F407912

General Info

Members Datasets Scaffolds Average Seq Length
325 153 650 91

Family's Representative Sequence

Representative Sequence 3300035172|Ga0373955_0614825|Ga0373955_0614825_199_498
Length 99
Sequence MAVFHVKKGDEVVIIAGADRGKRGKIISVAPKAQRVIVEGARMIKKHMRKSQQHPQGAIVEREGTVHISNVMKAEQFDTRAAKHGSAAPAEATAAPAQE

Samples

Sample ID Description Type Environment
1 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
70 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
71 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
72 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
73 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
74 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
75 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
76 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
80 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
81 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
82 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
96 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
97 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
98 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
99 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
100 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
101 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
102 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
103 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300041461 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaT Metatranscriptome Rhizoplane
111 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
112 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
113 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
114 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
115 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
116 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
120 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
121 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
122 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
123 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
124 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
125 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
126 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
127 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
128 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
129 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
130 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
131 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
132 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
133 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
134 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
135 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
136 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
139 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
140 3300049545 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
153 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.08
Metatranscriptomes 0.92
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.62
Rhizosphere 98.15
Stem 0
Stem Tuber 0
Unclassified 2.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373955_0614825 3300035172 Bacteria 666
2 Ga0070683_100067211 3300005329 Bacteria 3339
3 Ga0070683_101673740 3300005329 Bacteria 612
4 Ga0070690_100066157 3300005330 Bacteria 2339
5 Ga0070670_100499213 3300005331 Bacteria 1082
6 Ga0068868_100813455 3300005338 Bacteria 844
7 Ga0070689_100040504 3300005340 Bacteria 3573
8 Ga0070689_100332764 3300005340 Bacteria 1270
9 Ga0070675_101049013 3300005354 Bacteria 749
10 Ga0070673_101577918 3300005364 Bacteria 620
11 Ga0070688_100207079 3300005365 Bacteria 1375
12 Ga0070688_100487286 3300005365 Bacteria 928
13 Ga0070709_10136686 3300005434 Bacteria 1679
14 Ga0070700_101850177 3300005441 Bacteria 521
15 Ga0070694_100929412 3300005444 Bacteria 719
16 Ga0068867_102247793 3300005459 Bacteria 518
17 Ga0070685_10175187 3300005466 Bacteria 1377
18 Ga0070684_100455162 3300005535 Bacteria 1183
19 Ga0070697_101536537 3300005536 Bacteria 595
20 Ga0070672_102044243 3300005543 Bacteria 516
21 Ga0070686_100046755 3300005544 Bacteria 2733
22 Ga0070695_100748440 3300005545 Bacteria 779
23 Ga0070695_101086188 3300005545 Bacteria 654
24 Ga0070695_101743627 3300005545 Bacteria 522
25 Ga0070693_100424088 3300005547 Bacteria 928
26 Ga0070704_100417107 3300005549 Bacteria 1149
27 Ga0070704_100601978 3300005549 Unclassified 966
28 Ga0070704_101703885 3300005549 Bacteria 582
29 Ga0068855_100031040 3300005563 Bacteria 6386
30 Ga0068857_100001295 3300005577 Bacteria 19638
31 Ga0068856_100123991 3300005614 Bacteria 2586
32 Ga0068861_101077831 3300005719 Bacteria 771
33 Ga0068861_101399984 3300005719 Bacteria 683
34 Ga0068863_100644749 3300005841 Bacteria 1050
35 Ga0070715_10814520 3300006163 Bacteria 568
36 Ga0070716_101086016 3300006173 Bacteria 637
37 Ga0068871_101986091 3300006358 Bacteria 554
38 Ga0075428_100001579 3300006844 Bacteria 24421
39 Ga0075428_100193002 3300006844 Bacteria 2203
40 Ga0075430_100210915 3300006846 Bacteria 1612
41 Ga0075431_100129860 3300006847 Bacteria 2599
42 Ga0075431_100484704 3300006847 Bacteria 1229
43 Ga0075431_101818812 3300006847 Bacteria 565
44 Ga0075433_10265559 3300006852 Bacteria 1521
45 Ga0075433_11813871 3300006852 Bacteria 524
46 Ga0075434_100243765 3300006871 Bacteria 1817
47 Ga0075434_100636193 3300006871 Bacteria 1085
48 Ga0075429_101004012 3300006880 Bacteria 730
49 Ga0099795_10118077 3300007788 Bacteria 1058
50 Ga0105240_10002554 3300009093 Bacteria 29189
51 Ga0111539_10011660 3300009094 Bacteria 11024
52 Ga0111539_10164826 3300009094 Bacteria 2592
53 Ga0111539_10879529 3300009094 Bacteria 1042
54 Ga0114129_12933741 3300009147 Bacteria 563
55 Ga0105237_11731891 3300009545 Bacteria 632
56 Ga0099796_10166593 3300010159 Bacteria 877
57 Ga0105246_11177214 3300011119 Bacteria 704
58 Ga0157369_10044058 3300013105 Bacteria 4859
59 Ga0157374_12235129 3300013296 Bacteria 574
60 Ga0157378_10985334 3300013297 Bacteria 877
61 Ga0157378_12595931 3300013297 Bacteria 559
62 Ga0157375_10275960 3300013308 Bacteria 1843
63 Ga0157375_10516732 3300013308 Unclassified 1358
64 Ga0163163_10254737 3300014325 Bacteria 1806
65 Ga0157380_10158710 3300014326 Bacteria 1963
66 Ga0157377_10987033 3300014745 Bacteria 637
67 Ga0157377_11375615 3300014745 Bacteria 555
68 Ga0157379_10762543 3300014968 Bacteria 911
69 Ga0157376_12013985 3300014969 Unclassified 615
70 Ga0207685_10478381 3300025905 Bacteria 652
71 Ga0207699_10136738 3300025906 Bacteria 1606
72 Ga0207684_10516484 3300025910 Bacteria 1023
73 Ga0207695_10002221 3300025913 Bacteria 29193
74 Ga0207650_11371732 3300025925 Bacteria 601
75 Ga0207670_10048082 3300025936 Bacteria 2844
76 Ga0207670_10415241 3300025936 Bacteria 1079
77 Ga0207670_10482303 3300025936 Unclassified 1004
78 Ga0207689_11470379 3300025942 Bacteria 570
79 Ga0207689_11782948 3300025942 Bacteria 508
80 Ga0207661_10174299 3300025944 Bacteria 1874
81 Ga0207667_10025777 3300025949 Bacteria 6432
82 Ga0207703_11452147 3300026035 Bacteria 660
83 Ga0207708_10946354 3300026075 Bacteria 747
84 Ga0207702_10428424 3300026078 Bacteria 1280
85 Ga0207641_10455377 3300026088 Bacteria 1237
86 Ga0207676_10627767 3300026095 Bacteria 1035
87 Ga0207676_11291990 3300026095 Bacteria 724
88 Ga0207674_10003110 3300026116 Bacteria 20480
89 Ga0207675_100518961 3300026118 Bacteria 1187
90 Ga0207675_101763064 3300026118 Unclassified 639
91 Ga0268265_10992048 3300028380 Bacteria 829
92 Ga0265337_1000857 3300028556 Bacteria 15970
93 Ga0265337_1001120 3300028556 Bacteria 13707
94 Ga0265337_1002361 3300028556 Bacteria 8716
95 Ga0265337_1002821 3300028556 Bacteria 7772
96 Ga0265326_10001638 3300028558 Bacteria 7751
97 Ga0265326_10010563 3300028558 Bacteria 2736
98 Ga0265326_10054906 3300028558 Bacteria 1127
99 Ga0265326_10081567 3300028558 Bacteria 915
100 Ga0265326_10116229 3300028558 Bacteria 760
101 Ga0265326_10218246 3300028558 Bacteria 549
102 Ga0265326_10227542 3300028558 Bacteria 537
103 Ga0265319_1000019 3300028563 Bacteria 154537
104 Ga0265319_1003969 3300028563 Bacteria 7508
105 Ga0265319_1023516 3300028563 Bacteria 2233
106 Ga0265319_1027365 3300028563 Bacteria 2023
107 Ga0265319_1073496 3300028563 Bacteria 1093
108 Ga0265334_10019219 3300028573 Bacteria 2814
109 Ga0265334_10103480 3300028573 Bacteria 1028
110 Ga0265334_10203605 3300028573 Bacteria 687
111 Ga0265334_10236991 3300028573 Bacteria 629
112 Ga0265318_10005117 3300028577 Bacteria 6205
113 Ga0265318_10041381 3300028577 Bacteria 1752
114 Ga0265318_10102999 3300028577 Bacteria 1050
115 Ga0265318_10244781 3300028577 Bacteria 654
116 Ga0265323_10000005 3300028653 Bacteria 196003
117 Ga0265323_10000542 3300028653 Bacteria 20950
118 Ga0265323_10000705 3300028653 Bacteria 18171
119 Ga0265323_10004630 3300028653 Bacteria 5909
120 Ga0265323_10029649 3300028653 Bacteria 2045
121 Ga0265323_10090383 3300028653 Bacteria 1024
122 Ga0265323_10115192 3300028653 Bacteria 879
123 Ga0265323_10151865 3300028653 Bacteria 741
124 Ga0265322_10000766 3300028654 Bacteria 11593
125 Ga0265322_10000837 3300028654 Bacteria 11000
126 Ga0265322_10018830 3300028654 Bacteria 1982
127 Ga0265322_10184515 3300028654 Bacteria 597
128 Ga0265336_10000642 3300028666 Bacteria 19093
129 Ga0265336_10005187 3300028666 Bacteria 4837
130 Ga0265336_10007611 3300028666 Bacteria 3846
131 Ga0265336_10010005 3300028666 Bacteria 3257
132 Ga0307515_10226254 3300028794 Bacteria 1675
133 Ga0265338_10000105 3300028800 Bacteria 156108
134 Ga0265338_10000135 3300028800 Bacteria 135743
135 Ga0265338_10000987 3300028800 Bacteria 47972
136 Ga0265338_10001708 3300028800 Bacteria 34832
137 Ga0265338_10008597 3300028800 Bacteria 12354
138 Ga0265338_10008694 3300028800 Bacteria 12279
139 Ga0265338_10027677 3300028800 Bacteria 5680
140 Ga0265338_10044480 3300028800 Bacteria 4098
141 Ga0265338_10049891 3300028800 Bacteria 3788
142 Ga0265338_10050202 3300028800 Bacteria 3773
143 Ga0265338_10094870 3300028800 Bacteria 2453
144 Ga0265338_10127802 3300028800 Bacteria 2013
145 Ga0265338_10143088 3300028800 Bacteria 1870
146 Ga0265338_10319794 3300028800 Bacteria 1123
147 Ga0265338_10548845 3300028800 Bacteria 809
148 Ga0265338_10585713 3300028800 Bacteria 778
149 Ga0265338_10801049 3300028800 Bacteria 646
150 Ga0265324_10000442 3300029957 Bacteria 29455
151 Ga0265324_10005858 3300029957 Bacteria 5227
152 Ga0265324_10061662 3300029957 Bacteria 1281
153 Ga0265324_10094659 3300029957 Bacteria 1016
154 Ga0265330_10125823 3300031235 Bacteria 1091
155 Ga0265330_10127121 3300031235 Bacteria 1085
156 Ga0265330_10149537 3300031235 Bacteria 992
157 Ga0265330_10481534 3300031235 Bacteria 527
158 Ga0265332_10037602 3300031238 Bacteria 2099
159 Ga0265332_10133467 3300031238 Bacteria 1041
160 Ga0265332_10154864 3300031238 Bacteria 958
161 Ga0265332_10305837 3300031238 Unclassified 656
162 Ga0265328_10007527 3300031239 Bacteria 4535
163 Ga0265328_10050124 3300031239 Bacteria 1533
164 Ga0265328_10206201 3300031239 Bacteria 747
165 Ga0265328_10454271 3300031239 Bacteria 507
166 Ga0265320_10000391 3300031240 Bacteria 35502
167 Ga0265320_10000990 3300031240 Bacteria 21089
168 Ga0265320_10001599 3300031240 Bacteria 16249
169 Ga0265320_10002251 3300031240 Bacteria 13551
170 Ga0265320_10013897 3300031240 Bacteria 4613
171 Ga0265320_10018307 3300031240 Bacteria 3861
172 Ga0265320_10032443 3300031240 Bacteria 2673
173 Ga0265320_10050473 3300031240 Bacteria 2021
174 Ga0265320_10072527 3300031240 Bacteria 1620
175 Ga0265320_10104605 3300031240 Bacteria 1301
176 Ga0265320_10120631 3300031240 Bacteria 1196
177 Ga0265320_10527667 3300031240 Bacteria 522
178 Ga0265325_10029938 3300031241 Bacteria 2923
179 Ga0265325_10030183 3300031241 Bacteria 2909
180 Ga0265325_10169241 3300031241 Bacteria 1024
181 Ga0265329_10058574 3300031242 Bacteria 1220
182 Ga0265340_10010599 3300031247 Bacteria 4928
183 Ga0265340_10023043 3300031247 Bacteria 3177
184 Ga0265340_10037337 3300031247 Bacteria 2407
185 Ga0265340_10218178 3300031247 Bacteria 855
186 Ga0265340_10299407 3300031247 Bacteria 713
187 Ga0265340_10514236 3300031247 Bacteria 527
188 Ga0265339_10029749 3300031249 Bacteria 3097
189 Ga0265339_10077133 3300031249 Bacteria 1766
190 Ga0265339_10361723 3300031249 Bacteria 682
191 Ga0265331_10034609 3300031250 Bacteria 2490
192 Ga0265327_10002314 3300031251 Bacteria 20368
193 Ga0265327_10006465 3300031251 Bacteria 9359
194 Ga0265327_10099123 3300031251 Bacteria 1409
195 Ga0265316_10001559 3300031344 Bacteria 24560
196 Ga0265316_10006649 3300031344 Bacteria 11011
197 Ga0265316_10017230 3300031344 Bacteria 6249
198 Ga0265316_10021617 3300031344 Bacteria 5444
199 Ga0265316_10185401 3300031344 Bacteria 1548
200 Ga0265316_10231235 3300031344 Bacteria 1361
201 Ga0265316_10296577 3300031344 Bacteria 1178
202 Ga0265316_10478883 3300031344 Bacteria 891
203 Ga0265316_10544474 3300031344 Bacteria 826
204 Ga0265316_10889626 3300031344 Bacteria 622
205 Ga0307408_100245231 3300031548 Bacteria 1475
206 Ga0265313_10000016 3300031595 Bacteria 154004
207 Ga0265313_10000967 3300031595 Bacteria 28455
208 Ga0265313_10054472 3300031595 Bacteria 1899
209 Ga0265314_10003246 3300031711 Bacteria 15899
210 Ga0265314_10074450 3300031711 Bacteria 2262
211 Ga0265314_10092900 3300031711 Bacteria 1960
212 Ga0265314_10174091 3300031711 Bacteria 1296
213 Ga0265314_10207188 3300031711 Bacteria 1154
214 Ga0265314_10282576 3300031711 Bacteria 938
215 Ga0265314_10480430 3300031711 Bacteria 657
216 Ga0265314_10716100 3300031711 Bacteria 505
217 Ga0265342_10011450 3300031712 Bacteria 6070
218 Ga0265342_10108381 3300031712 Bacteria 1574
219 Ga0265342_10153421 3300031712 Bacteria 1277
220 Ga0265342_10155620 3300031712 Bacteria 1267
221 Ga0265342_10175300 3300031712 Bacteria 1177
222 Ga0265342_10256452 3300031712 Bacteria 932
223 Ga0265342_10259378 3300031712 Bacteria 925
224 Ga0265342_10266767 3300031712 Bacteria 909
225 Ga0265342_10281360 3300031712 Bacteria 880
226 Ga0307413_11503831 3300031824 Bacteria 595
227 Ga0307414_10102967 3300032004 Bacteria 2153
228 Ga0307411_10984710 3300032005 Bacteria 754
229 Ga0373934_0152429 3300035086 Bacteria 947
230 Ga0373951_0075562 3300035091 Bacteria 864
231 Ga0373923_0277113 3300035111 Bacteria 790
232 Ga0373960_0152723 3300035121 Bacteria 790
233 Ga0373961_0340169 3300035241 Bacteria 564
234 Ga0373931_0599143 3300035691 Bacteria 720
235 Ga0373935_0202219 3300035692 Bacteria 1373
236 Ga0373935_0783019 3300035692 Bacteria 704
237 Ga0373927_0203115 3300035695 Bacteria 1301
238 Ga0373933_0137097 3300035724 Bacteria 1542
239 Ga0373937_0885119 3300036401 Bacteria 842
240 Ga0373937_1038919 3300036401 Bacteria 768
241 Ga0373937_1172278 3300036401 Bacteria 717
242 Ga0373925_0904364 3300037068 Bacteria 727
243 Ga0395905_0104459 3300037471 Bacteria 2660
244 Ga0451805_047864 3300041461 Bacteria 669
245 Ga0451804_0681992 3300041463 Bacteria 751
246 Ga0451833_1178755 3300041491 Bacteria 516
247 Ga0451835_0617817 3300041492 Bacteria 602
248 Ga0451839_0226159 3300041496 Bacteria 536
249 Ga0451577_0060938 3300042876 Bacteria 3364
250 Ga0451577_0095341 3300042876 Bacteria 2657
251 Ga0451577_0123421 3300042876 Bacteria 2320
252 Ga0451577_0286087 3300042876 Bacteria 1494
253 Ga0451577_0440673 3300042876 Bacteria 1183
254 Ga0451577_0452158 3300042876 Bacteria 1166
255 Ga0451577_0599523 3300042876 Bacteria 1000
256 Ga0451577_2007960 3300042876 Bacteria 505
257 Ga0453683_0126094 3300044673 Bacteria 1612
258 Ga0453684_0000532 3300044712 Bacteria 145255
259 Ga0453684_0018447 3300044712 Bacteria 10709
260 Ga0453684_0949217 3300044712 Bacteria 918
261 Ga0453684_1102938 3300044712 Bacteria 838
262 Ga0453684_2254306 3300044712 Unclassified 543
263 Ga0451576_0063827 3300045051 Bacteria 3838
264 Ga0451576_0071392 3300045051 Bacteria 3614
265 Ga0451576_0107450 3300045051 Bacteria 2903
266 Ga0451576_0138936 3300045051 Bacteria 2534
267 Ga0451576_0185338 3300045051 Bacteria 2173
268 Ga0451576_0283922 3300045051 Bacteria 1731
269 Ga0451576_0313885 3300045051 Bacteria 1640
270 Ga0451576_0401393 3300045051 Bacteria 1437
271 Ga0451576_0960080 3300045051 Bacteria 896
272 Ga0451576_1136608 3300045051 Bacteria 817
273 Ga0451576_1624986 3300045051 Bacteria 670
274 Ga0495592_0370948 3300046454 Bacteria 913
275 Ga0495651_0521412 3300046462 Bacteria 758
276 Ga0495653_0094597 3300046463 Unclassified 2177
277 Ga0495653_0741106 3300046463 Bacteria 594
278 Ga0495664_0133998 3300046477 Bacteria 1501
279 Ga0495664_0662012 3300046477 Bacteria 618
280 Ga0495594_0881047 3300046499 Bacteria 503
281 Ga0495618_0796777 3300046514 Bacteria 550
282 Ga0495628_0531904 3300046516 Bacteria 846
283 Ga0495628_0803092 3300046516 Bacteria 658
284 Ga0495630_0315808 3300046517 Bacteria 1194
285 Ga0495630_0337163 3300046517 Bacteria 1153
286 Ga0495630_0683102 3300046517 Bacteria 786
287 Ga0495630_0974682 3300046517 Bacteria 645
288 Ga0495652_1151693 3300046529 Bacteria 502
289 Ga0495640_0315083 3300046533 Bacteria 970
290 Ga0495586_0053812 3300046535 Bacteria 2181
291 Ga0495586_0133968 3300046535 Bacteria 1388
292 Ga0495586_0853549 3300046535 Bacteria 525
293 Ga0495587_0435438 3300046536 Bacteria 727
294 Ga0495645_0029157 3300046543 Bacteria 4012
295 Ga0495645_0443670 3300046543 Bacteria 820
296 Ga0495645_0858546 3300046543 Bacteria 541
297 Ga0495667_0984933 3300046559 Bacteria 515
298 Ga0495634_0354668 3300046642 Bacteria 878
299 Ga0495657_0076896 3300046675 Bacteria 2167
300 Ga0495599_0285827 3300046678 Bacteria 998
301 Ga0495599_0383015 3300046678 Bacteria 840
302 Ga0495624_0224922 3300046690 Bacteria 1137
303 Ga0495624_0682893 3300046690 Bacteria 610
304 Ga0495624_0840006 3300046690 Bacteria 542
305 Ga0495674_0124520 3300047319 Bacteria 2176
306 Ga0495675_0529016 3300047444 Bacteria 674
307 Ga0495614_0405467 3300048089 Bacteria 641
308 Ga0501329_16158 3300049545 Bacteria 510
309 Ga0501043_0469478 3300049579 Bacteria 943
310 Ga0501047_0147098 3300049581 Bacteria 2232
311 Ga0501070_0056055 3300049586 Bacteria 3267
312 Ga0501080_1344890 3300049742 Bacteria 611
313 Ga0501204_065862 3300049850 Bacteria 587
314 nmdc:mga09592_632343_c1 3300050508 Bacteria 915
315 nmdc:mga0qj67_1187173_c1 3300050509 Bacteria 594
316 nmdc:mga06r32_255933_c1 3300050510 Bacteria 1019
317 nmdc:mga06r32_719882_c1 3300050510 Bacteria 963
318 nmdc:mga08y16_254661_c1 3300050511 Bacteria 1814
319 nmdc:mga08y16_492918_c1 3300050511 Bacteria 1246
320 nmdc:mga08y16_531982_c1 3300050511 Bacteria 1191
321 nmdc:mga0n895_238987_c1 3300050512 Bacteria 1843
322 nmdc:mga0n895_617814_c1 3300050512 Bacteria 1085
323 Ga0495601_0251155 3300053077 Bacteria 1155
324 Ga0495619_0916858 3300053085 Bacteria 589
325 Ga0587072_146965 3300059643 Unclassified 566
326 Ga0373955_0614825
327 Ga0070683_100067211
328 Ga0070683_101673740
329 Ga0070690_100066157
330 Ga0070670_100499213
331 Ga0068868_100813455
332 Ga0070689_100040504
333 Ga0070689_100332764
334 Ga0070675_101049013
335 Ga0070673_101577918
336 Ga0070688_100207079
337 Ga0070688_100487286
338 Ga0070709_10136686
339 Ga0070700_101850177
340 Ga0070694_100929412
341 Ga0068867_102247793
342 Ga0070685_10175187
343 Ga0070684_100455162
344 Ga0070697_101536537
345 Ga0070672_102044243
346 Ga0070686_100046755
347 Ga0070695_100748440
348 Ga0070695_101086188
349 Ga0070695_101743627
350 Ga0070693_100424088
351 Ga0070704_100417107
352 Ga0070704_100601978
353 Ga0070704_101703885
354 Ga0068855_100031040
355 Ga0068857_100001295
356 Ga0068856_100123991
357 Ga0068861_101077831
358 Ga0068861_101399984
359 Ga0068863_100644749
360 Ga0070715_10814520
361 Ga0070716_101086016
362 Ga0068871_101986091
363 Ga0075428_100001579
364 Ga0075428_100193002
365 Ga0075430_100210915
366 Ga0075431_100129860
367 Ga0075431_100484704
368 Ga0075431_101818812
369 Ga0075433_10265559
370 Ga0075433_11813871
371 Ga0075434_100243765
372 Ga0075434_100636193
373 Ga0075429_101004012
374 Ga0099795_10118077
375 Ga0105240_10002554
376 Ga0111539_10011660
377 Ga0111539_10164826
378 Ga0111539_10879529
379 Ga0114129_12933741
380 Ga0105237_11731891
381 Ga0099796_10166593
382 Ga0105246_11177214
383 Ga0157369_10044058
384 Ga0157374_12235129
385 Ga0157378_10985334
386 Ga0157378_12595931
387 Ga0157375_10275960
388 Ga0157375_10516732
389 Ga0163163_10254737
390 Ga0157380_10158710
391 Ga0157377_10987033
392 Ga0157377_11375615
393 Ga0157379_10762543
394 Ga0157376_12013985
395 Ga0207685_10478381
396 Ga0207699_10136738
397 Ga0207684_10516484
398 Ga0207695_10002221
399 Ga0207650_11371732
400 Ga0207670_10048082
401 Ga0207670_10415241
402 Ga0207670_10482303
403 Ga0207689_11470379
404 Ga0207689_11782948
405 Ga0207661_10174299
406 Ga0207667_10025777
407 Ga0207703_11452147
408 Ga0207708_10946354
409 Ga0207702_10428424
410 Ga0207641_10455377
411 Ga0207676_10627767
412 Ga0207676_11291990
413 Ga0207674_10003110
414 Ga0207675_100518961
415 Ga0207675_101763064
416 Ga0268265_10992048
417 Ga0265337_1000857
418 Ga0265337_1001120
419 Ga0265337_1002361
420 Ga0265337_1002821
421 Ga0265326_10001638
422 Ga0265326_10010563
423 Ga0265326_10054906
424 Ga0265326_10081567
425 Ga0265326_10116229
426 Ga0265326_10218246
427 Ga0265326_10227542
428 Ga0265319_1000019
429 Ga0265319_1003969
430 Ga0265319_1023516
431 Ga0265319_1027365
432 Ga0265319_1073496
433 Ga0265334_10019219
434 Ga0265334_10103480
435 Ga0265334_10203605
436 Ga0265334_10236991
437 Ga0265318_10005117
438 Ga0265318_10041381
439 Ga0265318_10102999
440 Ga0265318_10244781
441 Ga0265323_10000005
442 Ga0265323_10000542
443 Ga0265323_10000705
444 Ga0265323_10004630
445 Ga0265323_10029649
446 Ga0265323_10090383
447 Ga0265323_10115192
448 Ga0265323_10151865
449 Ga0265322_10000766
450 Ga0265322_10000837
451 Ga0265322_10018830
452 Ga0265322_10184515
453 Ga0265336_10000642
454 Ga0265336_10005187
455 Ga0265336_10007611
456 Ga0265336_10010005
457 Ga0307515_10226254
458 Ga0265338_10000105
459 Ga0265338_10000135
460 Ga0265338_10000987
461 Ga0265338_10001708
462 Ga0265338_10008597
463 Ga0265338_10008694
464 Ga0265338_10027677
465 Ga0265338_10044480
466 Ga0265338_10049891
467 Ga0265338_10050202
468 Ga0265338_10094870
469 Ga0265338_10127802
470 Ga0265338_10143088
471 Ga0265338_10319794
472 Ga0265338_10548845
473 Ga0265338_10585713
474 Ga0265338_10801049
475 Ga0265324_10000442
476 Ga0265324_10005858
477 Ga0265324_10061662
478 Ga0265324_10094659
479 Ga0265330_10125823
480 Ga0265330_10127121
481 Ga0265330_10149537
482 Ga0265330_10481534
483 Ga0265332_10037602
484 Ga0265332_10133467
485 Ga0265332_10154864
486 Ga0265332_10305837
487 Ga0265328_10007527
488 Ga0265328_10050124
489 Ga0265328_10206201
490 Ga0265328_10454271
491 Ga0265320_10000391
492 Ga0265320_10000990
493 Ga0265320_10001599
494 Ga0265320_10002251
495 Ga0265320_10013897
496 Ga0265320_10018307
497 Ga0265320_10032443
498 Ga0265320_10050473
499 Ga0265320_10072527
500 Ga0265320_10104605
501 Ga0265320_10120631
502 Ga0265320_10527667
503 Ga0265325_10029938
504 Ga0265325_10030183
505 Ga0265325_10169241
506 Ga0265329_10058574
507 Ga0265340_10010599
508 Ga0265340_10023043
509 Ga0265340_10037337
510 Ga0265340_10218178
511 Ga0265340_10299407
512 Ga0265340_10514236
513 Ga0265339_10029749
514 Ga0265339_10077133
515 Ga0265339_10361723
516 Ga0265331_10034609
517 Ga0265327_10002314
518 Ga0265327_10006465
519 Ga0265327_10099123
520 Ga0265316_10001559
521 Ga0265316_10006649
522 Ga0265316_10017230
523 Ga0265316_10021617
524 Ga0265316_10185401
525 Ga0265316_10231235
526 Ga0265316_10296577
527 Ga0265316_10478883
528 Ga0265316_10544474
529 Ga0265316_10889626
530 Ga0307408_100245231
531 Ga0265313_10000016
532 Ga0265313_10000967
533 Ga0265313_10054472
534 Ga0265314_10003246
535 Ga0265314_10074450
536 Ga0265314_10092900
537 Ga0265314_10174091
538 Ga0265314_10207188
539 Ga0265314_10282576
540 Ga0265314_10480430
541 Ga0265314_10716100
542 Ga0265342_10011450
543 Ga0265342_10108381
544 Ga0265342_10153421
545 Ga0265342_10155620
546 Ga0265342_10175300
547 Ga0265342_10256452
548 Ga0265342_10259378
549 Ga0265342_10266767
550 Ga0265342_10281360
551 Ga0307413_11503831
552 Ga0307414_10102967
553 Ga0307411_10984710
554 Ga0373934_0152429
555 Ga0373951_0075562
556 Ga0373923_0277113
557 Ga0373960_0152723
558 Ga0373961_0340169
559 Ga0373931_0599143
560 Ga0373935_0202219
561 Ga0373935_0783019
562 Ga0373927_0203115
563 Ga0373933_0137097
564 Ga0373937_0885119
565 Ga0373937_1038919
566 Ga0373937_1172278
567 Ga0373925_0904364
568 Ga0395905_0104459
569 Ga0451805_047864
570 Ga0451804_0681992
571 Ga0451833_1178755
572 Ga0451835_0617817
573 Ga0451839_0226159
574 Ga0451577_0060938
575 Ga0451577_0095341
576 Ga0451577_0123421
577 Ga0451577_0286087
578 Ga0451577_0440673
579 Ga0451577_0452158
580 Ga0451577_0599523
581 Ga0451577_2007960
582 Ga0453683_0126094
583 Ga0453684_0000532
584 Ga0453684_0018447
585 Ga0453684_0949217
586 Ga0453684_1102938
587 Ga0453684_2254306
588 Ga0451576_0063827
589 Ga0451576_0071392
590 Ga0451576_0107450
591 Ga0451576_0138936
592 Ga0451576_0185338
593 Ga0451576_0283922
594 Ga0451576_0313885
595 Ga0451576_0401393
596 Ga0451576_0960080
597 Ga0451576_1136608
598 Ga0451576_1624986
599 Ga0495592_0370948
600 Ga0495651_0521412
601 Ga0495653_0094597
602 Ga0495653_0741106
603 Ga0495664_0133998
604 Ga0495664_0662012
605 Ga0495594_0881047
606 Ga0495618_0796777
607 Ga0495628_0531904
608 Ga0495628_0803092
609 Ga0495630_0315808
610 Ga0495630_0337163
611 Ga0495630_0683102
612 Ga0495630_0974682
613 Ga0495652_1151693
614 Ga0495640_0315083
615 Ga0495586_0053812
616 Ga0495586_0133968
617 Ga0495586_0853549
618 Ga0495587_0435438
619 Ga0495645_0029157
620 Ga0495645_0443670
621 Ga0495645_0858546
622 Ga0495667_0984933
623 Ga0495634_0354668
624 Ga0495657_0076896
625 Ga0495599_0285827
626 Ga0495599_0383015
627 Ga0495624_0224922
628 Ga0495624_0682893
629 Ga0495624_0840006
630 Ga0495674_0124520
631 Ga0495675_0529016
632 Ga0495614_0405467
633 Ga0501329_16158
634 Ga0501043_0469478
635 Ga0501047_0147098
636 Ga0501070_0056055
637 Ga0501080_1344890
638 Ga0501204_065862
639 nmdc:mga09592_632343_c1
640 nmdc:mga0qj67_1187173_c1
641 nmdc:mga06r32_255933_c1
642 nmdc:mga06r32_719882_c1
643 nmdc:mga08y16_254661_c1
644 nmdc:mga08y16_492918_c1
645 nmdc:mga08y16_531982_c1
646 nmdc:mga0n895_238987_c1
647 nmdc:mga0n895_617814_c1
648 Ga0495601_0251155
649 Ga0495619_0916858
650 Ga0587072_146965

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00467

KOW

KOW motif

8

39

0.97

PF17136

ribosomal_L24

Ribosomal proteins 50S L24/mitochondrial 39S L24

41

88

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ddg-assembly1.cif.gz_G structure of the 50s ribosomal subunit from methicillin resistant staphylococcus aureus in complex with the oxazolidinone antibiotic lzd-6 0.9394 6 74
6wru-assembly1.cif.gz_G structure of the 50s subunit of the ribosome from methicillin resistant staphylococcus aureus in complex with an isomer of the tedizolid 0.9368 6 74
7ttu-assembly1.cif.gz_G 50s ribosomal subunit from staphylococcus aureus (strain atcc43300) 0.9276 6 74
8cgk-assembly1.cif.gz_t lincomycin and avilamycin bound to the 50s subunit 0.9243 7 74
6wqn-assembly1.cif.gz_G structure of the 50s subunit of the ribosome from methicillin resistant staphylococcus aureus in complex with the antibiotic, contezolid 0.9187 6 74
ID Description Score Start End Superfamily
af_Q8I5H8_47_152_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.9198 5 74 2.30.30.30
af_Q653V9_69_173_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.9153 4 74 2.30.30.30
af_Q55DJ4_14_116_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.9144 2 74 2.30.30.30
af_Q4DXQ9_109_211_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.9066 7 74 2.30.30.30
af_C6SX56_4_111_2.30.30.30 Mainly Beta;Roll;SH3 type barrels.; 0.884 3 74 2.30.30.30
ID Description Score Start End GO Terms
AF-A0A1A9QE29-F1-model_v4 Large ribosomal subunit protein uL24 0.9482 7 74 GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904
AF-A0A2V5ZP29-F1-model_v4 Large ribosomal subunit protein uL24 0.9377 4 75 GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904
AF-A0A498IIN3-F1-model_v4 Protein kinase domain-containing protein 0.9312 4 74 GO:0003723
GO:0003735
GO:0004672
GO:0005524
GO:0005840
GO:0006412
GO:0016020
GO:1990904
AF-A0A2V3ISQ1-F1-model_v4 Large ribosomal subunit protein uL24c (50S ribosomal protein L24, chloroplastic) 0.9289 3 74 GO:0003723
GO:0003735
GO:0005840
GO:0006412
GO:1990904
AF-A0A4Q1C452-F1-model_v4 Large ribosomal subunit protein uL24 0.928 1 91 GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904

Map