F408453

General Info

Members Datasets Scaffolds Average Seq Length
326 219 652 344

Family's Representative Sequence

Representative Sequence 3300044693|Ga0466961_0102168|Ga0466961_0102168_196_1395
Length 399
Sequence MQPIARDGIASQSETPDRFWPRPHLPSVLRQAVDDAVGPRRARRPASRAEVLMYSRDGEDYFVVDAHIALWDARPENQRNVHGKQFIDCFYDYHRNLSPESETWGYEEYLYQGGERLMRDVFADGIVDHAIFQPARLAEFYHRGFGQTDEAFALAQAHPDKLTYNHYWDPRDGENGLDALRAAAERMHLKGVKLYTADWHGESRGWKLDDPMAYRYFELCRELGIRNIHIHKGPTIRPLDRDAFDVADVDHVASDFTDLAFVVEHVGLPRLEDFCWIATQEPNVYGGLAVAMPFIHTRPRYFAQIMGELVYWIGEDRILFSSDYALWTPRWLVERFVDFQIPEDMTEYAPLTTELKKKVLGLNAAALYDLPVPERLRLPDAGETETGPREPAAADLATV

Samples

Sample ID Description Type Environment
1 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
8 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
9 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
47 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
102 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
110 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
111 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
117 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
123 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
124 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
127 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
128 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
129 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
130 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
133 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
134 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
137 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
138 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
139 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
153 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
154 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
172 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
173 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
174 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
175 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
176 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
177 3300059646 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 42R_SW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
178 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
179 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
180 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
181 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
182 2527291627 Frankia casuarinae Thr Isolate Nodule
183 2527291629 Frankia sp. BMG5.23 Isolate Nodule
184 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
185 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
186 2576861822 Frankia sp. CeD Isolate Nodule
187 2582580736 Prauserella sp. Am3 Isolate Unclassified
188 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
189 2643221576 Nocardioides sp. Root614 Isolate Unclassified
190 2643221590 Nocardioides sp. Root682 Isolate Unclassified
191 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
192 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
193 2684623036 Frankia sp. CgIM4 Isolate Nodule
194 2710264753 Frankia sp. KB5 Isolate Nodule
195 2739367898 Nocardioides sp. CF479 Isolate Unclassified
196 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
197 2773857924 Frankia sp. CgIS1 Isolate Nodule
198 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
199 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
200 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
201 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
202 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
203 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
204 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
205 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
206 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
207 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
208 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
209 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
210 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
211 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
212 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
213 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
214 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
215 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
216 637000116 Frankia casuarinae CcI3 Isolate Nodule
217 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
218 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
219 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.74
Metatranscriptomes 1.53
Isolates 14.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.37
Nodule 3.68
Rhizoplane 13.5
Rhizosphere 67.79
Stem 0
Stem Tuber 0.61
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466961_0102168 3300044693 Bacteria 1806
2 LJQas_1003595 3300000549 Bacteria 2067
3 JGI24740J21852_10015033 3300001979 Bacteria 2836
4 JGI24739J22299_10007280 3300001989 Bacteria 4158
5 JGI24737J22298_10012672 3300001990 Bacteria 2748
6 JGI24735J21928_10019850 3300002067 Bacteria 2064
7 JGI24738J21930_10017384 3300002075 Bacteria 1512
8 JGI24742J22300_10005856 3300002244 Bacteria 2024
9 JGI25406J46586_10004403 3300003203 Bacteria 6559
10 rootL2_10139772 3300003322 Bacteria 3268
11 Ga0055540_1001074 3300003792 Bacteria 17386
12 Ga0055540_1004115 3300003792 Bacteria 6728
13 Ga0070683_100252084 3300005329 Bacteria 1679
14 Ga0068869_100025102 3300005334 Bacteria 4135
15 Ga0070692_10089283 3300005345 Bacteria 1672
16 Ga0070671_100058379 3300005355 Bacteria 3212
17 Ga0070674_100036871 3300005356 Bacteria 3286
18 Ga0070667_100000022 3300005367 Bacteria 204861
19 Ga0070667_100003273 3300005367 Bacteria 13841
20 Ga0070709_10100803 3300005434 Bacteria 1923
21 Ga0070710_10002375 3300005437 Bacteria 8911
22 Ga0070711_100022403 3300005439 Bacteria 4095
23 Ga0070705_100015102 3300005440 Bacteria 3984
24 Ga0070700_100028408 3300005441 Bacteria 3327
25 Ga0070678_100086136 3300005456 Bacteria 2396
26 Ga0070685_10119610 3300005466 Bacteria 1634
27 Ga0070707_100527527 3300005468 Bacteria 1143
28 Ga0068853_100018942 3300005539 Bacteria 5700
29 Ga0068853_100084744 3300005539 Bacteria 2777
30 Ga0070696_100043353 3300005546 Bacteria 3112
31 Ga0070665_100010185 3300005548 Bacteria 9510
32 Ga0068859_100002659 3300005617 Bacteria 18141
33 Ga0068861_100153828 3300005719 Bacteria 1890
34 Ga0068863_100000699 3300005841 Bacteria 33727
35 Ga0068863_100104918 3300005841 Bacteria 2689
36 Ga0068858_100387874 3300005842 Bacteria 1341
37 Ga0068860_100000038 3300005843 Bacteria 232936
38 Ga0068862_100000064 3300005844 Bacteria 124473
39 Ga0068862_100160515 3300005844 Bacteria 2006
40 Ga0068862_100315317 3300005844 Bacteria 1442
41 Ga0081455_10013674 3300005937 Bacteria 7994
42 Ga0081455_10014401 3300005937 Bacteria 7758
43 Ga0081455_10018415 3300005937 Bacteria 6654
44 Ga0081455_10069011 3300005937 Bacteria 2941
45 Ga0081538_10000202 3300005981 Bacteria 66057
46 Ga0081538_10035598 3300005981 Bacteria 3268
47 Ga0081539_10000911 3300005985 Bacteria 55934
48 Ga0081539_10001346 3300005985 Bacteria 42790
49 Ga0075365_10183627 3300006038 Bacteria 1463
50 Ga0070715_10006118 3300006163 Bacteria 4070
51 Ga0070716_100008886 3300006173 Bacteria 4995
52 Ga0070716_100062470 3300006173 Bacteria 2159
53 Ga0070712_100004754 3300006175 Bacteria 8395
54 Ga0070712_100008350 3300006175 Bacteria 6511
55 Ga0075369_10004242 3300006186 Bacteria 5282
56 Ga0075369_10049551 3300006186 Bacteria 1814
57 Ga0075369_10059665 3300006186 Bacteria 1662
58 Ga0075428_100043312 3300006844 Bacteria 4948
59 Ga0075430_100220341 3300006846 Bacteria 1574
60 Ga0097620_100002659 3300006931 Bacteria 18141
61 Ga0099795_10000516 3300007788 Bacteria 7255
62 Ga0105244_10076303 3300009036 Bacteria 1664
63 Ga0105245_10356765 3300009098 Bacteria 1450
64 Ga0105247_10000021 3300009101 Bacteria 229443
65 Ga0105247_10126012 3300009101 Bacteria 1665
66 Ga0114129_10029366 3300009147 Bacteria 7789
67 Ga0105243_10020488 3300009148 Bacteria 5013
68 Ga0105243_10048410 3300009148 Bacteria 3351
69 Ga0105243_10217169 3300009148 Bacteria 1688
70 Ga0105243_10227289 3300009148 Bacteria 1653
71 Ga0105241_10068901 3300009174 Bacteria 2742
72 Ga0105242_10127568 3300009176 Bacteria 2192
73 Ga0105248_10000141 3300009177 Bacteria 82929
74 Ga0105249_10000060 3300009553 Bacteria 153462
75 Ga0099796_10014450 3300010159 Bacteria 2282
76 Ga0105246_10003250 3300011119 Bacteria 9860
77 Ga0105246_10425210 3300011119 Bacteria 1110
78 Ga0157369_10029896 3300013105 Bacteria 6015
79 Ga0157369_10137334 3300013105 Bacteria 2588
80 Ga0157378_10125781 3300013297 Bacteria 2368
81 Ga0163162_10025765 3300013306 Bacteria 5814
82 Ga0163162_10038207 3300013306 Bacteria 4791
83 Ga0163162_10081744 3300013306 Bacteria 3302
84 Ga0163162_10156677 3300013306 Bacteria 2397
85 Ga0163162_10331095 3300013306 Bacteria 1655
86 Ga0157372_10095447 3300013307 Bacteria 3388
87 Ga0157375_10020988 3300013308 Bacteria 5979
88 Ga0157375_10174399 3300013308 Bacteria 2299
89 Ga0157375_10308511 3300013308 Bacteria 1746
90 Ga0163163_10152508 3300014325 Bacteria 2354
91 Ga0182008_10101328 3300014497 Bacteria 1424
92 Ga0157379_10090076 3300014968 Bacteria 2752
93 Ga0157376_10380022 3300014969 Bacteria 1360
94 Ga0209051_1000378 3300025303 Bacteria 63497
95 Ga0209051_1003085 3300025303 Bacteria 11243
96 Ga0207656_10057889 3300025321 Bacteria 1692
97 Ga0207653_10001797 3300025885 Bacteria 6853
98 Ga0207692_10020849 3300025898 Bacteria 2989
99 Ga0207642_10002190 3300025899 Bacteria 6057
100 Ga0207710_10000027 3300025900 Bacteria 307001
101 Ga0207710_10031215 3300025900 Bacteria 2328
102 Ga0207710_10119947 3300025900 Bacteria 1255
103 Ga0207647_10011201 3300025904 Bacteria 6300
104 Ga0207685_10068031 3300025905 Bacteria 1434
105 Ga0207699_10144799 3300025906 Bacteria 1565
106 Ga0207681_10019756 3300025923 Bacteria 4262
107 Ga0207687_10017612 3300025927 Bacteria 4706
108 Ga0207706_10003696 3300025933 Bacteria 14607
109 Ga0207686_10014983 3300025934 Bacteria 4327
110 Ga0207686_10124194 3300025934 Bacteria 1762
111 Ga0207665_10048709 3300025939 Bacteria 2845
112 Ga0207711_10000311 3300025941 Bacteria 52029
113 Ga0207711_10047232 3300025941 Bacteria 3680
114 Ga0207689_10011402 3300025942 Bacteria 7618
115 Ga0207661_10376960 3300025944 Bacteria 1284
116 Ga0207651_10064038 3300025960 Bacteria 2571
117 Ga0207712_10000051 3300025961 Bacteria 153466
118 Ga0207712_10012371 3300025961 Bacteria 5452
119 Ga0207668_10023912 3300025972 Bacteria 3936
120 Ga0207668_10470190 3300025972 Bacteria 1076
121 Ga0207640_10055938 3300025981 Bacteria 2587
122 Ga0207658_10000716 3300025986 Bacteria 28697
123 Ga0207677_10002764 3300026023 Bacteria 9268
124 Ga0207677_10119823 3300026023 Bacteria 1977
125 Ga0207703_10023361 3300026035 Bacteria 4856
126 Ga0207703_10032390 3300026035 Bacteria 4137
127 Ga0207703_10359458 3300026035 Bacteria 1342
128 Ga0207639_10013618 3300026041 Bacteria 5700
129 Ga0207639_10017422 3300026041 Bacteria 5092
130 Ga0207708_10021676 3300026075 Bacteria 4846
131 Ga0207702_10041113 3300026078 Bacteria 3876
132 Ga0207641_10000162 3300026088 Bacteria 94111
133 Ga0207641_10075646 3300026088 Bacteria 2908
134 Ga0207676_10115208 3300026095 Bacteria 2256
135 Ga0207675_100132298 3300026118 Bacteria 2365
136 Ga0209179_1001427 3300027512 Bacteria 2922
137 Ga0268265_10000028 3300028380 Bacteria 236467
138 Ga0268265_10287532 3300028380 Bacteria 1474
139 Ga0268264_10000092 3300028381 Bacteria 232950
140 Ga0307515_10052738 3300028794 Bacteria 6023
141 Ga0307515_10109301 3300028794 Bacteria 3249
142 Ga0307512_10094561 3300030522 Bacteria 2061
143 Ga0307513_10001463 3300031456 Bacteria 33963
144 Ga0307408_100012755 3300031548 Bacteria 5573
145 Ga0307408_100256874 3300031548 Bacteria 1444
146 Ga0307516_10154884 3300031730 Bacteria 2048
147 Ga0307405_10025527 3300031731 Bacteria 3395
148 Ga0307405_10035279 3300031731 Bacteria 2986
149 Ga0307405_10083699 3300031731 Bacteria 2092
150 Ga0307413_10023161 3300031824 Bacteria 3362
151 Ga0307518_10001068 3300031838 Bacteria 20520
152 Ga0307410_10032499 3300031852 Bacteria 3359
153 Ga0307410_10115378 3300031852 Bacteria 1950
154 Ga0326468_10000442 3300031889 Bacteria 4436
155 Ga0307406_10169756 3300031901 Bacteria 1577
156 Ga0307407_10062538 3300031903 Bacteria 2180
157 Ga0307407_10096161 3300031903 Bacteria 1827
158 Ga0307407_10268192 3300031903 Bacteria 1177
159 Ga0307412_10053343 3300031911 Bacteria 2680
160 Ga0307409_100051754 3300031995 Bacteria 3144
161 Ga0307409_100180214 3300031995 Bacteria 1869
162 Ga0307409_100208259 3300031995 Bacteria 1755
163 Ga0307416_100020049 3300032002 Bacteria 4760
164 Ga0307416_100049242 3300032002 Bacteria 3349
165 Ga0307416_100258797 3300032002 Bacteria 1699
166 Ga0307416_100263062 3300032002 Bacteria 1687
167 Ga0307414_10190138 3300032004 Bacteria 1660
168 Ga0307414_10306095 3300032004 Bacteria 1347
169 Ga0307411_10166766 3300032005 Bacteria 1656
170 Ga0395899_0000734 3300037312 Bacteria 32689
171 Ga0395899_0262025 3300037312 Bacteria 1182
172 Ga0395900_0054134 3300037418 Bacteria 4131
173 Ga0395900_0055838 3300037418 Bacteria 4066
174 Ga0395900_0058222 3300037418 Bacteria 3978
175 Ga0395905_0015536 3300037471 Bacteria 7235
176 Ga0395901_0055906 3300038443 Bacteria 4105
177 Ga0395901_0065914 3300038443 Bacteria 3772
178 Ga0436365_1588316 3300039437 Bacteria 6643
179 Ga0436363_1038462 3300039450 Bacteria 1294
180 Ga0439465_0000280 3300041413 Bacteria 14305
181 Ga0451789_0141864 3300041443 Bacteria 1675
182 Ga0466961_0017275 3300044693 Bacteria 4633
183 Ga0466963_0184525 3300044694 Bacteria 1457
184 Ga0466971_0122010 3300044719 Bacteria 1207
185 Ga0466970_0076976 3300044765 Bacteria 1798
186 Ga0466970_0114461 3300044765 Bacteria 1474
187 Ga0466960_0003589 3300044901 Bacteria 5984
188 Ga0466959_0169546 3300045049 Bacteria 1531
189 Ga0466958_0145284 3300045836 Bacteria 1494
190 Ga0466967_0036152 3300045976 Bacteria 4214
191 Ga0466967_0048346 3300045976 Bacteria 3714
192 Ga0466967_0079129 3300045976 Bacteria 2963
193 Ga0495627_013807 3300046453 Bacteria 2836
194 Ga0495582_0012271 3300046473 Bacteria 4721
195 Ga0495625_0048273 3300046660 Bacteria 3067
196 Ga0495658_0008754 3300046683 Bacteria 5027
197 Ga0495624_0046704 3300046690 Bacteria 2753
198 Ga0495581_0103696 3300047315 Bacteria 1653
199 Ga0495676_0098156 3300047321 Bacteria 2174
200 Ga0495593_0009558 3300047673 Bacteria 5628
201 Ga0496100_0000825 3300048903 Bacteria 14877
202 Ga0496100_0001209 3300048903 Bacteria 12545
203 Ga0496100_0048185 3300048903 Bacteria 2750
204 Ga0496101_0009874 3300048904 Bacteria 6288
205 Ga0496101_0010850 3300048904 Bacteria 6027
206 Ga0496101_0062214 3300048904 Bacteria 2713
207 Ga0496101_0064886 3300048904 Bacteria 2661
208 Ga0496102_0000458 3300048905 Bacteria 45701
209 Ga0496102_0001582 3300048905 Bacteria 20084
210 Ga0496102_0042927 3300048905 Bacteria 4098
211 Ga0496102_0060953 3300048905 Bacteria 3452
212 Ga0496102_0064066 3300048905 Bacteria 3366
213 Ga0496102_0285393 3300048905 Bacteria 1556
214 Ga0496103_0000466 3300048906 Bacteria 34185
215 Ga0496103_0008873 3300048906 Bacteria 5964
216 Ga0496103_0056744 3300048906 Bacteria 2431
217 Ga0496104_0005913 3300048907 Bacteria 10711
218 Ga0496104_0079526 3300048907 Bacteria 3125
219 Ga0496104_0204936 3300048907 Bacteria 1884
220 Ga0496105_0016242 3300048908 Bacteria 5940
221 Ga0496105_0110069 3300048908 Bacteria 2273
222 Ga0496105_0152829 3300048908 Bacteria 1897
223 Ga0496106_0001836 3300048909 Bacteria 15905
224 Ga0496106_0030164 3300048909 Bacteria 4043
225 Ga0496106_0051307 3300048909 Bacteria 3110
226 Ga0496107_0002269 3300048910 Bacteria 12407
227 Ga0496107_0055912 3300048910 Bacteria 2850
228 Ga0496107_0266596 3300048910 Bacteria 1274
229 Ga0496108_0005333 3300048911 Bacteria 10388
230 Ga0496108_0010956 3300048911 Bacteria 7363
231 Ga0496108_0029676 3300048911 Bacteria 4531
232 Ga0496108_0035018 3300048911 Bacteria 4172
233 Ga0496109_0013749 3300048912 Bacteria 7033
234 Ga0496109_0017511 3300048912 Bacteria 6282
235 Ga0496109_0036525 3300048912 Bacteria 4435
236 Ga0496109_0148330 3300048912 Bacteria 2195
237 Ga0496109_0239097 3300048912 Bacteria 1709
238 Ga0496109_0314008 3300048912 Bacteria 1479
239 Ga0496110_0023889 3300048913 Bacteria 5204
240 Ga0496110_0083492 3300048913 Bacteria 2850
241 Ga0496113_0080091 3300048916 Bacteria 2501
242 Ga0496117_0012801 3300048920 Bacteria 7357
243 Ga0496118_0004702 3300048921 Bacteria 16003
244 Ga0496119_0018118 3300048922 Bacteria 5258
245 Ga0496121_0007293 3300048924 Bacteria 13373
246 Ga0496124_0032862 3300048927 Bacteria 4574
247 Ga0496125_0025813 3300048928 Bacteria 5370
248 Ga0501032_0000131 3300049569 Bacteria 60888
249 Ga0501032_0000208 3300049569 Bacteria 48991
250 Ga0501032_0008009 3300049569 Bacteria 7701
251 Ga0501033_0029830 3300049570 Bacteria 4099
252 Ga0501033_0148315 3300049570 Bacteria 1693
253 Ga0501034_0088963 3300049571 Bacteria 3086
254 Ga0501036_0015093 3300049572 Bacteria 6447
255 Ga0501036_0127532 3300049572 Bacteria 2149
256 Ga0501038_0005267 3300049574 Bacteria 12028
257 Ga0501038_0009545 3300049574 Bacteria 8901
258 Ga0501039_0000455 3300049575 Bacteria 29734
259 Ga0501039_0015219 3300049575 Bacteria 5888
260 Ga0501043_0011399 3300049579 Bacteria 6959
261 Ga0501043_0047869 3300049579 Bacteria 3362
262 Ga0501047_0104587 3300049581 Bacteria 2711
263 Ga0501067_0026653 3300049583 Bacteria 3200
264 Ga0501044_0395583 3300049823 Bacteria 1295
265 nmdc:mga05p37_27504_c1 3300050507 Bacteria 6923
266 nmdc:mga06r32_109064_c1 3300050510 Bacteria 2722
267 nmdc:mga06r32_2134_c1 3300050510 Bacteria 17665
268 nmdc:mga0n895_557214_c1 3300050512 Bacteria 1151
269 nmdc:mga0sz30_1591_c1 3300050516 Bacteria 1747
270 Ga0495655_0024305 3300053083 Bacteria 1406
271 Ga0500643_003589 3300053087 Bacteria 7376
272 Ga0500646_0052349 3300053090 Bacteria 1181
273 Ga0587066_004039 3300059490 Bacteria 1774
274 Ga0587077_006352 3300059493 Bacteria 1669
275 Ga0587078_002836 3300059646 Bacteria 1707
276 Ga0587079_008584 3300059647 Bacteria 1567
277 Ga0587111_0006892 3300060346 Bacteria 1822
278 Ga0530510_0078769 3300061734 Bacteria 2397
279 2523384682 2523231044 Bacteria 6434991
280 2528205979 2527291627 Bacteria 5309833
281 2528214604 2527291629 Bacteria 5267418
282 2528215643 2527291629 Bacteria 5267418
283 2546950025 2546825537 Bacteria 5389291
284 2546951159 2546825537 Bacteria 5389291
285 2547409000 2547132111 Bacteria 8013147
286 2579750112 2576861822 Bacteria 5004595
287 2579750831 2576861822 Bacteria 5004595
288 2583148783 2582580736 Bacteria 5325865
289 2643852193 2643221567 Bacteria 4163945
290 2643890844 2643221576 Bacteria 5214352
291 2643959900 2643221590 Bacteria 5214697
292 2644136375 2643221624 Bacteria 4384879
293 2644488074 2643221687 Bacteria 6500351
294 2686542847 2684623036 Bacteria 5199090
295 2686544040 2684623036 Bacteria 5199090
296 2710603717 2710264753 Bacteria 5455564
297 2710605267 2710264753 Bacteria 5455564
298 2740167883 2739367898 Bacteria 4367674
299 2774394733 2773857762 Bacteria 5971770
300 2774865742 2773857924 Bacteria 5256821
301 2774866830 2773857924 Bacteria 5256821
302 2808873976 2808606365 Bacteria 4301966
303 2809194423 2808606439 Bacteria 5952208
304 2812349172 2811994878 Bacteria 5992952
305 2812373069 2811994882 Bacteria 4688362
306 2812373472 2811994882 Bacteria 4688362
307 2816421079 2816332119 Bacteria 8120218
308 2816506127 2816332139 Bacteria 9138787
309 2819425843 2818991318 Bacteria 5266538
310 2819427983 2818991318 Bacteria 5266538
311 2819727050 2818991469 Bacteria 4644110
312 2837270146 2837268691 Bacteria 7850704
313 2863073573 2863067949 Bacteria 8541735
314 2866553889 2866552031 Bacteria 5824618
315 2866614873 2866612099 Bacteria 7543886
316 2867348354 2867346516 Bacteria 7608576
317 2899371646 2899370129 Bacteria 6781179
318 2899374264 2899370129 Bacteria 6781179
319 2917740816 2917736166 Bacteria 9690793
320 2919053975 2919051321 Bacteria 4210889
321 2919449250 2919446982 Bacteria 3994487
322 2946004891 2946003308 Bacteria 3857229
323 637879846 637000116 Bacteria 5433628
324 8047714850 8047710418 Bacteria 11023148
325 8054478770 8054472261 Bacteria 7464355
326 8056039125 8056037122 Bacteria 3854319
327 Ga0466961_0102168
328 LJQas_1003595
329 JGI24740J21852_10015033
330 JGI24739J22299_10007280
331 JGI24737J22298_10012672
332 JGI24735J21928_10019850
333 JGI24738J21930_10017384
334 JGI24742J22300_10005856
335 JGI25406J46586_10004403
336 rootL2_10139772
337 Ga0055540_1001074
338 Ga0055540_1004115
339 Ga0070683_100252084
340 Ga0068869_100025102
341 Ga0070692_10089283
342 Ga0070671_100058379
343 Ga0070674_100036871
344 Ga0070667_100000022
345 Ga0070667_100003273
346 Ga0070709_10100803
347 Ga0070710_10002375
348 Ga0070711_100022403
349 Ga0070705_100015102
350 Ga0070700_100028408
351 Ga0070678_100086136
352 Ga0070685_10119610
353 Ga0070707_100527527
354 Ga0068853_100018942
355 Ga0068853_100084744
356 Ga0070696_100043353
357 Ga0070665_100010185
358 Ga0068859_100002659
359 Ga0068861_100153828
360 Ga0068863_100000699
361 Ga0068863_100104918
362 Ga0068858_100387874
363 Ga0068860_100000038
364 Ga0068862_100000064
365 Ga0068862_100160515
366 Ga0068862_100315317
367 Ga0081455_10013674
368 Ga0081455_10014401
369 Ga0081455_10018415
370 Ga0081455_10069011
371 Ga0081538_10000202
372 Ga0081538_10035598
373 Ga0081539_10000911
374 Ga0081539_10001346
375 Ga0075365_10183627
376 Ga0070715_10006118
377 Ga0070716_100008886
378 Ga0070716_100062470
379 Ga0070712_100004754
380 Ga0070712_100008350
381 Ga0075369_10004242
382 Ga0075369_10049551
383 Ga0075369_10059665
384 Ga0075428_100043312
385 Ga0075430_100220341
386 Ga0097620_100002659
387 Ga0099795_10000516
388 Ga0105244_10076303
389 Ga0105245_10356765
390 Ga0105247_10000021
391 Ga0105247_10126012
392 Ga0114129_10029366
393 Ga0105243_10020488
394 Ga0105243_10048410
395 Ga0105243_10217169
396 Ga0105243_10227289
397 Ga0105241_10068901
398 Ga0105242_10127568
399 Ga0105248_10000141
400 Ga0105249_10000060
401 Ga0099796_10014450
402 Ga0105246_10003250
403 Ga0105246_10425210
404 Ga0157369_10029896
405 Ga0157369_10137334
406 Ga0157378_10125781
407 Ga0163162_10025765
408 Ga0163162_10038207
409 Ga0163162_10081744
410 Ga0163162_10156677
411 Ga0163162_10331095
412 Ga0157372_10095447
413 Ga0157375_10020988
414 Ga0157375_10174399
415 Ga0157375_10308511
416 Ga0163163_10152508
417 Ga0182008_10101328
418 Ga0157379_10090076
419 Ga0157376_10380022
420 Ga0209051_1000378
421 Ga0209051_1003085
422 Ga0207656_10057889
423 Ga0207653_10001797
424 Ga0207692_10020849
425 Ga0207642_10002190
426 Ga0207710_10000027
427 Ga0207710_10031215
428 Ga0207710_10119947
429 Ga0207647_10011201
430 Ga0207685_10068031
431 Ga0207699_10144799
432 Ga0207681_10019756
433 Ga0207687_10017612
434 Ga0207706_10003696
435 Ga0207686_10014983
436 Ga0207686_10124194
437 Ga0207665_10048709
438 Ga0207711_10000311
439 Ga0207711_10047232
440 Ga0207689_10011402
441 Ga0207661_10376960
442 Ga0207651_10064038
443 Ga0207712_10000051
444 Ga0207712_10012371
445 Ga0207668_10023912
446 Ga0207668_10470190
447 Ga0207640_10055938
448 Ga0207658_10000716
449 Ga0207677_10002764
450 Ga0207677_10119823
451 Ga0207703_10023361
452 Ga0207703_10032390
453 Ga0207703_10359458
454 Ga0207639_10013618
455 Ga0207639_10017422
456 Ga0207708_10021676
457 Ga0207702_10041113
458 Ga0207641_10000162
459 Ga0207641_10075646
460 Ga0207676_10115208
461 Ga0207675_100132298
462 Ga0209179_1001427
463 Ga0268265_10000028
464 Ga0268265_10287532
465 Ga0268264_10000092
466 Ga0307515_10052738
467 Ga0307515_10109301
468 Ga0307512_10094561
469 Ga0307513_10001463
470 Ga0307408_100012755
471 Ga0307408_100256874
472 Ga0307516_10154884
473 Ga0307405_10025527
474 Ga0307405_10035279
475 Ga0307405_10083699
476 Ga0307413_10023161
477 Ga0307518_10001068
478 Ga0307410_10032499
479 Ga0307410_10115378
480 Ga0326468_10000442
481 Ga0307406_10169756
482 Ga0307407_10062538
483 Ga0307407_10096161
484 Ga0307407_10268192
485 Ga0307412_10053343
486 Ga0307409_100051754
487 Ga0307409_100180214
488 Ga0307409_100208259
489 Ga0307416_100020049
490 Ga0307416_100049242
491 Ga0307416_100258797
492 Ga0307416_100263062
493 Ga0307414_10190138
494 Ga0307414_10306095
495 Ga0307411_10166766
496 Ga0395899_0000734
497 Ga0395899_0262025
498 Ga0395900_0054134
499 Ga0395900_0055838
500 Ga0395900_0058222
501 Ga0395905_0015536
502 Ga0395901_0055906
503 Ga0395901_0065914
504 Ga0436365_1588316
505 Ga0436363_1038462
506 Ga0439465_0000280
507 Ga0451789_0141864
508 Ga0466961_0017275
509 Ga0466963_0184525
510 Ga0466971_0122010
511 Ga0466970_0076976
512 Ga0466970_0114461
513 Ga0466960_0003589
514 Ga0466959_0169546
515 Ga0466958_0145284
516 Ga0466967_0036152
517 Ga0466967_0048346
518 Ga0466967_0079129
519 Ga0495627_013807
520 Ga0495582_0012271
521 Ga0495625_0048273
522 Ga0495658_0008754
523 Ga0495624_0046704
524 Ga0495581_0103696
525 Ga0495676_0098156
526 Ga0495593_0009558
527 Ga0496100_0000825
528 Ga0496100_0001209
529 Ga0496100_0048185
530 Ga0496101_0009874
531 Ga0496101_0010850
532 Ga0496101_0062214
533 Ga0496101_0064886
534 Ga0496102_0000458
535 Ga0496102_0001582
536 Ga0496102_0042927
537 Ga0496102_0060953
538 Ga0496102_0064066
539 Ga0496102_0285393
540 Ga0496103_0000466
541 Ga0496103_0008873
542 Ga0496103_0056744
543 Ga0496104_0005913
544 Ga0496104_0079526
545 Ga0496104_0204936
546 Ga0496105_0016242
547 Ga0496105_0110069
548 Ga0496105_0152829
549 Ga0496106_0001836
550 Ga0496106_0030164
551 Ga0496106_0051307
552 Ga0496107_0002269
553 Ga0496107_0055912
554 Ga0496107_0266596
555 Ga0496108_0005333
556 Ga0496108_0010956
557 Ga0496108_0029676
558 Ga0496108_0035018
559 Ga0496109_0013749
560 Ga0496109_0017511
561 Ga0496109_0036525
562 Ga0496109_0148330
563 Ga0496109_0239097
564 Ga0496109_0314008
565 Ga0496110_0023889
566 Ga0496110_0083492
567 Ga0496113_0080091
568 Ga0496117_0012801
569 Ga0496118_0004702
570 Ga0496119_0018118
571 Ga0496121_0007293
572 Ga0496124_0032862
573 Ga0496125_0025813
574 Ga0501032_0000131
575 Ga0501032_0000208
576 Ga0501032_0008009
577 Ga0501033_0029830
578 Ga0501033_0148315
579 Ga0501034_0088963
580 Ga0501036_0015093
581 Ga0501036_0127532
582 Ga0501038_0005267
583 Ga0501038_0009545
584 Ga0501039_0000455
585 Ga0501039_0015219
586 Ga0501043_0011399
587 Ga0501043_0047869
588 Ga0501047_0104587
589 Ga0501067_0026653
590 Ga0501044_0395583
591 nmdc:mga05p37_27504_c1
592 nmdc:mga06r32_109064_c1
593 nmdc:mga06r32_2134_c1
594 nmdc:mga0n895_557214_c1
595 nmdc:mga0sz30_1591_c1
596 Ga0495655_0024305
597 Ga0500643_003589
598 Ga0500646_0052349
599 Ga0587066_004039
600 Ga0587077_006352
601 Ga0587078_002836
602 Ga0587079_008584
603 Ga0587111_0006892
604 Ga0530510_0078769
605 2523384682
606 2528205979
607 2528214604
608 2528215643
609 2546950025
610 2546951159
611 2547409000
612 2579750112
613 2579750831
614 2583148783
615 2643852193
616 2643890844
617 2643959900
618 2644136375
619 2644488074
620 2686542847
621 2686544040
622 2710603717
623 2710605267
624 2740167883
625 2774394733
626 2774865742
627 2774866830
628 2808873976
629 2809194423
630 2812349172
631 2812373069
632 2812373472
633 2816421079
634 2816506127
635 2819425843
636 2819427983
637 2819727050
638 2837270146
639 2863073573
640 2866553889
641 2866614873
642 2867348354
643 2899371646
644 2899374264
645 2917740816
646 2919053975
647 2919449250
648 2946004891
649 637879846
650 8047714850
651 8054478770
652 8056039125

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04909

Amidohydro_2

Amidohydrolase

64

370

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3irs-assembly1.cif.gz_B crystal structure of uncharacterized tim-barrel protein bb4693 from bordetella bronchiseptica 0.8129 10 318
3irs-assembly1.cif.gz_B crystal structure of uncharacterized tim-barrel protein bb4693 from bordetella bronchiseptica 0.7999 10 318
3cjp-assembly1.cif.gz_B crystal structure of an uncharacterized amidohydrolase cac3332 from clostridium acetobutylicum 0.6921 10 318
3cjp-assembly1.cif.gz_B crystal structure of an uncharacterized amidohydrolase cac3332 from clostridium acetobutylicum 0.6897 10 318
6jqx-assembly1.cif.gz_B crystal structure of a hydrogenase from trichosporon moniliiforme 0.6585 8 319
ID Description Score Start End Superfamily
af_Q50662_37_305_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8144 38 317 3.20.20.140
af_Q50662_37_305_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8061 38 317 3.20.20.140
3k4wC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.7992 11 318 3.20.20.140
3k4wC00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.7837 11 318 3.20.20.140
af_I6Y3Q7_2_272_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.7507 12 320 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A4Q5Z3X5-F1-model_v4 deleted 0.9856 1 323
AF-A0A4Q5Z3X5-F1-model_v4 deleted 0.9796 1 323
AF-A0A229T5N8-F1-model_v4 Amidohydrolase 0.976 1 333 GO:0016787
AF-A0A7T6ZBJ3-F1-model_v4 Amidohydrolase family protein 0.976 1 319 GO:0016787
AF-A0A7W1AVP1-F1-model_v4 Amidohydrolase 0.975 1 284 GO:0016787

Map