F408877

General Info

Members Datasets Scaffolds Average Seq Length
327 207 652 524

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0258264|Ga0436364_0258264_4184_5989
Length 601
Sequence VLAVLPGKIQSRRVSDVCRARHAASAPEAAIIGESPQRRNGRTARRLTAHRLRVSVPIVARETVRLIFRQKKGSRAGMGRRVWLALTVIALALAPVRGWAETTLRFIPQADLRSLDPIWTTAYITRNFGYMVYDTLFALDKNFKPQPQMVDTFTISDDKLTYKFTLRDGLKWHDGSPVRAADCVASLKRWGARDALGQKMMQSIASMTADNDKTFTITLKSPFPLMLDALAKLSNVTPFMMPERLANTDPFTQITEEDGSGPFKFVKAEWVPGSKAVFVKDTAYVPRKEPPSFAAGGKIAKVDRVEWIYIPDTATAAAALNAGEADWYEQPPADLIPTFASNKDIKVDTVDPLGNYGVLRFNSTLPPFNNPKMREAVLNLIDQKEYMQAVAGDEKYWKTCAALFVCGTPYASDAGADALLHGPNVDKAKGLIKEAGYKGEKIVLLSATDQSIVQNQALVTQELLTNAGLNVDLQASDWGTLITRRTSKEPIDKGGWSIFHTWTSAPDMLSPAVNNQVRGNGDKAWFGWPSDAKMEDLVDAWFKAPDLAAQKKIADDIQTEYYANEIPGASTGQFVIPTAYRKNLDGIIVAPVVFLWNVEKK

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
39 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013875 Rhizosphere microbial communities from switchgrass unharvested rhizosphere in Austin, TX, USA - RS_233 Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
97 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
98 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
99 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
100 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
107 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
112 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
113 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
116 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
117 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
118 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
119 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
122 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
123 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
124 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
125 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
126 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
127 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
128 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
129 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
130 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
135 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
136 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
158 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
159 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
160 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
161 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
162 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
167 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
170 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
171 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
172 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
173 3300053097 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 endosphere Metagenome Endosphere
174 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
175 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
178 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
179 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
180 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
181 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
182 2512875024
183 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
184 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
185 2643221558 Rhizobium sp. Root149 Isolate Unclassified
186 2818991467 Bosea vestrisii 3192 Isolate Unclassified
187 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
188 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
189 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
190 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
191 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
192 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
193 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
194 2902330777 Methylobacterium sp. 2A Isolate Unclassified
195 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
196 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
197 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
198 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
199 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
200 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
201 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
202 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
203 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
204 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
205 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
206 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
207 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.99
Metatranscriptomes 0
Isolates 11.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.02
Nodule 3.36
Rhizoplane 1.83
Rhizosphere 57.8
Stem 0
Stem Tuber 0
Unclassified 1.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0258264 3300037853 Bacteria 9506
2 JGI25151J46595_10000067 3300003187 Bacteria 142586
3 JGI25406J46586_10003500 3300003203 Bacteria 7375
4 JGI25404J52841_10009119 3300003659 Bacteria 2121
5 Ga0055526_1000291 3300003771 Bacteria 41931
6 Ga0055526_1000509 3300003771 Bacteria 30962
7 Ga0055524_1000068 3300003775 Bacteria 130413
8 Ga0055524_1011546 3300003775 Bacteria 3450
9 Ga0070683_100152066 3300005329 Bacteria 2194
10 Ga0070680_100012146 3300005336 Bacteria 6688
11 Ga0070671_100058467 3300005355 Bacteria 3209
12 Ga0070709_10034434 3300005434 Unclassified 3070
13 Ga0070709_10056592 3300005434 Bacteria 2480
14 Ga0070714_100032781 3300005435 Bacteria 4338
15 Ga0070714_100153174 3300005435 Bacteria 2079
16 Ga0070713_100003134 3300005436 Bacteria 10884
17 Ga0070713_100013338 3300005436 Bacteria 6066
18 Ga0070713_100019351 3300005436 Bacteria 5195
19 Ga0070713_100025633 3300005436 Bacteria 4613
20 Ga0070710_10024338 3300005437 Unclassified 3193
21 Ga0070708_100148140 3300005445 Bacteria 2181
22 Ga0070678_100020497 3300005456 Bacteria 4339
23 Ga0070678_100169989 3300005456 Bacteria 1774
24 Ga0070681_10001016 3300005458 Bacteria 23746
25 Ga0070707_100010366 3300005468 Bacteria 8678
26 Ga0070707_100136966 3300005468 Bacteria 2382
27 Ga0070698_100016843 3300005471 Bacteria 7708
28 Ga0070698_100022361 3300005471 Bacteria 6615
29 Ga0070698_100106756 3300005471 Bacteria 2768
30 Ga0070679_100015340 3300005530 Bacteria 7363
31 Ga0070684_100006439 3300005535 Bacteria 9085
32 Ga0070684_100017650 3300005535 Bacteria 5863
33 Ga0070697_100032469 3300005536 Bacteria 4202
34 Ga0070665_100019255 3300005548 Bacteria 6847
35 Ga0070665_100020294 3300005548 Bacteria 6672
36 Ga0070665_100108124 3300005548 Bacteria 2783
37 Ga0068855_100014797 3300005563 Bacteria 9395
38 Ga0070664_100032626 3300005564 Bacteria 4356
39 Ga0068857_100127507 3300005577 Bacteria 2293
40 Ga0068856_100085113 3300005614 Bacteria 3141
41 Ga0068856_100191496 3300005614 Bacteria 2059
42 Ga0068852_100008662 3300005616 Bacteria 7517
43 Ga0068852_100027645 3300005616 Bacteria 4626
44 Ga0068852_100092227 3300005616 Bacteria 2712
45 Ga0068863_100113946 3300005841 Bacteria 2576
46 Ga0081455_10003931 3300005937 Bacteria 16896
47 Ga0081538_10015843 3300005981 Bacteria 5813
48 Ga0081540_1000090 3300005983 Bacteria 95488
49 Ga0081539_10000115 3300005985 Bacteria 188623
50 Ga0081539_10001324 3300005985 Bacteria 43245
51 Ga0081539_10005437 3300005985 Bacteria 13000
52 Ga0081539_10013367 3300005985 Bacteria 6190
53 Ga0070717_10021792 3300006028 Bacteria 5054
54 Ga0075365_10015078 3300006038 Bacteria 4666
55 Ga0075365_10016453 3300006038 Bacteria 4499
56 Ga0075365_10086684 3300006038 Bacteria 2128
57 Ga0075363_100090545 3300006048 Bacteria 1683
58 Ga0070712_100024312 3300006175 Bacteria 4013
59 Ga0070712_100035778 3300006175 Bacteria 3373
60 Ga0075362_10002638 3300006177 Bacteria 6081
61 Ga0075362_10004335 3300006177 Bacteria 5082
62 Ga0075362_10006078 3300006177 Bacteria 4471
63 Ga0075362_10007029 3300006177 Bacteria 4229
64 Ga0075362_10008139 3300006177 Bacteria 4001
65 Ga0075362_10030161 3300006177 Bacteria 2341
66 Ga0075362_10040893 3300006177 Bacteria 2042
67 Ga0075367_10004967 3300006178 Bacteria 6559
68 Ga0075367_10015143 3300006178 Bacteria 4186
69 Ga0075367_10029065 3300006178 Bacteria 3159
70 Ga0075367_10034250 3300006178 Bacteria 2933
71 Ga0075367_10048998 3300006178 Bacteria 2490
72 Ga0075369_10000193 3300006186 Bacteria 17587
73 Ga0075369_10000271 3300006186 Bacteria 15445
74 Ga0075369_10000783 3300006186 Bacteria 10405
75 Ga0075369_10004055 3300006186 Bacteria 5382
76 Ga0075369_10005267 3300006186 Bacteria 4823
77 Ga0075369_10011378 3300006186 Bacteria 3501
78 Ga0075369_10019344 3300006186 Bacteria 2780
79 Ga0075366_10009479 3300006195 Bacteria 5434
80 Ga0075366_10052806 3300006195 Bacteria 2414
81 Ga0075428_100030858 3300006844 Bacteria 5926
82 Ga0075436_100017146 3300006914 Bacteria 4956
83 Ga0105240_10057666 3300009093 Bacteria 4850
84 Ga0105240_10182564 3300009093 Bacteria 2475
85 Ga0111539_10066656 3300009094 Bacteria 4252
86 Ga0111539_10419314 3300009094 Unclassified 1559
87 Ga0114129_10021265 3300009147 Bacteria 9212
88 Ga0105241_10191173 3300009174 Bacteria 1704
89 Ga0105237_10031488 3300009545 Bacteria 5378
90 Ga0105238_10045954 3300009551 Bacteria 4409
91 Ga0105249_10044538 3300009553 Bacteria 4035
92 Ga0105035_100330 3300009988 Bacteria 2925
93 Ga0157371_10026562 3300013102 Bacteria 4207
94 Ga0157371_10067260 3300013102 Bacteria 2536
95 Ga0157369_10093874 3300013105 Bacteria 3203
96 Ga0171462_1006 3300013250 Bacteria 432986
97 Ga0157374_10088534 3300013296 Bacteria 2949
98 Ga0157515_112096 3300013875 Bacteria 2142
99 Ga0163163_10077017 3300014325 Bacteria 3331
100 Ga0182008_10000171 3300014497 Bacteria 50744
101 Ga0182008_10005811 3300014497 Bacteria 6975
102 Ga0157376_10121807 3300014969 Bacteria 2313
103 Ga0213872_10034711 3300021361 Bacteria 2308
104 Ga0213876_10002990 3300021384 Bacteria 9793
105 Ga0213875_10000134 3300021388 Bacteria 82367
106 Ga0213875_10004583 3300021388 Bacteria 7541
107 Ga0209675_1000819 3300025291 Bacteria 20482
108 Ga0209025_1000008 3300025294 Bacteria 1130876
109 Ga0209564_1000041 3300025295 Bacteria 405199
110 Ga0209564_1000065 3300025295 Bacteria 315205
111 Ga0209256_1000014 3300025299 Bacteria 687409
112 Ga0209256_1000266 3300025299 Bacteria 92357
113 Ga0207426_1028056 3300025302 Bacteria 1869
114 Ga0207692_10058103 3300025898 Bacteria 1991
115 Ga0207685_10013677 3300025905 Bacteria 2518
116 Ga0207699_10007606 3300025906 Bacteria 5305
117 Ga0207699_10121440 3300025906 Bacteria 1690
118 Ga0207705_10014714 3300025909 Bacteria 5626
119 Ga0207684_10007394 3300025910 Bacteria 9894
120 Ga0207684_10113503 3300025910 Bacteria 2319
121 Ga0207707_10003968 3300025912 Bacteria 13137
122 Ga0207695_10123623 3300025913 Bacteria 2553
123 Ga0207671_10047449 3300025914 Bacteria 3179
124 Ga0207693_10015205 3300025915 Bacteria 6177
125 Ga0207693_10027884 3300025915 Unclassified 4464
126 Ga0207693_10046256 3300025915 Bacteria 3418
127 Ga0207693_10065431 3300025915 Bacteria 2847
128 Ga0207657_10031639 3300025919 Bacteria 4789
129 Ga0207649_10012308 3300025920 Bacteria 4742
130 Ga0207652_10004940 3300025921 Bacteria 10794
131 Ga0207646_10002924 3300025922 Bacteria 19806
132 Ga0207681_10132441 3300025923 Bacteria 1845
133 Ga0207700_10009154 3300025928 Bacteria 6169
134 Ga0207700_10020423 3300025928 Bacteria 4499
135 Ga0207700_10032953 3300025928 Bacteria 3702
136 Ga0207700_10070550 3300025928 Unclassified 2686
137 Ga0207700_10155493 3300025928 Bacteria 1894
138 Ga0207664_10026991 3300025929 Bacteria 4348
139 Ga0207664_10113516 3300025929 Bacteria 2256
140 Ga0207665_10022536 3300025939 Bacteria 4144
141 Ga0207691_10037256 3300025940 Bacteria 4505
142 Ga0207661_10021664 3300025944 Bacteria 4819
143 Ga0207679_10030957 3300025945 Bacteria 3741
144 Ga0207667_10042654 3300025949 Bacteria 4821
145 Ga0207667_10102127 3300025949 Bacteria 2958
146 Ga0207702_10025382 3300026078 Bacteria 4918
147 Ga0207683_10023621 3300026121 Bacteria 5289
148 Ga0207683_10049804 3300026121 Bacteria 3668
149 Ga0207683_10062105 3300026121 Bacteria 3290
150 Ga0268266_10022725 3300028379 Bacteria 5339
151 Ga0268266_10043132 3300028379 Bacteria 3854
152 Ga0268266_10062585 3300028379 Bacteria 3212
153 Ga0265334_10041930 3300028573 Bacteria 1786
154 Ga0265338_10045406 3300028800 Bacteria 4040
155 Ga0265338_10076109 3300028800 Bacteria 2844
156 Ga0307511_10048943 3300030521 Bacteria 3430
157 Ga0265327_10002248 3300031251 Bacteria 20917
158 Ga0307509_10043839 3300031507 Bacteria 4836
159 Ga0307516_10028294 3300031730 Bacteria 5673
160 Ga0307507_10052499 3300033179 Bacteria 3906
161 Ga0373958_0003184 3300034819 Bacteria 2354
162 Ga0373926_0032924 3300035083 Bacteria 1830
163 Ga0316574_0001849 3300035398 Bacteria 10316
164 Ga0373931_0000851 3300035691 Bacteria 12851
165 Ga0373935_0003393 3300035692 Bacteria 9254
166 Ga0373927_0024224 3300035695 Bacteria 3970
167 Ga0373933_0031112 3300035724 Bacteria 3095
168 Ga0373937_0016820 3300036401 Bacteria 6502
169 Ga0373937_0043578 3300036401 Bacteria 4097
170 Ga0373937_0066082 3300036401 Bacteria 3330
171 Ga0373937_0073619 3300036401 Bacteria 3152
172 Ga0316584_0048537 3300036712 Bacteria 3172
173 Ga0395899_0008568 3300037312 Bacteria 7876
174 Ga0395899_0031847 3300037312 Bacteria 3962
175 Ga0395899_0041619 3300037312 Bacteria 3432
176 Ga0395900_0005132 3300037418 Bacteria 13755
177 Ga0395900_0019423 3300037418 Bacteria 6928
178 Ga0395900_0019735 3300037418 Bacteria 6870
179 Ga0395900_0064489 3300037418 Bacteria 3764
180 Ga0395900_0088612 3300037418 Bacteria 3181
181 Ga0395898_0008870 3300037466 Bacteria 10594
182 Ga0395898_0040461 3300037466 Bacteria 4609
183 Ga0436364_1048008 3300037853 Bacteria 1587
184 Ga0436364_1320883 3300037853 Bacteria 111220
185 Ga0436364_1461267 3300037853 Bacteria 1837
186 Ga0436364_1542030 3300037853 Bacteria 2067
187 Ga0395901_0003531 3300038443 Bacteria 15755
188 Ga0395901_0014026 3300038443 Bacteria 8154
189 Ga0395901_0022496 3300038443 Bacteria 6462
190 Ga0395901_0175276 3300038443 Bacteria 2249
191 Ga0400483_126321 3300039062 Bacteria 3817
192 Ga0400483_270381 3300039062 Bacteria 1941
193 Ga0400483_285772 3300039062 Bacteria 1826
194 Ga0436365_0314000 3300039437 Bacteria 16307
195 Ga0436365_0799904 3300039437 Bacteria 37639
196 Ga0436360_0300993 3300039438 Bacteria 2284
197 Ga0436360_0891231 3300039438 Bacteria 11474
198 Ga0436361_0852309 3300039447 Bacteria 2449
199 Ga0436363_0267480 3300039450 Bacteria 2430
200 Ga0436362_1104206 3300039453 Bacteria 2122
201 Ga0439448_0023778 3300042005 Bacteria 1914
202 Ga0466965_0109647 3300044683 Bacteria 1418
203 Ga0466963_0008440 3300044694 Bacteria 6172
204 Ga0466963_0029918 3300044694 Bacteria 3509
205 Ga0466967_0036243 3300045976 Bacteria 4208
206 Ga0466967_0044821 3300045976 Bacteria 3839
207 Ga0466967_0157240 3300045976 Bacteria 2130
208 Ga0495592_0045372 3300046454 Bacteria 3280
209 Ga0495629_0018304 3300046459 Bacteria 5015
210 Ga0495650_0044301 3300046471 Bacteria 1882
211 Ga0495580_0122437 3300046472 Bacteria 1806
212 Ga0495608_0040138 3300046511 Bacteria 3136
213 Ga0495652_0010463 3300046529 Bacteria 8406
214 Ga0495640_0027362 3300046533 Bacteria 4113
215 Ga0495640_0146180 3300046533 Bacteria 1521
216 Ga0495587_0026667 3300046536 Bacteria 3522
217 Ga0495622_0007579 3300046557 Bacteria 5041
218 Ga0495667_0036396 3300046559 Bacteria 3286
219 Ga0495658_0073629 3300046683 Bacteria 1989
220 Ga0495600_0058525 3300046809 Bacteria 2517
221 Ga0495604_0043243 3300047317 Bacteria 3528
222 Ga0495674_0006655 3300047319 Bacteria 11075
223 Ga0495680_0007643 3300047322 Bacteria 9870
224 Ga0495602_0020574 3300048088 Bacteria 6518
225 Ga0496104_0086702 3300048907 Bacteria 2989
226 Ga0496105_0113146 3300048908 Bacteria 2240
227 Ga0496109_0007894 3300048912 Bacteria 9020
228 Ga0496110_0049573 3300048913 Bacteria 3684
229 Ga0496112_0009716 3300048915 Bacteria 8684
230 Ga0496113_0049402 3300048916 Bacteria 3132
231 Ga0496117_0003382 3300048920 Bacteria 18582
232 Ga0496117_0020568 3300048920 Bacteria 5375
233 Ga0496117_0061788 3300048920 Bacteria 2572
234 Ga0496118_0001355 3300048921 Bacteria 36910
235 Ga0496119_0031646 3300048922 Bacteria 3541
236 Ga0496119_0041713 3300048922 Bacteria 2918
237 Ga0496121_0000453 3300048924 Bacteria 80749
238 Ga0496123_0016752 3300048926 Bacteria 5930
239 Ga0496124_0000750 3300048927 Bacteria 53262
240 Ga0496125_0101699 3300048928 Bacteria 2114
241 Ga0496126_0012279 3300048929 Bacteria 8790
242 Ga0501033_0000924 3300049570 Bacteria 26818
243 Ga0501034_0001004 3300049571 Bacteria 40433
244 Ga0501034_0043992 3300049571 Bacteria 4516
245 Ga0501037_0032685 3300049573 Bacteria 3843
246 Ga0501047_0124420 3300049581 Bacteria 2459
247 Ga0501068_0010782 3300049584 Bacteria 5140
248 Ga0501035_0000157 3300049822 Bacteria 83835
249 nmdc:mga03683_10261_c1 3300050489 Bacteria 3356
250 nmdc:mga03683_1342_c1 3300050489 Bacteria 7293
251 nmdc:mga03683_1439_c1 3300050489 Bacteria 7102
252 nmdc:mga03683_29859_c1 3300050489 Bacteria 2177
253 nmdc:mga03683_79073_c1 3300050489 Bacteria 1417
254 nmdc:mga03683_7995_c1 3300050489 Bacteria 3698
255 nmdc:mga03n38_63897_c1 3300050490 Bacteria 1683
256 nmdc:mga0yw44_4308_c2 3300050492 Bacteria 3536
257 nmdc:mga0yw44_54014_c1 3300050492 Bacteria 2440
258 nmdc:mga0k408_21844_c1 3300050493 Bacteria 2425
259 nmdc:mga0k408_6616_c1 3300050493 Bacteria 5861
260 nmdc:mga06z11_14636_c1 3300050494 Bacteria 3481
261 nmdc:mga06z11_21832_c1 3300050494 Bacteria 2980
262 nmdc:mga06z11_7680_c1 3300050494 Bacteria 4452
263 nmdc:mga07m45_14343_c1 3300050496 Bacteria 4219
264 nmdc:mga07m45_51204_c1 3300050496 Bacteria 2328
265 nmdc:mga07m45_67999_c1 3300050496 Bacteria 2025
266 nmdc:mga05p37_114000_c1 3300050507 Bacteria 3323
267 nmdc:mga09592_2198_c1 3300050508 Bacteria 15705
268 nmdc:mga06r32_10996_c1 3300050510 Bacteria 8147
269 nmdc:mga0rr50_153802_c1 3300050513 Bacteria 1861
270 nmdc:mga0sz30_1288_c1 3300050516 Bacteria 8931
271 nmdc:mga0sz30_155_c2 3300050516 Bacteria 13523
272 nmdc:mga0sz30_655_c1 3300050516 Bacteria 12822
273 nmdc:mga0sz30_818_c1 3300050516 Bacteria 11225
274 Ga0495601_0001423 3300053077 Bacteria 13177
275 Ga0495612_0001867 3300053078 Bacteria 8662
276 Ga0495619_0010620 3300053085 Bacteria 5793
277 Ga0495619_0195116 3300053085 Bacteria 1402
278 Ga0500647_0043348 3300053091 Bacteria 2160
279 Ga0500651_0043807 3300053093 Bacteria 2818
280 Ga0500648_057126 3300053097 Bacteria 2213
281 Ga0500568_0014437 3300053139 Bacteria 3567
282 Ga0500573_0077102 3300053140 Bacteria 1896
283 Ga0500616_0001583 3300053153 Bacteria 21251
284 Ga0500616_0001687 3300053153 Bacteria 20336
285 Ga0500622_0016225 3300053156 Bacteria 3981
286 Ga0500636_0014543 3300053177 Bacteria 4628
287 Ga0500636_0027204 3300053177 Bacteria 3377
288 Ga0500636_0058120 3300053177 Bacteria 2261
289 Ga0500609_004312 3300053731 Bacteria 1972
290 Ga0500552_000101 3300053733 Bacteria 7105
291 2512934885 2512875016 Bacteria 6529530
292 2512963246 2512875024 Bacteria 7195110
293 2514034462 2513237164 Bacteria 7563725
294 2596375080 2595698237 Bacteria 6712432
295 2643814702 2643221558 Bacteria 5460675
296 2819719376 2818991467 Bacteria 5893227
297 2842775876 2842775625 Bacteria 5587290
298 2842777149 2842775625 Bacteria 5587290
299 2842777616 2842775625 Bacteria 5587290
300 2842778871 2842775625 Bacteria 5587290
301 2842780280 2842775625 Bacteria 5587290
302 2874128631 2874123672 Bacteria 7238285
303 2881668011 2881665667 Bacteria 8175609
304 2885305524 2885305155 Bacteria 7348390
305 2885315065 2885312484 Bacteria 6415165
306 2891049001 2891048133 Bacteria 4447501
307 2894776061 2894772417 Bacteria 5305674
308 2894776065 2894772417 Bacteria 5305674
309 2902335426 2902330777 Bacteria 6395352
310 2902409516 2902405164 Bacteria 6784948
311 2917704595 2917699015 Bacteria 7043791
312 2919683294 2919679072 Bacteria 4629602
313 2928126428 2928125067 Bacteria 5937560
314 2929202543 2929199973 Bacteria 7260745
315 2929205020 2929199973 Bacteria 7260745
316 2929205590 2929199973 Bacteria 7260745
317 2935640300 2935638405 Bacteria 10015038
318 2935666862 2935665750 Bacteria 9571747
319 2935808149 2935801545 Bacteria 9301974
320 2935829783 2935827899 Bacteria 10038562
321 2963650731 2963644680 Bacteria 6530403
322 8018151191 8018150411 Bacteria 5549903
323 8055432697 8055431914 Bacteria 4551896
324 8055913051 8055909800 Bacteria 7278581
325 8055915049 8055909800 Bacteria 7278581
326 8055915800 8055909800 Bacteria 7278581
327 Ga0436364_0258264
328 JGI25151J46595_10000067
329 JGI25406J46586_10003500
330 JGI25404J52841_10009119
331 Ga0055526_1000291
332 Ga0055526_1000509
333 Ga0055524_1000068
334 Ga0055524_1011546
335 Ga0070683_100152066
336 Ga0070680_100012146
337 Ga0070671_100058467
338 Ga0070709_10034434
339 Ga0070709_10056592
340 Ga0070714_100032781
341 Ga0070714_100153174
342 Ga0070713_100003134
343 Ga0070713_100013338
344 Ga0070713_100019351
345 Ga0070713_100025633
346 Ga0070710_10024338
347 Ga0070708_100148140
348 Ga0070678_100020497
349 Ga0070678_100169989
350 Ga0070681_10001016
351 Ga0070707_100010366
352 Ga0070707_100136966
353 Ga0070698_100016843
354 Ga0070698_100022361
355 Ga0070698_100106756
356 Ga0070679_100015340
357 Ga0070684_100006439
358 Ga0070684_100017650
359 Ga0070697_100032469
360 Ga0070665_100019255
361 Ga0070665_100020294
362 Ga0070665_100108124
363 Ga0068855_100014797
364 Ga0070664_100032626
365 Ga0068857_100127507
366 Ga0068856_100085113
367 Ga0068856_100191496
368 Ga0068852_100008662
369 Ga0068852_100027645
370 Ga0068852_100092227
371 Ga0068863_100113946
372 Ga0081455_10003931
373 Ga0081538_10015843
374 Ga0081540_1000090
375 Ga0081539_10000115
376 Ga0081539_10001324
377 Ga0081539_10005437
378 Ga0081539_10013367
379 Ga0070717_10021792
380 Ga0075365_10015078
381 Ga0075365_10016453
382 Ga0075365_10086684
383 Ga0075363_100090545
384 Ga0070712_100024312
385 Ga0070712_100035778
386 Ga0075362_10002638
387 Ga0075362_10004335
388 Ga0075362_10006078
389 Ga0075362_10007029
390 Ga0075362_10008139
391 Ga0075362_10030161
392 Ga0075362_10040893
393 Ga0075367_10004967
394 Ga0075367_10015143
395 Ga0075367_10029065
396 Ga0075367_10034250
397 Ga0075367_10048998
398 Ga0075369_10000193
399 Ga0075369_10000271
400 Ga0075369_10000783
401 Ga0075369_10004055
402 Ga0075369_10005267
403 Ga0075369_10011378
404 Ga0075369_10019344
405 Ga0075366_10009479
406 Ga0075366_10052806
407 Ga0075428_100030858
408 Ga0075436_100017146
409 Ga0105240_10057666
410 Ga0105240_10182564
411 Ga0111539_10066656
412 Ga0111539_10419314
413 Ga0114129_10021265
414 Ga0105241_10191173
415 Ga0105237_10031488
416 Ga0105238_10045954
417 Ga0105249_10044538
418 Ga0105035_100330
419 Ga0157371_10026562
420 Ga0157371_10067260
421 Ga0157369_10093874
422 Ga0171462_1006
423 Ga0157374_10088534
424 Ga0157515_112096
425 Ga0163163_10077017
426 Ga0182008_10000171
427 Ga0182008_10005811
428 Ga0157376_10121807
429 Ga0213872_10034711
430 Ga0213876_10002990
431 Ga0213875_10000134
432 Ga0213875_10004583
433 Ga0209675_1000819
434 Ga0209025_1000008
435 Ga0209564_1000041
436 Ga0209564_1000065
437 Ga0209256_1000014
438 Ga0209256_1000266
439 Ga0207426_1028056
440 Ga0207692_10058103
441 Ga0207685_10013677
442 Ga0207699_10007606
443 Ga0207699_10121440
444 Ga0207705_10014714
445 Ga0207684_10007394
446 Ga0207684_10113503
447 Ga0207707_10003968
448 Ga0207695_10123623
449 Ga0207671_10047449
450 Ga0207693_10015205
451 Ga0207693_10027884
452 Ga0207693_10046256
453 Ga0207693_10065431
454 Ga0207657_10031639
455 Ga0207649_10012308
456 Ga0207652_10004940
457 Ga0207646_10002924
458 Ga0207681_10132441
459 Ga0207700_10009154
460 Ga0207700_10020423
461 Ga0207700_10032953
462 Ga0207700_10070550
463 Ga0207700_10155493
464 Ga0207664_10026991
465 Ga0207664_10113516
466 Ga0207665_10022536
467 Ga0207691_10037256
468 Ga0207661_10021664
469 Ga0207679_10030957
470 Ga0207667_10042654
471 Ga0207667_10102127
472 Ga0207702_10025382
473 Ga0207683_10023621
474 Ga0207683_10049804
475 Ga0207683_10062105
476 Ga0268266_10022725
477 Ga0268266_10043132
478 Ga0268266_10062585
479 Ga0265334_10041930
480 Ga0265338_10045406
481 Ga0265338_10076109
482 Ga0307511_10048943
483 Ga0265327_10002248
484 Ga0307509_10043839
485 Ga0307516_10028294
486 Ga0307507_10052499
487 Ga0373958_0003184
488 Ga0373926_0032924
489 Ga0316574_0001849
490 Ga0373931_0000851
491 Ga0373935_0003393
492 Ga0373927_0024224
493 Ga0373933_0031112
494 Ga0373937_0016820
495 Ga0373937_0043578
496 Ga0373937_0066082
497 Ga0373937_0073619
498 Ga0316584_0048537
499 Ga0395899_0008568
500 Ga0395899_0031847
501 Ga0395899_0041619
502 Ga0395900_0005132
503 Ga0395900_0019423
504 Ga0395900_0019735
505 Ga0395900_0064489
506 Ga0395900_0088612
507 Ga0395898_0008870
508 Ga0395898_0040461
509 Ga0436364_1048008
510 Ga0436364_1320883
511 Ga0436364_1461267
512 Ga0436364_1542030
513 Ga0395901_0003531
514 Ga0395901_0014026
515 Ga0395901_0022496
516 Ga0395901_0175276
517 Ga0400483_126321
518 Ga0400483_270381
519 Ga0400483_285772
520 Ga0436365_0314000
521 Ga0436365_0799904
522 Ga0436360_0300993
523 Ga0436360_0891231
524 Ga0436361_0852309
525 Ga0436363_0267480
526 Ga0436362_1104206
527 Ga0439448_0023778
528 Ga0466965_0109647
529 Ga0466963_0008440
530 Ga0466963_0029918
531 Ga0466967_0036243
532 Ga0466967_0044821
533 Ga0466967_0157240
534 Ga0495592_0045372
535 Ga0495629_0018304
536 Ga0495650_0044301
537 Ga0495580_0122437
538 Ga0495608_0040138
539 Ga0495652_0010463
540 Ga0495640_0027362
541 Ga0495640_0146180
542 Ga0495587_0026667
543 Ga0495622_0007579
544 Ga0495667_0036396
545 Ga0495658_0073629
546 Ga0495600_0058525
547 Ga0495604_0043243
548 Ga0495674_0006655
549 Ga0495680_0007643
550 Ga0495602_0020574
551 Ga0496104_0086702
552 Ga0496105_0113146
553 Ga0496109_0007894
554 Ga0496110_0049573
555 Ga0496112_0009716
556 Ga0496113_0049402
557 Ga0496117_0003382
558 Ga0496117_0020568
559 Ga0496117_0061788
560 Ga0496118_0001355
561 Ga0496119_0031646
562 Ga0496119_0041713
563 Ga0496121_0000453
564 Ga0496123_0016752
565 Ga0496124_0000750
566 Ga0496125_0101699
567 Ga0496126_0012279
568 Ga0501033_0000924
569 Ga0501034_0001004
570 Ga0501034_0043992
571 Ga0501037_0032685
572 Ga0501047_0124420
573 Ga0501068_0010782
574 Ga0501035_0000157
575 nmdc:mga03683_10261_c1
576 nmdc:mga03683_1342_c1
577 nmdc:mga03683_1439_c1
578 nmdc:mga03683_29859_c1
579 nmdc:mga03683_79073_c1
580 nmdc:mga03683_7995_c1
581 nmdc:mga03n38_63897_c1
582 nmdc:mga0yw44_4308_c2
583 nmdc:mga0yw44_54014_c1
584 nmdc:mga0k408_21844_c1
585 nmdc:mga0k408_6616_c1
586 nmdc:mga06z11_14636_c1
587 nmdc:mga06z11_21832_c1
588 nmdc:mga06z11_7680_c1
589 nmdc:mga07m45_14343_c1
590 nmdc:mga07m45_51204_c1
591 nmdc:mga07m45_67999_c1
592 nmdc:mga05p37_114000_c1
593 nmdc:mga09592_2198_c1
594 nmdc:mga06r32_10996_c1
595 nmdc:mga0rr50_153802_c1
596 nmdc:mga0sz30_1288_c1
597 nmdc:mga0sz30_155_c2
598 nmdc:mga0sz30_655_c1
599 nmdc:mga0sz30_818_c1
600 Ga0495601_0001423
601 Ga0495612_0001867
602 Ga0495619_0010620
603 Ga0495619_0195116
604 Ga0500647_0043348
605 Ga0500651_0043807
606 Ga0500648_057126
607 Ga0500568_0014437
608 Ga0500573_0077102
609 Ga0500616_0001583
610 Ga0500616_0001687
611 Ga0500622_0016225
612 Ga0500636_0014543
613 Ga0500636_0027204
614 Ga0500636_0058120
615 Ga0500609_004312
616 Ga0500552_000101
617 2512934885
618 2512963246
619 2514034462
620 2596375080
621 2643814702
622 2819719376
623 2842775876
624 2842777149
625 2842777616
626 2842778871
627 2842780280
628 2874128631
629 2881668011
630 2885305524
631 2885315065
632 2891049001
633 2894776061
634 2894776065
635 2902335426
636 2902409516
637 2917704595
638 2919683294
639 2928126428
640 2929202543
641 2929205020
642 2929205590
643 2935640300
644 2935666862
645 2935808149
646 2935829783
647 2963650731
648 8018151191
649 8055432697
650 8055913051
651 8055915049
652 8055915800

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00496

SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

144

525

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hlx-assembly1.cif.gz_A structure of the pbp agaa in complex with agropinic acid from a.tumefacien r10 0.8284 32 514
6ofq-assembly1.cif.gz_A abc transporter-associated periplasmic binding protein dppa from helicobacter pylori in complex with peptide stsa 0.8272 32 514
4oeu-assembly2.cif.gz_B crystal structure of nikz from campylobacter jejuni in complex with ni(l-his) 0.8191 32 512
3m8u-assembly1.cif.gz_A crystal structure of glutathione-binding protein a (gbpa) from haemophilus parasuis sh0165 in complex with glutathione disulfide (gssg) 0.8179 32 514
6hlx-assembly1.cif.gz_A structure of the pbp agaa in complex with agropinic acid from a.tumefacien r10 0.8143 32 514
ID Description Score Start End Superfamily
4oeuB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.906 191 279 3.40.190.10
4qflB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.89 191 278 3.40.190.10
5f1qB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8869 191 278 3.40.190.10
af_P46890_114_304_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8698 28 242 3.40.190.10
5dmxC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8659 367 403 3.40.50.20
ID Description Score Start End GO Terms
AF-A0A521QUM1-F1-model_v4 ABC transporter substrate-binding protein 0.97 38 514 GO:0015833
GO:0030288
GO:0043190
GO:1904680
AF-A0A2S6MHN2-F1-model_v4 ABC transporter substrate-binding protein 0.9475 50 512 GO:0015833
GO:0030288
GO:0043190
GO:1904680
AF-A0A521QUM1-F1-model_v4 ABC transporter substrate-binding protein 0.9355 38 514 GO:0015833
GO:0030288
GO:0043190
GO:1904680
AF-A0A536UXJ9-F1-model_v4 ABC transporter substrate-binding protein 0.9331 220 514 GO:0015833
GO:1904680
AF-A0A543N2C9-F1-model_v4 deleted 0.9283 1 513

Map