F408265

General Info

Members Datasets Scaffolds Average Seq Length
326 190 652 474

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10021156|Ga0105240_100211568
Length 517
Sequence MPPTRKSRPAAGIDFAPDLLSSGINQYMSGENPSFKPTLGLMDATMIVAGSMIGSGIFIVTADIVRNVGSAGWLILVWAVTGFMTIIAAVSYGELSGMFPRAGGQYLYLKESYNPLVGFLYGWSLFSVIQTGTIAAVGVAFSKFTAYLIPAVSEDNKLISIQTGVNACGDPSTFSISAAQLLSIGIIGLLTYTNTRGIKGGKRIQNIFTSTKLIALFGLILAGFVAFRPEIWHANWSHAWDATKTTLQDICNPSGGFTITPISGAALFGAIAAAMVGSVFSSDAWNNVTFIAGEIRNPQKNIGASLFLGTLIVTIVYIGANLMYISVLPLNEIAHAEKDRIAVTAAHVIFGNGGTIIIALLIMVSTFGCNNGLILSGARVYYSMANDKLFFRKAGELNKNAVPQWALWAQFVVAAVLCLSGKYGDLLDMISFVVVIFYVLTIAGIFILRKKRPDLPRPYRAFGYPVLPFLYIVMGISFCILLIIYKPEFTWPGLIITLLGIPLYFIAVAGNRKTTAP

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
9 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
10 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
77 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
78 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
79 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
121 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
122 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
123 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
124 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
125 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
126 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
127 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
128 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
129 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
130 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
131 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
132 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
133 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
134 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
135 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
136 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
137 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
138 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
141 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
142 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
143 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
144 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
145 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
146 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
147 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
148 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
149 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
150 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
151 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
152 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
153 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
154 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
155 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
156 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
157 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
158 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
159 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
160 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
161 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
162 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
170 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
171 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
172 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
173 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
174 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
182 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
183 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
186 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
187 2818991444 Filimonas endophytica 3197 Isolate Unclassified
188 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
189 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
190 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.47
Metatranscriptomes 0
Isolates 1.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.44
Nodule 0
Rhizoplane 0.61
Rhizosphere 86.2
Stem 0
Stem Tuber 0
Unclassified 1.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10021156 3300009093 Bacteria 8660
2 JGI24737J22298_10012985 3300001990 Bacteria 2714
3 JGI25162J39368_1000047 3300002737 Viruses 167507
4 JGI25162J39368_1002927 3300002737 Bacteria 5786
5 JGI25165J46597_1001383 3300003214 Bacteria 13315
6 rootH1_10095164 3300003316 Bacteria 3254
7 rootH2_10022620 3300003320 Bacteria 40599
8 rootH2_10056552 3300003320 Bacteria 8143
9 rootH2_10087465 3300003320 Bacteria 5160
10 rootH2_10174800 3300003320 Bacteria 4002
11 rootH1_10054770 3300003323 Bacteria 9394
12 rootH1_10087540 3300003323 Bacteria 12636
13 Ga0055536_1007600 3300003781 Bacteria 4816
14 Ga0065165_1000458 3300005262 Bacteria 63926
15 Ga0065714_10002367 3300005288 Bacteria 24312
16 Ga0065704_10071410 3300005289 Bacteria 11304
17 Ga0065704_10088178 3300005289 Bacteria 2961
18 Ga0065707_10119094 3300005295 Bacteria 2168
19 Ga0070658_10000200 3300005327 Bacteria 52651
20 Ga0070658_10002376 3300005327 Bacteria 15801
21 Ga0070676_10000735 3300005328 Bacteria 16068
22 Ga0070676_10070166 3300005328 Bacteria 2101
23 Ga0068869_100157436 3300005334 Bacteria 1766
24 Ga0070666_10005942 3300005335 Bacteria 7492
25 Ga0070680_100000212 3300005336 Bacteria 38186
26 Ga0070682_100002293 3300005337 Bacteria 10581
27 Ga0068868_100000177 3300005338 Bacteria 42348
28 Ga0070660_100114635 3300005339 Bacteria 2147
29 Ga0070691_10005204 3300005341 Bacteria 5911
30 Ga0070668_100000022 3300005347 Bacteria 96336
31 Ga0070669_100091877 3300005353 Unclassified 2277
32 Ga0070671_100018095 3300005355 Bacteria 5720
33 Ga0070674_100039087 3300005356 Bacteria 3203
34 Ga0070673_100000248 3300005364 Bacteria 27287
35 Ga0070673_100008636 3300005364 Bacteria 6787
36 Ga0070673_100095193 3300005364 Bacteria 2442
37 Ga0070667_100000584 3300005367 Bacteria 36027
38 Ga0070667_100004519 3300005367 Bacteria 11716
39 Ga0070681_10006048 3300005458 Bacteria 11733
40 Ga0068867_100000678 3300005459 Bacteria 22556
41 Ga0068867_100009855 3300005459 Bacteria 6734
42 Ga0068867_100085720 3300005459 Bacteria 2382
43 Ga0068867_100150232 3300005459 Bacteria 1829
44 Ga0070698_100006296 3300005471 Bacteria 12895
45 Ga0070698_100026982 3300005471 Bacteria 5973
46 Ga0070679_100000397 3300005530 Bacteria 37025
47 Ga0068853_100006653 3300005539 Bacteria 9204
48 Ga0068853_100010457 3300005539 Bacteria 7511
49 Ga0068853_100014397 3300005539 Bacteria 6476
50 Ga0070672_100000067 3300005543 Bacteria 47884
51 Ga0070672_100056236 3300005543 Bacteria 3085
52 Ga0070693_100002457 3300005547 Bacteria 8540
53 Ga0070665_100000010 3300005548 Bacteria 529545
54 Ga0070665_100001573 3300005548 Bacteria 26325
55 Ga0070665_100006785 3300005548 Bacteria 11638
56 Ga0068855_100003209 3300005563 Bacteria 20016
57 Ga0068855_100056898 3300005563 Bacteria 4585
58 Ga0068855_100085222 3300005563 Bacteria 3657
59 Ga0068855_100165121 3300005563 Bacteria 2510
60 Ga0068855_100195940 3300005563 Bacteria 2276
61 Ga0068857_100098546 3300005577 Bacteria 2622
62 Ga0068856_100000023 3300005614 Bacteria 141671
63 Ga0068859_100002826 3300005617 Bacteria 17604
64 Ga0068859_100031753 3300005617 Bacteria 5304
65 Ga0068864_100001985 3300005618 Bacteria 16848
66 Ga0068861_100021459 3300005719 Bacteria 4641
67 Ga0068851_10009616 3300005834 Bacteria 4501
68 Ga0068851_10010367 3300005834 Bacteria 4350
69 Ga0068863_100001149 3300005841 Bacteria 26408
70 Ga0068858_100000833 3300005842 Bacteria 32109
71 Ga0068858_100050952 3300005842 Bacteria 3831
72 Ga0068860_100003361 3300005843 Bacteria 16469
73 Ga0068860_100009661 3300005843 Bacteria 9582
74 Ga0075366_10007346 3300006195 Bacteria 6079
75 Ga0097621_100127331 3300006237 Bacteria 2164
76 Ga0068871_100005346 3300006358 Bacteria 9002
77 Ga0075428_100235853 3300006844 Bacteria 1974
78 Ga0075429_100087323 3300006880 Bacteria 2718
79 Ga0068865_100002379 3300006881 Bacteria 11088
80 Ga0097620_100002826 3300006931 Bacteria 17604
81 Ga0097620_100031753 3300006931 Bacteria 5304
82 Ga0105240_10000173 3300009093 Bacteria 131281
83 Ga0105240_10000182 3300009093 Bacteria 127798
84 Ga0105240_10000225 3300009093 Bacteria 112806
85 Ga0105240_10007338 3300009093 Bacteria 16040
86 Ga0105240_10010165 3300009093 Bacteria 13248
87 Ga0105240_10012765 3300009093 Bacteria 11577
88 Ga0105240_10055507 3300009093 Bacteria 4959
89 Ga0105240_10217309 3300009093 Bacteria 2229
90 Ga0111539_10002553 3300009094 Bacteria 24107
91 Ga0105245_10155574 3300009098 Bacteria 2165
92 Ga0114129_10020063 3300009147 Bacteria 9513
93 Ga0105241_10000105 3300009174 Bacteria 60020
94 Ga0105241_10003934 3300009174 Bacteria 10993
95 Ga0105241_10017706 3300009174 Bacteria 5238
96 Ga0105248_10128003 3300009177 Bacteria 2865
97 Ga0105237_10000156 3300009545 Bacteria 96442
98 Ga0105237_10000390 3300009545 Bacteria 62424
99 Ga0105237_10000972 3300009545 Bacteria 38509
100 Ga0105237_10005351 3300009545 Bacteria 14526
101 Ga0105237_10005368 3300009545 Bacteria 14495
102 Ga0105237_10006479 3300009545 Bacteria 12974
103 Ga0105238_10038287 3300009551 Bacteria 4870
104 Ga0105238_10054848 3300009551 Bacteria 4002
105 Ga0105249_10034752 3300009553 Bacteria 4568
106 Ga0105249_10034994 3300009553 Bacteria 4553
107 Ga0105239_10000015 3300010375 Bacteria 319892
108 Ga0105239_10000040 3300010375 Bacteria 201445
109 Ga0105239_10000093 3300010375 Bacteria 125821
110 Ga0105239_10000703 3300010375 Bacteria 47494
111 Ga0105239_10000816 3300010375 Bacteria 44236
112 Ga0105239_10002564 3300010375 Bacteria 23044
113 Ga0105239_10008402 3300010375 Bacteria 11757
114 Ga0105239_10021466 3300010375 Bacteria 7119
115 Ga0105239_10081444 3300010375 Bacteria 3563
116 Ga0157373_10000694 3300013100 Bacteria 26384
117 Ga0157371_10000093 3300013102 Bacteria 140564
118 Ga0157371_10000298 3300013102 Bacteria 65719
119 Ga0157370_10000703 3300013104 Bacteria 41837
120 Ga0157370_10003362 3300013104 Bacteria 18832
121 Ga0157370_10128164 3300013104 Bacteria 2368
122 Ga0157369_10011126 3300013105 Bacteria 10230
123 Ga0157369_10185260 3300013105 Bacteria 2189
124 Ga0157374_10000004 3300013296 Bacteria 759774
125 Ga0157374_10000391 3300013296 Bacteria 40035
126 Ga0157374_10001058 3300013296 Bacteria 23891
127 Ga0157374_10002452 3300013296 Bacteria 15655
128 Ga0157378_10010291 3300013297 Bacteria 8167
129 Ga0157378_10015047 3300013297 Bacteria 6773
130 Ga0157378_10016968 3300013297 Bacteria 6383
131 Ga0157378_10026692 3300013297 Bacteria 5091
132 Ga0157378_10061348 3300013297 Bacteria 3355
133 Ga0157378_10085964 3300013297 Bacteria 2850
134 Ga0163162_10000082 3300013306 Bacteria 86888
135 Ga0163162_10000340 3300013306 Bacteria 42478
136 Ga0157372_10000071 3300013307 Bacteria 109638
137 Ga0157372_10010021 3300013307 Bacteria 10077
138 Ga0157372_10136697 3300013307 Bacteria 2823
139 Ga0157375_10002724 3300013308 Bacteria 15265
140 Ga0157375_10018431 3300013308 Bacteria 6330
141 Ga0157375_10025458 3300013308 Bacteria 5498
142 Ga0157375_10185881 3300013308 Bacteria 2231
143 Ga0163163_10000349 3300014325 Bacteria 44503
144 Ga0157377_10004598 3300014745 Bacteria 6377
145 Ga0157379_10001904 3300014968 Bacteria 17257
146 Ga0157379_10023950 3300014968 Bacteria 5418
147 Ga0157379_10040632 3300014968 Bacteria 4152
148 Ga0157376_10000409 3300014969 Bacteria 27934
149 Ga0207427_100137 3300025231 Bacteria 88182
150 Ga0209437_100089 3300025233 Bacteria 250476
151 Ga0209437_100112 3300025233 Bacteria 214292
152 Ga0209129_1004168 3300025258 Bacteria 5832
153 Ga0209233_1000126 3300025261 Bacteria 214298
154 Ga0209233_1002656 3300025261 Bacteria 6475
155 Ga0209455_1007279 3300025272 Bacteria 3146
156 Ga0209676_1000481 3300025292 Bacteria 65739
157 Ga0207697_10010611 3300025315 Bacteria 3931
158 Ga0207656_10005315 3300025321 Bacteria 4542
159 Ga0207680_10002804 3300025903 Bacteria 8154
160 Ga0207647_10000046 3300025904 Bacteria 90148
161 Ga0207647_10000280 3300025904 Bacteria 41619
162 Ga0207647_10012725 3300025904 Bacteria 5847
163 Ga0207647_10032437 3300025904 Bacteria 3355
164 Ga0207645_10000776 3300025907 Bacteria 26656
165 Ga0207645_10050692 3300025907 Bacteria 2651
166 Ga0207643_10122638 3300025908 Bacteria 1541
167 Ga0207705_10000257 3300025909 Bacteria 51549
168 Ga0207705_10002533 3300025909 Bacteria 14074
169 Ga0207654_10001865 3300025911 Bacteria 10912
170 Ga0207654_10002641 3300025911 Bacteria 9096
171 Ga0207654_10117139 3300025911 Bacteria 1667
172 Ga0207707_10000205 3300025912 Bacteria 62610
173 Ga0207695_10000053 3300025913 Bacteria 396740
174 Ga0207695_10000102 3300025913 Bacteria 257838
175 Ga0207695_10000257 3300025913 Bacteria 134853
176 Ga0207695_10001231 3300025913 Bacteria 43824
177 Ga0207695_10008763 3300025913 Bacteria 12613
178 Ga0207695_10010948 3300025913 Bacteria 11032
179 Ga0207695_10052861 3300025913 Bacteria 4252
180 Ga0207695_10056433 3300025913 Bacteria 4086
181 Ga0207695_10070081 3300025913 Bacteria 3586
182 Ga0207695_10076818 3300025913 Bacteria 3394
183 Ga0207695_10152016 3300025913 Bacteria 2253
184 Ga0207671_10000030 3300025914 Bacteria 248197
185 Ga0207671_10001009 3300025914 Bacteria 34436
186 Ga0207671_10001187 3300025914 Bacteria 30919
187 Ga0207671_10001635 3300025914 Bacteria 25501
188 Ga0207671_10081237 3300025914 Bacteria 2431
189 Ga0207671_10100709 3300025914 Bacteria 2188
190 Ga0207660_10006624 3300025917 Bacteria 7515
191 Ga0207652_10000186 3300025921 Bacteria 65493
192 Ga0207681_10095146 3300025923 Unclassified 2136
193 Ga0207694_10147354 3300025924 Bacteria 1895
194 Ga0207644_10073679 3300025931 Bacteria 2504
195 Ga0207706_10000669 3300025933 Bacteria 36066
196 Ga0207706_10134006 3300025933 Bacteria 2179
197 Ga0207704_10000169 3300025938 Bacteria 34738
198 Ga0207704_10004712 3300025938 Bacteria 6260
199 Ga0207691_10000113 3300025940 Bacteria 72765
200 Ga0207691_10005631 3300025940 Bacteria 12112
201 Ga0207711_10112195 3300025941 Bacteria 2426
202 Ga0207667_10002558 3300025949 Bacteria 22619
203 Ga0207667_10007350 3300025949 Bacteria 13260
204 Ga0207667_10020790 3300025949 Bacteria 7290
205 Ga0207667_10083029 3300025949 Bacteria 3318
206 Ga0207667_10088892 3300025949 Bacteria 3194
207 Ga0207651_10000611 3300025960 Bacteria 15043
208 Ga0207651_10100638 3300025960 Bacteria 2143
209 Ga0207712_10002490 3300025961 Bacteria 11859
210 Ga0207668_10000272 3300025972 Bacteria 34458
211 Ga0207640_10039817 3300025981 Bacteria 2978
212 Ga0207658_10001917 3300025986 Bacteria 15540
213 Ga0207658_10003026 3300025986 Bacteria 12013
214 Ga0207677_10001856 3300026023 Bacteria 11166
215 Ga0207677_10003333 3300026023 Bacteria 8500
216 Ga0207703_10008712 3300026035 Bacteria 8008
217 Ga0207703_10024539 3300026035 Bacteria 4742
218 Ga0207639_10003727 3300026041 Bacteria 10256
219 Ga0207639_10019762 3300026041 Bacteria 4810
220 Ga0207639_10022721 3300026041 Bacteria 4521
221 Ga0207639_10073359 3300026041 Bacteria 2683
222 Ga0207702_10004378 3300026078 Bacteria 12586
223 Ga0207702_10005397 3300026078 Bacteria 11196
224 Ga0207641_10002481 3300026088 Bacteria 17042
225 Ga0207648_10000220 3300026089 Bacteria 61703
226 Ga0207648_10000786 3300026089 Bacteria 35737
227 Ga0207648_10106195 3300026089 Bacteria 2464
228 Ga0207676_10003177 3300026095 Bacteria 11712
229 Ga0207676_10054849 3300026095 Bacteria 3125
230 Ga0207674_10125503 3300026116 Bacteria 2532
231 Ga0207675_100024598 3300026118 Bacteria 5599
232 Ga0207683_10003089 3300026121 Bacteria 14546
233 Ga0207683_10057153 3300026121 Bacteria 3425
234 Ga0207698_10117447 3300026142 Bacteria 2244
235 Ga0268266_10006235 3300028379 Bacteria 10950
236 Ga0268266_10014664 3300028379 Bacteria 6733
237 Ga0268264_10008215 3300028381 Bacteria 8667
238 Ga0265323_10000200 3300028653 Bacteria 36094
239 Ga0307515_10000003 3300028794 Bacteria 891317
240 Ga0307515_10000036 3300028794 Bacteria 332188
241 Ga0307515_10000226 3300028794 Bacteria 139533
242 Ga0307515_10001736 3300028794 Bacteria 48546
243 Ga0265327_10000117 3300031251 Bacteria 173075
244 Ga0265327_10000366 3300031251 Bacteria 85818
245 Ga0265316_10062604 3300031344 Bacteria 2887
246 Ga0307513_10130159 3300031456 Unclassified 2464
247 Ga0307509_10013125 3300031507 Bacteria 9833
248 Ga0307509_10025961 3300031507 Bacteria 6539
249 Ga0307508_10005163 3300031616 Bacteria 12502
250 Ga0307410_10005089 3300031852 Bacteria 6913
251 Ga0307407_10040152 3300031903 Bacteria 2607
252 Ga0307409_100011144 3300031995 Bacteria 5646
253 Ga0307416_100022682 3300032002 Bacteria 4537
254 Ga0307414_10016132 3300032004 Bacteria 4532
255 Ga0307414_10034076 3300032004 Bacteria 3372
256 Ga0307415_100028041 3300032126 Bacteria 3576
257 Ga0307507_10000023 3300033179 Bacteria 212423
258 Ga0307510_10004918 3300033180 Bacteria 15810
259 Ga0395899_0032886 3300037312 Bacteria 3897
260 Ga0395900_0000194 3300037418 Bacteria 97768
261 Ga0395900_0019112 3300037418 Bacteria 6987
262 Ga0395898_0374360 3300037466 Unclassified 1358
263 Ga0395905_0000355 3300037471 Bacteria 65176
264 Ga0395905_0041125 3300037471 Bacteria 4337
265 Ga0395905_0049241 3300037471 Bacteria 3948
266 Ga0395901_0007458 3300038443 Bacteria 11042
267 Ga0451849_0626476 3300041505 Bacteria 1527
268 Ga0451853_3635811 3300041512 Bacteria 1748
269 Ga0451577_0029767 3300042876 Bacteria 4935
270 Ga0453684_0016145 3300044712 Bacteria 11711
271 Ga0466971_0041361 3300044719 Bacteria 2070
272 Ga0451576_0049935 3300045051 Bacteria 4390
273 Ga0495585_0000456 3300046492 Bacteria 39053
274 Ga0495606_0007282 3300046507 Bacteria 9969
275 Ga0495643_0000008 3300046522 Bacteria 367010
276 Ga0495648_0008886 3300046524 Bacteria 7853
277 Ga0495633_0000273 3300046558 Bacteria 60402
278 Ga0495633_0062608 3300046558 Bacteria 1742
279 Ga0495611_0000038 3300046648 Bacteria 100121
280 Ga0495611_0003632 3300046648 Bacteria 6758
281 Ga0495625_0001303 3300046660 Bacteria 31159
282 Ga0495658_0012096 3300046683 Bacteria 4359
283 Ga0495649_0016099 3300046694 Bacteria 4244
284 Ga0495674_0047388 3300047319 Bacteria 3812
285 Ga0495687_001711 3300047443 Bacteria 19448
286 Ga0495686_0001370 3300047472 Bacteria 27175
287 Ga0495686_0003606 3300047472 Bacteria 13275
288 Ga0495614_0028162 3300048089 Bacteria 2421
289 Ga0496105_0072909 3300048908 Bacteria 2837
290 Ga0496108_0044125 3300048911 Bacteria 3723
291 Ga0496124_0035032 3300048927 Bacteria 4396
292 Ga0501032_0005804 3300049569 Bacteria 9135
293 Ga0501034_0013745 3300049571 Bacteria 8327
294 Ga0501037_0054882 3300049573 Bacteria 2914
295 Ga0501037_0058495 3300049573 Bacteria 2813
296 Ga0501043_0006098 3300049579 Bacteria 9684
297 Ga0501046_0008803 3300049580 Bacteria 8767
298 Ga0501047_0015834 3300049581 Bacteria 7184
299 Ga0501048_0014354 3300049582 Bacteria 5867
300 Ga0501070_0046362 3300049586 Bacteria 3614
301 Ga0501070_0077728 3300049586 Bacteria 2746
302 Ga0501073_0133952 3300049589 Bacteria 1717
303 Ga0501074_0000729 3300049590 Bacteria 20657
304 Ga0501217_004158 3300049661 Bacteria 2965
305 Ga0501083_0004538 3300049744 Bacteria 9810
306 Ga0501035_0082549 3300049822 Bacteria 2836
307 Ga0501044_0055662 3300049823 Unclassified 4062
308 Ga0501044_0087779 3300049823 Bacteria 3141
309 Ga0501044_0130123 3300049823 Bacteria 2512
310 nmdc:mga0k408_237_c1 3300050493 Bacteria 29636
311 nmdc:mga09592_59273_c1 3300050508 Bacteria 3236
312 nmdc:mga0qj67_56379_c1 3300050509 Bacteria 3114
313 nmdc:mga06r32_129860_c1 3300050510 Bacteria 2491
314 nmdc:mga08y16_10287_c1 3300050511 Bacteria 9818
315 nmdc:mga08y16_66650_c1 3300050511 Bacteria 3757
316 Ga0500635_0001067 3300053080 Bacteria 6557
317 Ga0500594_0006756 3300053118 Bacteria 2584
318 Ga0500628_007561 3300053129 Bacteria 1865
319 Ga0500616_0002678 3300053153 Bacteria 14479
320 Ga0500616_0005856 3300053153 Bacteria 8230
321 Ga0500611_000064 3300053727 Bacteria 44032
322 2522549343 2522125168 Bacteria 7376607
323 2819590785 2818991444 Bacteria 6968812
324 2839991975 2839989709 Bacteria 3773432
325 2852624893 2852623160 Bacteria 4376875
326 2884936211 2884933994 Bacteria 4535041
327 Ga0105240_10021156
328 JGI24737J22298_10012985
329 JGI25162J39368_1000047
330 JGI25162J39368_1002927
331 JGI25165J46597_1001383
332 rootH1_10095164
333 rootH2_10022620
334 rootH2_10056552
335 rootH2_10087465
336 rootH2_10174800
337 rootH1_10054770
338 rootH1_10087540
339 Ga0055536_1007600
340 Ga0065165_1000458
341 Ga0065714_10002367
342 Ga0065704_10071410
343 Ga0065704_10088178
344 Ga0065707_10119094
345 Ga0070658_10000200
346 Ga0070658_10002376
347 Ga0070676_10000735
348 Ga0070676_10070166
349 Ga0068869_100157436
350 Ga0070666_10005942
351 Ga0070680_100000212
352 Ga0070682_100002293
353 Ga0068868_100000177
354 Ga0070660_100114635
355 Ga0070691_10005204
356 Ga0070668_100000022
357 Ga0070669_100091877
358 Ga0070671_100018095
359 Ga0070674_100039087
360 Ga0070673_100000248
361 Ga0070673_100008636
362 Ga0070673_100095193
363 Ga0070667_100000584
364 Ga0070667_100004519
365 Ga0070681_10006048
366 Ga0068867_100000678
367 Ga0068867_100009855
368 Ga0068867_100085720
369 Ga0068867_100150232
370 Ga0070698_100006296
371 Ga0070698_100026982
372 Ga0070679_100000397
373 Ga0068853_100006653
374 Ga0068853_100010457
375 Ga0068853_100014397
376 Ga0070672_100000067
377 Ga0070672_100056236
378 Ga0070693_100002457
379 Ga0070665_100000010
380 Ga0070665_100001573
381 Ga0070665_100006785
382 Ga0068855_100003209
383 Ga0068855_100056898
384 Ga0068855_100085222
385 Ga0068855_100165121
386 Ga0068855_100195940
387 Ga0068857_100098546
388 Ga0068856_100000023
389 Ga0068859_100002826
390 Ga0068859_100031753
391 Ga0068864_100001985
392 Ga0068861_100021459
393 Ga0068851_10009616
394 Ga0068851_10010367
395 Ga0068863_100001149
396 Ga0068858_100000833
397 Ga0068858_100050952
398 Ga0068860_100003361
399 Ga0068860_100009661
400 Ga0075366_10007346
401 Ga0097621_100127331
402 Ga0068871_100005346
403 Ga0075428_100235853
404 Ga0075429_100087323
405 Ga0068865_100002379
406 Ga0097620_100002826
407 Ga0097620_100031753
408 Ga0105240_10000173
409 Ga0105240_10000182
410 Ga0105240_10000225
411 Ga0105240_10007338
412 Ga0105240_10010165
413 Ga0105240_10012765
414 Ga0105240_10055507
415 Ga0105240_10217309
416 Ga0111539_10002553
417 Ga0105245_10155574
418 Ga0114129_10020063
419 Ga0105241_10000105
420 Ga0105241_10003934
421 Ga0105241_10017706
422 Ga0105248_10128003
423 Ga0105237_10000156
424 Ga0105237_10000390
425 Ga0105237_10000972
426 Ga0105237_10005351
427 Ga0105237_10005368
428 Ga0105237_10006479
429 Ga0105238_10038287
430 Ga0105238_10054848
431 Ga0105249_10034752
432 Ga0105249_10034994
433 Ga0105239_10000015
434 Ga0105239_10000040
435 Ga0105239_10000093
436 Ga0105239_10000703
437 Ga0105239_10000816
438 Ga0105239_10002564
439 Ga0105239_10008402
440 Ga0105239_10021466
441 Ga0105239_10081444
442 Ga0157373_10000694
443 Ga0157371_10000093
444 Ga0157371_10000298
445 Ga0157370_10000703
446 Ga0157370_10003362
447 Ga0157370_10128164
448 Ga0157369_10011126
449 Ga0157369_10185260
450 Ga0157374_10000004
451 Ga0157374_10000391
452 Ga0157374_10001058
453 Ga0157374_10002452
454 Ga0157378_10010291
455 Ga0157378_10015047
456 Ga0157378_10016968
457 Ga0157378_10026692
458 Ga0157378_10061348
459 Ga0157378_10085964
460 Ga0163162_10000082
461 Ga0163162_10000340
462 Ga0157372_10000071
463 Ga0157372_10010021
464 Ga0157372_10136697
465 Ga0157375_10002724
466 Ga0157375_10018431
467 Ga0157375_10025458
468 Ga0157375_10185881
469 Ga0163163_10000349
470 Ga0157377_10004598
471 Ga0157379_10001904
472 Ga0157379_10023950
473 Ga0157379_10040632
474 Ga0157376_10000409
475 Ga0207427_100137
476 Ga0209437_100089
477 Ga0209437_100112
478 Ga0209129_1004168
479 Ga0209233_1000126
480 Ga0209233_1002656
481 Ga0209455_1007279
482 Ga0209676_1000481
483 Ga0207697_10010611
484 Ga0207656_10005315
485 Ga0207680_10002804
486 Ga0207647_10000046
487 Ga0207647_10000280
488 Ga0207647_10012725
489 Ga0207647_10032437
490 Ga0207645_10000776
491 Ga0207645_10050692
492 Ga0207643_10122638
493 Ga0207705_10000257
494 Ga0207705_10002533
495 Ga0207654_10001865
496 Ga0207654_10002641
497 Ga0207654_10117139
498 Ga0207707_10000205
499 Ga0207695_10000053
500 Ga0207695_10000102
501 Ga0207695_10000257
502 Ga0207695_10001231
503 Ga0207695_10008763
504 Ga0207695_10010948
505 Ga0207695_10052861
506 Ga0207695_10056433
507 Ga0207695_10070081
508 Ga0207695_10076818
509 Ga0207695_10152016
510 Ga0207671_10000030
511 Ga0207671_10001009
512 Ga0207671_10001187
513 Ga0207671_10001635
514 Ga0207671_10081237
515 Ga0207671_10100709
516 Ga0207660_10006624
517 Ga0207652_10000186
518 Ga0207681_10095146
519 Ga0207694_10147354
520 Ga0207644_10073679
521 Ga0207706_10000669
522 Ga0207706_10134006
523 Ga0207704_10000169
524 Ga0207704_10004712
525 Ga0207691_10000113
526 Ga0207691_10005631
527 Ga0207711_10112195
528 Ga0207667_10002558
529 Ga0207667_10007350
530 Ga0207667_10020790
531 Ga0207667_10083029
532 Ga0207667_10088892
533 Ga0207651_10000611
534 Ga0207651_10100638
535 Ga0207712_10002490
536 Ga0207668_10000272
537 Ga0207640_10039817
538 Ga0207658_10001917
539 Ga0207658_10003026
540 Ga0207677_10001856
541 Ga0207677_10003333
542 Ga0207703_10008712
543 Ga0207703_10024539
544 Ga0207639_10003727
545 Ga0207639_10019762
546 Ga0207639_10022721
547 Ga0207639_10073359
548 Ga0207702_10004378
549 Ga0207702_10005397
550 Ga0207641_10002481
551 Ga0207648_10000220
552 Ga0207648_10000786
553 Ga0207648_10106195
554 Ga0207676_10003177
555 Ga0207676_10054849
556 Ga0207674_10125503
557 Ga0207675_100024598
558 Ga0207683_10003089
559 Ga0207683_10057153
560 Ga0207698_10117447
561 Ga0268266_10006235
562 Ga0268266_10014664
563 Ga0268264_10008215
564 Ga0265323_10000200
565 Ga0307515_10000003
566 Ga0307515_10000036
567 Ga0307515_10000226
568 Ga0307515_10001736
569 Ga0265327_10000117
570 Ga0265327_10000366
571 Ga0265316_10062604
572 Ga0307513_10130159
573 Ga0307509_10013125
574 Ga0307509_10025961
575 Ga0307508_10005163
576 Ga0307410_10005089
577 Ga0307407_10040152
578 Ga0307409_100011144
579 Ga0307416_100022682
580 Ga0307414_10016132
581 Ga0307414_10034076
582 Ga0307415_100028041
583 Ga0307507_10000023
584 Ga0307510_10004918
585 Ga0395899_0032886
586 Ga0395900_0000194
587 Ga0395900_0019112
588 Ga0395898_0374360
589 Ga0395905_0000355
590 Ga0395905_0041125
591 Ga0395905_0049241
592 Ga0395901_0007458
593 Ga0451849_0626476
594 Ga0451853_3635811
595 Ga0451577_0029767
596 Ga0453684_0016145
597 Ga0466971_0041361
598 Ga0451576_0049935
599 Ga0495585_0000456
600 Ga0495606_0007282
601 Ga0495643_0000008
602 Ga0495648_0008886
603 Ga0495633_0000273
604 Ga0495633_0062608
605 Ga0495611_0000038
606 Ga0495611_0003632
607 Ga0495625_0001303
608 Ga0495658_0012096
609 Ga0495649_0016099
610 Ga0495674_0047388
611 Ga0495687_001711
612 Ga0495686_0001370
613 Ga0495686_0003606
614 Ga0495614_0028162
615 Ga0496105_0072909
616 Ga0496108_0044125
617 Ga0496124_0035032
618 Ga0501032_0005804
619 Ga0501034_0013745
620 Ga0501037_0054882
621 Ga0501037_0058495
622 Ga0501043_0006098
623 Ga0501046_0008803
624 Ga0501047_0015834
625 Ga0501048_0014354
626 Ga0501070_0046362
627 Ga0501070_0077728
628 Ga0501073_0133952
629 Ga0501074_0000729
630 Ga0501217_004158
631 Ga0501083_0004538
632 Ga0501035_0082549
633 Ga0501044_0055662
634 Ga0501044_0087779
635 Ga0501044_0130123
636 nmdc:mga0k408_237_c1
637 nmdc:mga09592_59273_c1
638 nmdc:mga0qj67_56379_c1
639 nmdc:mga06r32_129860_c1
640 nmdc:mga08y16_10287_c1
641 nmdc:mga08y16_66650_c1
642 Ga0500635_0001067
643 Ga0500594_0006756
644 Ga0500628_007561
645 Ga0500616_0002678
646 Ga0500616_0005856
647 Ga0500611_000064
648 2522549343
649 2819590785
650 2839991975
651 2852624893
652 2884936211

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00324

AA_permease

Amino acid permease

43

509

0.84

PF13520

AA_permease_2

Amino acid permease

39

507

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7dsk-assembly1.cif.gz_B overall structure of the lat1-4f2hc bound with jx-075 0.9125 8 473
3ob6-assembly1.cif.gz_A structure of adic(n101a) in the open-to-out arg+ bound conformation 0.8858 14 473
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.8818 19 468
3ob6-assembly1.cif.gz_B structure of adic(n101a) in the open-to-out arg+ bound conformation 0.8757 14 473
5j4i-assembly1.cif.gz_A crystal structure of the l-arginine/agmatine antiporter from e. coli at 2.2 angstroem resolution 0.8752 14 473
ID Description Score Start End Superfamily
af_D4ADU2_38_483_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.935 10 473 1.20.1740.10
af_Q2FYJ4_6_440_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.933 9 470 1.20.1740.10
af_Q2FYJ4_6_440_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9288 9 470 1.20.1740.10
af_Q8IR48_79_518_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9251 10 463 1.20.1740.10
af_P45539_5_443_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9232 9 470 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A7W0N6M5-F1-model_v4 Amino acid permease 0.9544 1 470 GO:0005886
GO:0015179
AF-A0A1N6RVF3-F1-model_v4 Amino acid/polyamine/organocation transporter, APC superfamily 0.9495 22 469 GO:0005886
GO:0015179
AF-A0A1M5UEQ1-F1-model_v4 Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) 0.9486 5 467 GO:0005886
GO:0015179
AF-A0A7X4IRP4-F1-model_v4 Amino acid permease 0.9469 8 455 GO:0005886
GO:0015179
AF-A0A2G9LV58-F1-model_v4 Amino acid permease 0.9419 8 379 GO:0005886
GO:0022857

Map