F408535

General Info

Members Datasets Scaffolds Average Seq Length
326 177 652 237

Family's Representative Sequence

Representative Sequence 3300049587|Ga0501071_0444768|Ga0501071_0444768_215_967
Length 250
Sequence LTIGPVLRTVLGMPLQPVTRRSVPDEVFDQLVAEVTGGGLGPGETLPSERRLAEVLGVSRPAVREALQRLATAGLVDVRQGGATTVRDFRRLGGLDLLPRLLVVGGELDLAVARSILEARLHVGPKVAELAARRAGAALEQELGGAVDALAAATDGVRRQHLALAFWDLVVAGADSITFRLMFNSMRAAYEPVIEALAVVMADEVDRVEAYAALTVAIVDGDAALAREVAHDLLSVATTTLTGAIDALER

Samples

Sample ID Description Type Environment
1 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
32 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
72 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
84 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
85 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
86 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
87 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
88 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
89 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
94 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
104 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
112 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
128 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
129 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
130 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
140 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
143 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
144 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
148 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
151 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
152 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
153 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
154 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
157 2643221561 Nocardioides sp. Root151 Isolate Unclassified
158 2643221576 Nocardioides sp. Root614 Isolate Unclassified
159 2643221590 Nocardioides sp. Root682 Isolate Unclassified
160 2643221620 Nocardioides sp. Root240 Isolate Unclassified
161 2643221641 Nocardioides sp. Root122 Isolate Unclassified
162 2643221696 Nocardioides sp. Root140 Isolate Unclassified
163 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
164 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
165 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
166 2738541305 Nocardioides sp. CF167 Isolate Unclassified
167 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
168 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
169 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
170 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
171 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
172 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
173 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
174 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
175 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
176 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
177 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.56
Metatranscriptomes 0
Isolates 6.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.94
Nodule 0.31
Rhizoplane 12.88
Rhizosphere 50.61
Stem 0
Stem Tuber 0
Unclassified 0.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501071_0444768 3300049587 Bacteria 992
2 Ga0070658_10143539 3300005327 Bacteria 1995
3 Ga0070683_100017357 3300005329 Bacteria 6362
4 Ga0070670_100546333 3300005331 Bacteria 1033
5 Ga0070666_10071198 3300005335 Bacteria 2366
6 Ga0070682_100285476 3300005337 Bacteria 1205
7 Ga0070682_100635136 3300005337 Unclassified 848
8 Ga0068868_100573214 3300005338 Bacteria 997
9 Ga0070660_100060999 3300005339 Bacteria 2928
10 Ga0070668_100452621 3300005347 Bacteria 1104
11 Ga0070669_100012642 3300005353 Bacteria 5991
12 Ga0070671_100024222 3300005355 Bacteria 4968
13 Ga0070659_100310968 3300005366 Bacteria 1316
14 Ga0070667_100000075 3300005367 Bacteria 120953
15 Ga0070667_100000871 3300005367 Bacteria 28019
16 Ga0070667_100022228 3300005367 Bacteria 5262
17 Ga0070714_100082713 3300005435 Bacteria 2797
18 Ga0070663_100487163 3300005455 Bacteria 1022
19 Ga0070684_100031603 3300005535 Bacteria 4508
20 Ga0070665_100003369 3300005548 Bacteria 17094
21 Ga0070665_100006722 3300005548 Bacteria 11687
22 Ga0070665_100035762 3300005548 Bacteria 4996
23 Ga0070702_100123513 3300005615 Bacteria 1624
24 Ga0070702_100154125 3300005615 Bacteria 1478
25 Ga0068852_100138748 3300005616 Bacteria 2248
26 Ga0068859_100013328 3300005617 Bacteria 8247
27 Ga0068859_100093350 3300005617 Bacteria 3061
28 Ga0068864_100155405 3300005618 Bacteria 2076
29 Ga0068864_100172061 3300005618 Bacteria 1975
30 Ga0068863_100003676 3300005841 Bacteria 15149
31 Ga0068863_100156680 3300005841 Bacteria 2180
32 Ga0068858_100132828 3300005842 Bacteria 2335
33 Ga0068858_100222835 3300005842 Bacteria 1787
34 Ga0068860_100000025 3300005843 Bacteria 271553
35 Ga0068860_100211261 3300005843 Bacteria 1882
36 Ga0068862_100000003 3300005844 Bacteria 369793
37 Ga0081455_10083856 3300005937 Bacteria 2603
38 Ga0081455_10157770 3300005937 Bacteria 1742
39 Ga0070717_10081448 3300006028 Bacteria 2718
40 Ga0075365_10010801 3300006038 Bacteria 5338
41 Ga0075365_10012101 3300006038 Bacteria 5108
42 Ga0075365_10055912 3300006038 Bacteria 2622
43 Ga0075365_10075390 3300006038 Bacteria 2276
44 Ga0075365_10091157 3300006038 Bacteria 2076
45 Ga0075365_10109797 3300006038 Bacteria 1895
46 Ga0075365_10120920 3300006038 Bacteria 1806
47 Ga0075365_10187524 3300006038 Bacteria 1447
48 Ga0075363_100000540 3300006048 Bacteria 12242
49 Ga0075363_100000803 3300006048 Bacteria 10847
50 Ga0075363_100021715 3300006048 Bacteria 3238
51 Ga0075363_100025381 3300006048 Bacteria 3022
52 Ga0075363_100034878 3300006048 Bacteria 2629
53 Ga0075364_10012572 3300006051 Bacteria 5184
54 Ga0075364_10024097 3300006051 Bacteria 3860
55 Ga0075364_10045756 3300006051 Bacteria 2848
56 Ga0075364_10057133 3300006051 Bacteria 2555
57 Ga0075364_10079656 3300006051 Bacteria 2164
58 Ga0075432_10031282 3300006058 Bacteria 1842
59 Ga0075362_10075913 3300006177 Unclassified 1542
60 Ga0075362_10135788 3300006177 Bacteria 1173
61 Ga0075367_10000700 3300006178 Bacteria 12914
62 Ga0075367_10010695 3300006178 Bacteria 4830
63 Ga0075367_10016427 3300006178 Bacteria 4042
64 Ga0075367_10019294 3300006178 Bacteria 3779
65 Ga0075367_10072160 3300006178 Bacteria 2078
66 Ga0075367_10104142 3300006178 Bacteria 1737
67 Ga0075369_10016854 3300006186 Bacteria 2955
68 Ga0075369_10025596 3300006186 Bacteria 2455
69 Ga0075369_10029776 3300006186 Bacteria 2296
70 Ga0075370_10004167 3300006353 Bacteria 6974
71 Ga0075370_10016307 3300006353 Bacteria 3996
72 Ga0075370_10027175 3300006353 Bacteria 3174
73 Ga0075370_10076598 3300006353 Bacteria 1918
74 Ga0068871_100389620 3300006358 Bacteria 1239
75 Ga0075434_100701791 3300006871 Bacteria 1029
76 Ga0075429_100155992 3300006880 Bacteria 1999
77 Ga0068865_100114588 3300006881 Bacteria 1994
78 Ga0068865_100134376 3300006881 Bacteria 1857
79 Ga0068865_100632387 3300006881 Bacteria 908
80 Ga0097620_100013328 3300006931 Bacteria 8247
81 Ga0097620_100093347 3300006931 Bacteria 3061
82 Ga0105240_10262665 3300009093 Bacteria 1991
83 Ga0105245_10039328 3300009098 Bacteria 4210
84 Ga0105245_10077484 3300009098 Bacteria 3031
85 Ga0105247_10000010 3300009101 Bacteria 302475
86 Ga0105247_10565068 3300009101 Bacteria 838
87 Ga0105243_10101044 3300009148 Bacteria 2394
88 Ga0105248_10000145 3300009177 Bacteria 81917
89 Ga0105248_10020885 3300009177 Bacteria 7257
90 Ga0105248_11199461 3300009177 Bacteria 858
91 Ga0105237_10002379 3300009545 Bacteria 23343
92 Ga0105249_10000010 3300009553 Bacteria 306939
93 Ga0105239_10017064 3300010375 Bacteria 8026
94 Ga0105239_10023722 3300010375 Bacteria 6754
95 Ga0163162_10052827 3300013306 Bacteria 4082
96 Ga0163162_10124144 3300013306 Bacteria 2687
97 Ga0157372_10023613 3300013307 Bacteria 6671
98 Ga0157372_10533077 3300013307 Bacteria 1369
99 Ga0157375_10037618 3300013308 Bacteria 4638
100 Ga0163163_10032925 3300014325 Bacteria 5009
101 Ga0163163_10661609 3300014325 Bacteria 1108
102 Ga0157379_10021068 3300014968 Bacteria 5769
103 Ga0213875_10023770 3300021388 Bacteria 2925
104 Ga0207710_10000028 3300025900 Bacteria 304525
105 Ga0207695_10433440 3300025913 Bacteria 1198
106 Ga0207671_10003379 3300025914 Bacteria 15974
107 Ga0207681_10000937 3300025923 Bacteria 18978
108 Ga0207650_10156427 3300025925 Bacteria 1803
109 Ga0207664_10194160 3300025929 Bacteria 1749
110 Ga0207644_10002486 3300025931 Bacteria 11865
111 Ga0207711_10000069 3300025941 Bacteria 115038
112 Ga0207711_10896848 3300025941 Bacteria 824
113 Ga0207712_10000016 3300025961 Bacteria 343014
114 Ga0207658_10000538 3300025986 Bacteria 34399
115 Ga0207658_10003233 3300025986 Bacteria 11578
116 Ga0207658_10010252 3300025986 Bacteria 6366
117 Ga0207703_10042200 3300026035 Bacteria 3659
118 Ga0207702_10217724 3300026078 Bacteria 1778
119 Ga0207641_10002060 3300026088 Bacteria 19094
120 Ga0207641_10013883 3300026088 Bacteria 6606
121 Ga0268266_10011385 3300028379 Bacteria 7735
122 Ga0268266_10013580 3300028379 Bacteria 7015
123 Ga0268265_10000010 3300028380 Bacteria 370129
124 Ga0268264_10000053 3300028381 Bacteria 320368
125 Ga0307512_10012256 3300030522 Bacteria 8104
126 Ga0307405_10096819 3300031731 Bacteria 1969
127 Ga0307413_10022326 3300031824 Bacteria 3408
128 Ga0326468_10001100 3300031889 Bacteria 2506
129 Ga0307412_10171657 3300031911 Bacteria 1622
130 Ga0307409_101074293 3300031995 Bacteria 825
131 Ga0307415_100388674 3300032126 Bacteria 1187
132 Ga0373940_0062315 3300035088 Bacteria 1069
133 Ga0373927_0023872 3300035695 Bacteria 4001
134 Ga0395898_0127219 3300037466 Bacteria 2441
135 Ga0436364_0348927 3300037853 Bacteria 8460
136 Ga0436365_0813380 3300039437 Bacteria 5188
137 Ga0436365_1650081 3300039437 Bacteria 1830
138 Ga0436363_0139639 3300039450 Bacteria 4928
139 Ga0436363_1157263 3300039450 Bacteria 1067
140 Ga0436363_1461465 3300039450 Bacteria 2841
141 Ga0439447_046834 3300041407 Bacteria 1040
142 Ga0439465_0010660 3300041413 Bacteria 2884
143 Ga0439465_0076349 3300041413 Bacteria 1129
144 Ga0439431_0021408 3300041997 Bacteria 1552
145 Ga0439445_0006857 3300042004 Bacteria 2629
146 Ga0439446_0077000 3300042156 Bacteria 1027
147 Ga0439434_0017476 3300042435 Bacteria 2146
148 Ga0439434_0055313 3300042435 Bacteria 1235
149 Ga0466965_0014430 3300044683 Bacteria 3739
150 Ga0466965_0299935 3300044683 Bacteria 871
151 Ga0466965_0313225 3300044683 Bacteria 854
152 Ga0466961_0077150 3300044693 Bacteria 2111
153 Ga0466961_0106982 3300044693 Bacteria 1761
154 Ga0466963_0003755 3300044694 Bacteria 8746
155 Ga0466963_0043289 3300044694 Bacteria 2960
156 Ga0466963_0198770 3300044694 Bacteria 1402
157 Ga0466964_0068462 3300044706 Bacteria 1495
158 Ga0466964_0126109 3300044706 Bacteria 1160
159 Ga0466971_0034141 3300044719 Bacteria 2280
160 Ga0466971_0044264 3300044719 Bacteria 1999
161 Ga0466971_0047240 3300044719 Bacteria 1935
162 Ga0466970_0002892 3300044765 Bacteria 8316
163 Ga0466970_0013969 3300044765 Bacteria 4120
164 Ga0466957_0005203 3300044842 Bacteria 7277
165 Ga0466957_0026433 3300044842 Bacteria 3443
166 Ga0466957_0185917 3300044842 Bacteria 1359
167 Ga0466960_0013946 3300044901 Bacteria 3426
168 Ga0466960_0036670 3300044901 Bacteria 2297
169 Ga0466960_0062603 3300044901 Bacteria 1829
170 Ga0466960_0148464 3300044901 Bacteria 1250
171 Ga0466960_0159862 3300044901 Bacteria 1209
172 Ga0466959_0028095 3300045049 Bacteria 4172
173 Ga0466958_0001581 3300045836 Bacteria 10942
174 Ga0466958_0009214 3300045836 Bacteria 5493
175 Ga0466958_0019225 3300045836 Bacteria 3975
176 Ga0466958_0095771 3300045836 Bacteria 1840
177 Ga0466967_0002924 3300045976 Bacteria 10899
178 Ga0466967_0005984 3300045976 Bacteria 8541
179 Ga0466967_0009117 3300045976 Bacteria 7338
180 Ga0466967_0047081 3300045976 Bacteria 3758
181 Ga0466967_0119835 3300045976 Bacteria 2429
182 Ga0466967_0898352 3300045976 Bacteria 881
183 Ga0495629_0272657 3300046459 Bacteria 1162
184 Ga0495638_0041120 3300046460 Bacteria 2926
185 Ga0495658_0519723 3300046683 Bacteria 762
186 Ga0495672_0110561 3300047320 Bacteria 1476
187 Ga0496100_0000043 3300048903 Bacteria 89692
188 Ga0496100_0014360 3300048903 Bacteria 4597
189 Ga0496100_0040009 3300048903 Bacteria 2980
190 Ga0496101_0000066 3300048904 Bacteria 122196
191 Ga0496101_0000374 3300048904 Bacteria 29694
192 Ga0496101_0046724 3300048904 Bacteria 3106
193 Ga0496101_0594588 3300048904 Bacteria 875
194 Ga0496102_0000035 3300048905 Bacteria 213557
195 Ga0496102_0000070 3300048905 Bacteria 155087
196 Ga0496102_0005848 3300048905 Bacteria 10466
197 Ga0496102_0118006 3300048905 Bacteria 2476
198 Ga0496103_0000028 3300048906 Bacteria 213660
199 Ga0496103_0001916 3300048906 Bacteria 13509
200 Ga0496103_0025636 3300048906 Bacteria 3565
201 Ga0496103_0158837 3300048906 Bacteria 1450
202 Ga0496104_0031937 3300048907 Bacteria 4899
203 Ga0496105_0010493 3300048908 Bacteria 7286
204 Ga0496106_0002482 3300048909 Bacteria 13750
205 Ga0496106_0045507 3300048909 Bacteria 3296
206 Ga0496106_0387281 3300048909 Bacteria 1123
207 Ga0496107_0001269 3300048910 Bacteria 15449
208 Ga0496107_0031166 3300048910 Bacteria 3803
209 Ga0496107_0117507 3300048910 Bacteria 1958
210 Ga0496107_0372128 3300048910 Bacteria 1063
211 Ga0496108_0010042 3300048911 Bacteria 7677
212 Ga0496108_0322329 3300048911 Bacteria 1347
213 Ga0496109_0000616 3300048912 Bacteria 29646
214 Ga0496109_0062944 3300048912 Bacteria 3393
215 Ga0496109_0570258 3300048912 Bacteria 1067
216 Ga0496109_0787475 3300048912 Bacteria 889
217 Ga0496110_0002402 3300048913 Bacteria 14025
218 Ga0496110_0039667 3300048913 Bacteria 4101
219 Ga0496111_0078490 3300048914 Bacteria 2408
220 Ga0496111_0194142 3300048914 Bacteria 1509
221 Ga0496112_0057295 3300048915 Bacteria 3836
222 Ga0496113_0391160 3300048916 Bacteria 1116
223 Ga0496113_0446937 3300048916 Bacteria 1038
224 Ga0496114_0000465 3300048917 Bacteria 29699
225 Ga0496114_0046488 3300048917 Bacteria 3607
226 Ga0496114_0521529 3300048917 Bacteria 1051
227 Ga0496115_0002320 3300048918 Bacteria 13636
228 Ga0496115_0369703 3300048918 Bacteria 1167
229 Ga0496116_0000090 3300048919 Bacteria 212651
230 Ga0496116_0005295 3300048919 Bacteria 12030
231 Ga0496116_0059522 3300048919 Bacteria 2483
232 Ga0496117_0000051 3300048920 Bacteria 285716
233 Ga0496117_0005561 3300048920 Bacteria 13188
234 Ga0496117_0042685 3300048920 Bacteria 3306
235 Ga0496117_0054775 3300048920 Bacteria 2791
236 Ga0496118_0000043 3300048921 Bacteria 285716
237 Ga0496118_0000903 3300048921 Bacteria 46469
238 Ga0496118_0001705 3300048921 Bacteria 32141
239 Ga0496119_0000321 3300048922 Bacteria 67218
240 Ga0496119_0009623 3300048922 Bacteria 8246
241 Ga0496120_0000915 3300048923 Bacteria 41046
242 Ga0496120_0003647 3300048923 Bacteria 13796
243 Ga0496121_0000048 3300048924 Bacteria 330242
244 Ga0496121_0000080 3300048924 Bacteria 230195
245 Ga0496121_0022723 3300048924 Bacteria 6069
246 Ga0496121_0163698 3300048924 Bacteria 1624
247 Ga0496122_0000301 3300048925 Bacteria 109636
248 Ga0496123_0015443 3300048926 Bacteria 6263
249 Ga0496123_0043719 3300048926 Bacteria 3072
250 Ga0496124_0001160 3300048927 Bacteria 41305
251 Ga0496125_0000037 3300048928 Bacteria 330242
252 Ga0496125_0036623 3300048928 Bacteria 4279
253 Ga0496126_0000046 3300048929 Bacteria 330242
254 Ga0496126_0001200 3300048929 Bacteria 42278
255 Ga0496126_0004801 3300048929 Bacteria 15880
256 Ga0496126_0010648 3300048929 Bacteria 9617
257 Ga0501034_0195501 3300049571 Bacteria 1983
258 Ga0501034_0902763 3300049571 Bacteria 771
259 Ga0501042_0309279 3300049578 Bacteria 1142
260 Ga0501047_0637717 3300049581 Bacteria 885
261 Ga0501069_0035926 3300049585 Bacteria 2731
262 Ga0501069_0181419 3300049585 Bacteria 1217
263 Ga0501070_0021116 3300049586 Bacteria 5464
264 Ga0501070_0414617 3300049586 Bacteria 1088
265 Ga0501070_0654701 3300049586 Bacteria 834
266 Ga0501070_0666938 3300049586 Bacteria 825
267 Ga0501073_0050423 3300049589 Bacteria 2917
268 Ga0501044_0037573 3300049823 Bacteria 5061
269 nmdc:mga03n38_16565_c1 3300050490 Bacteria 1961
270 nmdc:mga03n38_30024_c1 3300050490 Bacteria 2282
271 nmdc:mga03n38_308566_c1 3300050490 Bacteria 851
272 nmdc:mga03n38_4158_c1 3300050490 Bacteria 4755
273 nmdc:mga03n38_91237_c1 3300050490 Bacteria 1451
274 nmdc:mga00v17_23296_c1 3300050491 Bacteria 3581
275 nmdc:mga00v17_49257_c1 3300050491 Bacteria 2555
276 nmdc:mga00v17_55010_c1 3300050491 Bacteria 2429
277 nmdc:mga0yw44_139751_c1 3300050492 Bacteria 1573
278 nmdc:mga0yw44_142115_c1 3300050492 Bacteria 1561
279 nmdc:mga0yw44_3091_c1 3300050492 Bacteria 7292
280 nmdc:mga0yw44_5808_c1 3300050492 Bacteria 5885
281 nmdc:mga0yw44_89362_c1 3300050492 Bacteria 1944
282 nmdc:mga0k408_54462_c1 3300050493 Bacteria 2318
283 nmdc:mga06z11_13709_c1 3300050494 Bacteria 3568
284 nmdc:mga06z11_51793_c1 3300050494 Bacteria 2103
285 nmdc:mga06z11_74349_c1 3300050494 Bacteria 1806
286 nmdc:mga06z11_91198_c1 3300050494 Bacteria 1654
287 nmdc:mga07m45_42504_c1 3300050496 Bacteria 2548
288 nmdc:mga07m45_76991_c1 3300050496 Bacteria 1902
289 nmdc:mga07m45_7772_c2 3300050496 Bacteria 4919
290 nmdc:mga07m45_9154_c1 3300050496 Bacteria 1541
291 nmdc:mga09592_29660_c1 3300050508 Bacteria 4548
292 nmdc:mga08y16_731074_c1 3300050511 Bacteria 987
293 nmdc:mga0sz30_30123_c1 3300050516 Bacteria 2241
294 nmdc:mga0sz30_41312_c1 3300050516 Bacteria 1938
295 Ga0500635_0159154 3300053080 Bacteria 865
296 Ga0500595_061196 3300053119 Bacteria 1137
297 Ga0500652_003964 3300053131 Bacteria 4527
298 Ga0500559_0268395 3300053136 Bacteria 803
299 Ga0500577_0007246 3300053142 Bacteria 3101
300 Ga0500589_010191 3300053147 Bacteria 4007
301 Ga0500645_000006 3300053730 Bacteria 276677
302 Ga0500645_009795 3300053730 Bacteria 3205
303 Ga0501082_0078952 3300060353 Bacteria 2839
304 Ga0466962_0014226 3300061719 Bacteria 3834
305 Ga0466962_0216468 3300061719 Bacteria 937
306 2643827617 2643221561 Bacteria 4984412
307 2643891041 2643221576 Bacteria 5214352
308 2643960097 2643221590 Bacteria 5214697
309 2644118015 2643221620 Bacteria 5134593
310 2644231745 2643221641 Bacteria 4490190
311 2644534869 2643221696 Bacteria 5431823
312 2644634107 2643221715 Bacteria 6671032
313 2738663887 2738541264 Bacteria 5935393
314 2738704371 2738541274 Bacteria 6909446
315 2738868777 2738541305 Bacteria 4910150
316 2739143022 2738541356 Bacteria 5935017
317 2739331146 2738543028 Bacteria 6917070
318 2744955078 2744054611 Bacteria 5611514
319 2795782399 2795385470 Bacteria 8317180
320 2842139842 2842134933 Bacteria 5847019
321 2842890599 2842888712 Bacteria 4279094
322 2899365070 2899359706 Bacteria 10940472
323 2902799516 2902799365 Bacteria 5419524
324 2902811731 2902810491 Bacteria 6794147
325 2919717488 2919713450 Bacteria 7431245
326 2929215934 2929212328 Bacteria 7708288
327 Ga0501071_0444768
328 Ga0070658_10143539
329 Ga0070683_100017357
330 Ga0070670_100546333
331 Ga0070666_10071198
332 Ga0070682_100285476
333 Ga0070682_100635136
334 Ga0068868_100573214
335 Ga0070660_100060999
336 Ga0070668_100452621
337 Ga0070669_100012642
338 Ga0070671_100024222
339 Ga0070659_100310968
340 Ga0070667_100000075
341 Ga0070667_100000871
342 Ga0070667_100022228
343 Ga0070714_100082713
344 Ga0070663_100487163
345 Ga0070684_100031603
346 Ga0070665_100003369
347 Ga0070665_100006722
348 Ga0070665_100035762
349 Ga0070702_100123513
350 Ga0070702_100154125
351 Ga0068852_100138748
352 Ga0068859_100013328
353 Ga0068859_100093350
354 Ga0068864_100155405
355 Ga0068864_100172061
356 Ga0068863_100003676
357 Ga0068863_100156680
358 Ga0068858_100132828
359 Ga0068858_100222835
360 Ga0068860_100000025
361 Ga0068860_100211261
362 Ga0068862_100000003
363 Ga0081455_10083856
364 Ga0081455_10157770
365 Ga0070717_10081448
366 Ga0075365_10010801
367 Ga0075365_10012101
368 Ga0075365_10055912
369 Ga0075365_10075390
370 Ga0075365_10091157
371 Ga0075365_10109797
372 Ga0075365_10120920
373 Ga0075365_10187524
374 Ga0075363_100000540
375 Ga0075363_100000803
376 Ga0075363_100021715
377 Ga0075363_100025381
378 Ga0075363_100034878
379 Ga0075364_10012572
380 Ga0075364_10024097
381 Ga0075364_10045756
382 Ga0075364_10057133
383 Ga0075364_10079656
384 Ga0075432_10031282
385 Ga0075362_10075913
386 Ga0075362_10135788
387 Ga0075367_10000700
388 Ga0075367_10010695
389 Ga0075367_10016427
390 Ga0075367_10019294
391 Ga0075367_10072160
392 Ga0075367_10104142
393 Ga0075369_10016854
394 Ga0075369_10025596
395 Ga0075369_10029776
396 Ga0075370_10004167
397 Ga0075370_10016307
398 Ga0075370_10027175
399 Ga0075370_10076598
400 Ga0068871_100389620
401 Ga0075434_100701791
402 Ga0075429_100155992
403 Ga0068865_100114588
404 Ga0068865_100134376
405 Ga0068865_100632387
406 Ga0097620_100013328
407 Ga0097620_100093347
408 Ga0105240_10262665
409 Ga0105245_10039328
410 Ga0105245_10077484
411 Ga0105247_10000010
412 Ga0105247_10565068
413 Ga0105243_10101044
414 Ga0105248_10000145
415 Ga0105248_10020885
416 Ga0105248_11199461
417 Ga0105237_10002379
418 Ga0105249_10000010
419 Ga0105239_10017064
420 Ga0105239_10023722
421 Ga0163162_10052827
422 Ga0163162_10124144
423 Ga0157372_10023613
424 Ga0157372_10533077
425 Ga0157375_10037618
426 Ga0163163_10032925
427 Ga0163163_10661609
428 Ga0157379_10021068
429 Ga0213875_10023770
430 Ga0207710_10000028
431 Ga0207695_10433440
432 Ga0207671_10003379
433 Ga0207681_10000937
434 Ga0207650_10156427
435 Ga0207664_10194160
436 Ga0207644_10002486
437 Ga0207711_10000069
438 Ga0207711_10896848
439 Ga0207712_10000016
440 Ga0207658_10000538
441 Ga0207658_10003233
442 Ga0207658_10010252
443 Ga0207703_10042200
444 Ga0207702_10217724
445 Ga0207641_10002060
446 Ga0207641_10013883
447 Ga0268266_10011385
448 Ga0268266_10013580
449 Ga0268265_10000010
450 Ga0268264_10000053
451 Ga0307512_10012256
452 Ga0307405_10096819
453 Ga0307413_10022326
454 Ga0326468_10001100
455 Ga0307412_10171657
456 Ga0307409_101074293
457 Ga0307415_100388674
458 Ga0373940_0062315
459 Ga0373927_0023872
460 Ga0395898_0127219
461 Ga0436364_0348927
462 Ga0436365_0813380
463 Ga0436365_1650081
464 Ga0436363_0139639
465 Ga0436363_1157263
466 Ga0436363_1461465
467 Ga0439447_046834
468 Ga0439465_0010660
469 Ga0439465_0076349
470 Ga0439431_0021408
471 Ga0439445_0006857
472 Ga0439446_0077000
473 Ga0439434_0017476
474 Ga0439434_0055313
475 Ga0466965_0014430
476 Ga0466965_0299935
477 Ga0466965_0313225
478 Ga0466961_0077150
479 Ga0466961_0106982
480 Ga0466963_0003755
481 Ga0466963_0043289
482 Ga0466963_0198770
483 Ga0466964_0068462
484 Ga0466964_0126109
485 Ga0466971_0034141
486 Ga0466971_0044264
487 Ga0466971_0047240
488 Ga0466970_0002892
489 Ga0466970_0013969
490 Ga0466957_0005203
491 Ga0466957_0026433
492 Ga0466957_0185917
493 Ga0466960_0013946
494 Ga0466960_0036670
495 Ga0466960_0062603
496 Ga0466960_0148464
497 Ga0466960_0159862
498 Ga0466959_0028095
499 Ga0466958_0001581
500 Ga0466958_0009214
501 Ga0466958_0019225
502 Ga0466958_0095771
503 Ga0466967_0002924
504 Ga0466967_0005984
505 Ga0466967_0009117
506 Ga0466967_0047081
507 Ga0466967_0119835
508 Ga0466967_0898352
509 Ga0495629_0272657
510 Ga0495638_0041120
511 Ga0495658_0519723
512 Ga0495672_0110561
513 Ga0496100_0000043
514 Ga0496100_0014360
515 Ga0496100_0040009
516 Ga0496101_0000066
517 Ga0496101_0000374
518 Ga0496101_0046724
519 Ga0496101_0594588
520 Ga0496102_0000035
521 Ga0496102_0000070
522 Ga0496102_0005848
523 Ga0496102_0118006
524 Ga0496103_0000028
525 Ga0496103_0001916
526 Ga0496103_0025636
527 Ga0496103_0158837
528 Ga0496104_0031937
529 Ga0496105_0010493
530 Ga0496106_0002482
531 Ga0496106_0045507
532 Ga0496106_0387281
533 Ga0496107_0001269
534 Ga0496107_0031166
535 Ga0496107_0117507
536 Ga0496107_0372128
537 Ga0496108_0010042
538 Ga0496108_0322329
539 Ga0496109_0000616
540 Ga0496109_0062944
541 Ga0496109_0570258
542 Ga0496109_0787475
543 Ga0496110_0002402
544 Ga0496110_0039667
545 Ga0496111_0078490
546 Ga0496111_0194142
547 Ga0496112_0057295
548 Ga0496113_0391160
549 Ga0496113_0446937
550 Ga0496114_0000465
551 Ga0496114_0046488
552 Ga0496114_0521529
553 Ga0496115_0002320
554 Ga0496115_0369703
555 Ga0496116_0000090
556 Ga0496116_0005295
557 Ga0496116_0059522
558 Ga0496117_0000051
559 Ga0496117_0005561
560 Ga0496117_0042685
561 Ga0496117_0054775
562 Ga0496118_0000043
563 Ga0496118_0000903
564 Ga0496118_0001705
565 Ga0496119_0000321
566 Ga0496119_0009623
567 Ga0496120_0000915
568 Ga0496120_0003647
569 Ga0496121_0000048
570 Ga0496121_0000080
571 Ga0496121_0022723
572 Ga0496121_0163698
573 Ga0496122_0000301
574 Ga0496123_0015443
575 Ga0496123_0043719
576 Ga0496124_0001160
577 Ga0496125_0000037
578 Ga0496125_0036623
579 Ga0496126_0000046
580 Ga0496126_0001200
581 Ga0496126_0004801
582 Ga0496126_0010648
583 Ga0501034_0195501
584 Ga0501034_0902763
585 Ga0501042_0309279
586 Ga0501047_0637717
587 Ga0501069_0035926
588 Ga0501069_0181419
589 Ga0501070_0021116
590 Ga0501070_0414617
591 Ga0501070_0654701
592 Ga0501070_0666938
593 Ga0501073_0050423
594 Ga0501044_0037573
595 nmdc:mga03n38_16565_c1
596 nmdc:mga03n38_30024_c1
597 nmdc:mga03n38_308566_c1
598 nmdc:mga03n38_4158_c1
599 nmdc:mga03n38_91237_c1
600 nmdc:mga00v17_23296_c1
601 nmdc:mga00v17_49257_c1
602 nmdc:mga00v17_55010_c1
603 nmdc:mga0yw44_139751_c1
604 nmdc:mga0yw44_142115_c1
605 nmdc:mga0yw44_3091_c1
606 nmdc:mga0yw44_5808_c1
607 nmdc:mga0yw44_89362_c1
608 nmdc:mga0k408_54462_c1
609 nmdc:mga06z11_13709_c1
610 nmdc:mga06z11_51793_c1
611 nmdc:mga06z11_74349_c1
612 nmdc:mga06z11_91198_c1
613 nmdc:mga07m45_42504_c1
614 nmdc:mga07m45_76991_c1
615 nmdc:mga07m45_7772_c2
616 nmdc:mga07m45_9154_c1
617 nmdc:mga09592_29660_c1
618 nmdc:mga08y16_731074_c1
619 nmdc:mga0sz30_30123_c1
620 nmdc:mga0sz30_41312_c1
621 Ga0500635_0159154
622 Ga0500595_061196
623 Ga0500652_003964
624 Ga0500559_0268395
625 Ga0500577_0007246
626 Ga0500589_010191
627 Ga0500645_000006
628 Ga0500645_009795
629 Ga0501082_0078952
630 Ga0466962_0014226
631 Ga0466962_0216468
632 2643827617
633 2643891041
634 2643960097
635 2644118015
636 2644231745
637 2644534869
638 2644634107
639 2738663887
640 2738704371
641 2738868777
642 2739143022
643 2739331146
644 2744955078
645 2795782399
646 2842139842
647 2842890599
648 2899365070
649 2902799516
650 2902811731
651 2919717488
652 2929215934

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

24

86

0.98

PF07729

FCD

FCD domain

115

235

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3eet-assembly2.cif.gz_B-3 crystal structure of putative gntr-family transcriptional regulator 0.962 12 76
3eet-assembly1.cif.gz_A-2 crystal structure of putative gntr-family transcriptional regulator 0.9457 9 76
2ek5-assembly4.cif.gz_C crystal structure of the transcriptional factor from c.glutamicum at 2.2 angstrom resolution 0.9272 10 77
2ek5-assembly4.cif.gz_C-3 crystal structure of the transcriptional factor from c.glutamicum at 2.2 angstrom resolution 0.9272 10 77
3edp-assembly1.cif.gz_A the crystal structure of the protein lin2111 (functionally unknown) from listeria innocua clip11262 0.9206 8 74
ID Description Score Start End Superfamily
af_P39389_1_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9676 12 76 1.10.10.10
af_P45544_5_80_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9657 12 76 1.10.10.10
af_P0ACM2_11_76_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9639 11 75 1.10.10.10
af_P9WMG7_15_85_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.962 11 76 1.10.10.10
af_P0A8W0_27_98_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9616 6 76 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A4R7IZ16-F1-model_v4 FCD domain-containing protein 0.9851 74 236 GO:0003677
AF-A0A4R7IZ16-F1-model_v4 FCD domain-containing protein 0.9675 74 236 GO:0003677
AF-A0A6N4UKA9-F1-model_v4 GntR family transcriptional regulator 0.9667 46 235 GO:0003677
AF-A0A7Y3DCH8-F1-model_v4 FadR family transcriptional regulator 0.9621 1 236 GO:0003677
GO:0003700
AF-A0A3G8JMR1-F1-model_v4 HTH-type transcriptional regulator Mce2R 0.9463 1 240 GO:0003677
GO:0003700

Map