F408772

General Info

Members Datasets Scaffolds Average Seq Length
327 229 654 252

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10248237|Ga0105239_102482372
Length 295
Sequence MQWALGATHSPSFDFLLPETDNEPLPAHQLAVPVFRMERQGSLMIMYLRRLTGKERSERTDRHLARFLTFVAGAANAGGFLAVQQYTSHMSGIVSSMADHLALGNVELALSGLGALSSFVAGAACSAVLVNWGRRQSLQGEYAFPLVLEAILLICFGLLGSHLARHEALFVPMTVMLLCFIMGLQNAIITKLSEARIRTTHVTGLVTDMGIELGKLLYWNISGDDSDRLFVKADRRKLRLLASLVALFFIGGVSGALGFKQVGFSATLFLAAILLVLASMPVLEDISVRMRRLWQ

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
5 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
6 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
7 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
8 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
14 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
15 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
16 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
17 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
18 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
22 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
23 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
36 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
56 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
57 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
58 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
59 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
62 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
64 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
65 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
66 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
89 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
90 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
91 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
92 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
93 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
94 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
106 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
107 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
108 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
109 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
110 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
111 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
114 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
115 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
119 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
120 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
121 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
122 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
123 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
124 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
125 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
126 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
127 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
128 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
129 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
130 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
131 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
132 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
137 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
138 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
139 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
140 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
141 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
142 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
143 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
144 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
145 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
146 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
147 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
148 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
149 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
150 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
151 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
152 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
153 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
163 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
164 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
165 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
170 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
171 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
172 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
173 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
174 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
175 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
176 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
177 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
178 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
179 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
180 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
181 2643221618 Ensifer sp. Root231 Isolate Unclassified
182 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
183 2643221638 Duganella sp. Root336D2 Isolate Unclassified
184 2643221655 Ensifer sp. Root1252 Isolate Unclassified
185 2643221659 Ensifer sp. Root127 Isolate Unclassified
186 2643221712 Ensifer sp. Root258 Isolate Unclassified
187 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
188 2734482258 Glomeribacter sp. phylotype 3 Isolate Unclassified
189 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
190 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
191 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
192 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
193 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
194 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
195 2857553236 Duganella sp. R-74557 Isolate Unclassified
196 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
197 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
198 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
199 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
200 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
201 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
202 2919476304 Duganella sp. 3397 Isolate Unclassified
203 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
204 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
205 2924718760 Mesorhizobium sp. M8A.F.Ca.ET.023.01.1.1 Isolate Nodule
206 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
207 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
208 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
209 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
210 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
211 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
212 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
213 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
214 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
215 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
216 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
217 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
218 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
219 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
220 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
221 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
222 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
223 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
224 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
225 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
226 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
227 3004289098 Mesorhizobium sp. M8A.F.Ca.ET.023.02.2.1 Isolate Nodule
228 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
229 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.18
Metatranscriptomes 0
Isolates 16.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.94
Nodule 9.17
Rhizoplane 3.98
Rhizosphere 48.62
Stem 0
Stem Tuber 0
Unclassified 0.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10248237 3300010375 Bacteria 1999
2 MBSR1b_contig_8516489 2162886012 Bacteria 3003
3 MBSR1b_contig_9706825 2162886012 Bacteria 3017
4 JGI24735J21928_10009472 3300002067 Bacteria 3126
5 JGI25158J39367_1001989 3300002739 Bacteria 3439
6 JGI25158J39367_1002345 3300002739 Bacteria 3100
7 JGI25152J39213_1000105 3300002773 Bacteria 58863
8 JGI25150J39212_1000374 3300002774 Bacteria 21577
9 JGI25150J39212_1001628 3300002774 Bacteria 6112
10 JGI25159J45721_1001061 3300002987 Bacteria 11738
11 JGI25159J45721_1002900 3300002987 Bacteria 6262
12 JGI25153J46596_10001671 3300003215 Bacteria 13152
13 JGI25153J46596_10004912 3300003215 Bacteria 7107
14 rootH2_10118656 3300003320 Bacteria 2913
15 rootL2_10024185 3300003322 Bacteria 1929
16 rootL2_10034039 3300003322 Bacteria 8273
17 rootL2_10111359 3300003322 Bacteria 1487
18 rootL2_10135092 3300003322 Bacteria 1937
19 rootL2_10157696 3300003322 Bacteria 1221
20 rootH1_10287655 3300003323 Bacteria 2000
21 JGI25160J50197_1000080 3300003354 Bacteria 100869
22 JGI25160J50197_1004199 3300003354 Bacteria 6263
23 JGI25161J50226_1000453 3300003374 Bacteria 19004
24 Ga0055526_1002591 3300003771 Bacteria 12088
25 Ga0055526_1006582 3300003771 Bacteria 6264
26 Ga0055537_1001398 3300003773 Bacteria 9559
27 Ga0055524_1001579 3300003775 Bacteria 12780
28 Ga0055524_1003713 3300003775 Bacteria 7299
29 Ga0055524_1006663 3300003775 Bacteria 4992
30 Ga0055534_1004976 3300003784 Bacteria 3695
31 Ga0055534_1005993 3300003784 Bacteria 3143
32 Ga0055528_1002690 3300003790 Bacteria 9379
33 Ga0055530_10001373 3300003791 Bacteria 18061
34 Ga0055530_10002288 3300003791 Bacteria 12570
35 Ga0055530_10002362 3300003791 Bacteria 12255
36 Ga0055531_10000577 3300003794 Bacteria 31960
37 Ga0055531_10023315 3300003794 Bacteria 2326
38 Ga0055543_1000915 3300004625 Bacteria 13778
39 Ga0065165_1000211 3300005262 Bacteria 101389
40 Ga0065165_1001994 3300005262 Bacteria 19150
41 Ga0065715_10023035 3300005293 Bacteria 1648
42 Ga0070658_10139972 3300005327 Bacteria 2021
43 Ga0070658_10155282 3300005327 Bacteria 1918
44 Ga0070660_100010909 3300005339 Bacteria 6432
45 Ga0070663_100024141 3300005455 Bacteria 4087
46 Ga0070681_10101063 3300005458 Bacteria 2829
47 Ga0070681_10642169 3300005458 Unclassified 976
48 Ga0070679_100000142 3300005530 Bacteria 58286
49 Ga0070679_100039162 3300005530 Bacteria 4712
50 Ga0068853_100314678 3300005539 Bacteria 1450
51 Ga0068855_100005704 3300005563 Bacteria 15206
52 Ga0068855_100057511 3300005563 Bacteria 4558
53 Ga0068855_100166657 3300005563 Bacteria 2497
54 Ga0068855_100211249 3300005563 Unclassified 2180
55 Ga0068856_100569587 3300005614 Bacteria 1154
56 Ga0068852_100022349 3300005616 Bacteria 5072
57 Ga0075365_10320962 3300006038 Bacteria 1091
58 Ga0075366_10295965 3300006195 Bacteria 990
59 Ga0079104_1002439 3300006946 Bacteria 10044
60 Ga0079104_1004334 3300006946 Bacteria 6124
61 Ga0105250_10048273 3300009092 Bacteria 1708
62 Ga0105240_10026726 3300009093 Bacteria 7570
63 Ga0105240_10051144 3300009093 Bacteria 5203
64 Ga0105247_10132922 3300009101 Bacteria 1623
65 Ga0105243_10543002 3300009148 Bacteria 1109
66 Ga0105241_10182557 3300009174 Bacteria 1741
67 Ga0105248_11105024 3300009177 Bacteria 896
68 Ga0105237_10006660 3300009545 Bacteria 12766
69 Ga0105237_10060330 3300009545 Bacteria 3794
70 Ga0105238_10091470 3300009551 Bacteria 3030
71 Ga0105238_10120029 3300009551 Bacteria 2609
72 Ga0105239_10003560 3300010375 Bacteria 19042
73 Ga0105239_10024491 3300010375 Bacteria 6649
74 Ga0157373_10013725 3300013100 Bacteria 5939
75 Ga0157371_10130029 3300013102 Bacteria 1791
76 Ga0157370_10012153 3300013104 Bacteria 8954
77 Ga0157370_10015946 3300013104 Bacteria 7624
78 Ga0157370_10030958 3300013104 Bacteria 5240
79 Ga0157369_10062694 3300013105 Bacteria 4005
80 Ga0157374_10000106 3300013296 Bacteria 76646
81 Ga0157374_10041216 3300013296 Bacteria 4254
82 Ga0163162_10018442 3300013306 Bacteria 6838
83 Ga0157372_10001971 3300013307 Bacteria 22332
84 Ga0157372_10038393 3300013307 Bacteria 5284
85 Ga0182008_10003534 3300014497 Bacteria 9393
86 Ga0182008_10039587 3300014497 Bacteria 2355
87 Ga0182006_1000017 3300015261 Bacteria 299454
88 Ga0182006_1010197 3300015261 Bacteria 4186
89 Ga0182005_1000007 3300015265 Bacteria 490994
90 Ga0163161_10155444 3300017792 Bacteria 1741
91 Ga0214544_1000951 3300021320 Bacteria 57462
92 Ga0214542_1000082 3300021321 Bacteria 120825
93 Ga0214543_1000075 3300021327 Bacteria 120861
94 Ga0213872_10000102 3300021361 Bacteria 79440
95 Ga0213872_10038270 3300021361 Bacteria 2190
96 Ga0209436_100049 3300025208 Bacteria 66162
97 Ga0209436_100093 3300025208 Bacteria 44019
98 Ga0209436_118716 3300025208 Bacteria 977
99 Ga0209672_100452 3300025228 Bacteria 23235
100 Ga0207425_1000001 3300025245 Bacteria 2525432
101 Ga0207425_1000033 3300025245 Bacteria 245540
102 Ga0209148_1013991 3300025254 Bacteria 1427
103 Ga0209759_1005362 3300025256 Bacteria 4513
104 Ga0209129_1000003 3300025258 Bacteria 903689
105 Ga0209233_1003404 3300025261 Bacteria 5611
106 Ga0209565_1000162 3300025263 Bacteria 89049
107 Ga0209565_1000305 3300025263 Bacteria 45984
108 Ga0209565_1000474 3300025263 Bacteria 29679
109 Ga0209565_1002064 3300025263 Bacteria 7693
110 Ga0209565_1018306 3300025263 Bacteria 1516
111 Ga0209673_1032673 3300025273 Bacteria 1600
112 Ga0209130_1000438 3300025284 Bacteria 44389
113 Ga0209130_1003956 3300025284 Bacteria 5931
114 Ga0209130_1007274 3300025284 Bacteria 3443
115 Ga0209130_1014574 3300025284 Bacteria 1967
116 Ga0209675_1001160 3300025291 Bacteria 16000
117 Ga0209675_1031089 3300025291 Bacteria 1265
118 Ga0209676_1016164 3300025292 Bacteria 2709
119 Ga0209564_1000095 3300025295 Bacteria 237896
120 Ga0209564_1000748 3300025295 Bacteria 45984
121 Ga0209564_1004870 3300025295 Bacteria 7976
122 Ga0209564_1017965 3300025295 Bacteria 2722
123 Ga0209758_1000041 3300025297 Bacteria 410328
124 Ga0209758_1000078 3300025297 Bacteria 266153
125 Ga0209050_1000011 3300025298 Bacteria 914037
126 Ga0209050_1000138 3300025298 Bacteria 173923
127 Ga0209050_1002638 3300025298 Bacteria 14724
128 Ga0209256_1000255 3300025299 Bacteria 94783
129 Ga0209256_1002521 3300025299 Bacteria 14711
130 Ga0209256_1004577 3300025299 Bacteria 8570
131 Ga0207426_1000021 3300025302 Bacteria 556343
132 Ga0207426_1010895 3300025302 Bacteria 3498
133 Ga0207426_1017309 3300025302 Bacteria 2565
134 Ga0209051_1018034 3300025303 Bacteria 3137
135 Ga0209257_1000003 3300025304 Bacteria 1702593
136 Ga0209257_1008790 3300025304 Bacteria 5609
137 Ga0209257_1009625 3300025304 Bacteria 5117
138 Ga0207647_10005265 3300025904 Bacteria 9520
139 Ga0207647_10010213 3300025904 Bacteria 6633
140 Ga0207705_10031922 3300025909 Bacteria 3762
141 Ga0207695_10052510 3300025913 Bacteria 4270
142 Ga0207671_10276382 3300025914 Bacteria 1324
143 Ga0207657_10000592 3300025919 Bacteria 38372
144 Ga0207652_10003733 3300025921 Bacteria 12499
145 Ga0207694_10219199 3300025924 Bacteria 1551
146 Ga0207667_10002023 3300025949 Bacteria 25421
147 Ga0207667_10020637 3300025949 Bacteria 7322
148 Ga0207667_10217251 3300025949 Bacteria 1959
149 Ga0207667_10241006 3300025949 Unclassified 1850
150 Ga0207678_10000300 3300026067 Bacteria 44431
151 Ga0207702_10275090 3300026078 Bacteria 1590
152 Ga0209281_1005627 3300027111 Bacteria 3434
153 Ga0307517_10088037 3300028786 Bacteria 2572
154 Ga0316177_1030425 3300030731 Bacteria 6937
155 Ga0316178_1047511 3300030735 Bacteria 2178
156 Ga0265330_10000092 3300031235 Bacteria 75194
157 Ga0265332_10000018 3300031238 Bacteria 224913
158 Ga0265325_10003023 3300031241 Bacteria 11142
159 Ga0307509_10131273 3300031507 Bacteria 2460
160 Ga0307408_100000530 3300031548 Bacteria 32976
161 Ga0307408_100004073 3300031548 Bacteria 9969
162 Ga0307408_100037519 3300031548 Bacteria 3414
163 Ga0307408_100143226 3300031548 Bacteria 1878
164 Ga0265314_10000266 3300031711 Bacteria 76574
165 Ga0307516_10021059 3300031730 Bacteria 6723
166 Ga0307516_10140053 3300031730 Bacteria 2189
167 Ga0307406_10014093 3300031901 Bacteria 4594
168 Ga0307507_10137663 3300033179 Bacteria 1884
169 Ga0395900_0000131 3300037418 Bacteria 125554
170 Ga0395898_0001532 3300037466 Bacteria 31823
171 Ga0395898_0742577 3300037466 Bacteria 923
172 Ga0395905_0000004 3300037471 Bacteria 674991
173 Ga0395905_0002868 3300037471 Bacteria 18825
174 Ga0395905_0060395 3300037471 Bacteria 3544
175 Ga0395905_0118974 3300037471 Bacteria 2483
176 Ga0395905_0272569 3300037471 Bacteria 1578
177 Ga0395901_0151224 3300038443 Bacteria 2439
178 Ga0436361_0592838 3300039447 Bacteria 1040
179 Ga0436361_0691793 3300039447 Bacteria 41414
180 Ga0436361_0943408 3300039447 Bacteria 4455
181 Ga0439436_0000737 3300041404 Bacteria 8828
182 Ga0451837_1075160 3300041494 Bacteria 2077
183 Ga0451853_0116888 3300041512 Bacteria 949
184 Ga0439448_0065096 3300042005 Bacteria 1208
185 Ga0450906_016877 3300042145 Bacteria 1320
186 Ga0439446_0000096 3300042156 Bacteria 15002
187 Ga0451577_0143310 3300042876 Bacteria 2148
188 Ga0466966_0038341 3300044684 Bacteria 3088
189 Ga0466961_0019753 3300044693 Bacteria 4335
190 Ga0453684_1006569 3300044712 Bacteria 886
191 Ga0466970_0029242 3300044765 Bacteria 2900
192 Ga0466959_0047826 3300045049 Bacteria 3145
193 Ga0495627_000008 3300046453 Bacteria 572150
194 Ga0495603_0014201 3300046455 Bacteria 4818
195 Ga0495605_0014402 3300046474 Bacteria 4334
196 Ga0495585_0164459 3300046492 Bacteria 1150
197 Ga0495607_0001028 3300046501 Bacteria 25612
198 Ga0495583_0002453 3300046506 Bacteria 15830
199 Ga0495583_0005903 3300046506 Bacteria 8146
200 Ga0495606_0027476 3300046507 Bacteria 4034
201 Ga0495606_0051151 3300046507 Bacteria 2697
202 Ga0495616_0125566 3300046513 Bacteria 1180
203 Ga0495643_0031683 3300046522 Bacteria 2941
204 Ga0495644_0001449 3300046523 Bacteria 9684
205 Ga0495648_0025398 3300046524 Bacteria 4011
206 Ga0495648_0063938 3300046524 Bacteria 2170
207 Ga0495642_0150564 3300046528 Bacteria 1006
208 Ga0495665_0048352 3300046531 Bacteria 2255
209 Ga0495609_0000250 3300046538 Bacteria 50865
210 Ga0495609_0001308 3300046538 Bacteria 16976
211 Ga0495609_0036577 3300046538 Bacteria 2216
212 Ga0495597_0009628 3300046542 Bacteria 4764
213 Ga0495597_0089015 3300046542 Bacteria 1312
214 Ga0495625_0002014 3300046660 Bacteria 22894
215 Ga0495625_0003570 3300046660 Bacteria 15339
216 Ga0495625_0417055 3300046660 Bacteria 836
217 Ga0495661_0031194 3300046665 Bacteria 3386
218 Ga0495661_0080149 3300046665 Bacteria 1885
219 Ga0495658_0013425 3300046683 Bacteria 4170
220 Ga0495669_0108726 3300046684 Bacteria 1293
221 Ga0495624_0178219 3300046690 Bacteria 1296
222 Ga0495671_0088145 3300046692 Bacteria 1520
223 Ga0495671_0172819 3300046692 Bacteria 1050
224 Ga0495649_0047981 3300046694 Bacteria 2321
225 Ga0495649_0199501 3300046694 Bacteria 1039
226 Ga0495589_0046708 3300046794 Bacteria 2148
227 Ga0495660_0000521 3300046810 Bacteria 31551
228 Ga0495660_0000643 3300046810 Bacteria 27143
229 Ga0495636_0037591 3300047318 Bacteria 1999
230 Ga0495674_0014641 3300047319 Bacteria 7340
231 Ga0495672_0040890 3300047320 Bacteria 2808
232 Ga0495683_0048455 3300047323 Bacteria 2130
233 Ga0495687_021096 3300047443 Bacteria 3162
234 Ga0495677_0062837 3300047445 Bacteria 1378
235 Ga0495679_031613 3300047446 Bacteria 1706
236 Ga0495685_035327 3300047447 Bacteria 1717
237 Ga0495673_0016454 3300047469 Bacteria 3780
238 Ga0495681_0007639 3300047470 Bacteria 6876
239 Ga0495681_0015821 3300047470 Bacteria 4256
240 Ga0495686_0000045 3300047472 Bacteria 284761
241 Ga0495626_0000569 3300048091 Bacteria 36626
242 Ga0495626_0002599 3300048091 Bacteria 12342
243 Ga0495626_0003580 3300048091 Bacteria 9899
244 Ga0496100_0007324 3300048903 Bacteria 6077
245 Ga0496102_0000161 3300048905 Bacteria 90439
246 Ga0496102_0565054 3300048905 Bacteria 1060
247 Ga0496103_0002106 3300048906 Bacteria 12686
248 Ga0496104_0071874 3300048907 Bacteria 3289
249 Ga0496105_0034741 3300048908 Bacteria 4147
250 Ga0496107_0215739 3300048910 Bacteria 1427
251 Ga0496112_0139779 3300048915 Bacteria 2391
252 Ga0496112_0143224 3300048915 Bacteria 2359
253 Ga0496113_0014523 3300048916 Bacteria 5375
254 Ga0496116_0122665 3300048919 Bacteria 1500
255 Ga0496117_0006681 3300048920 Bacteria 11550
256 Ga0496118_0001591 3300048921 Bacteria 33636
257 Ga0496119_0019384 3300048922 Bacteria 5014
258 Ga0496121_0000799 3300048924 Bacteria 57432
259 Ga0496121_0175538 3300048924 Bacteria 1551
260 Ga0496123_0069792 3300048926 Bacteria 2204
261 Ga0496124_0019016 3300048927 Bacteria 6411
262 Ga0496124_0232628 3300048927 Bacteria 1377
263 Ga0496126_0053273 3300048929 Bacteria 3672
264 Ga0496126_0157776 3300048929 Bacteria 1941
265 Ga0496126_0204311 3300048929 Bacteria 1666
266 Ga0496126_0290786 3300048929 Bacteria 1351
267 Ga0495678_000032 3300049459 Bacteria 212537
268 Ga0495682_0035698 3300049460 Bacteria 1830
269 Ga0501034_0171982 3300049571 Bacteria 2133
270 Ga0500595_055362 3300053119 Bacteria 1215
271 Ga0500568_0006212 3300053139 Bacteria 6032
272 Ga0500634_0053732 3300053161 Bacteria 2160
273 2503200161 2503198000 Bacteria 6884444
274 2511385850 2511231026 Bacteria 5225445
275 2563060416 2562617112 Bacteria 10918404
276 2643787900 2643221554 Bacteria 6603920
277 2643983692 2643221595 Bacteria 6565519
278 2644104475 2643221618 Bacteria 7717186
279 2644157376 2643221627 Bacteria 6761570
280 2644212030 2643221638 Bacteria 6579467
281 2644307863 2643221655 Bacteria 7722067
282 2644333594 2643221659 Bacteria 7890716
283 2644614018 2643221712 Bacteria 7729434
284 2713475590 2711768613 Bacteria 11048459
285 2735817123 2734482258 Unclassified 2930739
286 2765469428 2765235802 Bacteria 5618596
287 2770196140 2767802442 Bacteria 5747986
288 2770199916 2767802442 Bacteria 5747986
289 2792580152 2791355082 Bacteria 5973319
290 2838075772 2838074704 Bacteria 6785777
291 2839996785 2839993093 Bacteria 5512535
292 2856323648 2856320880 Bacteria 7263508
293 2857556106 2857553236 Bacteria 6166726
294 2869278856 2869278585 Bacteria 7077053
295 2874145446 2874139085 Bacteria 7021506
296 2878743749 2878738818 Bacteria 7136951
297 2891373968 2891373044 Bacteria 5202277
298 2896388220 2896384573 Bacteria 7700774
299 2913296672 2913295892 Bacteria 6333755
300 2919478380 2919476304 Bacteria 5888696
301 2920764329 2920760137 Bacteria 7427611
302 2921650213 2921643360 Bacteria 11448031
303 2924724234 2924718760 Bacteria 6331356
304 2924768268 2924762789 Bacteria 6561353
305 2924781562 2924776078 Bacteria 7492003
306 2928525673 2928521798 Bacteria 4960112
307 2937853264 2937848649 Bacteria 6983481
308 2937879217 2937877337 Bacteria 7246526
309 2937975051 2937972304 Bacteria 7532020
310 2941506194 2941499720 Bacteria 7599444
311 2958034971 2958034702 Bacteria 6989922
312 2958042899 2958041894 Bacteria 13082850
313 2958086391 2958084443 Bacteria 7312792
314 2958096918 2958092219 Bacteria 6861151
315 2958150485 2958144490 Bacteria 6677056
316 2968017568 2968016561 Bacteria 7022047
317 2970472256 2970469710 Bacteria 6969209
318 2970593451 2970593180 Bacteria 7073582
319 2977925677 2977922695 Bacteria 6956781
320 2987671313 2987666974 Bacteria 6509233
321 2996351128 2996348954 Bacteria 7239054
322 3004217211 3004211236 Bacteria 7417683
323 3004220523 3004218560 Bacteria 7421728
324 3004277826 3004275668 Bacteria 7114440
325 3004290344 3004289098 Bacteria 6135450
326 8005662090 8005658619 Bacteria 4500593
327 8049298555 8049293176 Bacteria 6128433
328 Ga0105239_10248237
329 MBSR1b_contig_8516489
330 MBSR1b_contig_9706825
331 JGI24735J21928_10009472
332 JGI25158J39367_1001989
333 JGI25158J39367_1002345
334 JGI25152J39213_1000105
335 JGI25150J39212_1000374
336 JGI25150J39212_1001628
337 JGI25159J45721_1001061
338 JGI25159J45721_1002900
339 JGI25153J46596_10001671
340 JGI25153J46596_10004912
341 rootH2_10118656
342 rootL2_10024185
343 rootL2_10034039
344 rootL2_10111359
345 rootL2_10135092
346 rootL2_10157696
347 rootH1_10287655
348 JGI25160J50197_1000080
349 JGI25160J50197_1004199
350 JGI25161J50226_1000453
351 Ga0055526_1002591
352 Ga0055526_1006582
353 Ga0055537_1001398
354 Ga0055524_1001579
355 Ga0055524_1003713
356 Ga0055524_1006663
357 Ga0055534_1004976
358 Ga0055534_1005993
359 Ga0055528_1002690
360 Ga0055530_10001373
361 Ga0055530_10002288
362 Ga0055530_10002362
363 Ga0055531_10000577
364 Ga0055531_10023315
365 Ga0055543_1000915
366 Ga0065165_1000211
367 Ga0065165_1001994
368 Ga0065715_10023035
369 Ga0070658_10139972
370 Ga0070658_10155282
371 Ga0070660_100010909
372 Ga0070663_100024141
373 Ga0070681_10101063
374 Ga0070681_10642169
375 Ga0070679_100000142
376 Ga0070679_100039162
377 Ga0068853_100314678
378 Ga0068855_100005704
379 Ga0068855_100057511
380 Ga0068855_100166657
381 Ga0068855_100211249
382 Ga0068856_100569587
383 Ga0068852_100022349
384 Ga0075365_10320962
385 Ga0075366_10295965
386 Ga0079104_1002439
387 Ga0079104_1004334
388 Ga0105250_10048273
389 Ga0105240_10026726
390 Ga0105240_10051144
391 Ga0105247_10132922
392 Ga0105243_10543002
393 Ga0105241_10182557
394 Ga0105248_11105024
395 Ga0105237_10006660
396 Ga0105237_10060330
397 Ga0105238_10091470
398 Ga0105238_10120029
399 Ga0105239_10003560
400 Ga0105239_10024491
401 Ga0157373_10013725
402 Ga0157371_10130029
403 Ga0157370_10012153
404 Ga0157370_10015946
405 Ga0157370_10030958
406 Ga0157369_10062694
407 Ga0157374_10000106
408 Ga0157374_10041216
409 Ga0163162_10018442
410 Ga0157372_10001971
411 Ga0157372_10038393
412 Ga0182008_10003534
413 Ga0182008_10039587
414 Ga0182006_1000017
415 Ga0182006_1010197
416 Ga0182005_1000007
417 Ga0163161_10155444
418 Ga0214544_1000951
419 Ga0214542_1000082
420 Ga0214543_1000075
421 Ga0213872_10000102
422 Ga0213872_10038270
423 Ga0209436_100049
424 Ga0209436_100093
425 Ga0209436_118716
426 Ga0209672_100452
427 Ga0207425_1000001
428 Ga0207425_1000033
429 Ga0209148_1013991
430 Ga0209759_1005362
431 Ga0209129_1000003
432 Ga0209233_1003404
433 Ga0209565_1000162
434 Ga0209565_1000305
435 Ga0209565_1000474
436 Ga0209565_1002064
437 Ga0209565_1018306
438 Ga0209673_1032673
439 Ga0209130_1000438
440 Ga0209130_1003956
441 Ga0209130_1007274
442 Ga0209130_1014574
443 Ga0209675_1001160
444 Ga0209675_1031089
445 Ga0209676_1016164
446 Ga0209564_1000095
447 Ga0209564_1000748
448 Ga0209564_1004870
449 Ga0209564_1017965
450 Ga0209758_1000041
451 Ga0209758_1000078
452 Ga0209050_1000011
453 Ga0209050_1000138
454 Ga0209050_1002638
455 Ga0209256_1000255
456 Ga0209256_1002521
457 Ga0209256_1004577
458 Ga0207426_1000021
459 Ga0207426_1010895
460 Ga0207426_1017309
461 Ga0209051_1018034
462 Ga0209257_1000003
463 Ga0209257_1008790
464 Ga0209257_1009625
465 Ga0207647_10005265
466 Ga0207647_10010213
467 Ga0207705_10031922
468 Ga0207695_10052510
469 Ga0207671_10276382
470 Ga0207657_10000592
471 Ga0207652_10003733
472 Ga0207694_10219199
473 Ga0207667_10002023
474 Ga0207667_10020637
475 Ga0207667_10217251
476 Ga0207667_10241006
477 Ga0207678_10000300
478 Ga0207702_10275090
479 Ga0209281_1005627
480 Ga0307517_10088037
481 Ga0316177_1030425
482 Ga0316178_1047511
483 Ga0265330_10000092
484 Ga0265332_10000018
485 Ga0265325_10003023
486 Ga0307509_10131273
487 Ga0307408_100000530
488 Ga0307408_100004073
489 Ga0307408_100037519
490 Ga0307408_100143226
491 Ga0265314_10000266
492 Ga0307516_10021059
493 Ga0307516_10140053
494 Ga0307406_10014093
495 Ga0307507_10137663
496 Ga0395900_0000131
497 Ga0395898_0001532
498 Ga0395898_0742577
499 Ga0395905_0000004
500 Ga0395905_0002868
501 Ga0395905_0060395
502 Ga0395905_0118974
503 Ga0395905_0272569
504 Ga0395901_0151224
505 Ga0436361_0592838
506 Ga0436361_0691793
507 Ga0436361_0943408
508 Ga0439436_0000737
509 Ga0451837_1075160
510 Ga0451853_0116888
511 Ga0439448_0065096
512 Ga0450906_016877
513 Ga0439446_0000096
514 Ga0451577_0143310
515 Ga0466966_0038341
516 Ga0466961_0019753
517 Ga0453684_1006569
518 Ga0466970_0029242
519 Ga0466959_0047826
520 Ga0495627_000008
521 Ga0495603_0014201
522 Ga0495605_0014402
523 Ga0495585_0164459
524 Ga0495607_0001028
525 Ga0495583_0002453
526 Ga0495583_0005903
527 Ga0495606_0027476
528 Ga0495606_0051151
529 Ga0495616_0125566
530 Ga0495643_0031683
531 Ga0495644_0001449
532 Ga0495648_0025398
533 Ga0495648_0063938
534 Ga0495642_0150564
535 Ga0495665_0048352
536 Ga0495609_0000250
537 Ga0495609_0001308
538 Ga0495609_0036577
539 Ga0495597_0009628
540 Ga0495597_0089015
541 Ga0495625_0002014
542 Ga0495625_0003570
543 Ga0495625_0417055
544 Ga0495661_0031194
545 Ga0495661_0080149
546 Ga0495658_0013425
547 Ga0495669_0108726
548 Ga0495624_0178219
549 Ga0495671_0088145
550 Ga0495671_0172819
551 Ga0495649_0047981
552 Ga0495649_0199501
553 Ga0495589_0046708
554 Ga0495660_0000521
555 Ga0495660_0000643
556 Ga0495636_0037591
557 Ga0495674_0014641
558 Ga0495672_0040890
559 Ga0495683_0048455
560 Ga0495687_021096
561 Ga0495677_0062837
562 Ga0495679_031613
563 Ga0495685_035327
564 Ga0495673_0016454
565 Ga0495681_0007639
566 Ga0495681_0015821
567 Ga0495686_0000045
568 Ga0495626_0000569
569 Ga0495626_0002599
570 Ga0495626_0003580
571 Ga0496100_0007324
572 Ga0496102_0000161
573 Ga0496102_0565054
574 Ga0496103_0002106
575 Ga0496104_0071874
576 Ga0496105_0034741
577 Ga0496107_0215739
578 Ga0496112_0139779
579 Ga0496112_0143224
580 Ga0496113_0014523
581 Ga0496116_0122665
582 Ga0496117_0006681
583 Ga0496118_0001591
584 Ga0496119_0019384
585 Ga0496121_0000799
586 Ga0496121_0175538
587 Ga0496123_0069792
588 Ga0496124_0019016
589 Ga0496124_0232628
590 Ga0496126_0053273
591 Ga0496126_0157776
592 Ga0496126_0204311
593 Ga0496126_0290786
594 Ga0495678_000032
595 Ga0495682_0035698
596 Ga0501034_0171982
597 Ga0500595_055362
598 Ga0500568_0006212
599 Ga0500634_0053732
600 2503200161
601 2511385850
602 2563060416
603 2643787900
604 2643983692
605 2644104475
606 2644157376
607 2644212030
608 2644307863
609 2644333594
610 2644614018
611 2713475590
612 2735817123
613 2765469428
614 2770196140
615 2770199916
616 2792580152
617 2838075772
618 2839996785
619 2856323648
620 2857556106
621 2869278856
622 2874145446
623 2878743749
624 2891373968
625 2896388220
626 2913296672
627 2919478380
628 2920764329
629 2921650213
630 2924724234
631 2924768268
632 2924781562
633 2928525673
634 2937853264
635 2937879217
636 2937975051
637 2941506194
638 2958034971
639 2958042899
640 2958086391
641 2958096918
642 2958150485
643 2968017568
644 2970472256
645 2970593451
646 2977925677
647 2987671313
648 2996351128
649 3004217211
650 3004220523
651 3004277826
652 3004290344
653 8005662090
654 8049298555

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06912

DUF1275

Protein of unknown function (DUF1275)

64

280

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
8sdy-assembly1.cif.gz_A structure of rat organic anion transporter 1 (oat1) in complex with para-aminohippuric acid (pah) 0.5778 26 247
8sc6-assembly1.cif.gz_A human oct1 bound to thiamine in inward-open conformation 0.5697 20 245
8sdz-assembly1.cif.gz_A structure of rat organic anion transporter 1 (oat1) in complex with probenecid 0.5603 26 247
8hpj-assembly1.cif.gz_A crystal structure of the bacterial oxalate transporter oxlt in a ligand-free outward-facing form 0.5595 26 248
8hpk-assembly1.cif.gz_A crystal structure of the bacterial oxalate transporter oxlt in an oxalate-bound occluded form 0.5574 26 245
ID Description Score Start End Superfamily
af_O96186_278_457_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.6094 29 246 1.20.1250.20
af_O96186_278_457_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5934 29 246 1.20.1250.20
af_Q2FXH1_4_180_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5819 29 243 1.20.1250.20
af_A0A4V0IJT1_312_502_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5819 21 245 1.20.1250.20
af_P9WJY5_55_296_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5802 29 245 1.20.1250.20
ID Description Score Start End GO Terms
AF-A2WJ22-F1-model_v4 deleted 0.9594 9 259
AF-A0A558D5X1-F1-model_v4 DUF1275 domain-containing protein 0.9548 9 257 GO:0016020
AF-A0A7W4VH14-F1-model_v4 Uncharacterized membrane protein YoaK (UPF0700 family) 0.9529 11 257 GO:0016020
AF-A0A1W9QC55-F1-model_v4 DUF1275 family protein 0.9527 10 254 GO:0016020
AF-F4QIG2-F1-model_v4 DUF1275 domain-containing protein 0.9527 10 259 GO:0016020

Map