F408558

General Info

Members Datasets Scaffolds Average Seq Length
326 165 652 322

Family's Representative Sequence

Representative Sequence 3300053077|Ga0495601_0035936|Ga0495601_0035936_195_1340
Length 359
Sequence MRPHAWRKRPMMDEAACVAMTPHALLRRLLNVSKTTGSAALSQRSDMVVFLNGEYIPADQARVGIATHALSYGTGCFEGIRAYYNSDTEQLYIFRALEHYQRLARSCKIMNITLPYTPEELVEITTELIRRNGFRENCYIRPFAYKADEIIGVKLNGLRDDFTMFTLPMGDYIATSGLRCMVSSWRRIDDNMIPARAKVSGAYVNSAFAKSEALMSGFDEAIMLTHEGHVSEGSAENIFLVTGGELVTPPPTENILQGITRDSVMEIARRELEMLTRERVIDRTELYTADEIFFTGTGAQIAPVIEVEHRSVGAGVVGPVSQQLVSLYGDVTRGRRAEYMHWLTPVWEPAHGKTTASKK

Samples

Sample ID Description Type Environment
1 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300003349 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
46 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
60 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
63 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
64 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
66 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
95 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
96 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
97 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
98 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
99 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
100 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
101 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
102 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
103 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
104 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
105 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
106 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
107 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
108 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
111 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
112 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
113 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
114 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
115 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
116 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
117 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
118 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
119 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
120 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
125 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
133 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
158 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
161 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
162 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
163 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
164 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
165 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.17
Metatranscriptomes 4.91
Isolates 0.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.61
Nodule 0
Rhizoplane 2.15
Rhizosphere 93.25
Stem 0
Stem Tuber 0
Unclassified 12.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495601_0035936 3300053077 Bacteria 3094
2 JGI25162J39368_1004388 3300002737 Bacteria 3308
3 JGI26129J50193_1001436 3300003349 Archaea 1617
4 Ga0065715_10000289 3300005293 Bacteria 20354
5 Ga0065715_10007152 3300005293 Bacteria 2718
6 Ga0065707_10017119 3300005295 Archaea 1689
7 Ga0065707_10041389 3300005295 Bacteria 1220
8 Ga0065707_10107251 3300005295 Bacteria 2562
9 Ga0070683_100001929 3300005329 Bacteria 16238
10 Ga0070683_100012204 3300005329 Bacteria 7458
11 Ga0070683_100101418 3300005329 Unclassified 2710
12 Ga0070680_100101657 3300005336 Bacteria 2386
13 Ga0070680_100346665 3300005336 Bacteria 1263
14 Ga0070691_10004271 3300005341 Bacteria 6488
15 Ga0070687_100020848 3300005343 Bacteria 3072
16 Ga0070687_100058578 3300005343 Bacteria 2024
17 Ga0070661_100163855 3300005344 Unclassified 1685
18 Ga0070692_10032952 3300005345 Unclassified 2609
19 Ga0070692_10176144 3300005345 Bacteria 1236
20 Ga0070692_10241388 3300005345 Bacteria 1077
21 Ga0070673_100099238 3300005364 Unclassified 2395
22 Ga0070703_10004531 3300005406 Bacteria 3910
23 Ga0070709_10000159 3300005434 Bacteria 43637
24 Ga0070709_10184409 3300005434 Bacteria 1468
25 Ga0070713_100045951 3300005436 Bacteria 3581
26 Ga0070705_100005621 3300005440 Bacteria 6119
27 Ga0070705_100046188 3300005440 Bacteria 2509
28 Ga0070694_100054410 3300005444 Bacteria 2711
29 Ga0070694_100095942 3300005444 Bacteria 2089
30 Ga0070708_100000874 3300005445 Bacteria 22766
31 Ga0070708_100047886 3300005445 Bacteria 3777
32 Ga0070708_100051321 3300005445 Bacteria 3654
33 Ga0070708_100060159 3300005445 Unclassified 3390
34 Ga0070708_100133088 3300005445 Unclassified 2302
35 Ga0070708_100336833 3300005445 Bacteria 1422
36 Ga0070681_10034868 3300005458 Bacteria 5053
37 Ga0070681_10176432 3300005458 Bacteria 2059
38 Ga0070706_100000641 3300005467 Bacteria 40007
39 Ga0070706_100000718 3300005467 Bacteria 37282
40 Ga0070706_100001548 3300005467 Bacteria 24042
41 Ga0070706_100004930 3300005467 Bacteria 12776
42 Ga0070706_100009532 3300005467 Bacteria 9028
43 Ga0070706_100044411 3300005467 Bacteria 4106
44 Ga0070706_100058815 3300005467 Bacteria 3547
45 Ga0070706_100072681 3300005467 Bacteria 3182
46 Ga0070706_100099386 3300005467 Bacteria 2704
47 Ga0070706_100102594 3300005467 Bacteria 2659
48 Ga0070706_100120935 3300005467 Bacteria 2441
49 Ga0070706_100158568 3300005467 Unclassified 2113
50 Ga0070706_100237535 3300005467 Bacteria 1702
51 Ga0070706_100242228 3300005467 Bacteria 1684
52 Ga0070706_100277596 3300005467 Bacteria 1564
53 Ga0070707_100002567 3300005468 Bacteria 17250
54 Ga0070707_100004721 3300005468 Bacteria 12769
55 Ga0070707_100014057 3300005468 Bacteria 7500
56 Ga0070707_100014178 3300005468 Bacteria 7470
57 Ga0070707_100082746 3300005468 Bacteria 3100
58 Ga0070707_100085911 3300005468 Bacteria 3042
59 Ga0070707_100138147 3300005468 Unclassified 2371
60 Ga0070707_100230946 3300005468 Unclassified 1801
61 Ga0070707_100275403 3300005468 Bacteria 1636
62 Ga0070698_100000161 3300005471 Bacteria 61404
63 Ga0070698_100013062 3300005471 Bacteria 8793
64 Ga0070698_100015606 3300005471 Bacteria 8022
65 Ga0070698_100020753 3300005471 Bacteria 6885
66 Ga0070698_100030590 3300005471 Bacteria 5581
67 Ga0070698_100049252 3300005471 Bacteria 4301
68 Ga0070698_100074473 3300005471 Bacteria 3400
69 Ga0070698_100169849 3300005471 Bacteria 2122
70 Ga0070698_100193800 3300005471 Unclassified 1969
71 Ga0070698_100322395 3300005471 Bacteria 1476
72 Ga0070698_100373758 3300005471 Bacteria 1358
73 Ga0070699_100000041 3300005518 Bacteria 128767
74 Ga0070699_100007418 3300005518 Bacteria 9545
75 Ga0070699_100011358 3300005518 Bacteria 7690
76 Ga0070699_100033782 3300005518 Bacteria 4420
77 Ga0070699_100043217 3300005518 Bacteria 3901
78 Ga0070699_100156334 3300005518 Bacteria 2018
79 Ga0070699_100164526 3300005518 Unclassified 1964
80 Ga0070699_100394968 3300005518 Bacteria 1250
81 Ga0070679_100023918 3300005530 Bacteria 5985
82 Ga0070679_100075100 3300005530 Bacteria 3370
83 Ga0070684_100000217 3300005535 Bacteria 40133
84 Ga0070697_100002184 3300005536 Bacteria 15005
85 Ga0070697_100017080 3300005536 Bacteria 5707
86 Ga0070697_100049698 3300005536 Bacteria 3404
87 Ga0070697_100162396 3300005536 Bacteria 1887
88 Ga0070695_100042388 3300005545 Unclassified 2889
89 Ga0070695_100046527 3300005545 Bacteria 2768
90 Ga0070695_100087630 3300005545 Bacteria 2071
91 Ga0070695_100131649 3300005545 Unclassified 1725
92 Ga0070696_100002118 3300005546 Bacteria 13054
93 Ga0070696_100173680 3300005546 Bacteria 1594
94 Ga0070704_100066655 3300005549 Bacteria 2597
95 Ga0070704_100087588 3300005549 Bacteria 2311
96 Ga0070704_100242425 3300005549 Bacteria 1476
97 Ga0068855_100655458 3300005563 Bacteria 1127
98 Ga0070664_100006283 3300005564 Bacteria 9588
99 Ga0070664_100054487 3300005564 Unclassified 3393
100 Ga0068857_100009843 3300005577 Bacteria 8303
101 Ga0068856_100003694 3300005614 Bacteria 15350
102 Ga0068856_100063964 3300005614 Bacteria 3635
103 Ga0068856_100368194 3300005614 Bacteria 1456
104 Ga0068862_100389904 3300005844 Bacteria 1301
105 Ga0070717_10003439 3300006028 Bacteria 11328
106 Ga0070717_10010602 3300006028 Bacteria 6965
107 Ga0070717_10086225 3300006028 Bacteria 2643
108 Ga0070717_10541024 3300006028 Unclassified 1054
109 Ga0070712_100302876 3300006175 Bacteria 1294
110 Ga0075428_100119036 3300006844 Bacteria 2876
111 Ga0075428_100442162 3300006844 Bacteria 1393
112 Ga0075431_100056570 3300006847 Bacteria 4045
113 Ga0075433_10003052 3300006852 Bacteria 12869
114 Ga0075433_10004567 3300006852 Bacteria 10799
115 Ga0075433_10110014 3300006852 Bacteria 2444
116 Ga0075434_100027042 3300006871 Bacteria 5630
117 Ga0075434_100384484 3300006871 Bacteria 1424
118 Ga0075429_100003256 3300006880 Bacteria 13828
119 Ga0068865_100435433 3300006881 Bacteria 1081
120 Ga0075436_100058494 3300006914 Unclassified 2662
121 Ga0075436_100395539 3300006914 Bacteria 1001
122 Ga0075435_100024451 3300007076 Bacteria 4689
123 Ga0075435_100038004 3300007076 Bacteria 3837
124 Ga0075435_100075507 3300007076 Unclassified 2760
125 Ga0099794_10138518 3300007265 Archaea 1232
126 Ga0105250_10002253 3300009092 Bacteria 9797
127 Ga0105240_10206497 3300009093 Bacteria 2299
128 Ga0105240_10597397 3300009093 Bacteria 1215
129 Ga0114129_10003698 3300009147 Bacteria 21541
130 Ga0114129_10008957 3300009147 Bacteria 14266
131 Ga0114129_10098443 3300009147 Unclassified 4048
132 Ga0105243_10107259 3300009148 Bacteria 2329
133 Ga0105242_10420383 3300009176 Unclassified 1252
134 Ga0105238_10174457 3300009551 Bacteria 2126
135 Ga0105238_10411479 3300009551 Bacteria 1346
136 Ga0157373_10340210 3300013100 Bacteria 1069
137 Ga0157371_10068164 3300013102 Unclassified 2518
138 Ga0157369_10001562 3300013105 Bacteria 28045
139 Ga0157369_10010627 3300013105 Bacteria 10477
140 Ga0157372_10003800 3300013307 Bacteria 16214
141 Ga0157372_10046764 3300013307 Bacteria 4805
142 Ga0157377_10131647 3300014745 Unclassified 1528
143 Ga0206356_10683708 3300020070 Unclassified 1174
144 Ga0206356_10782200 3300020070 Bacteria 2166
145 Ga0206356_11729569 3300020070 Bacteria 2437
146 Ga0206349_1881486 3300020075 Bacteria 1216
147 Ga0206355_1627947 3300020076 Bacteria 1211
148 Ga0206350_10082538 3300020080 Unclassified 1107
149 Ga0206350_10143618 3300020080 Bacteria 1223
150 Ga0206350_10687940 3300020080 Bacteria 2306
151 Ga0206350_10763538 3300020080 Bacteria 1736
152 Ga0206350_11603251 3300020080 Bacteria 2079
153 Ga0154015_1185465 3300020610 Bacteria 1886
154 Ga0213874_10002628 3300021377 Bacteria 3894
155 Ga0213874_10002656 3300021377 Unclassified 3878
156 Ga0213876_10027627 3300021384 Unclassified 2993
157 Ga0213876_10048343 3300021384 Bacteria 2247
158 Ga0224712_10017643 3300022467 Unclassified 2371
159 Ga0224712_10019245 3300022467 Bacteria 2298
160 Ga0224712_10022581 3300022467 Bacteria 2171
161 Ga0224712_10102000 3300022467 Bacteria 1218
162 Ga0224712_10118713 3300022467 Unclassified 1143
163 Ga0209437_100032 3300025233 Bacteria 520075
164 Ga0207696_1006795 3300025711 Bacteria 4561
165 Ga0207655_1004273 3300025728 Bacteria 10217
166 Ga0207653_10000189 3300025885 Bacteria 42321
167 Ga0207653_10007445 3300025885 Bacteria 3413
168 Ga0207699_10000477 3300025906 Bacteria 20339
169 Ga0207684_10000009 3300025910 Bacteria 572126
170 Ga0207684_10000094 3300025910 Bacteria 165810
171 Ga0207684_10001602 3300025910 Bacteria 24043
172 Ga0207684_10003133 3300025910 Bacteria 16290
173 Ga0207684_10004592 3300025910 Bacteria 12978
174 Ga0207684_10010525 3300025910 Bacteria 8133
175 Ga0207684_10018073 3300025910 Bacteria 6042
176 Ga0207684_10042150 3300025910 Bacteria 3869
177 Ga0207684_10072348 3300025910 Bacteria 2928
178 Ga0207684_10158322 3300025910 Bacteria 1949
179 Ga0207707_10218061 3300025912 Bacteria 1661
180 Ga0207707_10228927 3300025912 Bacteria 1617
181 Ga0207695_10126975 3300025913 Bacteria 2511
182 Ga0207660_10034024 3300025917 Bacteria 3529
183 Ga0207660_10213094 3300025917 Bacteria 1513
184 Ga0207662_10002554 3300025918 Bacteria 9164
185 Ga0207652_10133265 3300025921 Unclassified 2217
186 Ga0207646_10001048 3300025922 Bacteria 35174
187 Ga0207646_10009559 3300025922 Bacteria 9569
188 Ga0207646_10011064 3300025922 Bacteria 8759
189 Ga0207646_10014707 3300025922 Bacteria 7414
190 Ga0207646_10017573 3300025922 Bacteria 6686
191 Ga0207646_10081007 3300025922 Bacteria 2903
192 Ga0207646_10123244 3300025922 Bacteria 2330
193 Ga0207646_10376755 3300025922 Unclassified 1282
194 Ga0207694_10282426 3300025924 Bacteria 1364
195 Ga0207700_10001888 3300025928 Bacteria 11894
196 Ga0207700_10009361 3300025928 Bacteria 6114
197 Ga0207664_10004390 3300025929 Bacteria 9553
198 Ga0207664_10043729 3300025929 Bacteria 3505
199 Ga0207664_10260093 3300025929 Unclassified 1518
200 Ga0207709_10010214 3300025935 Bacteria 5171
201 Ga0207665_10007696 3300025939 Bacteria 7113
202 Ga0207665_10023952 3300025939 Bacteria 4022
203 Ga0207661_10000632 3300025944 Bacteria 22619
204 Ga0207661_10043056 3300025944 Unclassified 3562
205 Ga0207661_10280403 3300025944 Bacteria 1489
206 Ga0207679_10012626 3300025945 Bacteria 5513
207 Ga0207640_10054951 3300025981 Bacteria 2606
208 Ga0207708_10018728 3300026075 Bacteria 5216
209 Ga0207702_10031602 3300026078 Bacteria 4413
210 Ga0207702_10036377 3300026078 Bacteria 4118
211 Ga0207702_10339914 3300026078 Bacteria 1434
212 Ga0207648_10037110 3300026089 Bacteria 4292
213 Ga0207674_10000581 3300026116 Bacteria 48108
214 Ga0207674_10006744 3300026116 Bacteria 13481
215 Ga0207675_100125277 3300026118 Bacteria 2434
216 Ga0209371_1008134 3300027312 Bacteria 3533
217 Ga0209971_1002198 3300027682 Bacteria 4739
218 Ga0209998_10000391 3300027717 Bacteria 12672
219 Ga0209974_10001115 3300027876 Bacteria 9523
220 Ga0265337_1006701 3300028556 Bacteria 4397
221 Ga0265326_10005984 3300028558 Bacteria 3807
222 Ga0265334_10035500 3300028573 Bacteria 1973
223 Ga0265322_10022973 3300028654 Bacteria 1783
224 Ga0268256_1008344 3300030500 Bacteria 3560
225 Ga0265320_10002941 3300031240 Bacteria 11674
226 Ga0265325_10049547 3300031241 Bacteria 2167
227 Ga0265331_10043319 3300031250 Bacteria 2181
228 Ga0265316_10215911 3300031344 Bacteria 1417
229 Ga0316576_10064516 3300031727 Bacteria 2690
230 Ga0316577_10000589 3300031733 Bacteria 14923
231 Ga0316577_10078910 3300031733 Bacteria 1839
232 Ga0373941_0032746 3300035115 Unclassified 1558
233 Ga0373941_0042908 3300035115 Bacteria 1406
234 Ga0316574_0133215 3300035398 Bacteria 1599
235 Ga0316574_0250381 3300035398 Bacteria 1132
236 Ga0373931_0132104 3300035691 Bacteria 1438
237 Ga0373927_0000098 3300035695 Bacteria 65705
238 Ga0373937_0260985 3300036401 Bacteria 1634
239 Ga0316584_0024484 3300036712 Bacteria 4418
240 Ga0316584_0099902 3300036712 Unclassified 2173
241 Ga0436360_0566091 3300039438 Bacteria 3410
242 Ga0436360_1230664 3300039438 Bacteria 2160
243 Ga0436361_0859037 3300039447 Unclassified 1740
244 Ga0436363_0461132 3300039450 Bacteria 8191
245 Ga0436363_1222811 3300039450 Bacteria 24127
246 Ga0436362_0326461 3300039453 Bacteria 11013
247 Ga0436362_0758423 3300039453 Bacteria 1831
248 Ga0436362_1046013 3300039453 Bacteria 2175
249 Ga0451800_1624553 3300041459 Unclassified 896
250 Ga0451853_1162128 3300041512 Bacteria 2144
251 Ga0439441_000995 3300042001 Unclassified 3484
252 Ga0450923_000716 3300042125 Bacteria 3919
253 Ga0466969_0025985 3300044656 Bacteria 3006
254 Ga0453683_0007044 3300044673 Bacteria 7660
255 Ga0466963_0344489 3300044694 Bacteria 1049
256 Ga0466957_0032836 3300044842 Bacteria 3110
257 Ga0466957_0042539 3300044842 Bacteria 2749
258 Ga0466959_0009083 3300045049 Bacteria 7055
259 Ga0451576_0079091 3300045051 Bacteria 3421
260 Ga0466958_0035045 3300045836 Bacteria 2997
261 Ga0495664_0261454 3300046477 Unclassified 1046
262 Ga0496102_0003750 3300048905 Bacteria 12848
263 Ga0496104_0171279 3300048907 Bacteria 2082
264 Ga0496108_0143054 3300048911 Unclassified 2061
265 Ga0496109_0119815 3300048912 Unclassified 2451
266 Ga0496112_0060747 3300048915 Bacteria 3725
267 Ga0496112_0072942 3300048915 Bacteria 3394
268 Ga0496116_0025421 3300048919 Bacteria 4352
269 Ga0496117_0000017 3300048920 Bacteria 490421
270 Ga0496118_0000018 3300048921 Bacteria 490421
271 Ga0496124_0134181 3300048927 Bacteria 1962
272 Ga0501037_0001151 3300049573 Bacteria 19574
273 Ga0501037_0199578 3300049573 Bacteria 1414
274 Ga0501038_0109479 3300049574 Bacteria 2289
275 Ga0501040_0144483 3300049576 Bacteria 1676
276 Ga0501041_0115990 3300049577 Bacteria 1663
277 Ga0501042_0114617 3300049578 Bacteria 1941
278 Ga0501042_0308252 3300049578 Bacteria 1144
279 Ga0501047_0221552 3300049581 Bacteria 1748
280 Ga0501068_0048460 3300049584 Unclassified 2565
281 Ga0501070_0178247 3300049586 Bacteria 1749
282 Ga0501071_0037221 3300049587 Bacteria 3473
283 Ga0501071_0199638 3300049587 Bacteria 1502
284 Ga0501072_0037938 3300049588 Bacteria 3780
285 Ga0501072_0074467 3300049588 Bacteria 2685
286 Ga0501072_0126057 3300049588 Bacteria 2040
287 Ga0501074_0059704 3300049590 Bacteria 2747
288 Ga0501075_0052508 3300049591 Bacteria 3065
289 Ga0501075_0123562 3300049591 Bacteria 1970
290 Ga0501076_0020942 3300049592 Bacteria 5009
291 Ga0501076_0072229 3300049592 Bacteria 2761
292 Ga0501076_0159711 3300049592 Bacteria 1836
293 Ga0501076_0473777 3300049592 Bacteria 1031
294 Ga0501077_0005863 3300049593 Bacteria 7486
295 Ga0501077_0108458 3300049593 Bacteria 1759
296 Ga0501077_0204297 3300049593 Bacteria 1255
297 Ga0501079_0008969 3300049741 Bacteria 7574
298 Ga0501079_0053903 3300049741 Bacteria 3102
299 Ga0501080_0021513 3300049742 Bacteria 5970
300 Ga0501080_0235579 3300049742 Bacteria 1672
301 Ga0501044_0007673 3300049823 Bacteria 11862
302 nmdc:mga05p37_198633_c1 3300050507 Unclassified 2430
303 nmdc:mga05p37_3653_c1 3300050507 Bacteria 17993
304 nmdc:mga05p37_42607_c1 3300050507 Bacteria 5579
305 nmdc:mga05p37_480805_c1 3300050507 Bacteria 1431
306 nmdc:mga05p37_61663_c1 3300050507 Unclassified 4616
307 nmdc:mga09592_5424_c1 3300050508 Bacteria 10366
308 nmdc:mga06r32_64920_c1 3300050510 Bacteria 3520
309 nmdc:mga0n895_26205_c1 3300050512 Bacteria 5517
310 nmdc:mga0n895_36874_c1 3300050512 Bacteria 4724
311 nmdc:mga0rr50_16774_c1 3300050513 Bacteria 4874
312 nmdc:mga0rr50_24466_c1 3300050513 Bacteria 4182
313 nmdc:mga0rr50_47282_c1 3300050513 Bacteria 3173
314 nmdc:mga08x19_22225_c1 3300050514 Bacteria 3926
315 nmdc:mga08x19_24343_c1 3300050514 Bacteria 3761
316 nmdc:mga08x19_360379_c1 3300050514 Bacteria 1016
317 nmdc:mga0a205_30622_c1 3300050515 Bacteria 5154
318 Ga0501084_0123824 3300054114 Bacteria 2174
319 Ga0501082_0022480 3300060353 Bacteria 5432
320 Ga0501082_0102099 3300060353 Bacteria 2481
321 Ga0501082_0134956 3300060353 Bacteria 2141
322 Ga0530510_0110791 3300061734 Bacteria 2010
323 Ga0530510_0115290 3300061734 Bacteria 1969
324 2566036101 2565956521 Bacteria 4468993
325 2857467353 2857465823 Bacteria 6772595
326 2857592235 2857591370 Bacteria 6569758
327 Ga0495601_0035936
328 JGI25162J39368_1004388
329 JGI26129J50193_1001436
330 Ga0065715_10000289
331 Ga0065715_10007152
332 Ga0065707_10017119
333 Ga0065707_10041389
334 Ga0065707_10107251
335 Ga0070683_100001929
336 Ga0070683_100012204
337 Ga0070683_100101418
338 Ga0070680_100101657
339 Ga0070680_100346665
340 Ga0070691_10004271
341 Ga0070687_100020848
342 Ga0070687_100058578
343 Ga0070661_100163855
344 Ga0070692_10032952
345 Ga0070692_10176144
346 Ga0070692_10241388
347 Ga0070673_100099238
348 Ga0070703_10004531
349 Ga0070709_10000159
350 Ga0070709_10184409
351 Ga0070713_100045951
352 Ga0070705_100005621
353 Ga0070705_100046188
354 Ga0070694_100054410
355 Ga0070694_100095942
356 Ga0070708_100000874
357 Ga0070708_100047886
358 Ga0070708_100051321
359 Ga0070708_100060159
360 Ga0070708_100133088
361 Ga0070708_100336833
362 Ga0070681_10034868
363 Ga0070681_10176432
364 Ga0070706_100000641
365 Ga0070706_100000718
366 Ga0070706_100001548
367 Ga0070706_100004930
368 Ga0070706_100009532
369 Ga0070706_100044411
370 Ga0070706_100058815
371 Ga0070706_100072681
372 Ga0070706_100099386
373 Ga0070706_100102594
374 Ga0070706_100120935
375 Ga0070706_100158568
376 Ga0070706_100237535
377 Ga0070706_100242228
378 Ga0070706_100277596
379 Ga0070707_100002567
380 Ga0070707_100004721
381 Ga0070707_100014057
382 Ga0070707_100014178
383 Ga0070707_100082746
384 Ga0070707_100085911
385 Ga0070707_100138147
386 Ga0070707_100230946
387 Ga0070707_100275403
388 Ga0070698_100000161
389 Ga0070698_100013062
390 Ga0070698_100015606
391 Ga0070698_100020753
392 Ga0070698_100030590
393 Ga0070698_100049252
394 Ga0070698_100074473
395 Ga0070698_100169849
396 Ga0070698_100193800
397 Ga0070698_100322395
398 Ga0070698_100373758
399 Ga0070699_100000041
400 Ga0070699_100007418
401 Ga0070699_100011358
402 Ga0070699_100033782
403 Ga0070699_100043217
404 Ga0070699_100156334
405 Ga0070699_100164526
406 Ga0070699_100394968
407 Ga0070679_100023918
408 Ga0070679_100075100
409 Ga0070684_100000217
410 Ga0070697_100002184
411 Ga0070697_100017080
412 Ga0070697_100049698
413 Ga0070697_100162396
414 Ga0070695_100042388
415 Ga0070695_100046527
416 Ga0070695_100087630
417 Ga0070695_100131649
418 Ga0070696_100002118
419 Ga0070696_100173680
420 Ga0070704_100066655
421 Ga0070704_100087588
422 Ga0070704_100242425
423 Ga0068855_100655458
424 Ga0070664_100006283
425 Ga0070664_100054487
426 Ga0068857_100009843
427 Ga0068856_100003694
428 Ga0068856_100063964
429 Ga0068856_100368194
430 Ga0068862_100389904
431 Ga0070717_10003439
432 Ga0070717_10010602
433 Ga0070717_10086225
434 Ga0070717_10541024
435 Ga0070712_100302876
436 Ga0075428_100119036
437 Ga0075428_100442162
438 Ga0075431_100056570
439 Ga0075433_10003052
440 Ga0075433_10004567
441 Ga0075433_10110014
442 Ga0075434_100027042
443 Ga0075434_100384484
444 Ga0075429_100003256
445 Ga0068865_100435433
446 Ga0075436_100058494
447 Ga0075436_100395539
448 Ga0075435_100024451
449 Ga0075435_100038004
450 Ga0075435_100075507
451 Ga0099794_10138518
452 Ga0105250_10002253
453 Ga0105240_10206497
454 Ga0105240_10597397
455 Ga0114129_10003698
456 Ga0114129_10008957
457 Ga0114129_10098443
458 Ga0105243_10107259
459 Ga0105242_10420383
460 Ga0105238_10174457
461 Ga0105238_10411479
462 Ga0157373_10340210
463 Ga0157371_10068164
464 Ga0157369_10001562
465 Ga0157369_10010627
466 Ga0157372_10003800
467 Ga0157372_10046764
468 Ga0157377_10131647
469 Ga0206356_10683708
470 Ga0206356_10782200
471 Ga0206356_11729569
472 Ga0206349_1881486
473 Ga0206355_1627947
474 Ga0206350_10082538
475 Ga0206350_10143618
476 Ga0206350_10687940
477 Ga0206350_10763538
478 Ga0206350_11603251
479 Ga0154015_1185465
480 Ga0213874_10002628
481 Ga0213874_10002656
482 Ga0213876_10027627
483 Ga0213876_10048343
484 Ga0224712_10017643
485 Ga0224712_10019245
486 Ga0224712_10022581
487 Ga0224712_10102000
488 Ga0224712_10118713
489 Ga0209437_100032
490 Ga0207696_1006795
491 Ga0207655_1004273
492 Ga0207653_10000189
493 Ga0207653_10007445
494 Ga0207699_10000477
495 Ga0207684_10000009
496 Ga0207684_10000094
497 Ga0207684_10001602
498 Ga0207684_10003133
499 Ga0207684_10004592
500 Ga0207684_10010525
501 Ga0207684_10018073
502 Ga0207684_10042150
503 Ga0207684_10072348
504 Ga0207684_10158322
505 Ga0207707_10218061
506 Ga0207707_10228927
507 Ga0207695_10126975
508 Ga0207660_10034024
509 Ga0207660_10213094
510 Ga0207662_10002554
511 Ga0207652_10133265
512 Ga0207646_10001048
513 Ga0207646_10009559
514 Ga0207646_10011064
515 Ga0207646_10014707
516 Ga0207646_10017573
517 Ga0207646_10081007
518 Ga0207646_10123244
519 Ga0207646_10376755
520 Ga0207694_10282426
521 Ga0207700_10001888
522 Ga0207700_10009361
523 Ga0207664_10004390
524 Ga0207664_10043729
525 Ga0207664_10260093
526 Ga0207709_10010214
527 Ga0207665_10007696
528 Ga0207665_10023952
529 Ga0207661_10000632
530 Ga0207661_10043056
531 Ga0207661_10280403
532 Ga0207679_10012626
533 Ga0207640_10054951
534 Ga0207708_10018728
535 Ga0207702_10031602
536 Ga0207702_10036377
537 Ga0207702_10339914
538 Ga0207648_10037110
539 Ga0207674_10000581
540 Ga0207674_10006744
541 Ga0207675_100125277
542 Ga0209371_1008134
543 Ga0209971_1002198
544 Ga0209998_10000391
545 Ga0209974_10001115
546 Ga0265337_1006701
547 Ga0265326_10005984
548 Ga0265334_10035500
549 Ga0265322_10022973
550 Ga0268256_1008344
551 Ga0265320_10002941
552 Ga0265325_10049547
553 Ga0265331_10043319
554 Ga0265316_10215911
555 Ga0316576_10064516
556 Ga0316577_10000589
557 Ga0316577_10078910
558 Ga0373941_0032746
559 Ga0373941_0042908
560 Ga0316574_0133215
561 Ga0316574_0250381
562 Ga0373931_0132104
563 Ga0373927_0000098
564 Ga0373937_0260985
565 Ga0316584_0024484
566 Ga0316584_0099902
567 Ga0436360_0566091
568 Ga0436360_1230664
569 Ga0436361_0859037
570 Ga0436363_0461132
571 Ga0436363_1222811
572 Ga0436362_0326461
573 Ga0436362_0758423
574 Ga0436362_1046013
575 Ga0451800_1624553
576 Ga0451853_1162128
577 Ga0439441_000995
578 Ga0450923_000716
579 Ga0466969_0025985
580 Ga0453683_0007044
581 Ga0466963_0344489
582 Ga0466957_0032836
583 Ga0466957_0042539
584 Ga0466959_0009083
585 Ga0451576_0079091
586 Ga0466958_0035045
587 Ga0495664_0261454
588 Ga0496102_0003750
589 Ga0496104_0171279
590 Ga0496108_0143054
591 Ga0496109_0119815
592 Ga0496112_0060747
593 Ga0496112_0072942
594 Ga0496116_0025421
595 Ga0496117_0000017
596 Ga0496118_0000018
597 Ga0496124_0134181
598 Ga0501037_0001151
599 Ga0501037_0199578
600 Ga0501038_0109479
601 Ga0501040_0144483
602 Ga0501041_0115990
603 Ga0501042_0114617
604 Ga0501042_0308252
605 Ga0501047_0221552
606 Ga0501068_0048460
607 Ga0501070_0178247
608 Ga0501071_0037221
609 Ga0501071_0199638
610 Ga0501072_0037938
611 Ga0501072_0074467
612 Ga0501072_0126057
613 Ga0501074_0059704
614 Ga0501075_0052508
615 Ga0501075_0123562
616 Ga0501076_0020942
617 Ga0501076_0072229
618 Ga0501076_0159711
619 Ga0501076_0473777
620 Ga0501077_0005863
621 Ga0501077_0108458
622 Ga0501077_0204297
623 Ga0501079_0008969
624 Ga0501079_0053903
625 Ga0501080_0021513
626 Ga0501080_0235579
627 Ga0501044_0007673
628 nmdc:mga05p37_198633_c1
629 nmdc:mga05p37_3653_c1
630 nmdc:mga05p37_42607_c1
631 nmdc:mga05p37_480805_c1
632 nmdc:mga05p37_61663_c1
633 nmdc:mga09592_5424_c1
634 nmdc:mga06r32_64920_c1
635 nmdc:mga0n895_26205_c1
636 nmdc:mga0n895_36874_c1
637 nmdc:mga0rr50_16774_c1
638 nmdc:mga0rr50_24466_c1
639 nmdc:mga0rr50_47282_c1
640 nmdc:mga08x19_22225_c1
641 nmdc:mga08x19_24343_c1
642 nmdc:mga08x19_360379_c1
643 nmdc:mga0a205_30622_c1
644 Ga0501084_0123824
645 Ga0501082_0022480
646 Ga0501082_0102099
647 Ga0501082_0134956
648 Ga0530510_0110791
649 Ga0530510_0115290
650 2566036101
651 2857467353
652 2857592235

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01063

Aminotran_4

Amino-transferase class IV

75

307

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6thq-assembly1.cif.gz_A crystal structure of branched-chain aminotransferase from thermophilic archaea thermoproteus uzoniensis with norvaline 0.9583 18 323
3u0g-assembly2.cif.gz_B crystal structure of branched-chain amino acid aminotransferase from burkholderia pseudomallei 0.955 20 321
2ej2-assembly1.cif.gz_A crystal structure of t.th.hb8 branched-chain amino acid aminotransferase complexed with n-(5'-phosphopyridoxyl)-l-glutamate 0.9538 18 323
1wrv-assembly1.cif.gz_C crystal structure of t.th.hb8 branched-chain amino acid aminotransferase 0.9532 18 323
6thq-assembly1.cif.gz_A crystal structure of branched-chain aminotransferase from thermophilic archaea thermoproteus uzoniensis with norvaline 0.952 18 323
ID Description Score Start End Superfamily
6gkrB02 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.9698 153 310 3.20.10.10
3u0gF02 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.9639 154 310 3.20.10.10
6h65B02 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.9639 153 311 3.20.10.10
af_P0AB80_137_302_3.30.470.10 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.9555 151 311 3.30.470.10
5mr0A02 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.9505 153 307 3.20.10.10
ID Description Score Start End GO Terms
AF-A0A3D2SHC0-F1-model_v4 branched-chain-amino-acid transaminase (EC 2.6.1.42) 0.9904 174 287 GO:0004084
GO:0005829
GO:0006532
GO:0009098
GO:0009099
AF-A0A4U9D3I1-F1-model_v4 branched-chain-amino-acid transaminase (EC 2.6.1.42) 0.9824 158 272 GO:0005829
GO:0006532
GO:0009098
GO:0009099
GO:0052655
GO:0052656
AF-A0A3D2SHC0-F1-model_v4 branched-chain-amino-acid transaminase (EC 2.6.1.42) 0.9818 174 287 GO:0004084
GO:0005829
GO:0006532
GO:0009098
GO:0009099
AF-A0A2R6AU00-F1-model_v4 Branched-chain amino acid aminotransferase 0.9816 179 290 GO:0008483
GO:0008652
GO:0009082
AF-A0A484VLA7-F1-model_v4 branched-chain-amino-acid transaminase (EC 2.6.1.42) 0.9808 22 323 GO:0004084
GO:0009097
GO:0009098
GO:0009099

Map