 Ga0395901_0005109_5268_6281 337
159 3300038443 Ga0395901_0080563 Ga0395901_0080563_2354_3367 337
160 3300039447 Ga0436361_0215474 Ga0436361_0215474_2993_4006 337
161 3300041452 Ga0451793_1643285 Ga0451793_1643285_42_1055 337
162 3300044656 Ga0466969_0040405 Ga0466969_0040405_1144_2160 337
163 3300044693 Ga0466961_0043896 Ga0466961_0043896_739_1755 337
164 3300046471 Ga0495650_0000014 Ga0495650_0000014_10660_11673 337
165 3300046492 Ga0495585_0002526 Ga0495585_0002526_3474_4487 337
166 3300046506 Ga0495583_0030140 Ga0495583_0030140_1595_2608 337
167 3300046507 Ga0495606_0012635 Ga0495606_0012635_2327_3340 337
168 3300046512 Ga0495610_0001644 Ga0495610_0001644_8614_9627 337
169 3300046513 Ga0495616_0001895 Ga0495616_0001895_144_1157 337
170 3300046524 Ga0495648_0005664 Ga0495648_0005664_1286_2299 337
171 3300046558 Ga0495633_0000027 Ga0495633_0000027_127256_128269 337
172 3300046558 Ga0495633_0011124 Ga0495633_0011124_24_1037 337
173 3300046616 Ga0495668_0000010 Ga0495668_0000010_15515_16528 337
174 3300046660 Ga0495625_0000003 Ga0495625_0000003_225132_226145 337
175 3300046660 Ga0495625_0000381 Ga0495625_0000381_14062_15075 337
176 3300046660 Ga0495625_0000939 Ga0495625_0000939_8175_9188 337
177 3300046665 Ga0495661_0000244 Ga0495661_0000244_4949_5962 337
178 3300046665 Ga0495661_0015082 Ga0495661_0015082_3119_4132 337
179 3300046665 Ga0495661_0018841 Ga0495661_0018841_602_1615 337
180 3300046683 Ga0495658_0157637 Ga0495658_0157637_200_1213 337
181 3300046694 Ga0495649_0000002 Ga0495649_0000002_780848_781861 337
182 3300047443 Ga0495687_003277 Ga0495687_003277_1308_2321 337
183 3300047443 Ga0495687_008905 Ga0495687_008905_838_1851 337
184 3300050493 nmdc:mga0k408_66436_c1 nmdc:mga0k408_66436_c1_957_1970 337
185 3300053122 Ga0500608_042283 Ga0500608_042283_1036_2049 337
186 iso_pu_bacteria 2738541283 2738756990 337
187 iso_pu_bacteria 2738541302 2738852067 337
188 iso_pu_bacteria 2818991437 2819546610 337
189 iso_pu_bacteria 2849281842 2849286204 337
190 iso_pu_bacteria 2898907183 2898908038 337
191 3300005327 Ga0070658_10119426 Ga0070658_101194262 338
192 3300005563 Ga0068855_100003118 Ga0068855_1000031182 338
193 3300005563 Ga0068855_100219498 Ga0068855_1002194982 338
194 3300005614 Ga0068856_100000263 Ga0068856_10000026353 338
195 3300005614 Ga0068856_100020434 Ga0068856_1000204343 338
196 3300006195 Ga0075366_10010284 Ga0075366_100102843 338
197 3300009093 Ga0105240_10092498 Ga0105240_100924983 338
198 3300010375 Ga0105239_10000578 Ga0105239_1000057812 338
199 3300010375 Ga0105239_10013932 Ga0105239_100139327 338
200 3300013306 Ga0163162_10069994 Ga0163162_100699942 338
201 3300025233 Ga0209437_100070 Ga0209437_10007032 338
202 3300025909 Ga0207705_10093076 Ga0207705_100930762 338
203 3300025913 Ga0207695_10226756 Ga0207695_102267562 338
204 3300025914 Ga0207671_10006722 Ga0207671_100067226 338
205 3300025949 Ga0207667_10049302 Ga0207667_100493025 338
206 3300025949 Ga0207667_10244859 Ga0207667_102448591 338
207 3300026078 Ga0207702_10000273 Ga0207702_1000027335 338
208 3300026078 Ga0207702_10014812 Ga0207702_100148123 338
209 3300028800 Ga0265338_10096238 Ga0265338_100962382 338
210 3300046507 Ga0495606_0000241 Ga0495606_0000241_71857_72873 338
211 3300046507 Ga0495606_0084921 Ga0495606_0084921_410_1426 338
212 3300046810 Ga0495660_0072235 Ga0495660_0072235_556_1572 338
213 3300047472 Ga0495686_0029916 Ga0495686_0029916_1060_2076 338
214 3300050493 nmdc:mga0k408_521_c1 nmdc:mga0k408_521_c1_8729_9745 338
215 3300053125 Ga0500618_013062 Ga0500618_013062_69_1085 338
216 3300053156 Ga0500622_0002157 Ga0500622_0002157_9154_10170 338
217 iso_pu_bacteria 2902048731 2902050298 338
218 3300001990 JGI24737J22298_10015700 JGI24737J22298_100157002 339
219 3300002773 JGI25152J39213_1000034 JGI25152J39213_100003427 339
220 3300002774 JGI25150J39212_1000001 JGI25150J39212_1000001231 339
221 3300003187 JGI25151J46595_10000001 JGI25151J46595_10000001569 339
222 3300003215 JGI25153J46596_10000001 JGI25153J46596_10000001458 339
223 3300005288 Ga0065714_10005344 Ga0065714_100053442 339
224 3300005366 Ga0070659_100007893 Ga0070659_1000078932 339
225 3300005563 Ga0068855_100242338 Ga0068855_1002423382 339
226 3300013102 Ga0157371_10000141 Ga0157371_1000014122 339
227 3300013104 Ga0157370_10002039 Ga0157370_100020398 339
228 3300013104 Ga0157370_10009780 Ga0157370_100097808 339
229 3300013105 Ga0157369_10000040 Ga0157369_1000004051 339
230 3300013105 Ga0157369_10240706 Ga0157369_102407062 339
231 3300013307 Ga0157372_10000061 Ga0157372_10000061110 339
232 3300013307 Ga0157372_10375789 Ga0157372_103757892 339
233 3300015261 Ga0182006_1000708 Ga0182006_100070827 339
234 3300017792 Ga0163161_10000416 Ga0163161_1000041637 339
235 3300017792 Ga0163161_10000425 Ga0163161_1000042533 339
236 3300025245 Ga0207425_1000002 Ga0207425_1000002934 339
237 3300025258 Ga0209129_1000002 Ga0209129_1000002934 339
238 3300025294 Ga0209025_1000004 Ga0209025_1000004256 339
239 3300025297 Ga0209758_1000006 Ga0209758_1000006256 339
240 3300025904 Ga0207647_10000263 Ga0207647_1000026311 339
241 3300031548 Ga0307408_100000139 Ga0307408_10000013964 339
242 3300031731 Ga0307405_10000003 Ga0307405_10000003344 339
243 3300031903 Ga0307407_10000010 Ga0307407_1000001075 339
244 3300031995 Ga0307409_100035829 Ga0307409_1000358293 339
245 3300032002 Ga0307416_100000014 Ga0307416_100000014157 339
246 3300032004 Ga0307414_10020275 Ga0307414_100202752 339
247 3300038443 Ga0395901_0194316 Ga0395901_0194316_921_1940 339
248 3300039437 Ga0436365_0629267 Ga0436365_0629267_2956_3978 339
249 3300039450 Ga0436363_1237848 Ga0436363_1237848_1302_2324 339
250 3300046471 Ga0495650_0056419 Ga0495650_0056419_422_1441 339
251 3300046507 Ga0495606_0015622 Ga0495606_0015622_1453_2523 339
252 3300046512 Ga0495610_0000152 Ga0495610_0000152_27238_28308 339
253 3300047470 Ga0495681_0023363 Ga0495681_0023363_53_1123 339
254 3300047472 Ga0495686_0002885 Ga0495686_0002885_2297_3316 339
255 3300047472 Ga0495686_0030351 Ga0495686_0030351_1695_2714 339
256 3300049459 Ga0495678_010265 Ga0495678_010265_1610_2629 339
257 3300053080 Ga0500635_0000332 Ga0500635_0000332_1741_2760 339
258 3300005288 Ga0065714_10065834 Ga0065714_100658341 340
259 3300013100 Ga0157373_10043757 Ga0157373_100437571 340
260 3300013102 Ga0157371_10000180 Ga0157371_1000018049 340
261 3300017792 Ga0163161_10168351 Ga0163161_101683512 340
262 3300025913 Ga0207695_10004794 Ga0207695_1000479410 340
263 3300028563 Ga0265319_1021778 Ga0265319_10217783 340
264 3300028794 Ga0307515_10018197 Ga0307515_100181979 340
265 3300031240 Ga0265320_10033716 Ga0265320_100337161 340
266 3300037466 Ga0395898_0020606 Ga0395898_0020606_170_1198 340
267 3300037466 Ga0395898_0396034 Ga0395898_0396034_209_1249 340
268 3300038443 Ga0395901_0399137 Ga0395901_0399137_209_1237 340
269 3300044712 Ga0453684_0025080 Ga0453684_0025080_1190_2212 340
270 3300044712 Ga0453684_0031000 Ga0453684_0031000_5969_6994 340
271 3300045049 Ga0466959_0190078 Ga0466959_0190078_389_1420 340
272 3300046512 Ga0495610_0000113 Ga0495610_0000113_40776_41849 340
273 iso_pu_bacteria 2919186247 2919189579 340
274 iso_pu_bacteria 8055588893 8055589860 340
275 3300009545 Ga0105237_10004250 Ga0105237_1000425011 341
276 3300013104 Ga0157370_10000562 Ga0157370_1000056217 341
277 3300014497 Ga0182008_10000272 Ga0182008_1000027225 341
278 3300014497 Ga0182008_10003116 Ga0182008_1000311611 341
279 3300014497 Ga0182008_10036285 Ga0182008_100362851 341
280 3300014497 Ga0182008_10053923 Ga0182008_100539232 341
281 3300015261 Ga0182006_1000903 Ga0182006_100090316 341
282 3300015262 Ga0182007_10001756 Ga0182007_100017561 341
283 3300015262 Ga0182007_10005603 Ga0182007_100056034 341
284 3300017792 Ga0163161_10000249 Ga0163161_1000024914 341
285 3300047472 Ga0495686_0002723 Ga0495686_0002723_3079_4104 341
286 3300048925 Ga0496122_0000404 Ga0496122_0000404_55093_56118 341
287 3300048926 Ga0496123_0021144 Ga0496123_0021144_2709_3734 341
288 3300003322 rootL2_10276262 rootL2_102762622 342
289 3300005289 Ga0065704_10141826 Ga0065704_101418261 342
290 3300006844 Ga0075428_100003477 Ga0075428_1000034775 342
291 3300006880 Ga0075429_100000334 Ga0075429_10000033424 342
292 3300009094 Ga0111539_10006054 Ga0111539_100060543 342
293 3300027907 Ga0207428_10003328 Ga0207428_1000332814 342
294 3300032004 Ga0307414_10002283 Ga0307414_100022831 342
295 3300049758 Ga0501241_001213 Ga0501241_001213_2703_3731 342
296 3300049776 Ga0501280_006392 Ga0501280_006392_551_1579 342
297 3300050508 nmdc:mga09592_1938_c1 nmdc:mga09592_1938_c1_1402_2436 342
298 3300050510 nmdc:mga06r32_62_c1 nmdc:mga06r32_62_c1_17437_18471 342
299 3300050511 nmdc:mga08y16_4022_c1 nmdc:mga08y16_4022_c1_2965_3999 342
300 iso_pu_bacteria 2738541284 2738760316 342
301 iso_pu_bacteria 2775506987 2776612375 342
302 3300002067 JGI24735J21928_10021537 JGI24735J21928_100215372 343
303 3300031239 Ga0265328_10001579 Ga0265328_100015799 343
304 3300005288 Ga0065714_10007298 Ga0065714_100072982 344
305 3300005614 Ga0068856_100017272 Ga0068856_1000172723 344
306 3300006028 Ga0070717_10025548 Ga0070717_100255484 344
307 3300007788 Ga0099795_10010716 Ga0099795_100107163 344
308 3300025906 Ga0207699_10239978 Ga0207699_102399781 344
309 3300025939 Ga0207665_10049191 Ga0207665_100491912 344
310 3300026078 Ga0207702_10039828 Ga0207702_100398282 344
311 3300031507 Ga0307509_10000224 Ga0307509_1000022425 344
312 2162886007 SwRhRL2b_contig_196423 SwRhRL2b_0503.00001330 346
313 2162886007 SwRhRL2b_contig_3406360 SwRhRL2b_0590.00003530 346
314 3300005288 Ga0065714_10005038 Ga0065714_1000503812 346
315 3300005289 Ga0065704_10000210 Ga0065704_1000021088 346
316 3300013100 Ga0157373_10000276 Ga0157373_100002766 346
317 3300013100 Ga0157373_10001773 Ga0157373_1000177310 346
318 3300013100 Ga0157373_10173358 Ga0157373_101733582 346
319 3300013102 Ga0157371_10000803 Ga0157371_1000080326 346
320 3300013102 Ga0157371_10002864 Ga0157371_100028645 346
321 3300013104 Ga0157370_10004266 Ga0157370_1000426610 346
322 3300014497 Ga0182008_10000006 Ga0182008_10000006242 346
323 3300015261 Ga0182006_1006651 Ga0182006_10066514 346
324 3300017792 Ga0163161_10000085 Ga0163161_1000008528 346
325 3300031911 Ga0307412_10000055 Ga0307412_1000005564 346
326 3300032004 Ga0307414_10002170 Ga0307414_100021701 346
327 3300046538 Ga0495609_0039898 Ga0495609_0039898_506_1546 346
328 3300053093 Ga0500651_0003271 Ga0500651_0003271_6453_7493 346

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01212

Beta_elim_lyase

Beta-eliminating lyase

5

291

0.97

PF00155

Aminotran_1_2

Aminotransferase class I and II

6

334

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1jg8-assembly1.cif.gz_C crystal structure of threonine aldolase (low-specificity) 0.9686 5 338
1jg8-assembly1.cif.gz_A crystal structure of threonine aldolase (low-specificity) 0.9666 5 338
3wgb-assembly1.cif.gz_D crystal structure of aeromonas jandaei l-allo-threonine aldolase 0.9652 5 338
3wgc-assembly1.cif.gz_A aeromonas jandaei l-allo-threonine aldolase h128y/s292r double mutant 0.9603 4 338
3wgb-assembly1.cif.gz_A crystal structure of aeromonas jandaei l-allo-threonine aldolase 0.9586 5 338
ID Description Score Start End Superfamily
1jg8A01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9814 5 247 3.40.640.10
af_A0A1D6EP40_204_303_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9668 149 247 3.40.640.10
1jg8A01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9657 5 247 3.40.640.10
af_Q59NC4_13_259_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9582 7 248 3.40.640.10
af_A0A1D6EP40_204_303_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9482 149 247 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A4Q5YXN9-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9936 5 266 GO:0005829
GO:0006545
GO:0006567
GO:0008483
GO:0008732
AF-A0A4Q3SL64-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9931 5 200 GO:0005829
GO:0006545
GO:0006567
GO:0008483
GO:0008732
AF-A0A561P301-F1-model_v4 L-threonine aldolase 0.991 5 341 GO:0005829
GO:0006545
GO:0006567
GO:0008732
AF-A0A0U4CAE0-F1-model_v4 Threonine aldolase 0.991 20 337 GO:0005829
GO:0006545
GO:0006567
GO:0008732
AF-A0A0E9N260-F1-model_v4 L-threonine aldolase 0.9906 3 340 GO:0005829
GO:0006545
GO:0006567
GO:0008732

Feature Viewer

pLDDT pTM Quality
95.86 0.92 High
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Predicted Structure (AlphaFold2)

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